View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2596_low_7 (Length: 324)

Name: NF2596_low_7
Description: NF2596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2596_low_7
NF2596_low_7
[»] chr2 (47 HSPs)
chr2 (64-324)||(12407271-12407528)
chr2 (64-324)||(16269582-16269839)
chr2 (64-324)||(24776246-24776503)
chr2 (65-324)||(14198639-14198894)
chr2 (64-324)||(31170686-31170943)
chr2 (56-324)||(1789325-1789590)
chr2 (65-324)||(44765667-44765923)
chr2 (64-320)||(35316953-35317206)
chr2 (64-324)||(305527-305786)
chr2 (64-324)||(22551825-22552082)
chr2 (75-324)||(32125152-32125401)
chr2 (68-324)||(5093109-5093352)
chr2 (64-320)||(43847537-43847790)
chr2 (115-324)||(20605178-20605384)
chr2 (64-229)||(20605043-20605209)
chr2 (64-154)||(9120059-9120149)
chr2 (50-320)||(28844433-28844699)
chr2 (57-318)||(7026487-7026746)
chr2 (67-324)||(33135517-33135771)
chr2 (67-324)||(26788678-26788934)
chr2 (64-316)||(26601270-26601519)
chr2 (68-320)||(28740349-28740598)
chr2 (67-154)||(3463565-3463652)
chr2 (54-143)||(378860-378949)
chr2 (251-324)||(9120201-9120274)
chr2 (57-143)||(215465-215551)
chr2 (254-324)||(10657484-10657554)
chr2 (254-324)||(18177345-18177415)
chr2 (254-324)||(25288237-25288307)
chr2 (64-153)||(19144915-19145004)
chr2 (57-141)||(43078559-43078643)
chr2 (255-318)||(379016-379079)
chr2 (255-318)||(13833490-13833553)
chr2 (58-143)||(18176474-18176559)
chr2 (67-129)||(43825085-43825147)
chr2 (81-154)||(10125521-10125594)
chr2 (254-318)||(3463750-3463814)
chr2 (67-143)||(13833662-13833738)
chr2 (268-324)||(43078655-43078711)
chr2 (258-307)||(3574929-3574978)
chr2 (91-143)||(3574765-3574817)
chr2 (254-298)||(21370638-21370682)
chr2 (65-143)||(3858191-3858269)
chr2 (64-142)||(39698603-39698681)
chr2 (254-307)||(6224626-6224679)
chr2 (90-147)||(8172054-8172111)
chr2 (258-298)||(10125378-10125418)
[»] chr7 (84 HSPs)
chr7 (58-324)||(30440681-30440944)
chr7 (62-324)||(43581149-43581408)
chr7 (57-324)||(973067-973332)
chr7 (64-324)||(44343455-44343712)
chr7 (60-324)||(47914153-47914414)
chr7 (57-316)||(31638759-31639015)
chr7 (62-320)||(47879057-47879312)
chr7 (64-320)||(34008906-34009157)
chr7 (64-324)||(18914794-18915051)
chr7 (57-324)||(12893292-12893556)
chr7 (66-324)||(20275322-20275577)
chr7 (67-324)||(7719319-7719574)
chr7 (64-324)||(40996708-40996966)
chr7 (65-324)||(32142976-32143235)
chr7 (66-316)||(727405-727653)
chr7 (67-324)||(29614823-29615077)
chr7 (115-324)||(34695215-34695421)
chr7 (64-233)||(8078286-8078457)
chr7 (207-324)||(7718421-7718534)
chr7 (61-154)||(39219561-39219654)
chr7 (64-154)||(34695122-34695212)
chr7 (67-324)||(9882295-9882549)
chr7 (67-324)||(23101185-23101439)
chr7 (67-324)||(28342234-28342488)
chr7 (253-324)||(43679491-43679562)
chr7 (67-324)||(33382524-33382778)
chr7 (67-324)||(39783986-39784240)
chr7 (67-154)||(43679363-43679451)
chr7 (254-324)||(10068538-10068608)
chr7 (67-324)||(12963589-12963842)
chr7 (80-316)||(19251439-19251672)
chr7 (207-324)||(39219436-39219548)
chr7 (254-324)||(3022997-3023067)
chr7 (67-324)||(18838276-18838530)
chr7 (253-324)||(7113529-7113600)
chr7 (82-154)||(10676604-10676676)
chr7 (67-147)||(29893010-29893090)
chr7 (67-147)||(43187576-43187656)
chr7 (254-318)||(44121965-44122029)
chr7 (67-324)||(7993029-7993283)
chr7 (255-318)||(29585586-29585649)
chr7 (90-318)||(37327837-37328062)
chr7 (254-324)||(8675404-8675474)
chr7 (254-324)||(28034864-28034934)
chr7 (64-133)||(9179767-9179836)
chr7 (54-143)||(17001260-17001349)
chr7 (88-318)||(40460772-40460999)
chr7 (255-324)||(43187416-43187485)
chr7 (254-318)||(509727-509791)
chr7 (67-143)||(21067769-21067845)
chr7 (67-311)||(3797129-3797370)
chr7 (269-324)||(41827390-41827445)
chr7 (254-324)||(12740444-12740513)
chr7 (254-324)||(25805763-25805833)
chr7 (254-324)||(32883853-32883923)
chr7 (69-320)||(46405494-46405742)
chr7 (58-143)||(48117830-48117915)
chr7 (67-143)||(509585-509661)
chr7 (75-154)||(7113358-7113437)
chr7 (55-119)||(31401579-31401642)
chr7 (67-139)||(33892492-33892564)
chr7 (67-143)||(37973011-37973087)
chr7 (67-154)||(10068353-10068440)
chr7 (257-316)||(10676487-10676546)
chr7 (69-147)||(29585446-29585524)
chr7 (91-318)||(39028008-39028232)
chr7 (254-324)||(44256825-44256895)
chr7 (254-307)||(17001099-17001152)
chr7 (67-147)||(47066631-47066712)
chr7 (254-307)||(47066775-47066828)
chr7 (269-324)||(37972926-37972981)
chr7 (90-141)||(41827224-41827275)
chr7 (254-324)||(1470293-1470362)
chr7 (64-142)||(48399727-48399805)
chr7 (90-143)||(3634239-3634292)
chr7 (90-143)||(34115478-34115531)
chr7 (80-132)||(12740273-12740325)
chr7 (58-134)||(32883659-32883735)
chr7 (254-318)||(33892315-33892379)
chr7 (67-143)||(42678199-42678275)
chr7 (254-313)||(447854-447913)
chr7 (170-237)||(29893072-29893139)
chr7 (64-134)||(31472028-31472098)
chr7 (170-237)||(44623418-44623485)
[»] chr5 (43 HSPs)
chr5 (56-324)||(21146949-21147214)
chr5 (55-324)||(33656100-33656368)
chr5 (60-324)||(6460678-6460939)
chr5 (63-324)||(27459009-27459266)
chr5 (64-324)||(32157956-32158215)
chr5 (92-324)||(139191-139420)
chr5 (55-154)||(7016923-7017021)
chr5 (56-324)||(14000164-14000429)
chr5 (170-324)||(5272978-5273128)
chr5 (67-324)||(1152162-1152416)
chr5 (211-324)||(7016798-7016907)
chr5 (67-318)||(4240517-4240765)
chr5 (56-145)||(43319128-43319218)
chr5 (58-320)||(4550320-4550579)
chr5 (207-324)||(849181-849294)
chr5 (66-154)||(5273187-5273276)
chr5 (67-307)||(37013807-37014044)
chr5 (254-324)||(13926008-13926078)
chr5 (65-154)||(16894086-16894174)
chr5 (66-147)||(9689553-9689633)
chr5 (254-318)||(5949185-5949249)
chr5 (258-320)||(7947636-7947698)
chr5 (254-320)||(14465290-14465356)
chr5 (254-324)||(39852422-39852492)
chr5 (258-318)||(1461203-1461263)
chr5 (258-323)||(22746378-22746443)
chr5 (90-143)||(26795638-26795691)
chr5 (67-143)||(7948554-7948630)
chr5 (63-134)||(27786209-27786280)
chr5 (90-143)||(26806702-26806755)
chr5 (258-318)||(40013767-40013827)
chr5 (90-145)||(1511587-1511642)
chr5 (80-141)||(28594449-28594511)
chr5 (86-141)||(9689343-9689398)
chr5 (67-133)||(22746190-22746256)
chr5 (208-324)||(9689693-9689804)
chr5 (207-237)||(16894044-16894074)
chr5 (109-146)||(849166-849203)
chr5 (90-143)||(2276210-2276263)
chr5 (90-143)||(13925847-13925900)
chr5 (105-154)||(14465452-14465501)
chr5 (71-139)||(5949006-5949074)
chr5 (91-143)||(26806581-26806633)
[»] chr1 (67 HSPs)
chr1 (64-324)||(21222031-21222287)
chr1 (64-324)||(35279555-35279812)
chr1 (64-324)||(45760069-45760327)
chr1 (64-324)||(49198329-49198584)
chr1 (64-324)||(28824433-28824689)
chr1 (58-324)||(50192610-50192874)
chr1 (64-324)||(49417967-49418224)
chr1 (64-324)||(730032-730289)
chr1 (64-324)||(6304312-6304571)
chr1 (56-324)||(35679188-35679453)
chr1 (66-320)||(47654415-47654669)
chr1 (64-237)||(953702-953876)
chr1 (64-237)||(22183253-22183427)
chr1 (64-316)||(33025395-33025645)
chr1 (56-154)||(47780494-47780592)
chr1 (115-324)||(19451868-19452074)
chr1 (69-324)||(48524208-48524459)
chr1 (54-324)||(6312447-6312714)
chr1 (56-324)||(32589013-32589279)
chr1 (64-154)||(19452077-19452167)
chr1 (115-324)||(47780644-47780851)
chr1 (164-324)||(45535928-45536084)
chr1 (67-324)||(25612043-25612297)
chr1 (64-195)||(14494095-14494224)
chr1 (79-324)||(29556006-29556244)
chr1 (67-324)||(29396448-29396702)
chr1 (58-324)||(9322560-9322823)
chr1 (69-324)||(28387453-28387705)
chr1 (254-324)||(31572257-31572327)
chr1 (70-324)||(46327931-46328182)
chr1 (254-324)||(51701650-51701720)
chr1 (74-139)||(31572405-31572470)
chr1 (67-324)||(15835113-15835367)
chr1 (254-324)||(48177522-48177592)
chr1 (70-307)||(18798380-18798614)
chr1 (257-316)||(955823-955882)
chr1 (258-324)||(9577492-9577558)
chr1 (254-318)||(29219356-29219420)
chr1 (53-298)||(49230758-49231000)
chr1 (64-114)||(28541387-28541437)
chr1 (67-143)||(5495334-5495410)
chr1 (67-143)||(8141366-8141442)
chr1 (67-151)||(9577662-9577746)
chr1 (254-318)||(38536155-38536219)
chr1 (254-318)||(38558373-38558437)
chr1 (67-143)||(45272473-45272549)
chr1 (56-143)||(29219163-29219250)
chr1 (64-143)||(42657714-42657793)
chr1 (60-143)||(51826841-51826924)
chr1 (254-320)||(51085865-51085931)
chr1 (90-143)||(19007584-19007637)
chr1 (54-139)||(19893441-19893526)
chr1 (74-143)||(25831144-25831213)
chr1 (57-139)||(27198264-27198346)
chr1 (69-139)||(42290732-42290802)
chr1 (90-147)||(38536281-38536338)
chr1 (90-147)||(38558499-38558556)
chr1 (90-143)||(48194616-48194669)
chr1 (90-143)||(48203374-48203427)
chr1 (67-151)||(48177692-48177776)
chr1 (115-154)||(47780598-47780637)
chr1 (257-307)||(31622536-31622586)
chr1 (258-324)||(37014700-37014766)
chr1 (271-317)||(43885157-43885203)
chr1 (90-143)||(14555316-14555369)
chr1 (254-307)||(48668852-48668905)
chr1 (91-131)||(51287396-51287437)
[»] chr8 (53 HSPs)
chr8 (62-324)||(7506958-7507217)
chr8 (64-324)||(23115228-23115484)
chr8 (67-324)||(26374489-26374741)
chr8 (64-324)||(42735336-42735593)
chr8 (62-324)||(42938176-42938435)
chr8 (64-307)||(32711358-32711598)
chr8 (64-324)||(2704878-2705135)
chr8 (66-316)||(41478989-41479236)
chr8 (64-324)||(5576679-5576937)
chr8 (66-320)||(43959549-43959800)
chr8 (60-324)||(42937246-42937498)
chr8 (164-324)||(24501872-24502028)
chr8 (58-324)||(14782194-14782457)
chr8 (58-324)||(44725869-44726132)
chr8 (64-154)||(24214817-24214907)
chr8 (69-324)||(39467527-39467778)
chr8 (169-324)||(10392296-10392447)
chr8 (67-324)||(18958786-18959040)
chr8 (64-147)||(26373694-26373778)
chr8 (58-147)||(24502004-24502093)
chr8 (67-318)||(7466228-7466476)
chr8 (254-324)||(43166749-43166819)
chr8 (67-324)||(19717940-19718194)
chr8 (254-324)||(4403184-4403254)
chr8 (67-324)||(9288516-9288763)
chr8 (67-318)||(16362089-16362337)
chr8 (254-324)||(26856144-26856214)
chr8 (67-143)||(32497376-32497452)
chr8 (67-307)||(4031334-4031571)
chr8 (254-324)||(10295439-10295510)
chr8 (64-154)||(8543409-8543503)
chr8 (254-318)||(37857196-37857260)
chr8 (67-318)||(42305850-42306098)
chr8 (255-324)||(8410457-8410526)
chr8 (67-151)||(10295610-10295694)
chr8 (67-154)||(39189997-39190084)
chr8 (170-307)||(31623692-31623825)
chr8 (67-139)||(4403000-4403072)
chr8 (254-318)||(18306026-18306090)
chr8 (254-318)||(32497602-32497666)
chr8 (257-324)||(13478309-13478376)
chr8 (67-154)||(43166874-43166961)
chr8 (67-143)||(26855961-26856035)
chr8 (256-320)||(4950079-4950143)
chr8 (67-143)||(31623588-31623664)
chr8 (257-317)||(39189881-39189940)
chr8 (67-139)||(43308520-43308592)
chr8 (64-107)||(4950246-4950289)
chr8 (64-143)||(17790436-17790515)
chr8 (63-120)||(2473149-2473206)
chr8 (52-141)||(29260283-29260371)
chr8 (91-151)||(18306190-18306250)
chr8 (79-107)||(32498875-32498903)
[»] chr6 (25 HSPs)
chr6 (57-324)||(6197537-6197801)
chr6 (58-324)||(1391507-1391770)
chr6 (64-324)||(2300797-2301054)
chr6 (64-316)||(29111459-29111711)
chr6 (64-316)||(29076486-29076737)
chr6 (91-319)||(28002581-28002806)
chr6 (80-324)||(7051750-7051991)
chr6 (58-324)||(31895579-31895842)
chr6 (67-324)||(34773301-34773555)
chr6 (67-324)||(14262492-14262746)
chr6 (254-324)||(34759109-34759179)
chr6 (90-237)||(656879-657028)
chr6 (254-320)||(7497152-7497218)
chr6 (254-318)||(30385122-30385186)
chr6 (254-318)||(31067569-31067633)
chr6 (90-139)||(708941-708990)
chr6 (269-318)||(4200492-4200541)
chr6 (90-143)||(31609697-31609750)
chr6 (64-147)||(34759242-34759327)
chr6 (90-143)||(5957152-5957205)
chr6 (90-143)||(7100190-7100243)
chr6 (90-143)||(8794387-8794440)
chr6 (254-298)||(3848286-3848330)
chr6 (67-143)||(7497010-7497086)
chr6 (19-61)||(21910797-21910839)
[»] chr3 (87 HSPs)
chr3 (64-324)||(996146-996402)
chr3 (57-324)||(20498092-20498355)
chr3 (64-324)||(19253716-19253973)
chr3 (57-324)||(37820537-37820801)
chr3 (64-324)||(10139206-10139463)
chr3 (75-324)||(35337635-35337881)
chr3 (64-324)||(51699540-51699796)
chr3 (64-324)||(3206265-3206513)
chr3 (58-324)||(40246727-40246990)
chr3 (67-324)||(1440012-1440265)
chr3 (64-324)||(29448918-29449177)
chr3 (84-324)||(44762097-44762334)
chr3 (60-320)||(29029891-29030147)
chr3 (64-324)||(33807858-33808119)
chr3 (64-324)||(25418255-25418512)
chr3 (63-324)||(54625480-54625738)
chr3 (67-324)||(6589455-6589710)
chr3 (164-324)||(3999705-3999861)
chr3 (55-324)||(36674190-36674456)
chr3 (64-320)||(52114419-52114671)
chr3 (55-151)||(12734070-12734166)
chr3 (170-324)||(33996601-33996751)
chr3 (69-324)||(44906573-44906825)
chr3 (64-324)||(22057652-22057908)
chr3 (104-324)||(53929188-53929395)
chr3 (57-318)||(10660417-10660675)
chr3 (67-324)||(11431418-11431672)
chr3 (58-307)||(23753463-23753709)
chr3 (67-324)||(26107153-26107407)
chr3 (67-324)||(40897035-40897290)
chr3 (170-324)||(52618025-52618175)
chr3 (254-324)||(18749688-18749758)
chr3 (254-324)||(34484090-34484160)
chr3 (67-324)||(51737786-51738039)
chr3 (255-324)||(5825139-5825208)
chr3 (251-316)||(52080000-52080065)
chr3 (67-154)||(15493958-15494045)
chr3 (170-324)||(17946284-17946434)
chr3 (254-324)||(32580252-32580322)
chr3 (254-324)||(48379233-48379303)
chr3 (254-324)||(50903300-50903370)
chr3 (254-324)||(52810454-52810524)
chr3 (254-324)||(54628920-54628990)
chr3 (90-324)||(6035113-6035343)
chr3 (57-117)||(16010745-16010805)
chr3 (67-143)||(27240481-27240557)
chr3 (64-119)||(33996753-33996808)
chr3 (254-324)||(20833068-20833138)
chr3 (254-316)||(27899420-27899482)
chr3 (254-324)||(31646344-31646414)
chr3 (170-318)||(10728707-10728851)
chr3 (62-147)||(38772264-38772349)
chr3 (64-154)||(52079882-52079965)
chr3 (90-143)||(10105019-10105072)
chr3 (170-318)||(39038036-39038180)
chr3 (67-147)||(539615-539695)
chr3 (91-147)||(10728833-10728889)
chr3 (67-143)||(31646522-31646598)
chr3 (258-318)||(39842550-39842610)
chr3 (67-143)||(39842667-39842743)
chr3 (67-147)||(52810312-52810392)
chr3 (273-324)||(1439954-1440005)
chr3 (65-143)||(18749460-18749538)
chr3 (80-143)||(54628748-54628811)
chr3 (254-312)||(539476-539534)
chr3 (85-143)||(2024117-2024175)
chr3 (67-141)||(20832887-20832961)
chr3 (58-139)||(45215410-45215491)
chr3 (54-151)||(50903473-50903570)
chr3 (254-318)||(50762116-50762180)
chr3 (67-143)||(50762288-50762364)
chr3 (58-141)||(52618205-52618288)
chr3 (64-147)||(55235076-55235159)
chr3 (258-324)||(55235264-55235331)
chr3 (93-147)||(17946248-17946302)
chr3 (90-143)||(10216166-10216219)
chr3 (90-143)||(10225795-10225848)
chr3 (90-143)||(28146264-28146317)
chr3 (66-134)||(27899277-27899345)
chr3 (254-298)||(37454937-37454981)
chr3 (67-139)||(48379050-48379122)
chr3 (254-305)||(23535890-23535941)
chr3 (90-141)||(38682452-38682503)
chr3 (107-153)||(6131440-6131486)
chr3 (89-147)||(12103544-12103602)
chr3 (296-324)||(6131293-6131321)
chr3 (91-143)||(10225674-10225726)
[»] chr4 (83 HSPs)
chr4 (56-324)||(1044691-1044953)
chr4 (64-324)||(25331020-25331277)
chr4 (57-320)||(28541580-28541840)
chr4 (73-324)||(32950896-32951144)
chr4 (57-324)||(55302725-55302989)
chr4 (64-324)||(41881142-41881401)
chr4 (60-324)||(7007258-7007520)
chr4 (55-324)||(22201896-22202161)
chr4 (64-324)||(39479415-39479674)
chr4 (65-324)||(1112784-1113039)
chr4 (53-324)||(24131042-24131300)
chr4 (83-324)||(34228643-34228880)
chr4 (65-304)||(46635722-46635959)
chr4 (58-324)||(7249825-7250096)
chr4 (75-324)||(19740968-19741213)
chr4 (55-324)||(30009737-30010002)
chr4 (64-320)||(37046515-37046769)
chr4 (55-324)||(25504699-25504964)
chr4 (54-324)||(23464832-23465101)
chr4 (66-316)||(31314800-31315043)
chr4 (64-320)||(40537214-40537462)
chr4 (56-324)||(5441285-5441550)
chr4 (164-324)||(25446041-25446196)
chr4 (57-324)||(27767938-27768202)
chr4 (164-320)||(12112935-12113087)
chr4 (67-324)||(54341036-54341290)
chr4 (251-323)||(41320883-41320955)
chr4 (58-319)||(51320804-51321062)
chr4 (64-146)||(42786656-42786739)
chr4 (66-324)||(53275727-53275985)
chr4 (88-324)||(37828462-37828695)
chr4 (207-320)||(42786717-42786826)
chr4 (113-324)||(3436531-3436739)
chr4 (254-324)||(48261203-48261273)
chr4 (254-324)||(37915903-37915973)
chr4 (64-195)||(41320639-41320769)
chr4 (255-324)||(44770913-44770982)
chr4 (254-318)||(23987290-23987354)
chr4 (252-320)||(27454142-27454210)
chr4 (67-320)||(29649731-29649981)
chr4 (64-143)||(37915674-37915753)
chr4 (254-324)||(32322167-32322237)
chr4 (60-141)||(25445979-25446059)
chr4 (67-154)||(20021236-20021323)
chr4 (58-318)||(30967365-30967622)
chr4 (64-143)||(44646721-44646800)
chr4 (258-320)||(9163156-9163218)
chr4 (64-154)||(49469210-49469300)
chr4 (68-307)||(49834890-49835126)
chr4 (254-324)||(54853528-54853598)
chr4 (255-316)||(12913301-12913362)
chr4 (255-324)||(28371001-28371070)
chr4 (83-147)||(12913131-12913195)
chr4 (67-147)||(23987148-23987228)
chr4 (67-143)||(28483875-28483951)
chr4 (254-318)||(50018327-50018391)
chr4 (269-324)||(20021424-20021479)
chr4 (63-134)||(27454337-27454408)
chr4 (254-316)||(36479299-36479361)
chr4 (254-307)||(32684065-32684118)
chr4 (254-318)||(28483975-28484039)
chr4 (258-324)||(41725205-41725268)
chr4 (68-147)||(28370859-28370938)
chr4 (70-141)||(36728052-36728123)
chr4 (67-141)||(32321983-32322057)
chr4 (254-307)||(5800054-5800107)
chr4 (90-143)||(38230798-38230851)
chr4 (58-151)||(54853698-54853791)
chr4 (255-316)||(56445413-56445474)
chr4 (67-147)||(36479423-36479501)
chr4 (67-154)||(24736336-24736422)
chr4 (68-107)||(44775947-44775986)
chr4 (67-154)||(50018143-50018230)
chr4 (90-139)||(28847111-28847160)
chr4 (98-147)||(44771046-44771095)
chr4 (254-307)||(49501588-49501641)
chr4 (67-132)||(49501762-49501827)
chr4 (254-307)||(49507653-49507706)
chr4 (67-132)||(49507827-49507892)
chr4 (90-143)||(53271935-53271988)
chr4 (92-143)||(28100587-28100639)
chr4 (91-147)||(32684179-32684235)
chr4 (67-119)||(34141628-34141680)
[»] scaffold0400 (1 HSPs)
scaffold0400 (64-324)||(15093-15347)
[»] scaffold0365 (1 HSPs)
scaffold0365 (64-324)||(15736-15990)
[»] scaffold0037 (1 HSPs)
scaffold0037 (53-321)||(100090-100355)
[»] scaffold0004 (2 HSPs)
scaffold0004 (164-324)||(102084-102242)
scaffold0004 (64-147)||(102026-102108)
[»] scaffold0113 (2 HSPs)
scaffold0113 (170-324)||(38955-39105)
scaffold0113 (64-147)||(39087-39170)
[»] scaffold0276 (2 HSPs)
scaffold0276 (114-320)||(603-806)
scaffold0276 (67-100)||(807-840)
[»] scaffold0651 (1 HSPs)
scaffold0651 (66-154)||(8654-8742)
[»] scaffold0151 (2 HSPs)
scaffold0151 (207-324)||(38665-38777)
scaffold0151 (63-146)||(38755-38838)
[»] scaffold1504 (1 HSPs)
scaffold1504 (67-324)||(756-1010)
[»] scaffold0922 (1 HSPs)
scaffold0922 (57-314)||(4083-4337)
[»] scaffold0543 (1 HSPs)
scaffold0543 (67-324)||(10453-10707)
[»] scaffold0306 (2 HSPs)
scaffold0306 (67-147)||(13817-13897)
scaffold0306 (254-318)||(13959-14023)
[»] scaffold0152 (2 HSPs)
scaffold0152 (67-147)||(21430-21510)
scaffold0152 (254-318)||(21304-21368)
[»] scaffold0042 (2 HSPs)
scaffold0042 (254-324)||(58136-58206)
scaffold0042 (67-143)||(58272-58348)
[»] scaffold0110 (2 HSPs)
scaffold0110 (254-324)||(39677-39747)
scaffold0110 (80-151)||(39847-39918)
[»] scaffold0347 (1 HSPs)
scaffold0347 (67-143)||(14788-14864)
[»] scaffold0054 (2 HSPs)
scaffold0054 (256-324)||(36967-37035)
scaffold0054 (90-147)||(37057-37114)
[»] scaffold0472 (1 HSPs)
scaffold0472 (64-134)||(1899-1969)
[»] scaffold0287 (1 HSPs)
scaffold0287 (90-143)||(11793-11846)
[»] scaffold0839 (1 HSPs)
scaffold0839 (284-324)||(3752-3792)
[»] scaffold0007 (1 HSPs)
scaffold0007 (257-324)||(199905-199972)
[»] scaffold0492 (1 HSPs)
scaffold0492 (67-124)||(12030-12087)


Alignment Details
Target: chr2 (Bit Score: 140; Significance: 3e-73; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 64 - 324
Target Start/End: Original strand, 12407271 - 12407528
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnnnnnn 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| |||            
T  12407271 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattcttttcaattttaaaaaagt 12407370  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||| ||||||||||||||||       ||    ||||||||||||    
T  12407371 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagt----ctagtggtattc 12407466  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12407467 aaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 12407528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 64 - 324
Target Start/End: Original strand, 16269582 - 16269839
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| ||||||             
T  16269582 gggtgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 16269681  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    ||||||||||||    
T  16269682 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattc 16269777  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16269778 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 16269839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 64 - 324
Target Start/End: Original strand, 24776246 - 24776503
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||  |||||             
T  24776246 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaagt 24776345  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    ||||||||||||    
T  24776346 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattc 24776441  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24776442 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 24776503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 65 - 324
Target Start/End: Complemental strand, 14198894 - 14198639
Alignment:
Q  65 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnnt 164  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||  |||||         |    
T  14198894 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaagtct 14198795  T
Q  165 tgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaa 264  Q
    ||| |||||||||||| ||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    | ||||||||||||    
T  14198794 tgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ccagtggtattcaa 14198699  T
Q  265 aagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14198698 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 14198639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 31170943 - 31170686
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||             
T  31170943 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaagt 31170844  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    ||||||||||||    
T  31170843 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattc 31170748  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  31170747 aaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggatt 31170686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 56 - 324
Target Start/End: Original strand, 1789325 - 1789590
Alignment:
Q  56 atttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt- 154  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||| ||||||| ||||||     
T  1789325 atttaggggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgtggtattcaatcaaaactctttccaattta 1789424  T
Q  155 nnnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctag 254  Q
             |||| |||||||||||||||||||||||||||       ||| | || ||||||||||| ||||||||||||||       ||    ||||    
T  1789425 aaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagt----ctag 1789520  T
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1789521 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 1789590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 65 - 324
Target Start/End: Original strand, 44765667 - 44765923
Alignment:
Q  65 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnn 163  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||              
T  44765667 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaaagtc 44765766  T
Q  164 ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattca 263  Q
    |||| |||||||||||||||||||||||||||       ||| |||||||||||||| ||||||||||||||||       ||    |||||||||||||    
T  44765767 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagt----ctagtggtattca 44765862  T
Q  264 aaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||| ||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  44765863 aaatcattcaaatttcgaaagattgtttaataaataagattttgatggattttgtgggatt 44765923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 64 - 320
Target Start/End: Original strand, 35316953 - 35317206
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||             
T  35316953 gggtgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 35317052  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||  ||||||||||||||||||||||||||       ||    ||||||||||||    
T  35317053 tttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattc 35317148  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35317149 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 35317206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 305786 - 305527
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagactt-ttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt--nnnnnn 160  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| ||||||            
T  305786 gggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaa 305687  T
Q  161 nnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtat 260  Q
       |||| |||||||||||||||| ||||||||||       ||| |||||||||||||||||||||||||||||||       ||    ||||||||||    
T  305686 gtcttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtat 305591  T
Q  261 tcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||    
T  305590 tcaaaatcattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagatt 305527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 22552082 - 22551825
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||| | ||| ||||||             
T  22552082 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattttttccaatttaaaaaaagt 22551983  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||| ||||||||||       ||    ||||||||||||    
T  22551982 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagt----ctagtggtattc 22551887  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||  |||||||||| ||| ||||||||| ||||| | |||||||||||||||||||||||    
T  22551886 aaaattattcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggatt 22551825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 75 - 324
Target Start/End: Original strand, 32125152 - 32125401
Alignment:
Q  75 atcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgtattatt 173  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||          |||| |||||    
T  32125152 atcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttatt 32125251  T
Q  174 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaat---cacttnnnnnnngtctagctagtggtattcaaaagcat 270  Q
    ||||||| ||||||||||||||       ||||||||||||||||||||||||||||||   || ||       ||| ||    |||||||||||| |||    
T  32125252 caatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaag----tggtattcaaaatcat 32125347  T
Q  271 tcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32125348 tcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 32125401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 68 - 324
Target Start/End: Complemental strand, 5093352 - 5093109
Alignment:
Q  68 gtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttg 166  Q
    ||||||||||||||||||||| ||||||||||||||          ||||| ||||||||||||||| |||||||||||| ||||||          |||    
T  5093352 gtattggatcatgattctaagggattttaaaagact----------gaaaatatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttg 5093263  T
Q  167 tattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaa 266  Q
    | |||||||||||||||||||||||||||       ||| ||||||||||||||||||| |||||||||||       ||||||    | ||||||||||    
T  5093262 tgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctag----tagtattcaaaa 5093167  T
Q  267 gcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5093166 tcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 5093109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 64 - 320
Target Start/End: Original strand, 43847537 - 43847790
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn 163  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||||| ||||||| |||| | |||||||  ||| ||||||| ||||||             
T  43847537 gggtgtattagatcatgtatctaagggattttaaaagacttttttatcgtgaaaaagtcttctagtattcaagcaaaactctttccaatttaaaaaaagt 43847636  T
Q  164 -ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       |||||| |    ||||||    
T  43847637 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtt----gtattc 43847732  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    |||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  43847733 aaaatcattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtgg 43847790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 115 - 324
Target Start/End: Original strand, 20605178 - 20605384
Alignment:
Q  115 aaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggta 213  Q
    ||||| |||||||||||||| |||||||||||| ||||||          |||| |||||||||||||||||||||||||||       ||| |||||||    
T  20605178 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggta 20605277  T
Q  214 ttcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggat 313  Q
    ||||||||||||||||||||||||       ||||||    |||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||    
T  20605278 ttcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggat 20605373  T
Q  314 tttgtgggatt 324  Q
    |||||||||||    
T  20605374 tttgtgggatt 20605384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 64 - 229
Target Start/End: Original strand, 20605043 - 20605209
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||||             
T  20605043 gggtgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 20605142  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactctt 229  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||    
T  20605143 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctt 20605209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 64 - 154
Target Start/End: Original strand, 9120059 - 9120149
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  9120059 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcatgtggtattcaatcaagactctttccaattt 9120149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 50 - 320
Target Start/End: Original strand, 28844433 - 28844699
Alignment:
Q  50 ttcaaaatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttc 149  Q
    ||||| ||||||| || |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| |    
T  28844433 ttcaatatttagg-ggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgc 28844531  T
Q  150 aatttnnnnnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtct 248  Q
    || ||          ||||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       ||||    
T  28844532 aacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtct 28844631  T
Q  249 agctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
     |    |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  28844632 tg----tggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgg 28844699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 57 - 318
Target Start/End: Original strand, 7026487 - 7026746
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaa-tcttgtggtattcattcaagactcttttcaattt- 154  Q
    |||||| || |||||||||| | ||||||| |||||||||||||||||||| || ||||||||| |||||||||||||| |||||||| ||| ||||||     
T  7026487 tttagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaagactttttgcaattta 7026586  T
Q  155 nnnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctag 254  Q
             ||||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       ||    || |    
T  7026587 aaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagt----cttg 7026682  T
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    |||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  7026683 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 33135517 - 33135771
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | |||||||   |||||||||||||||||| || |||||||| |||| ||||||||| |||||||| ||| ||||||          ||    
T  33135517 tgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaagtatt 33135616  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    |||||||||||    
T  33135617 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcg----tggtattcaaa 33135712  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  33135713 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 33135771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 26788678 - 26788934
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||          ||    
T  26788678 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 26788777  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| |           |  || ||||||||||||    
T  26788778 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagt--cttgtggtattcaaa 26788875  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  26788876 atcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggatt 26788934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 64 - 316
Target Start/End: Complemental strand, 26601519 - 26601270
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||| || ||||| |||||||||||||| |||| |||||||  |||||             
T  26601519 gggtgtattggatcatgtttctaaaggattttaaaagacttttttattattaaaaagtcttgtggtattcaatcaaaactctttctaatttaaaaaaagt 26601420  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| ||||| |||||||| |||||||||||        ||| ||| |||||||||||||||||||||||||||       ||    |  |||||||||    
T  26601419 tttgtgttatttaatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagt----cacgtggtattc 26601324  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    |||| ||||||||||| ||| | ||||||||||||||||||||||  |||||||    
T  26601323 aaaatcattcaaatttcgaatgtttgtttaataaatcagattttgtgggatttt 26601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 320
Target Start/End: Complemental strand, 28740598 - 28740349
Alignment:
Q  68 gtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttg 166  Q
    ||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||| ||| ||| ||| ||          |||    
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 28740499  T
Q  167 tattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaa 266  Q
    |  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    ||||||||||||    
T  28740498 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttg----tggtattcaaaa 28740403  T
Q  267 gcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
     ||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  28740402 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgg 28740349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 3463565 - 3463652
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||||| ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||| ||||||    
T  3463565 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaattt 3463652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 378860 - 378949
Alignment:
Q  54 aaatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||| ||| || ||||||||||||||||| |||| |||||||||||||||||| || |||||||| |||||||||||||| ||||||||    
T  378860 aaattaagggggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 378949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 9120201 - 9120274
Alignment:
Q  251 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||| ||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  9120201 ctagtgatattcaaaatcattcagattttaaaggattgtttaataaattagattttgatggattttgtgggatt 9120274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 215551 - 215465
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||| || |||||||||| | ||||||| |||||||||||||||||||| || |||||||| |||||||||||||| ||||||||    
T  215551 tttagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 215465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 10657484 - 10657554
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  ||||||||||||||||||||||||    
T  10657484 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggatt 10657554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 18177345 - 18177415
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||  ||||||||||||||||||||||||    
T  18177345 gtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggatt 18177415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 25288237 - 25288307
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||| |||||||||||||    
T  25288237 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggatt 25288307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 19144915 - 19145004
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatt 153  Q
    ||||||||||||  ||||||||||| |||||||||| | ||||||||||| ||||| |||||||||||||| |||| |||| ||||||||    
T  19144915 gggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgtggtattcaatcaaaactcatttcaatt 19145004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 43078559 - 43078643
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaaga 141  Q
    ||||||||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| ||||||    
T  43078559 tttaggaggatgtattggattaggattctatgggattttaaaagactttttgattatgaaaaagtcttgtggtattcaatcaaga 43078643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 318
Target Start/End: Original strand, 379016 - 379079
Alignment:
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  379016 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 318
Target Start/End: Complemental strand, 13833553 - 13833490
Alignment:
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||  |||||||||    
T  13833553 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgtgggattttgt 13833490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 18176559 - 18176474
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||||||||| || | ||||  ||| |||||||||||| ||||| || || |||||||||||||||||||| ||||||||    
T  18176559 ttaggagggtgtattgaattaagatttgaagggattttaaaagattttttaataataaaaaaatcttgtggtattcaatcaagact 18176474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 43825085 - 43825147
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggt 129  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || |||||||| |||||||||    
T  43825085 tgtattggattatgattctatgagattttaaaagattttttaattatgaaaaagtcttgtggt 43825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 10125594 - 10125521
Alignment:
Q  81 attctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    ||||||||||||||||||||| ||||| || |||||||| ||| |||  ||||| |||||||||||| ||||||    
T  10125594 attctaagagattttaaaagattttttaattatgaaaaagtctcgtgacattcaatcaagactctttgcaattt 10125521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 3463750 - 3463814
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    |||||||| |||| ||||||| |||  ||||||||||||||||||  ||||||||||||||||||    
T  3463750 gtggtatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatggattttgt 3463814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 13833738 - 13833662
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | ||||||| ||||||||||||||  |||| || |||||||| | |||||||||||| ||||||||    
T  13833738 tgtattggattaggattctatgagattttaaaagatattttaattatgaaaaagtattgtggtattcaatcaagact 13833662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 268 - 324
Target Start/End: Original strand, 43078655 - 43078711
Alignment:
Q  268 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||| ||| |||||||||||||||  |||||| |||||||||||||||||    
T  43078655 cattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggatt 43078711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 3574929 - 3574978
Alignment:
Q  258 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    ||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  3574929 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 3574765 - 3574817
Alignment:
Q  91 attttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||| || |||||||| | |||||||||||| ||||||||    
T  3574765 attttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagact 3574817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 21370682 - 21370638
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaat 298  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||    
T  21370682 gtggtattcaaaatcattcaaattttgaagtattgtttgataaat 21370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 3858269 - 3858191
Alignment:
Q  65 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||| || | |||| |||| |||||||||||||||||| || || ||||| | || ||||||||| ||||||||    
T  3858269 ggtgtattgaattaagattttaagggattttaaaagactttttaatgataaaaaacttttttggtattcaatcaagact 3858191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 39698681 - 39698603
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagac 142  Q
    ||||||||| ||| | ||||  |||||||||||||| ||||||| |  || ||| |||||||||||||||| |||||||    
T  39698681 gggtgtattcgattaggatttcaagagattttaaaaaactttttaactataaaacaatcttgtggtattcaatcaagac 39698603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 6224679 - 6224626
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    |||||||||||||  |||||||||| |||||||| ||||||||||  |||||||    
T  6224679 gtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 8172054 - 8172111
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    |||||||||||| |||||||| |||||||||| ||||||  |||| |||||| |||||    
T  8172054 gattttaaaagatttttttattatgaaaaaattttgtggctttcaatcaagattcttt 8172111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 10125418 - 10125378
Alignment:
Q  258 tattcaaaagcattcaaattttgaaggattgtttaataaat 298  Q
    ||||||||| |||||||||||  ||||||||||||||||||    
T  10125418 tattcaaaatcattcaaatttcaaaggattgtttaataaat 10125378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 4e-72; HSPs: 84)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 58 - 324
Target Start/End: Original strand, 30440681 - 30440944
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nn 156  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||       
T  30440681 ttaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaa 30440780  T
Q  157 nnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtg 256  Q
           |||| |||||||||||||||||||||||||||        || |||||||||||||||||||||||||||||||       ||    ||||||    
T  30440781 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtg 30440876  T
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30440877 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 30440944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 62 - 324
Target Start/End: Complemental strand, 43581408 - 43581149
Alignment:
Q  62 gagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnn 160  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||           
T  43581408 gagggtgtattggatcatgattctaaagaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 43581309  T
Q  161 nnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtat 260  Q
       |||| |||||||||||||||||||||||||||       ||| ||| |||||||||||||||||||||||||||       ||    ||||||||||    
T  43581308 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtat 43581213  T
Q  261 tcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43581212 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 43581149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 57 - 324
Target Start/End: Original strand, 973067 - 973332
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaaga-cttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt- 154  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| |||||||||||||| |||||||||||| ||||||     
T  973067 tttaggagggtgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattta 973166  T
Q  155 nnnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctag 254  Q
             |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||           |  |||    
T  973167 aaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaa----atttag 973262  T
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  973263 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 973332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 44343712 - 44343455
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||             
T  44343712 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 44343613  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||| ||||||||||||||||||||||||||       ||     ||||||||||     
T  44343612 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagt----ttagtggtattt 44343517  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44343516 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 44343455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 60 - 324
Target Start/End: Original strand, 47914153 - 47914414
Alignment:
Q  60 aggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnn 158  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||| |||| ||||||||||| |||        
T  47914153 aggagggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaa 47914252  T
Q  159 nnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggt 258  Q
         |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       ||    |||||| |    
T  47914253 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtgat 47914348  T
Q  259 attcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  47914349 attcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggatt 47914414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 57 - 316
Target Start/End: Original strand, 31638759 - 31639015
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-n 155  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||      
T  31638759 tttaggagggtgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtggtattcaatcaagactcttttcaatttaa 31638858  T
Q  156 nnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagt 255  Q
            |||| |||||||||||| ||||||||||||||        |  |||||||||| ||||||||||||||||||||       ||    |||||    
T  31638859 aaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagt----ctagt 31638954  T
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31638955 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 62 - 320
Target Start/End: Original strand, 47879057 - 47879312
Alignment:
Q  62 gagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnnnn 160  Q
    |||||||||||| |||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||| |||| ||||||||||| |||          
T  47879057 gagggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaa 47879156  T
Q  161 nnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtat 260  Q
       |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       ||    |||||| |||    
T  47879157 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtgatat 47879252  T
Q  261 tcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  47879253 tcaaaatcattcaaatttaaaaggattgtttaataaatcagattttgatggattttgtgg 47879312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 64 - 320
Target Start/End: Original strand, 34008906 - 34009157
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn 163  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||   |||||||| |||||||||||||||||||             
T  34008906 gggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtct---ggtattcaatcaagactcttttcaatttaaaaaaagt 34009002  T
Q  164 -ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||| ||||||||||       ||| |||||||||||||||| ||||||||||||||       |||   ||||||||||||    
T  34009003 cttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtc---ctagtggtattc 34009099  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34009100 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 34009157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 18915051 - 18914794
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnnnnnn 162  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| |||            
T  18915051 gggtgtattggatcatgtatctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaagt 18914952  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||| |||||||||| |||       ||| |||||||||||||||||||||||||||||||       ||    ||||||||||||    
T  18914951 cttgtgttattcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattc 18914856  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| |||||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  18914855 aaaatcattcaaatttcaaaggtttgtttaataaatcagattttgatggattttgtgggatt 18914794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 57 - 324
Target Start/End: Original strand, 12893292 - 12893556
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-n 155  Q
    |||||| |||||||||||||||||||||||||  ||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||| ||||||      
T  12893292 tttaggggggtgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaa 12893391  T
Q  156 nnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagt 255  Q
            |||| |||||||||||||||||||||||||||       ||| ||||||||| |||||||||||||||||||||       ||    ||| |    
T  12893392 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagt----ctaat 12893487  T
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  12893488 ggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagatt 12893556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 66 - 324
Target Start/End: Complemental strand, 20275577 - 20275322
Alignment:
Q  66 gtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnnt 164  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||| |||||| ||||| ||||||          |    
T  20275577 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaataagtcttgtggtattcaatcaagattctttccaatttaaaaaaagtct 20275478  T
Q  165 tgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaa 264  Q
    ||  ||||||||||||||||| |||||||||       ||| | |||||||||||||||||||||||||||||       ||||   || ||||||||||    
T  20275477 tgggttattcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtct---ta-tggtattcaa 20275382  T
Q  265 aagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20275381 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 20275322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 67 - 324
Target Start/End: Complemental strand, 7719574 - 7719319
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaa-gactcttttcaatttnnnnnnnnn-t 164  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| ||||||          |    
T  7719574 tgtattggatcatgattgtaaaagattttaaaagacttttttatcatgaaaaattcttgtggtattcaatcaaagactctttccaatttaaaaaaagtct 7719475  T
Q  165 tgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaa 264  Q
    ||| |||||||||||| ||| ||||||||||       ||| |||||||||||||||||||||||||||||||        |||||    ||||||||||    
T  7719474 tgtgttattcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctag----tggtattcaa 7719379  T
Q  265 aagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    || ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  7719378 aatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggatt 7719319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 40996966 - 40996708
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagactttttt-atcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||| | |||||| ||||||||| | |||||||||||||| |||||||||||| ||||||            
T  40996966 gggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaagagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 40996867  T
Q  163 ntt-gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtatt 261  Q
      | || |||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||| |||       ||||||    |||||||    
T  40996866 tctcgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctag----tggtatt 40996771  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  40996770 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggatt 40996708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 65 - 324
Target Start/End: Complemental strand, 32143235 - 32142976
Alignment:
Q  65 ggtgtattggatcatgattctaagagattttaaaagactttttt-atcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn 163  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||  |||||             
T  32143235 ggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttctaatttaaaaaaagt 32143136  T
Q  164 -ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| ||||||||| ||  || ||||||||||       ||| | ||||||| |||||||||||||||||||||          |  |  |||||||||    
T  32143135 cttgtgttattcaataaattttttttgtcatttaaaaaaagtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcac--gtggtattc 32143038  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32143037 aaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 32142976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 66 - 316
Target Start/End: Original strand, 727405 - 727653
Alignment:
Q  66 gtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnnt 164  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||          |    
T  727405 gtgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaagtcttgcggtattcaatcaagactcttttcaatttaaaaaaagtct 727504  T
Q  165 tgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaa 264  Q
    ||| |||||||||||| ||||||||||||||       ||| |||| ||||||||||| |||||| |||||||           | ||||| ||||||||    
T  727505 tgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaa---aatctagtagtattcaa 727601  T
Q  265 aagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    || |||||||||||  |||||||||||||||||||||||||||  |||||||    
T  727602 aatcattcaaatttcaaaggattgtttaataaatcagattttgtgggatttt 727653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 67 - 324
Target Start/End: Complemental strand, 29615077 - 29614823
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnntt 165  Q
    |||||||||| ||||||||| |||||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||          ||    
T  29615077 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 29614978  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       ||    || ||| ||||||||    
T  29614977 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagt----cttgtgatattcaaa 29614882  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  29614881 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 29614823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 115 - 324
Target Start/End: Original strand, 34695215 - 34695421
Alignment:
Q  115 aaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggta 213  Q
    ||||| |||||||||||||| |||||||||||| ||||||          |||| ||||||||||||||||| |||||||||       ||  |||||||    
T  34695215 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggta 34695314  T
Q  214 ttcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggat 313  Q
    ||||||||||||||||||||||||       ||| ||    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  34695315 ttcaatcaagactcttaatcacttaaaaaaagtccag----tggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatggat 34695410  T
Q  314 tttgtgggatt 324  Q
    |||||||||||    
T  34695411 tttgtgggatt 34695421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 64 - 233
Target Start/End: Original strand, 8078286 - 8078457
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| ||| |||            
T  8078286 gggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaaaa 8078385  T
Q  163 nttgtattattcaatcaagattctttgtcattt-nnnnnnngtcatgtggtattcaatcaagactcttaatc 233  Q
     |||| |||||||||||||||||||||||||||         || |||||||||||||||||||||||||||    
T  8078386 tttgtgttattcaatcaagattctttgtcatttaaaaaagaatcttgtggtattcaatcaagactcttaatc 8078457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 7718534 - 7718421
Alignment:
Q  207 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 306  Q
    |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  7718534 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 7718439  T
Q  307 gatggattttgtgggatt 324  Q
    ||||||||||||||||||    
T  7718438 gatggattttgtgggatt 7718421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 39219654 - 39219561
Alignment:
Q  61 ggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  39219654 ggagggtgtattggatcataattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 39219561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 64 - 154
Target Start/End: Original strand, 34695122 - 34695212
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| ||||||    
T  34695122 gggtgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaattt 34695212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 324
Target Start/End: Complemental strand, 9882549 - 9882295
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnntt- 165  Q
    |||||||||| | |||||||   |||||||||||||||||| || |||||||| |||| ||||||||| |||||||| ||| ||||||         ||     
T  9882549 tgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaagtttt 9882450  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    |||||||||||    
T  9882449 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttg----tggtattcaaa 9882354  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| ||| |||||||||||||||  ||||||||||||||||||||||||    
T  9882353 atcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggatt 9882295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 23101185 - 23101439
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    ||||| |||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||| | ||| ||||||          ||    
T  23101185 tgtatcggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaatttaaaaaaagtctt 23101284  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |    |||||||||||    
T  23101285 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg----tggtattcaaa 23101380  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  23101381 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 23101439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 28342234 - 28342488
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||| | ||| ||||||          ||    
T  28342234 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaaaagtctt 28342333  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||| ||||| || |||| ||       |||| |    |||||||||||    
T  28342334 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttg----tggtattcaaa 28342429  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  28342430 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 28342488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 43679491 - 43679562
Alignment:
Q  253 agtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43679491 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 43679562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 33382524 - 33382778
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||| ||| | ||||||| |||||||||||||||||||| || |||||||| |||| ||||||||| |||||||| ||| ||| ||          ||    
T  33382524 tgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaacttaaaaaaagcctt 33382623  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       ||||      |||||||||||    
T  33382624 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctca----tggtattcaaa 33382719  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | |||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  33382720 atcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 33382778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 39783986 - 39784240
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    ||||||||||   ||||||| | |||||||||||||||||| || |||||||| || ||||||||||| |||||||| ||| ||||||          ||    
T  39783986 tgtattggattgagattctatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 39784085  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |    |||||||||||    
T  39784086 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg----tggtattcaaa 39784181  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | |||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  39784182 atcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 39784240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 43679363 - 43679451
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagactttt-ttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||||||||||||||||| |||||||||||| |||| ||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  43679363 tgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 43679451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 10068538 - 10068608
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  10068538 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggatt 10068608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 12963589 - 12963842
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | ||||||| |||||||||||||||||||| || | |||||| |||||||||| ||| |||||||||||| ||| ||          ||    
T  12963589 tgtattggattaggattcta-gagattttaaaagactttttaattacgaaaaagtcttgtggtactcaatcaagactctttgcaacttaaaaaaagtctt 12963687  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || | ||||||||||||| | || || ||||       |||| |    |||||| ||||    
T  12963688 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcg----tggtatccaaa 12963783  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  12963784 atcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggatt 12963842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 316
Target Start/End: Original strand, 19251439 - 19251672
Alignment:
Q  80 gattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgtattattcaatc 178  Q
    |||||||||||||||||||||||||||| || | |||||| |||||| ||||||| |||||||||||| ||| ||          ||||  |||||||||    
T  19251439 gattctaagagattttaaaagactttttaattacgaaaaagtcttgtagtattcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatc 19251538  T
Q  179 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattt 278  Q
    |||| ||||||||||||       ||| || ||||||||||||| | | || |||||||       |||| |    |||||||||||| |||||||||||    
T  19251539 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcg----tggtattcaaaatcattcaaattt 19251634  T
Q  279 tgaaggattgtttaataaatcagattttgatggatttt 316  Q
     |||||||||||||||||||  ||||||||||||||||    
T  19251635 cgaaggattgtttaataaattggattttgatggatttt 19251672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 39219548 - 39219436
Alignment:
Q  207 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 306  Q
    |||| ||||||||||||||||||||||||||       |||||     |||||||||||| |||||||||||||| | ||||||||||||||||||||||    
T  39219548 tgtgttattcaatcaagactcttaatcacttaaaaaaagtctat----tggtattcaaaatcattcaaattttgatg-attgtttaataaatcagatttt 39219454  T
Q  307 gatggattttgtgggatt 324  Q
    ||||||||||||||||||    
T  39219453 gatggattttgtgggatt 39219436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 3022997 - 3023067
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  3022997 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 3023067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 18838276 - 18838530
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | ||||||| | |||| ||||||||||||| || |||||||  |||||||||||||| |||||||| ||| ||| ||          ||    
T  18838276 tgtattggattaggattctatgggattataaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatatt 18838375  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||| ||||       ||| || ||||||||||||||||| || ||| |||       |||| |    |||||||||||    
T  18838376 gtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttg----tggtattcaaa 18838471  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| ||| |||||||||||||||  ||||||||||||||||||||||||    
T  18838472 atcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggatt 18838530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 7113529 - 7113600
Alignment:
Q  253 agtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||||  |||||||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  7113529 agtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggatt 7113600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 10676676 - 10676604
Alignment:
Q  82 ttctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    ||||||| |||||||||||||||||| || ||||||||||||||||||||| | |||||||||||| ||||||    
T  10676676 ttctaagggattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagactctttgcaattt 10676604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 29893010 - 29893090
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    |||||| ||| | ||||||| |||||||||||||||||||| || |||||||| |||||||||||||| ||||||||||||    
T  29893010 tgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactcttt 29893090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 43187656 - 43187576
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    |||||||||||   ||||||||||||||||||||||||||| || |||||| | |||||||||||||| ||||||||||||    
T  43187656 tgtattggatcgaaattctaagagattttaaaagactttttaattatgaaagagtcttgtggtattcaatcaagactcttt 43187576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 44122029 - 44121965
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  44122029 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 44121965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 7993029 - 7993283
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnntt- 165  Q
    |||||||||| | |||||||   |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||| ||          |     
T  7993029 tgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctc 7993128  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| |||||| |||||       ||| || ||||||||||||| ||| || |||||||       ||||   || |||||||||||    
T  7993129 gtggtattcaatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtct---ta-tggtattcaaa 7993224  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| |||||||||||||||||||   ||||||||||||| |||||||||    
T  7993225 atcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggatt 7993283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 318
Target Start/End: Original strand, 29585586 - 29585649
Alignment:
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    |||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||    
T  29585586 tggtattcaaaatcattcaaattttgaaggattgtttaataatttggattttgatggattttgt 29585649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 318
Target Start/End: Original strand, 37327837 - 37328062
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgtattattcaatcaagattcttt 188  Q
    |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||| ||          ||||  ||||||||||||| |||||    
T  37327837 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactcttt 37327936  T
Q  189 gtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattg 288  Q
    |||||||       ||| || ||||||||||||||||| || || ||||       |||| |    |||||||||||| |||||||||||  ||||||||    
T  37327937 gtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttg----tggtattcaaaatcattcaaatttcaaaggattg 37328032  T
Q  289 tttaataaatcagattttgatggattttgt 318  Q
    ||||||||||   |||||||||||||||||    
T  37328033 tttaataaattgaattttgatggattttgt 37328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 8675404 - 8675474
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| |||| ||| || |||||||||||||||||||  ||||||||||||||||||||||||    
T  8675404 gtggtattcaaaatcatttaaacttcgaaggattgtttaataaattggattttgatggattttgtgggatt 8675474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 28034934 - 28034864
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||||  ||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||    
T  28034934 gtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggatt 28034864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 9179767 - 9179836
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattc 133  Q
    ||||||||||||| |  ||||||| ||||||||||||||||||||||||||||||| ||||||| |||||    
T  9179767 gggtgtattggattagcattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtgatattc 9179836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 17001349 - 17001260
Alignment:
Q  54 aaatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||| ||| || |||||||||| | ||||||| |||||||||||| ||||||| || |||||||| |||||||||||||| ||||||||    
T  17001349 aaattaagggggatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcttgtggtattcaatcaagact 17001260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 318
Target Start/End: Complemental strand, 40460999 - 40460772
Alignment:
Q  88 gagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgtattattcaatcaagattct 186  Q
    |||||||||||||||||||| || |||||||| | |||||||||| | |||||||| ||| ||||||          ||||  |||||||| |||| |||    
T  40460999 gagattttaaaagactttttaattatgaaaaagttttgtggtatttaatcaagactttttgcaatttaaaaaatgtcttgtgatattcaattaagactct 40460900  T
Q  187 ttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggat 286  Q
    |||||||||       ||| || | ||||||||||||||| || |||||||       |||| |    |||||||||||| ||||||||||| ||| |||    
T  40460899 ttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttg----tggtattcaaaatcattcaaatttcgaatgat 40460804  T
Q  287 tgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||  ||||||||||||||||||    
T  40460803 tgtttaataaattggattttgatggattttgt 40460772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 43187485 - 43187416
Alignment:
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||| |||||||||||||||| ||||||||||||||  |||||||||| ||||||| |||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggatt 43187416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 509727 - 509791
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  ||||||||||||||||||    
T  509727 gtggtattcaaaatcattcaaatttcgaacgattgtttaataaattggattttgatggattttgt 509791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 21067769 - 21067845
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | ||||||| |||||||||||||| ||||| || |||||||| |||||||||||||| ||||||||    
T  21067769 tgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagact 21067845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 311
Target Start/End: Complemental strand, 3797370 - 3797129
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnnt-t 165  Q
    |||||| ||| ||||||||||   ||||||||||||||||| || |||||| | | ||| |||||||| |||||||||||| ||||||           |    
T  3797370 tgtattagattatgattctaatgaattttaaaagactttttaattatgaaatagttttgaggtattcaatcaagactctttgcaatttaaaaaaagtcat 3797271  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
     |  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    ||||||||||     
T  3797270 ctgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttg----tggtattcaag 3797175  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatgg 311  Q
    | |||| |||||||||||||||||||||||||| ||||||||||||    
T  3797174 atcattaaaattttgaaggattgtttaataaattagattttgatgg 3797129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 41827390 - 41827445
Alignment:
Q  269 attcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  41827390 attcaaaatttgaaggattgtttaataaattggattttgatggattttgtgggatt 41827445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 12740444 - 12740513
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||  ||||||||| ||||||||||||||    
T  12740444 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaat-ggattttgatagattttgtgggatt 12740513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 25805763 - 25805833
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||   ||| |||||||||||||||||||    
T  25805763 gtggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggatt 25805833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 32883853 - 32883923
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| ||| ||||||||| |||||  ||||||||||||||| ||||||||    
T  32883853 gtggtattcaaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggatt 32883923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 320
Target Start/End: Complemental strand, 46405742 - 46405494
Alignment:
Q  69 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnnnnnnnttgt 167  Q
    |||||||| | ||||||| |  ||||||||||||||||| || |||||||| || ||||||||||| |||||||| ||| ||| ||          |||     
T  46405742 tattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgc 46405643  T
Q  168 attattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaag 267  Q
      ||||||||||||| |||||||| |||       ||| || ||||||||||||||||| || |||||||       ||    || |||||||||||||     
T  46405642 ggtattcaatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagt----cttgtggtattcaaaat 46405547  T
Q  268 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    |||||||||||  || |||||||||||||||  ||||||||||||||||||||    
T  46405546 cattcaaatttcaaatgattgtttaataaattggattttgatggattttgtgg 46405494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 48117915 - 48117830
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||| || |||||||||| |  |||||| | |||||||||||||||||| || |||||||| |||||||||||||| ||||||||    
T  48117915 ttagggggatgtattggattagtattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 48117830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 509585 - 509661
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | |||| || | |||||||||||||||||| || |||||||| |||||||||||||| ||||||||    
T  509585 tgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 509661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 154
Target Start/End: Original strand, 7113358 - 7113437
Alignment:
Q  75 atcatgattctaagagattttaaaagac-ttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||||||||| ||||||||||||| ||||||||||||| ||| | || ||||||||| |||||||||||| ||||||    
T  7113358 atcatgattctaagggattttaaaagactttttttatcatgacaaagtatt-tggtattcaatcaagactctttccaattt 7113437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 31401579 - 31401642
Alignment:
Q  55 aatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaa 119  Q
    |||||||| ||||||||||||||||||||||||   | |||||||||||||||||||||||||||    
T  31401579 aatttagg-gggtgtattggatcatgattctaaagaactttaaaagacttttttatcatgaaaaa 31401642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 33892564 - 33892492
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaa 139  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||||||| | |||||||||||| ||||    
T  33892564 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaa 33892492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 37973087 - 37973011
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | ||||||| |||||||||||| ||||||| || |||||| | |||||||||||||| ||||||||    
T  37973087 tgtattggattaggattctatgagattttaaaatactttttaattatgaaagagtcttgtggtattcaatcaagact 37973011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 10068353 - 10068440
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||||  |||||||| |  |||||||||||||||||| || |||||||| ||||||| |||||| |||| ||||||| ||||||    
T  10068353 tgtattggaatatgattctgatggattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaaaactctttgcaattt 10068440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 10676546 - 10676487
Alignment:
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    |||||||||| ||||||||||| |||||||||||||||||||  ||||| ||||||||||    
T  10676546 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttggatggatttt 10676487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 29585446 - 29585524
Alignment:
Q  69 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||| || ||||||||| |||||||||||||| ||||| || |||||||| | |||||||||||| |||||| |||||    
T  29585446 tattgaattatgattctacgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaagattcttt 29585524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 318
Target Start/End: Original strand, 39028008 - 39028232
Alignment:
Q  91 attttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnnnnnnnttgtattattcaatcaagattctttg 189  Q
    ||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||| ||          ||||  ||||||||||||| ||||||    
T  39028008 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaagactctttg 39028107  T
Q  190 tcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgt 289  Q
    ||||||       ||| || | ||||||||||||||| || |||||||       ||    || ||| ||||||||| | ||||||||  ||| ||||||    
T  39028108 tcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagt----cttgtgttattcaaaatcgttcaaattacgaaagattgt 39028203  T
Q  290 ttaataaatcagattttgatggattttgt 318  Q
    |||||||||  ||||||||||||||||||    
T  39028204 ttaataaattggattttgatggattttgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 44256895 - 44256825
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  ||||| |||| ||||||| |||||    
T  44256895 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaattttgttggatt 44256825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 17001152 - 17001099
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  17001152 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 47066631 - 47066712
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaa-tcttgtggtattcattcaagactcttt 147  Q
    |||||||||| | ||||||| | ||||| |||||||||||| || ||||||||| |||||||||||||| |||| |||||||    
T  47066631 tgtattggattaggattctatgggatttaaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaaaactcttt 47066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 47066775 - 47066828
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  47066775 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 37972981 - 37972926
Alignment:
Q  269 attcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||| |||||||| ||||||||||  ||||||||||||||||| ||||||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggatt 37972926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 41827224 - 41827275
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaaga 141  Q
    |||||||||||||||||| || |||||||| |||||||||||||| ||||||    
T  41827224 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 41827275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 1470362 - 1470293
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| | |||||||||| ||| |||||||||| ||| |||||||||| | ||||||||||||    
T  1470362 gtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggatt 1470293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 48399727 - 48399805
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagac 142  Q
    |||||||||| ||  ||||| || |||||||||||||||||||| |  || |||||||||||||||| ||| |||||||    
T  48399727 gggtgtattgaattgtgattttatgagattttaaaagactttttaaaaataaaaaaatcttgtggtaatcaatcaagac 48399805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 3634239 - 3634292
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||| || ||||| ||||||| |||||| ||||||||    
T  3634239 gattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagact 3634292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 34115531 - 34115478
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||||||||||| || || |||||||||||| ||||||| ||||||||    
T  34115531 gattttaaaagactttttaatgataaaaaaatcttgtagtattcaatcaagact 34115478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 12740273 - 12740325
Alignment:
Q  80 gattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtatt 132  Q
    ||||||| |||||||||||||||||||| || |||||||||||| ||| ||||    
T  12740273 gattctatgagattttaaaagactttttaattatgaaaaaatctggtgatatt 12740325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 32883659 - 32883735
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattca 134  Q
    ||||| || |||||||||| ||||||||| | |||||||||||| ||||| || |||||||| | ||||| ||||||    
T  32883659 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatgaaaaagttttgtgatattca 32883735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 33892379 - 33892315
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| ||||||||||| ||| ||||||| |||||||  |||||| ||| |||||||    
T  33892379 gtggtattcaaaatcattcaaatttcgaatgattgttaaataaattggatttttatgaattttgt 33892315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 42678275 - 42678199
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||| |||| ||||  |||||||||||||||||||||| || || ||||||||| ||| |||||| | ||||||    
T  42678275 tgtattgaatcaagatttcaagagattttaaaagactttttaatgataaaaaaatctggtgatattcaattaagact 42678199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 447854 - 447913
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggat 313  Q
    |||||||| |||| ||||||||||| ||| ||||||||||| |||  |||||||||||||    
T  447854 gtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 29893072 - 29893139
Alignment:
Q  170 tattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 237  Q
    ||||||||||||| ||||||||||||       |||||| ||||||||||||||||| || |||||||    
T  29893072 tattcaatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcactt 29893139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 31472098 - 31472028
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattca 134  Q
    ||||||||||||| |  ||| ||||| | ||||||||| |||||||||||  |||||| ||||||||||||    
T  31472098 gggtgtattggattaaaattataagatagtttaaaagatttttttatcatacaaaaattttgtggtattca 31472028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 44623485 - 44623418
Alignment:
Q  170 tattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 237  Q
    ||||||||||||| ||||||||||||       ||| ||||||||| ||||||||||||| |||||||    
T  44623485 tattcaatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactt 44623418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 6e-71; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 56 - 324
Target Start/End: Original strand, 21146949 - 21147214
Alignment:
Q  56 atttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt- 154  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| |||||||||||| ||||||     
T  21146949 atttaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaattta 21147048  T
Q  155 nnnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctag 254  Q
             |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    ||||    
T  21147049 aaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctag 21147144  T
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21147145 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 21147214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 55 - 324
Target Start/End: Complemental strand, 33656368 - 33656100
Alignment:
Q  55 aatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  33656368 aatttaggagggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 33656269  T
Q  155 -nnnnnnnnnttgtattattcaatcaagattc--tttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagc 251  Q
              |||| |||||||||||||||||  ||||||||||       ||| |||||||||||||||||||||||||||||||           | |    
T  33656268 aaaaaaagtcttgtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaa----atc 33656173  T
Q  252 tagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    || |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33656172 taatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 33656100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 60 - 324
Target Start/End: Original strand, 6460678 - 6460939
Alignment:
Q  60 aggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnn 158  Q
    |||||||||||||| |||||||||||||| |||||||||||| |||||||| |||||||| |||||||||||||| |||||||||||| ||| ||         
T  6460678 aggagggtgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaaa 6460777  T
Q  159 nnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggt 258  Q
         || | |||||||||||||||||||||||||||       ||||||| |||||||||||||||||||||||| ||           | ||||||||    
T  6460778 aagtcttatgttattcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaa----atctagtggt 6460873  T
Q  259 attcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||    
T  6460874 attcaaaatcattcaaatttcgaaggtttgtttaataaatcagattttgatggattttgagggatt 6460939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 63 - 324
Target Start/End: Complemental strand, 27459266 - 27459009
Alignment:
Q  63 agggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnn 162  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||| ||| || ||||||| |||||||||||| ||||||            
T  27459266 agggtgtattggatcatgattctaacggattttaaaaaacttttttatcatgaaaaagtctcgtagtattcaatcaagactctttccaatttaaaaaaag 27459167  T
Q  163 n-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtatt 261  Q
      |||| ||||||||| |||||||||||||||||       ||| ||| |||||||||||||||||||||||||||       ||||||    |||||||    
T  27459166 tcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctag----tggtatt 27459072  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27459071 caaaatcattcagattttgaaggattgtttaataaattagattttgatggattttgtgggatt 27459009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 32158215 - 32157956
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt--nnnnnnn 161  Q
    |||| ||||| ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||             
T  32158215 gggtatattgaatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaaag 32158116  T
Q  162 nnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt-nnnnnnngtctagctagtggtat 260  Q
      |||| |||||||||||||||||||||||||||       ||| ||||||||||||||||||| | |||||||||        ||    ||||||||||    
T  32158115 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagt----ctagtggtat 32158020  T
Q  261 tcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  32158019 tcaaaatcattcaaatttcgaaggattgtttaataaattagattttgacggattttgtgggatt 32157956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 92 - 324
Target Start/End: Original strand, 139191 - 139420
Alignment:
Q  92 ttttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnntt-gtattattcaatcaagattctttgt 190  Q
    ||||||||||||||||||| |||||||| |||| | ||||||| |||||||||||||||||||         || || ||||||||||||||||||||||    
T  139191 ttttaaaagacttttttataatgaaaaagtcttttagtattcaatcaagactcttttcaatttaaaaaaagttttgtgttattcaatcaagattctttgt 139290  T
Q  191 catttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtt 290  Q
    |||||       |||||||||||||||||||||||| ||||||||||       ||||||    |||||||||||| ||||||||||| |||||||||||    
T  139291 catttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaggattgtt 139386  T
Q  291 taataaatcagattttgatggattttgtgggatt 324  Q
    ||||||| |||||||||||||||||||| |||||    
T  139387 taataaaccagattttgatggattttgttggatt 139420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 7017021 - 7016923
Alignment:
Q  55 aatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  7017021 aatttagg-gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 7016923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 56 - 324
Target Start/End: Complemental strand, 14000429 - 14000164
Alignment:
Q  56 atttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttn 155  Q
    ||||||| || |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||     
T  14000429 atttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattta 14000330  T
Q  156 nnnnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctag 254  Q
             ||||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |        
T  14000329 aaaaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg---- 14000234  T
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  14000233 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggatt 14000164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 170 - 324
Target Start/End: Complemental strand, 5273128 - 5272978
Alignment:
Q  170 tattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagca 269  Q
    ||||||||||||||||||||||||||       ||| | |||||||||||||||||||||||||| ||       ||||||    |||||||||||| ||    
T  5273128 tattcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctag----tggtattcaaaatca 5273033  T
Q  270 ttcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  5273032 ttcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggatt 5272978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 67 - 324
Target Start/End: Complemental strand, 1152416 - 1152162
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | ||||||| |||||||||||||||||||| || ||||||||||||||||||||| | |||||| | ||| ||| ||          ||    
T  1152416 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagattttttgcaacttaaaaaaagtctt 1152317  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    |||||||||||    
T  1152316 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttg----tggtattcaaa 1152221  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| || ||||||||||||||||  ||||||||||||||||||||||||    
T  1152220 atcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggatt 1152162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 211 - 324
Target Start/End: Complemental strand, 7016907 - 7016798
Alignment:
Q  211 gtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatg 310  Q
    |||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  7016907 gtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 7016812  T
Q  311 gattttgtgggatt 324  Q
    ||||||||||||||    
T  7016811 gattttgtgggatt 7016798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 67 - 318
Target Start/End: Complemental strand, 4240765 - 4240517
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||||||| | |||||||||||| |||||||| ||| ||| ||          ||    
T  4240765 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaatctt 4240666  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    |||||||||||    
T  4240665 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttg----tggtattcaaa 4240570  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    | ||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  4240569 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 4240517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 43319128 - 43319218
Alignment:
Q  56 atttaggagggtgtattggatcatgattctaagagattttaaaagac-ttttttatcatgaaaaaatcttgtggtattcattcaagactct 145  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  43319128 atttaggggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactct 43319218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 58 - 320
Target Start/End: Complemental strand, 4550579 - 4550320
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnn 157  Q
    ||||| || |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||| ||       
T  4550579 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 4550480  T
Q  158 nnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtg 256  Q
           ||||  ||||||||||||| ||||||||||||       | | || ||||||||||||||||| || |||||||       |||| |    ||    
T  4550479 aaaagtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttg----tg 4550384  T
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    |||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  4550383 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgg 4550320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 849181 - 849294
Alignment:
Q  207 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 306  Q
    |||||||||||||||||||||||||||||||       |||||     |||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  849181 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctaa----tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 849276  T
Q  307 gatggattttgtgggatt 324  Q
    ||| ||||||||||||||    
T  849277 gatagattttgtgggatt 849294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 5273276 - 5273187
Alignment:
Q  66 gtgtattggatcatgattctaagagattttaaaagacttttttatcatgaa-aaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||    
T  5273276 gtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaaaatcttgtggtattcaatcaagattctttccaattt 5273187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 307
Target Start/End: Original strand, 37013807 - 37014044
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnnnnnnntt 165  Q
    |||||||||| ||||||||| |||||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||| ||          ||    
T  37013807 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 37013906  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| ||    ||||||||||    
T  37013907 gtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgc----ggtattcaaa 37014002  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    | ||||||||||| ||||| |||||||||||||  |||||||    
T  37014003 atcattcaaatttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 13926008 - 13926078
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  13926008 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 13926078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 16894174 - 16894086
Alignment:
Q  65 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||||| ||||||    
T  16894174 ggtgtattggatcataattctaagggattttaaaagacttttttatcat-aaaaattcttgtggtattcaatcaaaattctttccaattt 16894086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 9689553 - 9689633
Alignment:
Q  66 gtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||||||||| ||||||||||| |||||||| ||||||||| || |||||||| |||||||||||||| ||||||||||||    
T  9689553 gtgtattggattatgattctaagggattttaatagacttttt-attatgaaaaagtcttgtggtattcaatcaagactcttt 9689633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 5949185 - 5949249
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  5949185 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 5949249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 7947698 - 7947636
Alignment:
Q  258 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    ||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  7947698 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgg 7947636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 14465356 - 14465290
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||| |||||||||| |||||||||    
T  14465356 gtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcggattttgatgaattttgtgg 14465290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 39852422 - 39852492
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||  |||||||||||||||| |||||||    
T  39852422 gtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggattttgatggattttatgggatt 39852492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 1461263 - 1461203
Alignment:
Q  258 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  1461263 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 1461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 22746378 - 22746443
Alignment:
Q  258 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggat 323  Q
    ||||||||| ||||||||||| ||| |||||||||||||||   ||||||||||||||||||||||    
T  22746378 tattcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtgggat 22746443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 26795691 - 26795638
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||| || |||||||||||||||||||| ||||||||    
T  26795691 gattttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagact 26795638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 7948630 - 7948554
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | |||||||   ||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||    
T  7948630 tgtattggattaggattctataggattttaaaagacttttttattatgaaaaagtctcgtggtattcaatcaagact 7948554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 134
Target Start/End: Original strand, 27786209 - 27786280
Alignment:
Q  63 agggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattca 134  Q
    |||||||||||||| | ||||  ||| ||||||||||||||||||||| || ||||| ||||||||||||||    
T  27786209 agggtgtattggattaagatttcaagggattttaaaagacttttttattataaaaaagtcttgtggtattca 27786280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 26806755 - 26806702
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||| || ||||||||||||| |||||| ||||||||    
T  26806755 gattttaaaagacttttttattataaaaaaatcttgtgatattcaatcaagact 26806702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 40013827 - 40013767
Alignment:
Q  258 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||| ||||||||||| ||||||||||||||| |||  |||||| |||||||||||    
T  40013827 tattcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggattttgt 40013767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 1511642 - 1511587
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactct 145  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||||||    
T  1511642 gattttaaaagacatttttattatgaaaaagtcttgtggtgttcaatcaagactct 1511587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 28594511 - 28594449
Alignment:
Q  80 gattctaagagattttaaaagactt-ttttatcatgaaaaaatcttgtggtattcattcaaga 141  Q
    |||| |||||||||||||||||||| |||||| || ||||| |||||||||||||| ||||||    
T  28594511 gattttaagagattttaaaagactttttttattataaaaaagtcttgtggtattcaatcaaga 28594449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 9689398 - 9689343
Alignment:
Q  86 aagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaaga 141  Q
    |||||||||||||||| ||||| || || ||||||||||| |||||||| ||||||    
T  9689398 aagagattttaaaagattttttaattataaaaaaatcttgaggtattcaatcaaga 9689343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 22746190 - 22746256
Alignment:
Q  67 tgtattggatcatgattcta-agagattttaaaagacttttttatcatgaaaaaatcttgtggtattc 133  Q
    |||||||||| | ||||||| ||| ||||||||||||||||| || |||||||| |||||||||||||    
T  22746190 tgtattggattaggattctataga-attttaaaagactttttaattatgaaaaagtcttgtggtattc 22746256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 324
Target Start/End: Original strand, 9689693 - 9689804
Alignment:
Q  208 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    |||||||||||||||||||||| |||||||       |||| |    ||||||| |||| |||| |||||| ||| |||||||| |||||| ||||||||    
T  9689693 gtggtattcaatcaagactcttcatcacttaaaaaaagtcttg----tggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttg 9689787  T
Q  308 atggattttgtgggatt 324  Q
    ||||||| |||| ||||    
T  9689788 atggattgtgtgagatt 9689804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 237
Target Start/End: Complemental strand, 16894074 - 16894044
Alignment:
Q  207 tgtggtattcaatcaagactcttaatcactt 237  Q
    |||||||||||||||||||||||||||||||    
T  16894074 tgtggtattcaatcaagactcttaatcactt 16894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 849166 - 849203
Alignment:
Q  109 atcatgaaaaaatcttgtggtattcattcaagactctt 146  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  849166 atcatgaaaaagtcttgtggtattcaatcaagactctt 849203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 2276263 - 2276210
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||| ||||||||| || ||||||| | |||||||||| ||||||||    
T  2276263 gattttaaaagtcttttttataataaaaaaatttagtggtattcaatcaagact 2276210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 13925847 - 13925900
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||||| ||||| || |||||||| |||||||||||| | ||||||||    
T  13925847 gattttaaaagattttttaattatgaaaaagtcttgtggtatttaatcaagact 13925900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 14465501 - 14465452
Alignment:
Q  105 ttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    ||||||||||||||| |||||||||||||| | || ||||||| ||||||    
T  14465501 ttttatcatgaaaaagtcttgtggtattcaattaaaactctttccaattt 14465452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 5949006 - 5949074
Alignment:
Q  71 ttggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaa 139  Q
    |||||| | ||||||| | ||||||||||||| |||| || |||||||| | |||||||||||| ||||    
T  5949006 ttggattaggattctatgggattttaaaagaccttttaattatgaaaaatttttgtggtattcaatcaa 5949074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 26806633 - 26806581
Alignment:
Q  91 attttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||| ||||||| || || ||||| |||||||||||||| ||||||||    
T  26806633 attttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagact 26806581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 64 - 324
Target Start/End: Original strand, 21222031 - 21222287
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||             
T  21222031 gggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt 21222130  T
Q  164 ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattca 263  Q
    |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    |||| ||||||||    
T  21222131 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagaggtattca 21222226  T
Q  264 aaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  21222227 aaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggatt 21222287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 64 - 324
Target Start/End: Original strand, 35279555 - 35279812
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||             
T  35279555 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaga 35279654  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||| ||||||||||       ||    ||||||||||||    
T  35279655 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagt----ctagtggtattc 35279750  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35279751 aaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 35279812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 45760327 - 45760069
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||| |||| ||||||||||||||             
T  45760327 gggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaaaaaaagt 45760228  T
Q  163 nttgtattattcaatcaagattctttgtc-atttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtatt 261  Q
     |||| ||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||||||||       ||    |||||||||||    
T  45760227 cttgtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtatt 45760132  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  45760131 caaaatcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 45760069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 49198584 - 49198329
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn 163  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||             
T  49198584 gggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaagtc 49198485  T
Q  164 ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattca 263  Q
    |||| |||||||||||||||||||||||||||       ||  ||||||||||||| |||||||||||||||||       ||      |||||||||||    
T  49198484 ttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagt----tcagtggtattca 49198390  T
Q  264 aaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49198389 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 49198329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 28824689 - 28824433
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||  |||||             
T  28824689 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaagt 28824590  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||| ||||||||||       ||| |||||||||||||||||||||||||||||||       ||    || |||||||||    
T  28824589 cttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagt----cttgtggtattc 28824494  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  28824493 aaaatcattcaaatttcgaa-gattgtttaataaatcagattttgatggattttgtgggatt 28824433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 58 - 324
Target Start/End: Complemental strand, 50192874 - 50192610
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnn 157  Q
    ||||| |||||||||| ||||||||||||||  |||||||||||||||||||| |||||||| |||||||||||||| |||||| ||||| ||||||       
T  50192874 ttaggggggtgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagattctttccaatttaaa 50192775  T
Q  158 nnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctag-ctagt 255  Q
           |||| ||||||||||||||||| |||||||||       ||| |||||||||||||||||||||||||||||||           || |||||    
T  50192774 aaaaatcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaa----agtctagt 50192679  T
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50192678 ggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 50192610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 64 - 324
Target Start/End: Original strand, 49417967 - 49418224
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||| |||||||||||| ||||||             
T  49417967 gggtatattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtgatattcaatcaagactctttccaatttagaaaaagt 49418066  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| ||||||||||||||||| |||||||||        | |||||||||||||| |||||||||||||||||       ||    ||||||||||||    
T  49418067 cttgtgttattcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagt----ctagtggtattc 49418162  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  49418163 aaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggatt 49418224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 64 - 324
Target Start/End: Original strand, 730032 - 730289
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||| ||||||             
T  730032 gggtgtattggatcatgattctaagggattttaaaagactttttt-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 730130  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt-nnnnnnngtctagctagtggtatt 261  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||        ||    |||||||||||    
T  730131 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagt----ctagtggtatt 730226  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||| ||||||||||| || | ||||||||||||||||||||||||||||||||||| ||||    
T  730227 caaaatcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgtgagatt 730289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 6304571 - 6304312
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn 163  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||| ||||||             
T  6304571 gggtgtattggatcatgattctaaaggattttaaaagacttttttttcatgaaaaagtcttgtggtattcaatcaagactatttccaatttaaaaaaaag 6304472  T
Q  164 t--tgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaaga-ctcttaatcacttnnnnnnngtctagctagtggtat 260  Q
    |  ||| |||||||||||||||||||||||||||       ||| |||||||||||| ||| | |||||||||||||       ||||||    ||||||    
T  6304471 tactgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctag----tggtat 6304376  T
Q  261 tcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6304375 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 6304312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 56 - 324
Target Start/End: Complemental strand, 35679453 - 35679188
Alignment:
Q  56 atttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt- 154  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||     
T  35679453 atttaggagggtgtattgaatcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaaggctcttttcaattta 35679354  T
Q  155 nnnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctag 254  Q
             ||||  ||||||||||||||||||||||||||        || ||| |||||||||||||||||||||||||||       ||    |  |    
T  35679353 aaaaaagtcttgtggtattcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagt----catg 35679258  T
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  35679257 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttgatgggatt 35679188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 66 - 320
Target Start/End: Complemental strand, 47654669 - 47654415
Alignment:
Q  66 gtgtattggatcatgattctaagagattttaaaagactt-ttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt--nnnnnnnn 162  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||  |||||||||||| ||||||              
T  47654669 gtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcgatcaagactctttccaatttaaaaaaagtc 47654570  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt-nnnnnnngtctagctagtggtatt 261  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||| ||||||||||||||        ||    |||||||||||    
T  47654569 tttgtgttattcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagt----ctagtggtatt 47654474  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    |||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47654473 caaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 47654415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 64 - 237
Target Start/End: Original strand, 953702 - 953876
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||             
T  953702 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 953801  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 237  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||| ||||||||||||||||||||    
T  953802 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagactcttaatcactt 953876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 64 - 237
Target Start/End: Original strand, 22183253 - 22183427
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||             
T  22183253 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 22183352  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 237  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||| ||||||||||||    
T  22183353 tttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcactt 22183427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 64 - 316
Target Start/End: Original strand, 33025395 - 33025645
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |   ||| ||||||             
T  33025395 gggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaaaaaattttccaatttaaaaaaagt 33025494  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatc-aagactcttaatcacttnnnnnnngtctagctagtggtatt 261  Q
     |||| ||||||||||||||||||||| |||||        || |||||||||||||| || ||||||||||||||       ||    || ||||||||    
T  33025495 tttgtcttattcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagt----cttgtggtatt 33025590  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||  |||||||    
T  33025591 caaaatcattcaaattttgaaggattgtttaatacatcagattttgtgggatttt 33025645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 47780494 - 47780592
Alignment:
Q  56 atttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  47780494 atttaggagggtgtattggatcatgattctaagaaattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 47780592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 115 - 324
Target Start/End: Complemental strand, 19452074 - 19451868
Alignment:
Q  115 aaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggta 213  Q
    ||||| |||||||||||||| |||||||||||| ||||||          |||| |||||||||||||||||||||||||||       ||| |||||||    
T  19452074 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggta 19451975  T
Q  214 ttcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggat 313  Q
    || |||||||||||||||||||||       ||||||    |||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  19451974 tttaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggat 19451879  T
Q  314 tttgtgggatt 324  Q
    |||||||||||    
T  19451878 tttgtgggatt 19451868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 69 - 324
Target Start/End: Original strand, 48524208 - 48524459
Alignment:
Q  69 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgt 167  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||| ||||| | |||  ||||||| |||||||||||| ||||||          ||||    
T  48524208 tattggatcatgattctaaggaattttaaaagacttttt-atcataaaaaagttttgcagtattcaatcaagactctttccaatttaaaaaaagtcttgt 48524306  T
Q  168 attattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaag 267  Q
     |||||||||||||||| ||||||||||        |||||||||||| |||||| ||||||||||||||       |||| |    || |||||||||     
T  48524307 gttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttg----tgatattcaaaat 48524402  T
Q  268 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  48524403 cattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggatt 48524459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 54 - 324
Target Start/End: Original strand, 6312447 - 6312714
Alignment:
Q  54 aaatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatt 153  Q
    ||||||||| || |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| |||||    
T  6312447 aaatttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatt 6312546  T
Q  154 tnnnnnnnnntt-gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagct 252  Q
    |         || ||  |||||||| |||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |      
T  6312547 taaaaaaagttttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg-- 6312644  T
Q  253 agtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
      |||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  6312645 --tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 6312714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 56 - 324
Target Start/End: Complemental strand, 32589279 - 32589013
Alignment:
Q  56 atttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttn 155  Q
    ||||||| || |||||||||| ||||||||| |||||||||||| ||||||||||||||||||| |  ||| ||||||| |||||||||||||||| ||     
T  32589279 atttagggggatgtattggattatgattctatgagattttaaaaaacttttttatcatgaaaaagttatgttgtattcaatcaagactcttttcaacttt 32589180  T
Q  156 nnnnnnnnttgtat--tattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagcta 253  Q
            |  | |  ||||||||||||| ||||| |||||         || ||||| ||||||||||||||||| |||||||       |||| |       
T  32589179 aaaaaaaatcttctggtattcaatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttg--- 32589083  T
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
     |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  32589082 -tggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagatt 32589013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 19452167 - 19452077
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||| ||||||    
T  19452167 gggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaagtcttgtggtattcaatcaagactctttccaattt 19452077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 115 - 324
Target Start/End: Original strand, 47780644 - 47780851
Alignment:
Q  115 aaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnnt--tgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggt 212  Q
    ||||| ||||||| |||||| |||||||||||||||||||         |  ||| |||||||||||||||| | ||||||||       ||||||||||    
T  47780644 aaaaagtcttgtgttattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggt 47780743  T
Q  213 attcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatgga 312  Q
    |||||||||||||||||||||||||       ||||||    || ||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||    
T  47780744 attcaatcaagactcttaatcacttaaaaaaagtctag----tgatattcaaaatcattcaaaattaaaaggattgtttaataaatcagattttgatgga 47780839  T
Q  313 ttttgtgggatt 324  Q
    ||||||||||||    
T  47780840 ttttgtgggatt 47780851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 324
Target Start/End: Original strand, 45535928 - 45536084
Alignment:
Q  164 ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattca 263  Q
    |||| |||||||||||| ||||||||||||||       ||  ||||||||||||||||||||||||||| |||       ||||||    |||||||||    
T  45535928 ttgtgttattcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctag----tggtattca 45536023  T
Q  264 aaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  45536024 aaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggatt 45536084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 25612043 - 25612297
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnntt 165  Q
    |||||||||| | ||||||| | |||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||| ||||||          ||    
T  25612043 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 25612142  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||| | || |||| ||       ||    || ||||||||||||    
T  25612143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagt----cttgtggtattcaaa 25612238  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | |||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||    
T  25612239 atcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggatt 25612297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 195
Target Start/End: Original strand, 14494095 - 14494224
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||             
T  14494095 gggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagt 14494191  T
Q  163 nttgtattattcaatcaagattctttgtcattt 195  Q
     |||| |||||||||||||||||||||||||||    
T  14494192 cttgtgttattcaatcaagattctttgtcattt 14494224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 324
Target Start/End: Original strand, 29556006 - 29556244
Alignment:
Q  79 tgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgtattattcaat 177  Q
    |||||||||| |||||||||||||||||||||    ||||| | |||||||||||| |||||||||||||||||||          |||| |||||||||    
T  29556006 tgattctaagggattttaaaagacttttttat----aaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaat 29556101  T
Q  178 caagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaatt 277  Q
     ||||||| |||| ||||       ||| |||| ||||||||||||||||||||||||||        |||||    || ||||||||| ||||||||||    
T  29556102 taagattcattgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctag----tgttattcaaaatcattcaaatt 29556197  T
Q  278 ttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||| ||||||||||||||| ||||||||||||||||| |||||||    
T  29556198 tcgaaagattgtttaataaattagattttgatggattttatgggatt 29556244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 324
Target Start/End: Complemental strand, 29396702 - 29396448
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | ||||||| |  ||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||          ||    
T  29396702 tgtattggattaggattctatggtattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaatctt 29396603  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
     |  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |    |||||||||||    
T  29396602 ttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg----tggtattcaaa 29396507  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  29396506 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 29396448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 58 - 324
Target Start/End: Complemental strand, 9322823 - 9322560
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nn 156  Q
    ||||| || |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||       
T  9322823 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 9322724  T
Q  157 nnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtg 256  Q
           ||||  ||||||||||||| ||||||||||||       ||| || ||||||| ||||||||| || |||| ||       |||   || |||    
T  9322723 aaaaaatttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtc---ct-gtg 9322628  T
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||| ||||||||||| |||||||||||||||||||   ||||||||||||||| |||||||    
T  9322627 gtattcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggatt 9322560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 69 - 324
Target Start/End: Complemental strand, 28387705 - 28387453
Alignment:
Q  69 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgt 167  Q
    |||||||| | ||||||| | |||||||||||||||||| || |||||||| |||| ||||||||| |||||||| ||| ||||||          || |    
T  28387705 tattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaagtctttt 28387606  T
Q  168 attattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaag 267  Q
      ||||||||||||||||||||||||||       ||| || ||||||||||||||||| || |||| ||        ||| |    |||||||||||      
T  28387605 ggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttg----tggtattcaaatt 28387510  T
Q  268 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  28387509 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 28387453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 31572327 - 31572257
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31572327 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 31572257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 324
Target Start/End: Original strand, 46327931 - 46328182
Alignment:
Q  70 attggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgta 168  Q
    ||||||| | ||||||| | |||||||||||||||||| || |||||||| ||||||| |||||| |||| ||| ||| ||| ||          ||||     
T  46327931 attggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtgttattcaatcaaaactttttgcaacttaaaaaaagtcttgtg 46328030  T
Q  169 ttattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagc 268  Q
     ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    |||||||||||| |    
T  46328031 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcg----tggtattcaaaatc 46328126  T
Q  269 attcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||| ||||||||||||||| |||  ||||||||||||||||||||||||    
T  46328127 attcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggatt 46328182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 51701650 - 51701720
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  51701650 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 51701720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 31572470 - 31572405
Alignment:
Q  74 gatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaa 139  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  31572470 gatcatgattctaagggattttaagagacttttttatcatgaaaaagtcttgtggtattcattcaa 31572405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 324
Target Start/End: Complemental strand, 15835367 - 15835113
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnntt 165  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||          ||    
T  15835367 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 15835268  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || |||||||||||||||||  | |||| ||           | || ||||||||||||    
T  15835267 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaa----atcttgtggtattcaaa 15835172  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||   ||||||||||||||||||  |||||||||||||||| |||||||    
T  15835171 atcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggatt 15835113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 48177592 - 48177522
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  ||||||||||||||||||||||||    
T  48177592 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggatt 48177522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 70 - 307
Target Start/End: Original strand, 18798380 - 18798614
Alignment:
Q  70 attggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnnnnnnnttgta 168  Q
    ||||||| | ||||||| |||||||||||||||||||| || |||||||  |||||||||||||| |||||||| ||| ||| ||          ||||     
T  18798380 attggattaggattctatgagattttaaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtg 18798479  T
Q  169 ttattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagc 268  Q
     ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       ||    || ||||||||||||| |    
T  18798480 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagt----cttgtggtattcaaaatc 18798575  T
Q  269 attcaaattttgaaggattgtttaataaatcagattttg 307  Q
    |||||||||| |||||||||||||||||||  |||||||    
T  18798576 attcaaatttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 316
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    |||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 9577558 - 9577492
Alignment:
Q  258 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||| ||||    
T  9577558 tattcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagatt 9577492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 29219356 - 29219420
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||  ||||||||||||||||||    
T  29219356 gtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgt 29219420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 298
Target Start/End: Original strand, 49230758 - 49231000
Alignment:
Q  53 aaaatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttc-aa 151  Q
    |||| ||||| || |||||||||| | |||| || | |||||||||||||||||| || |||||||| || ||||||||||| |||||||| ||| | ||    
T  49230758 aaaacttagggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaaa 49230857  T
Q  152 tttnnnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagc 251  Q
    ||          ||||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       ||    |    
T  49230858 ttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagt----c 49230953  T
Q  252 tagtggtattcaaaagcattcaaattttgaaggattgtttaataaat 298  Q
    | ||||||||||||| ||||||||||| |||||||| ||||||||||    
T  49230954 ttgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 28541387 - 28541437
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatg 114  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  28541387 gggtgtattggatcatgattctaagcgattttaaaagatttttttatcatg 28541437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 5495410 - 5495334
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | ||||||| |||||||||||| ||||||| || |||||||| || ||||||||||| ||||||||    
T  5495410 tgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcatgtggtattcaatcaagact 5495334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 8141442 - 8141366
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||| || | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| ||||||||    
T  8141442 tgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 8141366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 9577746 - 9577662
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa 151  Q
    |||||||||| | ||||| ||| |||||||||||||||||| || |||||||| | |||||||||||| |||||||| ||| |||    
T  9577746 tgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaagttttgtggtattcaatcaagactatttgcaa 9577662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 38536219 - 38536155
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    |||||||||||||  ||||||||||  ||||||||||||||||||  ||||||||||||||||||    
T  38536219 gtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgt 38536155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 38558437 - 38558373
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    |||||||||||||  ||||||||||  ||||||||||||||||||  ||||||||||||||||||    
T  38558437 gtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgt 38558373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 45272473 - 45272549
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||||| |||||||||||| | ||||||    
T  45272473 tgtattggattaagattctatgggattttaaaagactttttaattatgaaaaaatattgtggtattcaataaagact 45272549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 29219163 - 29219250
Alignment:
Q  56 atttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||| || |||||||||| | |||| || |  ||||||||||||||||| || |||||||| |||||||||||||| ||||||||    
T  29219163 atttagggggatgtattggattaggattatatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 29219250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 42657714 - 42657793
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||||||   ||||  |||||||||||||||||||||| || || ||||| |||||||||||||| ||||||||    
T  42657714 gggtgtattggattgagatttcaagagattttaaaagactttttaattataaaaaagtcttgtggtattcaatcaagact 42657793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 51826924 - 51826841
Alignment:
Q  60 aggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||| |||||||| || | ||||  ||| |||||||||||||||||| || || |||||||||||||||||||| ||||||||    
T  51826924 aggagagtgtattgaattaagatttgaagggattttaaaagactttttaataataaaaaaatcttgtggtattcaatcaagact 51826841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 320
Target Start/End: Original strand, 51085865 - 51085931
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    |||||||||||||  ||||||||||||||||||| || |||||||  |||||||||| |||||||||    
T  51085865 gtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtgg 51085931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 19007637 - 19007584
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||    
T  19007637 gattttaaaagacttttttataatgaaaaagtctagtggtattcaatcaagact 19007584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 19893441 - 19893526
Alignment:
Q  54 aaatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaa 139  Q
    ||||||||| |||||||||| || | |||| |||| |||||||||||||||||| || || |||||||||||  ||||||| ||||    
T  19893441 aaatttaggtgggtgtattgaattaagattttaagggattttaaaagactttttaatgataaaaaaatcttggagtattcaatcaa 19893526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 25831213 - 25831144
Alignment:
Q  74 gatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||||||||  ||||||||||||||||| || ||||||||||||| || |||||| | ||||||    
T  25831213 gatcatgattctaaggaattttaaaagactttttaattatgaaaaaatcttttgatattcaattaagact 25831144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 27198264 - 27198346
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaa 139  Q
    ||||||||||||||||||||   || | |||| ||||||||||||||||||  | || ||||| |||||||||||||| ||||    
T  27198264 tttaggagggtgtattggattgagactttaagggattttaaaagactttttgtttataaaaaagtcttgtggtattcaatcaa 27198346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 42290732 - 42290802
Alignment:
Q  69 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaa 139  Q
    |||||||| | ||||||| | |||||||||||| ||||| || |||||||| |||||||||||||| ||||    
T  42290732 tattggattaagattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaa 42290802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 38536338 - 38536281
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||||||||||||||||  | || ||||| |||||||||||||| ||||||||||||    
T  38536338 gattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactcttt 38536281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 38558556 - 38558499
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||||||||||||||||  | || ||||| |||||||||||||| ||||||||||||    
T  38558556 gattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactcttt 38558499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 48194616 - 48194669
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||  |||||||| ||| |||||||||| ||||||||    
T  48194616 gattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagact 48194669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 48203374 - 48203427
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||  |||||||| ||| |||||||||| ||||||||    
T  48203374 gattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagact 48203427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 48177776 - 48177692
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa 151  Q
    |||||||||| | ||||||| | ||||||||||   ||||| || |||||||| |||||||||||||| |||||||| ||| |||    
T  48177776 tgtattggattaagattctatgggattttaaaatgttttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 48177692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 47780598 - 47780637
Alignment:
Q  115 aaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  47780598 aaaaaatcttgtgttattcaatcaagactcttttcaattt 47780637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 31622586 - 31622536
Alignment:
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    |||||||||| |||||||||||  || |||||||||||||||| |||||||    
T  31622586 gtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 37014766 - 37014700
Alignment:
Q  258 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||| |||||||||||  || |||||||| ||||||   ||||||||||||||||| |||||    
T  37014766 tattcaaaatcattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggatt 37014700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 43885203 - 43885157
Alignment:
Q  271 tcaaattttgaaggattgtttaataaatcagattttgatggattttg 317  Q
    |||||||||||| |||| ||||||||||  |||||||||||||||||    
T  43885203 tcaaattttgaatgattatttaataaattggattttgatggattttg 43885157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 14555369 - 14555316
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||||||||    
T  14555369 gattttaaaagacttttttataataaaaaagtttggtggtattcaatcaagact 14555316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 48668905 - 48668852
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||    
T  48668905 gtggtattcaaaattattcaaatttcgaaagattgtttaataaattggattttg 48668852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 51287396 - 51287437
Alignment:
Q  91 attttaaaagacttttttatcatg-aaaaaatcttgtggtat 131  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  51287396 attttaaaagacttttttatgatgaaaaaaatcttgtggtat 51287437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 1e-69; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 62 - 324
Target Start/End: Complemental strand, 7507217 - 7506958
Alignment:
Q  62 gagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnn 160  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||           
T  7507217 gagggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 7507118  T
Q  161 nnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtat 260  Q
       |||| |||||||||| |||||| |||||||||       ||| |||||||||||||||||||||||||||||||       ||    ||||||||||    
T  7507117 agtttgtgttattcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtat 7507022  T
Q  261 tcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7507021 tcaaaaccattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 7506958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 23115484 - 23115228
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||             
T  23115484 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 23115385  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    ||||||||||||    
T  23115384 cttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattc 23115289  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
     ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23115288 -aaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggatt 23115228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 67 - 324
Target Start/End: Complemental strand, 26374741 - 26374489
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnnttg 166  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||         |||    
T  26374741 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaattt-aaaaaaagttg 26374643  T
Q  167 tattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaa 266  Q
    | |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    ||||||||||||||||    
T  26374642 tgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattcaaaa 26374547  T
Q  267 gcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
     ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  26374546 tcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggatt 26374489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 42735593 - 42735336
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||             
T  42735593 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 42735494  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||| ||||||       | | ||||||||||||| |||||||||||||||||       ||    ||||||||||||    
T  42735493 cttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagt----ctagtggtattc 42735398  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  42735397 aaaatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggatt 42735336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 62 - 324
Target Start/End: Complemental strand, 42938435 - 42938176
Alignment:
Q  62 gagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnn 161  Q
    |||||| |||||||| || ||| |||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||           
T  42938435 gagggtttattggattataattttaagggattttaaaagacttttttaccatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 42938336  T
Q  162 nn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtat 260  Q
       |||| |||||||||||||||| ||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    ||||||    
T  42938335 gtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtat 42938240  T
Q  261 tcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42938239 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 42938176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 64 - 307
Target Start/End: Complemental strand, 32711598 - 32711358
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||             
T  32711598 gggtgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaagt 32711499  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    ||||||||||||    
T  32711498 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattc 32711403  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||    
T  32711402 aaaatcatttaaatttcgaaggattgtttaataaatcagattttg 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 2705135 - 2704878
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttc-aatttnnnnnnnn 162  Q
    |||||||||||||||||||| |||  |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| | ||||             
T  2705135 gggtgtattggatcatgattgtaaaggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaaattaaaaaaagt 2705036  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    ||||||||||||    
T  2705035 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattc 2704940  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||    
T  2704939 aaaatcattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggatt 2704878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 316
Target Start/End: Original strand, 41478989 - 41479236
Alignment:
Q  66 gtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnnt 164  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||          |    
T  41478989 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagttt 41479088  T
Q  165 tgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaa 264  Q
    ||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    ||| ||||||||||    
T  41479089 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctaatggtattcaa 41479184  T
Q  265 aagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    || ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  41479185 aatcattcaaatttcgaatgattgtttaataaatcagattttgtgggatttt 41479236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 5576937 - 5576679
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||| ||||||||||| |||||||||||| |||||| |||||||| | |||||||||||||| |||||||||||| ||||||             
T  5576937 gggtgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 5576838  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt-nnnnnnngtctagctagtggtatt 261  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||        ||    | |||||||||    
T  5576837 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagt----caagtggtatt 5576742  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||| ||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||    
T  5576741 caaaatcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggatt 5576679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 66 - 320
Target Start/End: Original strand, 43959549 - 43959800
Alignment:
Q  66 gtgtattggatcatgattctaagagattttaaaagactttttt-atcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn- 163  Q
    ||||||| |||||||||| |||  ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||||              
T  43959549 gtgtatttgatcatgattttaaaggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 43959648  T
Q  164 ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattca 263  Q
    |||| |||||||||||||||||||||||||||       ||| |||| ||||||||||||| ||||||||||||       | ||||    |||||||||    
T  43959649 ttgtgttattcaatcaagattctttgtcattttaaaaaagtcttgtg-tattcaatcaagattcttaatcacttcaaaaaagactag----tggtattca 43959743  T
Q  264 aaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    ||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  43959744 aaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgg 43959800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 60 - 324
Target Start/End: Original strand, 42937246 - 42937498
Alignment:
Q  60 aggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnn 159  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||| ||||     |||  ||            
T  42937246 aggagggtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaccaaatttaaaa------aa 42937339  T
Q  160 nnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggta 259  Q
        |||| |||||||||||||||| ||||||||||       ||| ||||||||||||||  |||||||||||||||       ||||||    |||||    
T  42937340 agtcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctag----tggta 42937433  T
Q  260 ttcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42937434 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 42937498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 164 - 324
Target Start/End: Complemental strand, 24502028 - 24501872
Alignment:
Q  164 ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattca 263  Q
    |||| |||||||||||||||||||| ||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||    
T  24502028 ttgtgttattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattca 24501933  T
Q  264 aaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24501932 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 24501872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 58 - 324
Target Start/End: Complemental strand, 14782457 - 14782194
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnn 157  Q
    ||||| || |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||       
T  14782457 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 14782358  T
Q  158 nnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtg 256  Q
           ||||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |    ||    
T  14782357 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg----tg 14782262  T
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  14782261 gtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggatt 14782194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 58 - 324
Target Start/End: Complemental strand, 44726132 - 44725869
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnn 157  Q
    ||||| || |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||       
T  44726132 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 44726033  T
Q  158 nnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtg 256  Q
           ||||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |    ||    
T  44726032 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg----tg 44725937  T
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  44725936 gtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggatt 44725869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 24214907 - 24214817
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  24214907 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaattt 24214817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 324
Target Start/End: Complemental strand, 39467778 - 39467527
Alignment:
Q  69 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnnttgta 168  Q
    |||||||| | ||||||| |||||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||| ||         ||||     
T  39467778 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaagtcttgtg 39467679  T
Q  169 ttattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagc 268  Q
     ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |    |||||||||||| |    
T  39467678 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg----tggtattcaaaatc 39467583  T
Q  269 attcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||| |||||||||||||||||||   ||||||||||||||| |||||||    
T  39467582 attcaaatttcgaaggattgtttaataaattgaattttgatggattttatgggatt 39467527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 169 - 324
Target Start/End: Complemental strand, 10392447 - 10392296
Alignment:
Q  169 ttattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagc 268  Q
    |||||||||||||||||||||||||||        || |||| ||||||||||||||| ||||||||||       ||||||    ||||||||| || |    
T  10392447 ttattcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctag----tggtattcagaatc 10392352  T
Q  269 attcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10392351 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 10392296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 324
Target Start/End: Complemental strand, 18959040 - 18958786
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||||||| |||||| ||||||| |||||||| ||| ||||||          ||    
T  18959040 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtagtattcaatcaagactttttgcaatttaaaaaaagtctt 18958941  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||| ||||||       ||| || ||||||||||||||||| || |||| ||       |||| |    |||||||||||    
T  18958940 gtggtattcaatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg----tggtattcaaa 18958845  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| |||||||||||||||||||  |||||| |||||||||||||||||    
T  18958844 atcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggatt 18958786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 26373694 - 26373778
Alignment:
Q  64 gggtgtattgg-atcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  26373694 gggtgtattgggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 26373778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 58 - 147
Target Start/End: Complemental strand, 24502093 - 24502004
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||| |||||| |||||| |||||    
T  24502093 ttaggggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtgttattcaatcaagattcttt 24502004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 318
Target Start/End: Original strand, 7466228 - 7466476
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnnnnnnntt 165  Q
    |||||||||| | ||||||| |||||||||||||| ||||| || |||||||| |||||||||||||| |||||||| ||| ||| ||          ||    
T  7466228 tgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 7466327  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || ||| |||       ||    || ||||||||||||    
T  7466328 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagt----cttgtggtattcaaa 7466423  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    | |||||||||||||||| ||||||||||||||  |||||||  |||||||||    
T  7466424 atcattcaaattttgaagaattgtttaataaattggattttgtgggattttgt 7466476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 43166819 - 43166749
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  43166819 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 43166749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 324
Target Start/End: Complemental strand, 19718194 - 19717940
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | ||||||| | ||||||||||||| |||| || |||||||| || || |||||||| |||||||| ||| ||||||          ||    
T  19718194 tgtattggattaggattctatgggattttaaaagaccttttaattatgaaaaagtcctgcggtattcaatcaagactttttgcaatttaaaaaaagtctt 19718095  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |    |||||||||||    
T  19718094 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg----tggtattcaaa 19717999  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| |||| ||||||||||||||  |||||| |||||||||||||||||    
T  19717998 atcattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggatt 19717940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 4403184 - 4403254
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  | ||||||||||||||||||||||    
T  4403184 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggatt 4403254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 324
Target Start/End: Complemental strand, 9288763 - 9288516
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnntt 165  Q
    |||||||||| ||||||||| |||||||||||||||||||| || |||||||| ||||||||       |||||||| ||| ||||||          ||    
T  9288763 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtgg-------tcaagactttttgcaatttaaaaaaagtctt 9288671  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||| | | || |||||||       ||    || ||||||||||||    
T  9288670 gtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagt----cttgtggtattcaaa 9288575  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| |||||||||||||||||||  |||||||||| |||||||||||||    
T  9288574 atcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggatt 9288516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 318
Target Start/End: Original strand, 16362089 - 16362337
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||| ||| | ||||||| | |||||||||||||||||| || |||||||| | |||||||||||| |||||||| |||  || ||          ||    
T  16362089 tgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgtaacttaaaaaaaatctt 16362188  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || || ||||       |||| |    |||||||||||    
T  16362189 gtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcg----tggtattcaaa 16362284  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    | ||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  16362285 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 16362337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 26856144 - 26856214
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||||    
T  26856144 gtggtattcaaaatcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggatt 26856214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 32497376 - 32497452
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | ||||||| | |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  32497376 tgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagact 32497452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 307
Target Start/End: Complemental strand, 4031571 - 4031334
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnntt 165  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||  |||||||| ||| ||||||          ||    
T  4031571 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagactttttgcaatttaaaaaaagtctt 4031472  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || || | ||       ||    || ||||||||||||    
T  4031471 gtggtattcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagt----cttgtggtattcaaa 4031376  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    | ||||||||||| |||||||||||||||||||  |||||||    
T  4031375 atcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 10295510 - 10295439
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatgga-ttttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||| ||||||||||||    
T  10295510 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggatt 10295439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 154
Target Start/End: Original strand, 8543409 - 8543503
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaaga-cttttttatcatgaaaaaatcttgtggtattcattcaag---actcttttcaattt 154  Q
    ||||||||| ||||||||||||||| ||||||||||||  ||||||||||| ||||| | |||||||||||| |||||   ||||||||||||||    
T  8543409 gggtgtattagatcatgattctaagggattttaaaagattttttttatcataaaaaagttttgtggtattcaatcaagatcactcttttcaattt 8543503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 37857196 - 37857260
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  37857196 gtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatggattttgt 37857260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 318
Target Start/End: Complemental strand, 42306098 - 42305850
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnntt 165  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||| ||||||| |||||| |||||| | ||| ||||||          ||    
T  42306098 tgtattggattaggattctatgtgattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaagaatttttgcaatttaaaaaaagtctt 42305999  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||           | || ||||||||||||    
T  42305998 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaa----atcttgtggtattcaaa 42305903  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    |  |||||||||| ||||||||||||||| |||  |||||| |||||||||||    
T  42305902 ataattcaaatttcgaaggattgtttaatcaattggattttaatggattttgt 42305850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 8410526 - 8410457
Alignment:
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||| |||| |||||| ||||||||||||| |||||  || |||||||||||||||||||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggatt 8410457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 10295694 - 10295610
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa 151  Q
    |||||||||| | ||||||| | |||||||||||| ||||| || |||||||| |||||||||||||| |||||||| ||| |||    
T  10295694 tgtattggattaggattctatgggattttaaaagagtttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 10295610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 39190084 - 39189997
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||||| | ||||||||| |||||||||||||||||| || |||||    | |||||||||||| |||||||||||| ||||||    
T  39190084 tgtattggattaggattctaagggattttaaaagactttttaattatgaattttttttgtggtattcaatcaagactctttgcaattt 39189997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 307
Target Start/End: Original strand, 31623692 - 31623825
Alignment:
Q  170 tattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagca 269  Q
    ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    |||||||||||| ||    
T  31623692 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttg----tggtattcaaaatca 31623787  T
Q  270 ttcaaattttgaaggattgtttaataaatcagattttg 307  Q
    ||||||||| |||||||||||||||||||  |||||||    
T  31623788 ttcaaatttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 4403000 - 4403072
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaa 139  Q
    |||||||||| |||||| || |||||||||||||||||||| ||  ||||||| |||| ||||||||| ||||    
T  4403000 tgtattggattatgattatatgagattttaaaagactttttaattgtgaaaaagtcttttggtattcaatcaa 4403072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 18306090 - 18306026
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  |||||||  |||||||||    
T  18306090 gtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgtgggattttgt 18306026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 32497602 - 32497666
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  |||||||  |||||||||    
T  32497602 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggattttgt 32497666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 13478376 - 13478309
Alignment:
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||| | || |||||| ||||||||||||||||||| |||||| | |||||||||| |||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggatt 13478309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 43166961 - 43166874
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||||| | |||| || | |||||||||| ||||||| || | |||||| |||||||||||||| |||||||| ||| ||||||    
T  43166961 tgtattggattaagattttatgggattttaaaatactttttaattaagaaaaagtcttgtggtattcaatcaagactttttgcaattt 43166874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 26855961 - 26856035
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | ||||||| |||||||||||||||  ||| || |||||||| | |||||||||||| ||||||||    
T  26855961 tgtattggattaggattctatgagattttaaaagac--tttaattatgaaaaagttttgtggtattcaatcaagact 26856035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 4950143 - 4950079
Alignment:
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    ||||||||||| ||||||| |||  || |||| |||||||||| ||||||||||||| |||||||    
T  4950143 ggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtgg 4950079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 31623588 - 31623664
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | ||||||| |  ||||||||||| ||||| || |||||||| |||||||| ||||| ||||||||    
T  31623588 tgtattggattaggattctatggaattttaaaagattttttaattatgaaaaagtcttgtggcattcaatcaagact 31623664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 39189940 - 39189881
Alignment:
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttg 317  Q
    |||||||| | ||||||||||| |||||||||||||||||||  || ||||||||||||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaat-tgaatttgatggattttg 39189881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 43308592 - 43308520
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaa 139  Q
    |||||||||| | ||||||| |  ||||||||||||||||| || |||||||| |||| ||||||||| ||||    
T  43308592 tgtattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcttctggtattcaatcaa 43308520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 4950289 - 4950246
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttt 107  Q
    ||||||||||||| | |||||||||||||||||| |||||||||    
T  4950289 gggtgtattggattaagattctaagagattttaatagacttttt 4950246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 17790436 - 17790515
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||||||   ||||  |||||||||||||||||||||| || || | ||||| |||||||||||| ||| ||||    
T  17790436 gggtgtattggattgagatttcaagagattttaaaagactttttgatgataataaaattttgtggtattcaatcatgact 17790515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 2473149 - 2473206
Alignment:
Q  63 agggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaa 120  Q
    |||||||||| ||| | |||||||||||||||||||||| | |||||| || ||||||    
T  2473149 agggtgtattagattaggattctaagagattttaaaagattattttattattaaaaaa 2473206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 29260371 - 29260283
Alignment:
Q  52 caaaatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaaga 141  Q
    ||||||||||| |||||||||||||   |||| |||  ||||||||||||||||||| |  |  |||| |||||||||||||| ||||||    
T  29260371 caaaatttagg-gggtgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 29260283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 18306250 - 18306190
Alignment:
Q  91 attttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa 151  Q
    |||||| |||| ||||| || |||||||| |||||||||||||| |||||||| ||| |||    
T  18306250 attttagaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 18306190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 107
Target Start/End: Complemental strand, 32498903 - 32498875
Alignment:
Q  79 tgattctaagagattttaaaagacttttt 107  Q
    |||||||||||||||||||||||||||||    
T  32498903 tgattctaagagattttaaaagacttttt 32498875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 6e-68; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 57 - 324
Target Start/End: Complemental strand, 6197801 - 6197537
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-n 155  Q
    |||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||| |||||||||||| ||||||      
T  6197801 tttaggggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaa 6197702  T
Q  156 nnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagt 255  Q
            |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    |||||    
T  6197701 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagt 6197606  T
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6197605 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 6197537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 58 - 324
Target Start/End: Original strand, 1391507 - 1391770
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nn 156  Q
    ||||| ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||       
T  1391507 ttaggtgggtgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 1391606  T
Q  157 nnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtg 256  Q
           |||| ||||||||||||||||| |||||||||       ||| |||||||||||||||||||||||||||||||       ||    ||||||    
T  1391607 aaaagtcttgtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtg 1391702  T
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1391703 gtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggatt 1391770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 2301054 - 2300797
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||             
T  2301054 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt 2300955  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| ||||||||||||||||||||||| |||||||       ||    ||| |||||||     
T  2300954 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagt----ctactggtattg 2300859  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  2300858 aaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggatt 2300797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 64 - 316
Target Start/End: Original strand, 29111459 - 29111711
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagac-ttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnn 161  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| |||||||||||| ||||||            
T  29111459 gggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaataaag 29111558  T
Q  162 nnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtatt 261  Q
      |||| |||||||||||||||||||||||||||       ||| |||||||||||||| ||| ||||||||||||          |  ||||| |||||    
T  29111559 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagt--ctagtagtatt 29111656  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29111657 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 29111711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 64 - 316
Target Start/End: Original strand, 29076486 - 29076737
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagac-ttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnn 161  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| |||||||||||| ||||||            
T  29076486 gggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaataaag 29076585  T
Q  162 nnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt-nnnnnnngtctagctagtggtat 260  Q
      |||| |||||||||||||||||||||||||||       ||| |||||||||||||| ||| ||||||||||||        ||    ||||| ||||    
T  29076586 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagt----ctagtagtat 29076681  T
Q  261 tcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29076682 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 29076737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 91 - 319
Target Start/End: Original strand, 28002581 - 28002806
Alignment:
Q  91 attttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgtattattcaatcaagattctttg 189  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| ||||||          |||| |||||||||||||||| ||||    
T  28002581 attttaaaagacttttttataatgaaaaaatcttgtcgtattcaatcaagactctttccaatttaaaaaaagtcttgtcttattcaatcaagattttttg 28002680  T
Q  190 tcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgt 289  Q
    ||||||       ||| | |||||||||||||||||||||||||||||       ||||||    || ||||||||| ||||||||||| ||||||||||    
T  28002681 tcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctag----tgatattcaaaatcattcaaatttggaaggattgt 28002776  T
Q  290 ttaataaatcagattttgatggattttgtg 319  Q
    ||||||||||||||||||||||||||||||    
T  28002777 ttaataaatcagattttgatggattttgtg 28002806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 7051750 - 7051991
Alignment:
Q  80 gattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnnnnnnnttgtattattcaatc 178  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||| ||          ||||  ||| | |||    
T  7051750 gattctaagagattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttgcaacttaaaaaaagtcttgtggtatacgatc 7051849  T
Q  179 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattt 278  Q
    |||||||||||||||||       ||| |||||||| |||||||||||||| |||||||       ||    |  ||| ||||||||| |||||||||||    
T  7051850 aagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagt----cgtgtgatattcaaaatcattcaaattt 7051945  T
Q  279 tgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
     |||||||||||||||||||  |||||||||||||||||| |||||    
T  7051946 cgaaggattgtttaataaattggattttgatggattttgtaggatt 7051991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 58 - 324
Target Start/End: Original strand, 31895579 - 31895842
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnn 157  Q
    ||||| || |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||       
T  31895579 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 31895678  T
Q  158 nnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtg 256  Q
           ||||  ||||||||||||| ||||||||||||       ||| ||  |||||||||||||||| || |||| ||       |||| |    ||    
T  31895679 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttg----tg 31895774  T
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  31895775 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 31895842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 34773301 - 34773555
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | |||| || | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||          ||    
T  34773301 tgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 34773400  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||        ||| |    |||||||||||    
T  34773401 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttg----tggtattcaaa 34773496  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  34773497 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 34773555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 324
Target Start/End: Complemental strand, 14262746 - 14262492
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | ||||||| | |||||||||||||||||| || ||||||||||||||||||||||| |||||| | ||| ||| ||          ||    
T  14262746 tgtattggattaggattctacgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaaaagtctt 14262647  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||| | || |||| ||       |||| |    |||||||||||    
T  14262646 gtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttg----tggtattcaaa 14262551  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | |||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  14262550 atcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 14262492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 34759179 - 34759109
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||    
T  34759179 gtggtattcaaaatcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggatt 34759109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 237
Target Start/End: Original strand, 656879 - 657028
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaa-tcttgtggtattcattcaagactcttttcaattt--nnnnnnnnnttgtattattcaatcaagattct 186  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||| ||||||||||||||            ||| ||||||||||||||||||    
T  656879 gattttaaaagacttttttatcataaaaaaaatcttatggtattcaatcaatactcttttcaatttaaaaaaaaaaaatgtgttattcaatcaagattct 656978  T
Q  187 ttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 237  Q
    ||| |||||       ||| |||||||||||||||||||||||||||||||    
T  656979 ttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt 657028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 254 - 320
Target Start/End: Original strand, 7497152 - 7497218
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||  ||||||||||||||||||||    
T  7497152 gtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggattttgatggattttgtgg 7497218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 30385186 - 30385122
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||  |||||||||    
T  30385186 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgggattttgt 30385122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 31067569 - 31067633
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||  |||||||||    
T  31067569 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgggattttgt 31067633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 708941 - 708990
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaa 139  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||    
T  708941 gattttaaaagacttttttataatgaaaaaatctagtggtattcaatcaa 708990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 4200541 - 4200492
Alignment:
Q  269 attcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgt 4200492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 31609750 - 31609697
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||||||||||| || || |||||||||||||||||||| ||||||||    
T  31609750 gattttaaaagactttttaattataaaaaaatcttgtggtattcaatcaagact 31609697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 34759327 - 34759242
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttt-tatcatgaaaaaa-tcttgtggtattcattcaagactcttt 147  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||  | | | |||||| |||||||||||||| ||||||||||||    
T  34759327 gggtgtattggattaggattctatgagattttaaaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactcttt 34759242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 5957152 - 5957205
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||| || ||||| ||| |||||||||| ||||||||    
T  5957152 gattttaaaagacttttttataataaaaaagtctagtggtattcaatcaagact 5957205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 7100190 - 7100243
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||  |||||||| ||| |||||||||| ||||||||    
T  7100190 gattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagact 7100243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 8794440 - 8794387
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||  |||||||| ||| |||||||||| ||||||||    
T  8794440 gattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagact 8794387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 3848286 - 3848330
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaat 298  Q
    ||||||||||||| |||| |||||||||| |||||||||||||||    
T  3848286 gtggtattcaaaatcatttaaattttgaatgattgtttaataaat 3848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 7497010 - 7497086
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| |  |||||| |||||||||||||| ||||| || |||||||| | || ||||||||| ||||||||    
T  7497010 tgtattggattagaattctatgagattttaaaagattttttaattatgaaaaagtattctggtattcaatcaagact 7497086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 21910839 - 21910797
Alignment:
Q  19 agaattgggagaaattttaattttgagcgttttcaaaatttag 61  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||    
T  21910839 agaatcgggagaaattttaattttgagtgttttaaaaatttag 21910797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 6e-68; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 996402 - 996146
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||              
T  996402 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattaaaaaaagtc 996303  T
Q  164 ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattca 263  Q
    |||| |||||||||||||||||||| ||||||       ||| |||||||||||||||||| ||||||||||||       ||    |||||||||||||    
T  996302 ttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagt----ctagtggtattca 996207  T
Q  264 aaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  996206 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 996146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 57 - 324
Target Start/End: Original strand, 20498092 - 20498355
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-n 155  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||      
T  20498092 tttaggggggtgtattggatcatgattctaagggattttaaaagac-tttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaa 20498190  T
Q  156 nnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagt 255  Q
            |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    |||||    
T  20498191 aaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagt 20498286  T
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20498287 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 20498355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 64 - 324
Target Start/End: Original strand, 19253716 - 19253973
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||             
T  19253716 gggtttattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 19253815  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    ||||||||||||    
T  19253816 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattc 19253911  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  19253912 aaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggatt 19253973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 57 - 324
Target Start/End: Complemental strand, 37820801 - 37820537
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-n 155  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||      
T  37820801 tttaggagggtatattggataatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaa 37820702  T
Q  156 nnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagt 255  Q
            |||| |||||||||||||||||||||||||||        || |||||||||||||||||| ||||||||||||       ||    |||||    
T  37820701 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagt----ctagt 37820606  T
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37820605 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 37820537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 10139463 - 10139206
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||             
T  10139463 gggtgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 10139364  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| ||||||||||||||||| || ||||||       ||| |||||||||||||||||||||||||||||||       ||    ||||||||||||    
T  10139363 cttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattc 10139268  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10139267 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 10139206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 75 - 324
Target Start/End: Original strand, 35337635 - 35337881
Alignment:
Q  75 atcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgtattatt 173  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| ||||||          |||| |||||    
T  35337635 atcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttatt 35337734  T
Q  174 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 273  Q
    |||||||||||| |||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    ||||||||||||  |||||    
T  35337735 caatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaaaaattca 35337830  T
Q  274 aattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35337831 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 35337881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 51699796 - 51699540
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||||||||||             
T  51699796 gggtgtattggatcatgattataaaagattttaaaagatttttttatcaagaaaaaattttgtggtattcaatcaagactcttttcaatttaaaaaaagt 51699697  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     ||||||||||||||||||||||||||||||||        || |||||||||||||||||||||||||||||||           | ||||||||||||    
T  51699696 cttgtattattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaa-----atctagtggtattc 51699602  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| ||||||||||| ||||||||| ||||||||| ||||||||||| |||||||||||||    
T  51699601 aaaatcattcaaatttcgaaggattggttaataaataagattttgatgaattttgtgggatt 51699540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 3206513 - 3206265
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||             
T  3206513 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt 3206414  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     ||||  |||||||||||||||||||              ||| |||||||||||||||||||||||||||||||       ||    ||||||||||||    
T  3206413 cttgtggtattcaatcaagattcttt---------aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattc 3206327  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3206326 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 3206265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 58 - 324
Target Start/End: Original strand, 40246727 - 40246990
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt-tcaatttnn 156  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||| |||||||||||| |   ||       
T  40246727 ttaggggggtgtattggatcatgattctaagagattttaaaaaacttttttatcgtgaaaaagtcttgtggtattcaatcaagactctttctggtttaaa 40246826  T
Q  157 nnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtg 256  Q
           |||| |||||||||||||||||||||||||||       ||  |||||||||||||||||||| ||||||| ||       ||    ||||||    
T  40246827 aaaaatcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagt----ctagtg 40246922  T
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40246923 gtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggatt 40246990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 67 - 324
Target Start/End: Complemental strand, 1440265 - 1440012
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnnttg 166  Q
    |||||||| |||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||         |||    
T  1440265 tgtattgggtcatgattctaagagattttaaaatacttttt-atcatgaaaaagtcttgtggtattcaatcaagactattttcaatttaaaaaagtcttg 1440167  T
Q  167 tattattcaatcaagattctttgtcattt-nnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    | |||||||||||||||||||||||||||        ||  |||||||||||||||||||||||||||||||       ||    |||||||||||||||    
T  1440166 tgttattcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattcaaa 1440071  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | |||||||||||  |||||||||||||||||||||||||||||||||||| |||||||    
T  1440070 atcattcaaatttccaaggattgtttaataaatcagattttgatggattttatgggatt 1440012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 29449177 - 29448918
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn 163  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| ||| ||             
T  29449177 gggtgtattagatcatgattataagggattttaaaagacttttttattatgaaaaaatcttgtggtattcaatcaatactctttccaaatttaaaaaaaa 29449078  T
Q  164 ---ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtat 260  Q
       |||| ||||||||||||||||| |||||||||       ||| |||| ||||||||||||||||| ||||||||       ||||||    ||||||    
T  29449077 gtcttgtgttattcaatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctag----tggtat 29448982  T
Q  261 tcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29448981 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 29448918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 84 - 324
Target Start/End: Complemental strand, 44762334 - 44762097
Alignment:
Q  84 ctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnnttgtattattcaatcaaga 182  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||          |||| ||||||||||||||    
T  44762334 ctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 44762235  T
Q  183 ttctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaa 282  Q
    |||||||||||||       ||||||| |||||||||||||||||||||||||||       ||    ||||||||||| ||||  |||||| ||| |||    
T  44762234 ttctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtatttaaaattattcaagtttcgaa 44762139  T
Q  283 ggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44762138 ggattgtttaataaatcagattttgatggattttgtgggatt 44762097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 60 - 320
Target Start/End: Original strand, 29029891 - 29030147
Alignment:
Q  60 aggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatt-tnnnn 158  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||| ||  ||||          
T  29029891 aggaggatgtattggatcatgattctaagggattttaaaagacttttatatcatgaaaaaatattgtggtattcaatcaagactcattctaattaagaaa 29029990  T
Q  159 nnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggt 258  Q
         |||| ||||||||| |||| ||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    || |||||    
T  29029991 aagtcttgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaagt----cttgtggt 29030085  T
Q  259 attcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29030086 attcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 29030147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 33808119 - 33807858
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggt---attcattcaagactcttttcaatttnnnnnn 160  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||| ||||| |||||||||   ||||| |||| | ||||||||||||          
T  33808119 gggtgtattgaatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtggtattcaatcaaaattcttttcaatttaaaaaa 33808020  T
Q  161 nnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctag-ctagtggt 258  Q
        |||| ||||||||| |||||||||||||||||       ||| |||||||||||||||||||||||||||||||           || ||||||||    
T  33808019 agtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaa----agtctagtggt 33807924  T
Q  259 attcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33807923 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 33807858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 64 - 324
Target Start/End: Original strand, 25418255 - 25418512
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn 163  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||||||||||  | |||||||||||| |||| ||||||| || |||             
T  25418255 gggtttattggatcatgattctaagagattttaaaaaatttttttatcatgaaaattttttgtggtattcaatcaaaactctttccattttaaaaaaagt 25418354  T
Q  164 -ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||| ||||||||||        ||||||    |||||||    
T  25418355 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagc----ggtattc 25418450  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  25418451 aaaatcattcaaatttgaaaggattgtttaataaatcagattttgatggattttgtgggatt 25418512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 63 - 324
Target Start/End: Original strand, 54625480 - 54625738
Alignment:
Q  63 agggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnn 162  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||   | |||| ||||||| |||||||||||| ||||||            
T  54625480 agggtgtattggatcatgattctaagagattttagaagatttttttatcatgaaatttttttgtagtattcaatcaagactctttccaatttaaaaaaag 54625579  T
Q  163 n-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtatt 261  Q
      |||| |||||||||||| |||| |||||||||        || ||| |||||||||||||||||||||||||||       ||||||    |||||||    
T  54625580 tcttgtgttattcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtatt 54625675  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  54625676 caaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 54625738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 6589455 - 6589710
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagactttttt-atcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-t 164  Q
    |||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||||||| | ||||||||||  |||||          |    
T  6589455 tgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaagtct 6589554  T
Q  165 tgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaa 264  Q
    ||| |||||||||||| |||| |||||||||       ||| |||||||||||||||||||||||||||| ||       ||||||    ||||||||||    
T  6589555 tgtgttattcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctag----tggtattcaa 6589650  T
Q  265 aagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    || ||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||    
T  6589651 aatcattcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggatt 6589710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 164 - 324
Target Start/End: Complemental strand, 3999861 - 3999705
Alignment:
Q  164 ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattca 263  Q
    |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||        |||||    |||||||||    
T  3999861 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctag----tggtattca 3999766  T
Q  264 aaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3999765 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 3999705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 55 - 324
Target Start/End: Complemental strand, 36674456 - 36674190
Alignment:
Q  55 aatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||| || |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||    
T  36674456 aatttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt 36674357  T
Q  155 nnnnnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagcta 253  Q
              ||||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |       
T  36674356 aaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg--- 36674260  T
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
     |||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  36674259 -tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggatt 36674190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 64 - 320
Target Start/End: Original strand, 52114419 - 52114671
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn 163  Q
    ||||||| |||||||||||||||||  ||||||||||| ||||||||||||| ||| |||||||||||||| ||||  || ||||||||||             
T  52114419 gggtgtactggatcatgattctaaggaattttaaaagatttttttatcatgataaagtcttgtggtattcaatcaa--ctattttcaatttaaaaaaaat 52114516  T
Q  164 -ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctag-ctagtggtatt 261  Q
     |||| |||||||| ||||||||||||||||||       ||| |||||||||||||||||||| ||||||||||           || |||||||||||    
T  52114517 cttgtgttattcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaa----agtctagtggtatt 52114612  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    |||||  |||||||||| | |||||||||||||||||||||||||||| ||||||||||    
T  52114613 caaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgg 52114671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 12734166 - 12734070
Alignment:
Q  55 aatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa 151  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  12734166 aatttaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctcttcaa 12734070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 170 - 324
Target Start/End: Complemental strand, 33996751 - 33996601
Alignment:
Q  170 tattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagca 269  Q
    ||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||        || ||    |||||||||||| ||    
T  33996751 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccag----tggtattcaaaatca 33996656  T
Q  270 ttcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  33996655 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgagggatt 33996601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 69 - 324
Target Start/End: Complemental strand, 44906825 - 44906573
Alignment:
Q  69 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgt 167  Q
    |||||||| | ||||||| |||||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||| ||          ||||    
T  44906825 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgt 44906726  T
Q  168 attattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaag 267  Q
      ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    ||||||||||||     
T  44906725 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttg----tggtattcaaaat 44906630  T
Q  268 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||| |||||||||||||||||||  |||||||||| |||||||||||||    
T  44906629 cattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggatt 44906573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 324
Target Start/End: Original strand, 22057652 - 22057908
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagactttttt-atcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnn 162  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| | |||||||||||| ||     ||||| ||||||            
T  22057652 gggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtattgtggtattcaatcgt---tctttccaatttaaaaaaag 22057748  T
Q  163 n-ttgtattattcaatcaagattctttgtcatttnnnnnnngt-catgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtat 260  Q
      |||| |||||||||||||||||||||||||||          | |||||||||| |||||||||||| |||||||        |||||    ||||||    
T  22057749 tcttgtgttattcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctag----tggtat 22057844  T
Q  261 tcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  22057845 ttaaaatcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggatt 22057908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 104 - 324
Target Start/End: Complemental strand, 53929395 - 53929188
Alignment:
Q  104 tttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnng 203  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||                 ||||||||||||||||||||||||       |    
T  53929395 tttttatcatgaaaaaattttgtggtattcaatcaagactcttttcaatttaaaaaaag---------ttcaatcaagattctttgtcatttaaaaaaag 53929305  T
Q  204 tcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagat 303  Q
    || |||||||||||||||||||||||||||||||       ||||||    |||||||||||| |||| |||| | ||| ||||||||||||||| ||||    
T  53929304 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcatttaaatatcgaacgattgtttaataaataagat 53929209  T
Q  304 tttgatggattttgtgggatt 324  Q
    ||||||||||||||| |||||    
T  53929208 tttgatggattttgtaggatt 53929188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 318
Target Start/End: Original strand, 10660417 - 10660675
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-n 155  Q
    |||||| || |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||      
T  10660417 tttagggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaa 10660516  T
Q  156 nnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagt 255  Q
            ||||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       ||     | ||    
T  10660517 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagt----attgt 10660612  T
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  10660613 ggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 11431418 - 11431672
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnntt 165  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||          ||    
T  11431418 tgtattggattaggattctataagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 11431517  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  |||||||| |||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       ||    || ||||||||||||    
T  11431518 gtggtattcaataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagt----cttgtggtattcaaa 11431613  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | |||| |||||| |||||||||||||||||||  ||||||| ||||||||||||||||    
T  11431614 atcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggatt 11431672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 58 - 307
Target Start/End: Complemental strand, 23753709 - 23753463
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nn 156  Q
    ||||| || |||||||||| | |||||||   |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||       
T  23753709 ttagggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 23753610  T
Q  157 nnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtg 256  Q
           ||||  ||||||||||||||||||||||||||       ||| || ||||||||||||||||| || |||| ||       ||    || |||    
T  23753609 aaaagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagt----cttgtg 23753514  T
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    |||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  23753513 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 26107153 - 26107407
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnntt- 165  Q
    |||||||||| | ||||||| |||||||||||||| ||||| || |||||||| ||||||  |||||| |||||||| ||| ||| ||         ||     
T  26107153 tgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtaatattcaatcaagactttttgcaacttaaaaaagtctta 26107252  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  || |||||||||||||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |    |||||||||||    
T  26107253 gtcgtactcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttg----tggtattcaaa 26107348  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| |||||||||||||||||||  ||||||||||||||||||| ||||    
T  26107349 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgatt 26107407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 40897035 - 40897290
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaa-tcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-t 164  Q
    |||||||||| | ||||||| | |||||||||| ||||||| || ||||||||| |||||||||||||| |||||| | ||| ||| ||          |    
T  40897035 tgtattggattaggattctatgggattttaaaacactttttaattatgaaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaaaagtct 40897134  T
Q  165 tgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaa 264  Q
    |||  |||||| |||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       ||||   || ||||||||||    
T  40897135 tgtggtattcattcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtct---ta-tggtattcaa 40897230  T
Q  265 aagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    || ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  40897231 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 40897290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 324
Target Start/End: Complemental strand, 52618175 - 52618025
Alignment:
Q  170 tattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagca 269  Q
    ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    |||||||||||| ||    
T  52618175 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttg----tggtattcaaaatca 52618080  T
Q  270 ttcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  52618079 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 52618025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 18749688 - 18749758
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  18749688 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 18749758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 34484160 - 34484090
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  34484160 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 34484090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 324
Target Start/End: Complemental strand, 51738039 - 51737786
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnnnnnnntt 165  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||||||||||||||||||||||   |||||| ||  ||| ||          ||    
T  51738039 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattca--aaagacttttagcaacttaaaaaaagtctt 51737942  T
Q  166 gtattattcaatcaagattctttgtca-tttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaa 264  Q
    ||  ||||||||||||| ||||| ||| |||       ||| || ||||||||||||||||| || |||||||       ||    || |||||||||||    
T  51737941 gtggtattcaatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagt----cttgtggtattcaa 51737846  T
Q  265 aagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    || ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  51737845 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 51737786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 5825139 - 5825208
Alignment:
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggatt 5825208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 52080000 - 52080065
Alignment:
Q  251 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  52080000 ctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgtgggatttt 52080065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 15494045 - 15493958
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||||| || |||||||| |||||||||||||||||| || ||||||||||||||| ||||| | |||||||||||| ||||||    
T  15494045 tgtattggattataattctaagggattttaaaagactttttaattatgaaaaaatcttgtagtatttaatcaagactctttgcaattt 15493958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 324
Target Start/End: Original strand, 17946284 - 17946434
Alignment:
Q  170 tattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagca 269  Q
    ||||||||||||||||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    || ||||||||| ||    
T  17946284 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcg----tgatattcaaaatca 17946379  T
Q  270 ttcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||  ||||||||||||||||||  ||||||||||||||||||||||||    
T  17946380 ttcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggatt 17946434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 32580252 - 32580322
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||| ||||||    
T  32580252 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggatt 32580322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 48379233 - 48379303
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||   |||||||||||||||||||||||    
T  48379233 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggatt 48379303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 50903370 - 50903300
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||    
T  50903370 gtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggatt 50903300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 52810454 - 52810524
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||   |||||||||||||||||||||||    
T  52810454 gtggtattcaaaatcattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggatt 52810524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 54628920 - 54628990
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||    
T  54628920 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggatt 54628990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 90 - 324
Target Start/End: Complemental strand, 6035343 - 6035113
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnnttgtattattcaatcaagattctttg 189  Q
    |||||||||||||||||| || ||||||||||||||||||||||| |||||  | ||| ||| ||         |  |  ||||||||||||| ||||||    
T  6035343 gattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagtttttttgcaacttaaataaagttcatggtattcaatcaagagtctttg 6035244  T
Q  190 tcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgt 289  Q
    ||||||       ||| || ||||||||||||||| | || |||||||       |||| |    || ||||||||| ||||||||||| |||| | |||    
T  6035243 tcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcg----tgatattcaaaatcattcaaatttcgaagcaatgt 6035148  T
Q  290 ttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||| |||||||||||||||||||||||||    
T  6035147 ttaataaattagattttgatggattttgtgggatt 6035113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 16010745 - 16010805
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaa 117  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  16010745 tttaggggggtgtattggatcataattctaagggattttaaaagacttttttatcatgaaa 16010805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 27240557 - 27240481
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||||||| |||||||||||||| ||||||||    
T  27240557 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 27240481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 33996808 - 33996753
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaa 119  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  33996808 gggtgtattggatcatgattctaagggattttgaaagacttttttatcatgaaaaa 33996753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 20833068 - 20833138
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||  ||||||||||||||||||| ||||    
T  20833068 gtggtattcaaaatcattcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatt 20833138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 254 - 316
Target Start/End: Original strand, 27899420 - 27899482
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  27899420 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgtaggatttt 27899482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 31646414 - 31646344
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| ||| ||||||||||| |||  ||||||||||||||||||||||||    
T  31646414 gtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggatt 31646344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 318
Target Start/End: Complemental strand, 10728851 - 10728707
Alignment:
Q  170 tattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagca 269  Q
    ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    ||||||| |||| ||    
T  10728851 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttg----tggtatttaaaatca 10728756  T
Q  270 ttcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  10728755 ttcaaatttggaaggattgtttaataaattggattttgatggattttgt 10728707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 147
Target Start/End: Original strand, 38772264 - 38772349
Alignment:
Q  62 gagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||||||||| ||| | |||||| |||||||||||||||||||||  | |||||||| |||||||||||||| |||||| |||||    
T  38772264 gagggtgtattagattaggattctgagagattttaaaagactttttatttatgaaaaagtcttgtggtattcaatcaagattcttt 38772349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 154
Target Start/End: Original strand, 52079882 - 52079965
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    ||||||||||||||||||||||||| ||||||||||   |||||    ||||||||||||||||||||||| ||| || ||||||||||||    
T  52079882 gggtgtattggatcatgattctaagtgattttaaaa---ttttt----atgaaaaaatcttgtggtattcaatcatgattcttttcaattt 52079965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 10105072 - 10105019
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||| || |||||||||||||||||||| ||||||||    
T  10105072 gattttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagact 10105019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 318
Target Start/End: Original strand, 39038036 - 39038180
Alignment:
Q  170 tattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagca 269  Q
    ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    |||||| ||||| ||    
T  39038036 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttg----tggtatccaaaatca 39038131  T
Q  270 ttcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||| |||| ||||||||||||||  ||||||||||||||||||    
T  39038132 ttcaaatttcgaagaattgtttaataaattggattttgatggattttgt 39038180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 539695 - 539615
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    |||||||||| | | |||||||||||||||||||| ||||| || ||||||||  ||||||||||||| |||| |||||||    
T  539695 tgtattggattagggttctaagagattttaaaagattttttaattatgaaaaagccttgtggtattcaatcaaaactcttt 539615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 10728889 - 10728833
Alignment:
Q  91 attttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||||||||||||||| || |||||||| |||||||||||||| ||||||||||||    
T  10728889 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactcttt 10728833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 31646598 - 31646522
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||| || | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| ||||||||    
T  31646598 tgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 31646522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 39842610 - 39842550
Alignment:
Q  258 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||| ||||||||||| |||| |||||||||||||| ||||||||| |||||||||    
T  39842610 tattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgt 39842550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 39842743 - 39842667
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||| | |||||||||||| ||||||||    
T  39842743 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagact 39842667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 52810312 - 52810392
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    |||||||||| | ||||||| | |||||||||||||||||| |  |||||||| | |||||||||||| ||||||||||||    
T  52810312 tgtattggattaggattctatgggattttaaaagactttttaactatgaaaaagtgttgtggtattcaatcaagactcttt 52810392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 1440005 - 1439954
Alignment:
Q  273 aaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggatt 1439954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 18749460 - 18749538
Alignment:
Q  65 ggtgtattggatcatgattcta-agagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||||| | ||||||| ||| ||||||||||||||||| || |||||||| |||||||||||||| ||||||||    
T  18749460 ggtgtattggattaggattctataga-attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 18749538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 54628748 - 54628811
Alignment:
Q  80 gattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||| |||||||||||||||||||| || |||||||  |||||||||||||| ||||||||    
T  54628748 gattctatgagattttaaaagactttttaattatgaaaacgtcttgtggtattcaatcaagact 54628811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 539534 - 539476
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatgga 312  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||  ||||||||||||    
T  539534 gtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 2024117 - 2024175
Alignment:
Q  85 taagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||| | |||||||| |||||||| |||||||||||||| ||||||||    
T  2024117 taagagattttaaaatatttttttattatgaaaaagtcttgtggtattcaatcaagact 2024175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 20832887 - 20832961
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaaga 141  Q
    |||||||||| | ||||||| |||||||||||||| ||||| || |||||||| | |||||||||||| ||||||    
T  20832887 tgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaaga 20832961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 45215491 - 45215410
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaa 139  Q
    |||||||||||||||  || | ||||  ||| |||||||||||||||||| || || |||||||||||||||||||| ||||    
T  45215491 ttaggagggtgtattaaattaagatttgaagggattttaaaagactttttaataataaaaaaatcttgtggtattcaatcaa 45215410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 151
Target Start/End: Complemental strand, 50903570 - 50903473
Alignment:
Q  54 aaatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa 151  Q
    ||||| ||| || ||||||| || ||||||||| | |||||||||| ||||||| |  |||||||| |||||||||||||| |||||||| ||| |||    
T  50903570 aaattaagggggatgtattgaattatgattctatgggattttaaaatactttttaagtatgaaaaagtcttgtggtattcaatcaagactttttgcaa 50903473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 50762180 - 50762116
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| ||||| ||||| ||| |||||||| ||||||  ||||||||||||||||||    
T  50762180 gtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatggattttgt 50762116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 50762364 - 50762288
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | |||| || | |||||||||||||||||| || |||||||| | |||||||||||| ||||||||    
T  50762364 tgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtattgtggtattcaatcaagact 50762288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 141
Target Start/End: Complemental strand, 52618288 - 52618205
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaaga 141  Q
    ||||| || |||||| ||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||  ||||||    
T  52618288 ttagggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaaga 52618205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 55235076 - 55235159
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||||| ||||| | |||||||||  ||||||||||||||||| || |||||||||| | ||| |||||| ||||||| ||||    
T  55235076 gggtgtagtggattaagattctaaggaattttaaaagactttttaattatgaaaaaatatagtgttattcaatcaagacccttt 55235159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 55235264 - 55235331
Alignment:
Q  258 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatgga-ttttgtgggatt 324  Q
    ||||||||| ||||||||||| ||| |||||||||||||||  | |||||||||| ||||||||||||    
T  55235264 tattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggatt 55235331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 17946248 - 17946302
Alignment:
Q  93 tttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||||||||||||| || |||||||| |||||||||||||| |||||| |||||    
T  17946248 tttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattcttt 17946302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 10216219 - 10216166
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||||| |||||||| || ||||| |||||||||||||| ||||||||    
T  10216219 gattttaaaagatttttttattataaaaaagtcttgtggtattcaatcaagact 10216166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 10225848 - 10225795
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||| || ||||| ||||||| |||||| ||||||||    
T  10225848 gattttaaaagacttttttattataaaaaagtcttgtgctattcaatcaagact 10225795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 28146317 - 28146264
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||| |||||||| || || |||||||| ||||||||    
T  28146317 gattttaaaagacttttttatgatgaaaaagtcatggggtattcaatcaagact 28146264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 27899277 - 27899345
Alignment:
Q  66 gtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattca 134  Q
    ||||||| ||| ||||||||||  ||||||||||||||||||||| ||||||   | ||||||||||||    
T  27899277 gtgtattagattatgattctaaatgattttaaaagacttttttattatgaaatttttttgtggtattca 27899345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 37454937 - 37454981
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaat 298  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||    
T  37454937 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaat 37454981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 48379050 - 48379122
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaa 139  Q
    |||||||||| |||||||||   |||||||||||||||||| || || ||||| ||| |||||||||| ||||    
T  48379050 tgtattggattatgattctataggattttaaaagactttttaattatcaaaaagtctcgtggtattcaatcaa 48379122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 23535941 - 23535890
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattt 305  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||| ||||||    
T  23535941 gtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 38682452 - 38682503
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaaga 141  Q
    ||||||||||||||||||| |  | |||||||||||||||||||| ||||||    
T  38682452 gattttaaaagacttttttgttttaaaaaaatcttgtggtattcaatcaaga 38682503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 6131486 - 6131440
Alignment:
Q  107 ttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatt 153  Q
    ||||||||||||| | |||||||||||| |||||||||||| |||||    
T  6131486 ttatcatgaaaaagttttgtggtattcaatcaagactctttccaatt 6131440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 12103544 - 12103602
Alignment:
Q  89 agattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||||||||||||||||| || |||||| | |||||| ||||||| |||| |||||||    
T  12103544 agattttaaaagactttttaattatgaaatagtcttgttgtattcaatcaatactcttt 12103602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 296 - 324
Target Start/End: Complemental strand, 6131321 - 6131293
Alignment:
Q  296 aatcagattttgatggattttgtgggatt 324  Q
    |||||||||||||||||||||||||||||    
T  6131321 aatcagattttgatggattttgtgggatt 6131293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 10225726 - 10225674
Alignment:
Q  91 attttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||| ||||||| || || ||||| |||||||||||||| ||||||||    
T  10225726 attttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagact 10225674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 56 - 324
Target Start/End: Original strand, 1044691 - 1044953
Alignment:
Q  56 atttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttn 155  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| ||||||     
T  1044691 atttaggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattta 1044790  T
Q  156 nnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagt 255  Q
            |||| ||||||||||||||||| |||||||||       ||| |||||||||||||||||||||||||||||||       ||    |||||    
T  1044791 aaaaagtcttgtgttattcaatcaagattccttgtcattt--aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagt 1044884  T
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1044885 ggtattcaaaaccattcaactttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 1044953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 64 - 324
Target Start/End: Original strand, 25331020 - 25331277
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||             
T  25331020 gggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 25331119  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    |||||| |||||    
T  25331120 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtgatattc 25331215  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  25331216 aaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggatt 25331277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 57 - 320
Target Start/End: Original strand, 28541580 - 28541840
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-n 155  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||      
T  28541580 tttaggagggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaa 28541679  T
Q  156 nnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagt 255  Q
            |||| |||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       ||    |||||    
T  28541680 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagt 28541775  T
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  28541776 ggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgg 28541840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 73 - 324
Target Start/End: Complemental strand, 32951144 - 32950896
Alignment:
Q  73 ggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnnttgtatta 171  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||          |||| |||    
T  32951144 ggatcatgattctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgtta 32951045  T
Q  172 ttcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcatt 271  Q
    ||||||||||||| ||||||||||       |||||||||||||||||||||||||||||||||||       ||    |||||||||||||||| ||||    
T  32951044 ttcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagtggtattcaaaatcatt 32950949  T
Q  272 caaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  32950948 caaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggatt 32950896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 57 - 324
Target Start/End: Original strand, 55302725 - 55302989
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-n 155  Q
    ||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||| |||||||| | || ||||||||| |||||||||||||||||||      
T  55302725 tttaggagggtgtattgaatcatgattttaagggattttagaagacttttttataatgaaaaagtgttatggtattcaatcaagactcttttcaatttaa 55302824  T
Q  156 nnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagt 255  Q
            |||| || ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       ||    |||||    
T  55302825 aaaaagtcttgtgtttttcaatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagt----ctagt 55302920  T
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  55302921 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatattgtgggatt 55302989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 41881401 - 41881142
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagactttttt-atcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnn 162  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||||            
T  41881401 gggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaag 41881302  T
Q  163 n-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtatt 261  Q
      |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||          |   ||||||||||    
T  41881301 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtt---tagtggtatt 41881205  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41881204 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 41881142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 60 - 324
Target Start/End: Original strand, 7007258 - 7007520
Alignment:
Q  60 aggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnn 159  Q
    ||||||||| |||| ||||||||| |||| |||||||| |||||||||||| |||||||| | |||||||||||| |||||||||||||||||||         
T  7007258 aggagggtggattgaatcatgattttaagggattttaatagacttttttataatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaa 7007357  T
Q  160 nnnnt--tgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtgg 257  Q
        |  ||| |||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||       ||||||    |||    
T  7007358 aaagtcttgtgttattcaatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tgg 7007453  T
Q  258 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  7007454 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggatt 7007520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 55 - 324
Target Start/End: Original strand, 22201896 - 22202161
Alignment:
Q  55 aatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||    
T  22201896 aatttagg-gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaattt 22201994  T
Q  155 -nnnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagcta 253  Q
              |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    |||    
T  22201995 aaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----cta 22202090  T
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| |||| ||||||  || ||||||||||||||| | |||||||||||||||||||||||    
T  22202091 gtggtattcaaaatcattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggatt 22202161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 39479674 - 39479415
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||             
T  39479674 gggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt 39479575  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctag-ctagtggtatt 261  Q
     |||| ||||||||||||||||| |||||||||       ||| |||||||||||||||||||||||||||||||           || || ||||||||    
T  39479574 cttgtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaa---aagacttgtggtatt 39479478  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  39479477 caaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggatt 39479415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 65 - 324
Target Start/End: Original strand, 1112784 - 1113039
Alignment:
Q  65 ggtgtattggatcatgattctaagagattttaaaagactttttt-atcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn 163  Q
    |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| | ||||             
T  1112784 ggtgtattggatcatgattctaaga--ttttaaaagactttttttatcatgaaaaagtcttgtgttattcaatcaagactctttccgatttaaaaaaagt 1112881  T
Q  164 -ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     ||||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    ||||||||    
T  1112882 attgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattc 1112977  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| |||||||||||  || |||||||||||||||||||||||||||||||||||||||||    
T  1112978 aaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggatt 1113039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 53 - 324
Target Start/End: Complemental strand, 24131300 - 24131042
Alignment:
Q  53 aaaatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaat 152  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  24131300 aaaattaaggagggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaat 24131201  T
Q  153 tt-nnnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagc 251  Q
    ||          |||| |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||    |    
T  24131200 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----c 24131105  T
Q  252 tagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||          |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  24131104 tagtggt----------attcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggatt 24131042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 83 - 324
Target Start/End: Complemental strand, 34228880 - 34228643
Alignment:
Q  83 tctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnnttgtattattcaatcaaga 182  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||          ||| ||||||||||||||    
T  34228880 tctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctgtgttattcaatcaaga 34228781  T
Q  183 ttctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaa 282  Q
    |||||||||||||       |||||||||||||||||||| | ||||||||||||       ||    |||||||||||||||| |||| |||||| |||    
T  34228780 ttctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagt----ctagtggtattcaaaatcattgaaatttcgaa 34228685  T
Q  283 ggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
     ||||||||||||||||||||||||||||||||||| |||||    
T  34228684 tgattgtttaataaatcagattttgatggattttgtaggatt 34228643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 65 - 304
Target Start/End: Complemental strand, 46635959 - 46635722
Alignment:
Q  65 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaa-tcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||             
T  46635959 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaat 46635860  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     ||||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||     |||| ||||||    
T  46635859 cttgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagt----ttagtagtattc 46635764  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagatt 304  Q
    |||| ||||||||||| ||||||||||||||||||| |||||    
T  46635763 aaaatcattcaaatttcgaaggattgtttaataaataagatt 46635722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 58 - 324
Target Start/End: Complemental strand, 7250096 - 7249825
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt--n 155  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       
T  7250096 ttagaagggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactcttttcaatttaaa 7249997  T
Q  156 nnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtcta---gct 252  Q
            |||| ||||||||||||||||||| |||||||        || |||||||||| |||||||||||| || ||||           |    ||    
T  7249996 aaaaagtcttgtgttattcaatcaagattcttagtcatttaaaaaatatcttgtggtattcgatcaagactcttgataacttaaaaaaaaaaaaaagtct 7249897  T
Q  253 agtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7249896 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 7249825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 75 - 324
Target Start/End: Complemental strand, 19741213 - 19740968
Alignment:
Q  75 atcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnnttgtattatt 173  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||          |||| |||||    
T  19741213 atcatgattctaaaagattttaaaagacttttt-atcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttatt 19741115  T
Q  174 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 273  Q
    ||||||||||||||||||||||       ||||||||||||||| |||||||| ||||||||||       ||    || |||||||| |||| ||||||    
T  19741114 caatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagt----cttgtggtattaaaaatcattca 19741019  T
Q  274 aattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  19741018 aatttcgaaggattgtttaataaattagattttgatggattttgtgggatt 19740968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 55 - 324
Target Start/End: Complemental strand, 30010002 - 30009737
Alignment:
Q  55 aatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| |||| | ||||||| |||||||||||| ||||||    
T  30010002 aatttagg-gggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttattgtattcaatcaagactctttccaattt 30009904  T
Q  155 -nnnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagcta 253  Q
              |||| ||||| |||||| ||||||| ||||||       ||| |||||||||||||||||||||||||||||||       ||    |||    
T  30009903 aaaaaaagtcttgtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagt----cta 30009808  T
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  30009807 gtggtattcaaaatcatttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggatt 30009737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 64 - 320
Target Start/End: Complemental strand, 37046769 - 37046515
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||||||||||||||||||||||||  |||||||||||  |||||||||| ||||| |||||||||||||| |||||||||||||||||||             
T  37046769 gggtgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt 37046670  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt-nnnnnnngtctagctagtggtatt 261  Q
     |||| |||||||||||||||||||||||||||       ||  |||||||||||||||||||||||||||||||        ||    |||||| ||||    
T  37046669 cttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagt----ctagtgatatt 37046574  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
     |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37046573 taaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 37046515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 324
Target Start/End: Complemental strand, 25504964 - 25504699
Alignment:
Q  55 aatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||| ||||||||||||||||||| | ||||||  |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  25504964 aattaaggagggtgtattggatcagg-ttctaatggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 25504866  T
Q  155 nnnnnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagcta 253  Q
              |||| |||||||||||||||||||  ||||||        || |||| ||||||||||||||||||||||||||       ||| ||       
T  25504865 aaaaaaagtcttgtgttattcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccag--- 25504769  T
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
     || ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25504768 -tgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 25504699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 54 - 324
Target Start/End: Original strand, 23464832 - 23465101
Alignment:
Q  54 aaatttaggagggtgtattggatcatgattctaagagattttaaaagactttttt--atcatgaaaaaatcttgtggtattcattcaagactcttttcaa 151  Q
    ||||||| | || |||||||||| |||||||||||  ||||||||||| ||||||  ||||||||||| |||||||||||||| |||||||||||| |||    
T  23464832 aaatttacggggatgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaa 23464931  T
Q  152 tttnnnnnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctag 250  Q
    | |          |||||||||||||||||||||| |||||||||       ||  |||  ||||||||||||||||||||||||||       ||||||    
T  23464932 tataaaaaaagtcttgtattattcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctag 23465031  T
Q  251 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
        |||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  23465032 ----tggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtgggatt 23465101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 66 - 316
Target Start/End: Complemental strand, 31315043 - 31314800
Alignment:
Q  66 gtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnnt 164  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | |||||||||||| |||||||| ||||||||||          |    
T  31315043 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtct 31314944  T
Q  165 tgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaa 264  Q
    ||| ||||| |||||||||||||||||||||       ||| ||||||||    |||||||||||||||||||       ||    ||||||||||||||    
T  31314943 tgtgttatttaatcaagattctttgtcatttaaaaaaagtcttgtggtat----tcaagactcttaatcacttaaaaaaagt----ctagtggtattcaa 31314852  T
Q  265 aagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    || ||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  31314851 aatcattcaaatttcgaaggattgtttaataaatcagattttgtgggatttt 31314800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 64 - 320
Target Start/End: Complemental strand, 40537462 - 40537214
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||||||||||||||||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||| | ||||||||||  |||||             
T  40537462 gggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaagt 40537363  T
Q  163 nttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||| ||||||||||||       ||| |||||||||||||||| ||||||||||||||                |||||||||    
T  40537362 cttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaat---------gtggtattc 40537272  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    |||| |||| |||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  40537271 aaaatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtgg 40537214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 324
Target Start/End: Original strand, 5441285 - 5441550
Alignment:
Q  56 atttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttn 155  Q
    ||||||| || |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||     
T  5441285 atttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattta 5441384  T
Q  156 nnnnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctag 254  Q
             ||||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |        
T  5441385 aaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg---- 5441480  T
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  5441481 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 5441550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 164 - 324
Target Start/End: Original strand, 25446041 - 25446196
Alignment:
Q  164 ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattca 263  Q
    ||||||||||||||||||||| ||||||||||        || |||||||||||||||||||||||||||||||       ||||||    |||||||||    
T  25446041 ttgtattattcaatcaagatt-tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattca 25446135  T
Q  264 aaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  25446136 aaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggatt 25446196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 57 - 324
Target Start/End: Original strand, 27767938 - 27768202
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnn 156  Q
    |||||| || |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||| | ||| ||||||      
T  27767938 tttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaa 27768037  T
Q  157 nnnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagt 255  Q
            ||||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |    |    
T  27768038 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg----t 27768133  T
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  27768134 ggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 27768202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 12112935 - 12113087
Alignment:
Q  164 ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattca 263  Q
    |||| |||||||||||||||||||||||||||       ||| |||||||||||||||| ||||||||||||||       |||||     |||||||||    
T  12112935 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaa----tggtattca 12113030  T
Q  264 aaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    ||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  12113031 aaatcattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtgg 12113087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 54341036 - 54341290
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||          ||    
T  54341036 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 54341135  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
     |  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |    |||||||||||    
T  54341136 atggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg----tggtattcaaa 54341231  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  54341232 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 54341290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 41320883 - 41320955
Alignment:
Q  251 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggat 323  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41320883 ctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggat 41320955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 319
Target Start/End: Original strand, 51320804 - 51321062
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnn 157  Q
    ||||| || |||||||||| | ||||||| |  ||||||||||||||||| || |||||||||| |||||||||||| |||||||| ||| ||| ||       
T  51320804 ttagggggatgtattggattaggattctacggaattttaaaagactttttaattatgaaaaaattttgtggtattcaatcaagactttttgcaacttaaa 51320903  T
Q  158 nnnnnntt-gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtg 256  Q
          || ||  ||||||||||||| ||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    ||    
T  51320904 aaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttg----tg 51320999  T
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtg 319  Q
    |||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||    
T  51321000 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtg 51321062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 64 - 146
Target Start/End: Original strand, 42786656 - 42786739
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagac-ttttttatcatgaaaaaatcttgtggtattcattcaagactctt 146  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  42786656 gggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 42786739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 66 - 324
Target Start/End: Original strand, 53275727 - 53275985
Alignment:
Q  66 gtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-- 163  Q
    |||||||||||||||||||||||  ||||||||| |  ||||||||||||||||||||||  | ||||| |||||||||||| |||||                
T  53275727 gtgtattggatcatgattctaaggaattttaaaaaatatttttatcatgaaaaaatcttgcaggattcaatcaagactctttccaattaaaaaaaaaaaa 53275826  T
Q  164 --ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtatt 261  Q
      |||| ||||||||| |||||| ||||||||||       ||| ||| |||||||||||||| | ||||||||||       ||||||    || ||||    
T  53275827 tcttgtgttattcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctag----tgatatt 53275922  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
     |||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  53275923 taaaatcattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagatt 53275985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 324
Target Start/End: Complemental strand, 37828695 - 37828462
Alignment:
Q  88 gagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgtattattcaatcaagattct 186  Q
    |||||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||| ||          ||||  ||||||||||||| |||    
T  37828695 gagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaaaaatcttgtggtattcaatcaagactct 37828596  T
Q  187 ttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggat 286  Q
    |||||||||       ||| || ||||||||||||||| | || |||| ||       |||| |    |||||||||||| ||||||||||| |||||||    
T  37828595 ttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttg----tggtattcaaaatcattcaaatttcgaaggat 37828500  T
Q  287 tgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  37828499 tgtttaataaattggattttgatggattttgtgggatt 37828462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 42786717 - 42786826
Alignment:
Q  207 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 306  Q
    |||||||||||||||||||||||||||| ||       ||||||    |||||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  42786717 tgtggtattcaatcaagactcttaatcatttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatatttt 42786812  T
Q  307 gatggattttgtgg 320  Q
    ||||||||||||||    
T  42786813 gatggattttgtgg 42786826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 113 - 324
Target Start/End: Original strand, 3436531 - 3436739
Alignment:
Q  113 tgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtgg 211  Q
    ||||||| |||||||||||||| |||| ||||||||||||||          |||| |||||||||||||||| |||||| |||        || ||||     
T  3436531 tgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaaaaaaaatattgtgttattcaatcaagattttttgtcgtttaaaaaaaatcttgtga 3436630  T
Q  212 tattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatgg 311  Q
    ||||||||||||||||||||||| ||        ||||     |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||     
T  3436631 tattcaatcaagactcttaatcatttaaaaaaaatctaa----tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatga 3436726  T
Q  312 attttgtgggatt 324  Q
    |||||||||||||    
T  3436727 attttgtgggatt 3436739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 48261203 - 48261273
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  48261203 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggatt 48261273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 37915903 - 37915973
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  37915903 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatt 37915973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 195
Target Start/End: Original strand, 41320639 - 41320769
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnn 162  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||  |||||||||| |||||||| ||| ||||||             
T  41320639 gggtgtattggatcatgattctaaaagattttaaaagatttttttattatgaaaaagtc--gtggtattcaatcaagactgtttccaatttaaaaaatgt 41320736  T
Q  163 nttgtattattcaatcaagattctttgtcattt 195  Q
     |||| |||||||||||||||||||||||||||    
T  41320737 cttgtgttattcaatcaagattctttgtcattt 41320769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 44770982 - 44770913
Alignment:
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  44770982 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggatt 44770913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 23987290 - 23987354
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  23987290 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgt 23987354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 27454210 - 27454142
Alignment:
Q  252 tagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||| |||||||||    
T  27454210 tagtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtgg 27454142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 320
Target Start/End: Complemental strand, 29649981 - 29649731
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnntt 165  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||||||| | |||||||||||| |||||||| ||| ||||||          ||    
T  29649981 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 29649882  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||  || || | ||||||||||||       ||| || ||||||||||||||||| || |||||||       ||    || ||||||||||||    
T  29649881 gtggtattagattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagt----cttgtggtattcaaa 29649786  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    | ||||||||||| ||| |||||||||||||||  ||||||||||||||||||||    
T  29649785 atcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 37915674 - 37915753
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||| ||||||||| | |||||||||||||||||| || |||||||| |||||||||||||| ||||||||    
T  37915674 gggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 37915753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 32322167 - 32322237
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||   |||||||||||||||||||||||    
T  32322167 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggatt 32322237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 25445979 - 25446059
Alignment:
Q  60 aggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaaga 141  Q
    ||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||| ||||||  |||||| ||||||    
T  25445979 aggagggtgtattggat-atgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtattattcaatcaaga 25446059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 20021236 - 20021323
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||||| || ||| |||| |||||||||||||||||| || |||||||| |||||||||||| | |||||||||||| ||||||    
T  20021236 tgtattggattataattttaagggattttaaaagactttttaattatgaaaaagtcttgtggtatttaatcaagactctttgcaattt 20021323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 318
Target Start/End: Complemental strand, 30967622 - 30967365
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nn 156  Q
    ||||| || |||||||||| |||||| || | |||||||||||| ||||| || |||||||| |||||||||||||| |||||||| ||| ||||||       
T  30967622 ttaggtggatgtattggattatgattttatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 30967523  T
Q  157 nnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtg 256  Q
           ||||  ||||||||||||| ||||||||||||       ||  || ||||||||||||||| | || |||||||       ||    || |||    
T  30967522 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagt----cttgtg 30967427  T
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    |||||||||| |||||||||||  ||||||||||||||||||  |||||||  |||||||||    
T  30967426 gtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgtgggattttgt 30967365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 44646721 - 44646800
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| |||| ||||  |||||||||||||||||||||| || || |||||||||||||||||||| ||||||||    
T  44646721 gggtgtattgaatcaagatttcaagagattttaaaagactttttaatgataaaaaaatcttgtggtattcaatcaagact 44646800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 9163156 - 9163218
Alignment:
Q  258 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 320  Q
    ||||||||| ||||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  9163156 tattcaaaatcattcaaatttcgaaggattgtttaataaattaaattttgatggattttgtgg 9163218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 64 - 154
Target Start/End: Original strand, 49469210 - 49469300
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    ||||||||||||||||||||| |||  |||||||||||||||||| |  |||| || |||||||||||| | |||||||||||| ||||||    
T  49469210 gggtgtattggatcatgattccaaggaattttaaaagactttttttttgtgaagaagtcttgtggtatttaatcaagactctttccaattt 49469300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 307
Target Start/End: Complemental strand, 49835126 - 49834890
Alignment:
Q  68 gtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa-tttnnnnnnnnnttg 166  Q
    ||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||| ||| ||| ||| ||          |||    
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 49835027  T
Q  167 tattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaa 266  Q
    |  ||||||||||||| ||||||||||||       | | || ||||||||||||||||| || |||||||       ||    || |||||||||||||    
T  49835026 tggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagt----cttgtggtattcaaaa 49834931  T
Q  267 gcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
     ||||||||||| |||||||||||||||||||  |||||||    
T  49834930 tcattcaaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 54853598 - 54853528
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||||  ||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||    
T  54853598 gtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggatt 54853528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 316
Target Start/End: Original strand, 12913301 - 12913362
Alignment:
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||  |||||||    
T  12913301 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgtgggatttt 12913362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 28371001 - 28371070
Alignment:
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||| |||||||||||| ||||||||||||||||||   |||||| || |||||||||||||    
T  28371001 tggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggatt 28371070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 12913131 - 12913195
Alignment:
Q  83 tctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||||||||||||||||| ||||| ||  ||||||| |||||||||||||| ||||||||||||    
T  12913131 tctaagagattttaaaagattttttaattttgaaaaagtcttgtggtattcaatcaagactcttt 12913195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 23987148 - 23987228
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    |||||||||| | |||| || | |||||||||||||||||| || |||||||| |||||||||||||| |||| |||||||    
T  23987148 tgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaatactcttt 23987228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 28483875 - 28483951
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||| || | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||||| ||||||||    
T  28483875 tgtattgaattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgaggtattcaatcaagact 28483951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 50018327 - 50018391
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||| | |||||||||||||||||||||||||||||||   ||||| |||||||||||    
T  50018327 gtggtattcaagatcattcaaattttgaaggattgtttaataaattgaattttaatggattttgt 50018391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 20021424 - 20021479
Alignment:
Q  269 attcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||| |||||||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggattttatgggatt 20021479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 27454408 - 27454337
Alignment:
Q  63 agggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattca 134  Q
    ||||| ||||||||||||||| ||||  ||||||||||||| |||||| |||||||||| ||||| ||||||    
T  27454408 agggtatattggatcatgattttaaggaattttaaaagactgttttataatgaaaaaattttgtgatattca 27454337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 36479361 - 36479299
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    |||||||||||||  |||||||||| |||||||| ||||||||||  ||||||||||||||||    
T  36479361 gtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttgatggatttt 36479299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 32684118 - 32684065
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  32684118 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 28483975 - 28484039
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||  |||||||  |||||||||    
T  28483975 gtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgtaggattttgt 28484039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 41725205 - 41725268
Alignment:
Q  258 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||| |||||||||||||||||||||||   |||||  |||||||||| |||||||||||||    
T  41725205 tattcaaaatcattcaaattttgaaggattgtt---taaattggattttgatgaattttgtgggatt 41725268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 28370859 - 28370938
Alignment:
Q  68 gtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||||||| | ||||||||   |||||||| |||||||| || |||||||| |||||||||||||| |||| |||||||    
T  28370859 gtattggattaggattctaatgaattttaaaggactttttaattatgaaaaagtcttgtggtattcaatcaaaactcttt 28370938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 36728123 - 36728052
Alignment:
Q  70 attggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaaga 141  Q
    ||||||| || ||||||| ||||||||||||| ||||| || |||||||| |||||| ||||||| ||||||    
T  36728123 attggattataattctaacagattttaaaagattttttaattatgaaaaagtcttgtagtattcaatcaaga 36728052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 32321983 - 32322057
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaaga 141  Q
    |||||||||| | |||||||  ||| ||||||||||||||| || |||||||| | |||||||||||| ||||||    
T  32321983 tgtattggattaggattctatcagaatttaaaagactttttaattatgaaaaagttttgtggtattcaatcaaga 32322057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 5800054 - 5800107
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||  |||||||    
T  5800054 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttg 5800107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 38230798 - 38230851
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||  |||||||| ||| |||||||||| ||||||||    
T  38230798 gattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagact 38230851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 151
Target Start/End: Complemental strand, 54853791 - 54853698
Alignment:
Q  58 ttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa 151  Q
    ||||| || |||||||||| | |||| || |  ||||||||||||||||| || | |||||| |||||||||||||| |||||||| ||| |||    
T  54853791 ttagggggatgtattggattaggattttatggaattttaaaagactttttaattacgaaaaagtcttgtggtattcaatcaagactttttgcaa 54853698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 56445474 - 56445413
Alignment:
Q  255 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 316  Q
    |||||||||||| ||||||||||| ||| |||||||||||||||  |||||||  |||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggatttt 56445413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 36479501 - 36479423
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    |||||||||| |  ||||||||| ||||||||||| ||||| || |||||||| |||||||||||||| |||| |||||||    
T  36479501 tgtattggattagaattctaaga-attttaaaaga-tttttaattatgaaaaagtcttgtggtattcaatcaaaactcttt 36479423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 24736336 - 24736422
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||||| | |||||||||  ||||||||||| ||||| || ||| |||  ||||||| |||||| |||||||||||| ||||||    
T  24736336 tgtattggattaggattctaaggaattttaaaagattttttaattatg-aaatgtcttgtgatattcaatcaagactctttgcaattt 24736422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 44775986 - 44775947
Alignment:
Q  68 gtattggatcatgattctaagagattttaaaagacttttt 107  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  44775986 gtattggatcatgattctaatggattttaaaagacttttt 44775947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 50018143 - 50018230
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    |||||||||| |  |||||| | |||||||||| | ||||| || || ||||| |||||||||||||| |||||||| ||| ||||||    
T  50018143 tgtattggattagaattctatgggattttaaaatattttttaattataaaaaagtcttgtggtattcaatcaagactttttacaattt 50018230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 28847160 - 28847111
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaa 139  Q
    ||||||||||||||||||||| || ||||| ||| |||||||||| ||||    
T  28847160 gattttaaaagacttttttataataaaaaagtctagtggtattcaatcaa 28847111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 44771095 - 44771046
Alignment:
Q  98 aagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    |||||||||| || |||||||| ||||||| |||||| ||||||||||||    
T  44771095 aagactttttgattatgaaaaagtcttgtgatattcaatcaagactcttt 44771046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 49501641 - 49501588
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    |||| |||||||| ||||||||||| ||| |||||||||||||||  |||||||    
T  49501641 gtggcattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 49501588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 49501827 - 49501762
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtatt 132  Q
    |||||| ||| | ||||||| | |||||||||||| ||||| || |||||||| ||||||||||||    
T  49501827 tgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtatt 49501762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 49507706 - 49507653
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 307  Q
    |||| |||||||| ||||||||||| ||| |||||||||||||||  |||||||    
T  49507706 gtggcattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 49507653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 49507892 - 49507827
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtatt 132  Q
    |||||| ||| | ||||||| | |||||||||||| ||||| || |||||||| ||||||||||||    
T  49507892 tgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtatt 49507827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 53271935 - 53271988
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||  || ||||| ||||||| |||||| ||||||||    
T  53271935 gattttaaaagacttttttaaaataaaaaagtcttgtgatattcaatcaagact 53271988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 28100639 - 28100587
Alignment:
Q  92 ttttaaaagactttttt-atcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||| || || ||||| |||||||||||||| ||||||||    
T  28100639 ttttaaaagactttttttattataaaaaagtcttgtggtattcaatcaagact 28100587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 32684235 - 32684179
Alignment:
Q  91 attttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    |||||||| |||||||| || |||||||| |||||||||||||| | |||| |||||    
T  32684235 attttaaaggactttttaattatgaaaaagtcttgtggtattcaattaagattcttt 32684179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 34141680 - 34141628
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaa 119  Q
    |||||||||| | |||| || |||||||||||||||||||| || ||||||||    
T  34141680 tgtattggattaagattttatgagattttaaaagactttttaattatgaaaaa 34141628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 15347 - 15093
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn 163  Q
    ||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||             
T  15347 gggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagt 15251  T
Q  164 -ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| ||| |||||||||||||||||||||||||||       ||||||    ||||||||    
T  15250 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattc 15155  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15154 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 15093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 15990 - 15736
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn 163  Q
    ||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||             
T  15990 gggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagt 15894  T
Q  164 -ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattc 262  Q
     |||| |||||||||||||||||||||||||||       ||| ||| |||||||||||||||||||||||||||       ||||||    ||||||||    
T  15893 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattc 15798  T
Q  263 aaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15797 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 15736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 53 - 321
Target Start/End: Original strand, 100090 - 100355
Alignment:
Q  53 aaaatttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaat 152  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| || |||||| |||| || |||| ||||    
T  100090 aaaatttaagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttctgatattcaatcaacacactttccaat 100189  T
Q  153 tt-nnnnnnnnnttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagc 251  Q
    ||          |||| |||||||||||||||||||||||||||       ||| ||||||| |||||||||||||||||||||||       ||    |    
T  100190 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagt----c 100285  T
Q  252 tagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtggg 321  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  100286 tagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtggg 100355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 164 - 324
Target Start/End: Original strand, 102084 - 102242
Alignment:
Q  164 ttgtattattcaatcaagattctttgtcatttnnnnnnng--tcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtatt 261  Q
    |||| |||||||||||||||||||||||||||       |  || |||||||||||||||||||||||||||||||       ||||||    |||||||    
T  102084 ttgtgttattcaatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtatt 102179  T
Q  262 caaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  102180 caaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggatt 102242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 102026 - 102108
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| |  ||||| | ||||| |||||| |||||| |||||    
T  102026 gggtgtattagatcatgattctaagggattttaaaagacttttttatta-aaaaaagttttgtgttattcaatcaagattcttt 102108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 170 - 324
Target Start/End: Complemental strand, 39105 - 38955
Alignment:
Q  170 tattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagca 269  Q
    ||||||||||||||||||| ||||||       ||| ||||||||||||| |||||||||||||||||       ||||||    || ||||||||| ||    
T  39105 tattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctag----tgatattcaaaatca 39010  T
Q  270 ttcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39009 ttcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggatt 38955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 39170 - 39087
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  39170 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattcttt 39087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 114 - 320
Target Start/End: Complemental strand, 806 - 603
Alignment:
Q  114 gaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggt 212  Q
    |||||| |||||||||||||| |||||||||||| ||||||          |||| |||||||||||||||||||||||||||       ||  ||||||    
T  806 gaaaaagtcttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggt 707  T
Q  213 attcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatgga 312  Q
    |||||||||| ||||||||||||||        | |   ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  706 attcaatcaaaactcttaatcacttaaat----tttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatgga 611  T
Q  313 ttttgtgg 320  Q
    ||||||||    
T  610 ttttgtgg 603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 840 - 807
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaag 100  Q
    ||||||||||||||| ||||||||||||||||||    
T  840 tgtattggatcatgaatctaagagattttaaaag 807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 154
Target Start/End: Original strand, 8654 - 8742
Alignment:
Q  66 gtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt 154  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | |||||||||||| |||||||| ||||||||||    
T  8654 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaattt 8742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 38777 - 38665
Alignment:
Q  207 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 306  Q
    |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  38777 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaggattgtttaat-aatcagatttt 38683  T
Q  307 gatggattttgtgggatt 324  Q
    ||||||||||||||||||    
T  38682 gatggattttgtgggatt 38665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 38838 - 38755
Alignment:
Q  63 agggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactctt 146  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| |||||||||||||| |||||||||||    
T  38838 agggtgtattggatcatgattctaagggattttaaaagatatttttatcatgaaaaagtcttgtggtattcaatcaagactctt 38755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 756 - 1010
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnnnnnnnnn-tt 165  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||| ||          ||    
T  756 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaattcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 855  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctag-ctagtggtattcaa 264  Q
    ||  ||||||||||||| ||||||||||||        ||||| ||||||||||||||||| || |||||||           || || |||||||||||    
T  856 gtggtattcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaa----agtcttgtggtattcaa 951  T
Q  265 aagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    || ||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||||    
T  952 aatcattcaaatttcgaagaattatttaataaat-agattttgatggattttgtgggatt 1010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 314
Target Start/End: Original strand, 4083 - 4337
Alignment:
Q  57 tttaggagggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaatttnn 156  Q
    |||||| || |||||||||| | |||||||   |||||||||||||||||| ||  ||||||| |||||||||||||| |||||||| ||| ||| ||      
T  4083 tttagggggatgtattggattaggattctataggattttaaaagactttttaattttgaaaaagtcttgtggtattcaatcaagactttttgcaaattaa 4182  T
Q  157 nnnnnnn-ttgtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagt 255  Q
            ||||  ||||||||||||| ||||||| ||||       ||| || ||||||||||||||||| || |||| ||       |||| |    |    
T  4183 aaaaagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttg----t 4278  T
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatt 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||    
T  4279 ggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 4337  T

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Target: scaffold0543 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 324
Target Start/End: Original strand, 10453 - 10707
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaattt-nnnnnnnnntt 165  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||| ||||||          ||    
T  10453 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 10552  T
Q  166 gtattattcaatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaa 265  Q
    ||  ||||||||||||| ||||||||||||       ||| || |||||||||||||||||  | |||| ||           | || ||||||||||||    
T  10553 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaa----atcttgtggtattcaaa 10648  T
Q  266 agcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    | |||||||||||  ||||||||||||||||||   ||||||||||||||| |||||||    
T  10649 atcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggatt 10707  T

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Target: scaffold0306 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 13817 - 13897
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||||||| |||||||||||||| ||||||||||||    
T  13817 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactcttt 13897  T

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Target: scaffold0306; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 13959 - 14023
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| |||||||||||  || |||||||||||||||  ||||||||||||||||||    
T  13959 gtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgt 14023  T

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Target: scaffold0152 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 21510 - 21430
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||||||| |||||||||||||| ||||||||||||    
T  21510 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactcttt 21430  T

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Target: scaffold0152; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 21368 - 21304
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 318  Q
    ||||||||||||| |||||||||||  || |||||||||||||||  ||||||||||||||||||    
T  21368 gtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgt 21304  T

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Target: scaffold0042 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 58206 - 58136
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  ||||||||||||||||||||||||    
T  58206 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggatt 58136  T

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Target: scaffold0042; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 58348 - 58272
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    |||||||||| | ||||| | | |||||||||||||||||| || |||||||| |||||||||||||| ||||||||    
T  58348 tgtattggattaggattccatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 58272  T

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Target: scaffold0110 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 39747 - 39677
Alignment:
Q  254 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||||| |||||||| || |||||||| ||||||||||  ||||||||||||||||||||||||    
T  39747 gtggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggatt 39677  T

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Target: scaffold0110; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 39918 - 39847
Alignment:
Q  80 gattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttttcaa 151  Q
    ||||||| ||||||||||||||| |||| || |||||||| |||||||||||||| |||||||| ||| |||    
T  39918 gattctatgagattttaaaagaccttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaa 39847  T

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Target: scaffold0347 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 14788 - 14864
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||   ||||||| |||||||||||||||||||| || |||||||| |||||||||||||| ||||||||    
T  14788 tgtattggatttggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 14864  T

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Target: scaffold0054 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 37035 - 36967
Alignment:
Q  256 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||||||||| |||| |||||| |||| ||||||||||||||  ||||||||||||||||||||||||    
T  37035 ggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggatt 36967  T

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Target: scaffold0054; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 37114 - 37057
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagactcttt 147  Q
    |||||||||||||||||| || |||||||| ||||||| |||||| ||||||||||||    
T  37114 gattttaaaagactttttaattatgaaaaagtcttgtgctattcaatcaagactcttt 37057  T

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Target: scaffold0472 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 1969 - 1899
Alignment:
Q  64 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatcttgtggtattca 134  Q
    |||||||||| |||| |||| ||||||||||||||||||||||| || || ||||||| | ||||||||||    
T  1969 gggtgtattgaatcaagattttaagagattttaaaagactttttaataataaaaaaatttggtggtattca 1899  T

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Target: scaffold0287 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 11846 - 11793
Alignment:
Q  90 gattttaaaagacttttttatcatgaaaaaatcttgtggtattcattcaagact 143  Q
    ||||||||||||||||||||| || ||||| ||||||| |||||| ||||||||    
T  11846 gattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagact 11793  T

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Target: scaffold0839 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 3792 - 3752
Alignment:
Q  284 gattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  3792 gattgtttaataaattggattttgatggattttgtgggatt 3752  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 199905 - 199972
Alignment:
Q  257 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggatt 324  Q
    ||||| |||| ||||||||||||||| || ||||||||||||   |||||||| ||||||||| ||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagatt 199972  T

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Target: scaffold0492 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 12087 - 12030
Alignment:
Q  67 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaatctt 124  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||| ||||    
T  12087 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtctt 12030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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