View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2600_high_12 (Length: 387)
Name: NF2600_high_12
Description: NF2600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2600_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 372
Target Start/End: Complemental strand, 31097030 - 31096660
Alignment:
| Q |
1 |
caatagcaaaacttaaatgaaacccttcatcactccaatttagtggagttagaaattttactccaaataagaaactaaaacaaccatgaatagaaatatt |
100 |
Q |
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| T |
31097030 |
caatagcaaaacttaaatgaaagccttcatcactccaattaagtggagttagaaattt-actccaaataagaaactaaaacaaccatgaatagaaatatt |
31096932 |
T |
|
| Q |
101 |
aaactaatcaacttaaattttctctgtaagaggagaacacttacttagcatcataacaaatgaaagagcattgtctataagttataaggaagggatcaga |
200 |
Q |
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| T |
31096931 |
aaactaatcaacttaaattttctctgtaagaggagaacacttacttagcatcataacaaatgaaagagcattgtctataagtcatagggaagggatcaga |
31096832 |
T |
|
| Q |
201 |
ggaaccaaattaatgatgattccgcggtcttgaaaaattactactattctgagggtgttgcatgctagtaaagcctatgtccggaacaaatagagcgtta |
300 |
Q |
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| T |
31096831 |
ggaaccaaattaatgatgattccgcggtcttgaaaaattactactattctgagggtgttgcatgctagtgaagcctatgtccggaacaaatagagcatta |
31096732 |
T |
|
| Q |
301 |
tcgaatgaataccgagggtttttcggccagtttagcccagaagctgtaggtggtgaaggaatctgaggaact |
372 |
Q |
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| T |
31096731 |
tcgaatgaataccgagggttttttggccagtttagccctgaagctgtaggtggtgaagggatctgaggaact |
31096660 |
T |
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