View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2600_high_29 (Length: 238)
Name: NF2600_high_29
Description: NF2600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2600_high_29 |
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Alignment Details
Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 37923698 - 37923548
Alignment:
| Q |
76 |
tttgcttgatgtgtatcaacatctgatcccgtgatataattagatcattttcttaactatgtttactcctaaaaaattgtgagtaatttatcaaacaatc |
175 |
Q |
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| T |
37923698 |
tttgtttgatgtgtatcaacatccgatcccgtgatataattagatcattttcttaactatgtttactccaaaaaaattgtgagtaatttatcaaacaatc |
37923599 |
T |
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| Q |
176 |
----agttggccacgtaagtaaatttgtaagtggtatctccaaactaattt |
222 |
Q |
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|||||||||| |||||||||||||||||||||| ||||||||||| |
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| T |
37923598 |
aatgagttggccacataagtaaatttgtaagtggtatacacaaactaattt |
37923548 |
T |
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