View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2600_low_20 (Length: 328)
Name: NF2600_low_20
Description: NF2600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2600_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 56 - 315
Target Start/End: Complemental strand, 18014763 - 18014504
Alignment:
| Q |
56 |
gtgttgggtgttaacttactctatagtgtttttcggtaggtgtaaattagcccatgtatatctgtgtattggtcatttattttagtcaagaaaacatatc |
155 |
Q |
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| T |
18014763 |
gtgttggacgttaatttactatatagtgtttttcggtaggtgtaaattaacccatgtatatctgtttgttggtcatttattttagtcaagaaaacatatc |
18014664 |
T |
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| Q |
156 |
gggcattattctaaataaatatgnnnnnnnnnnnnngatttatttattctcaaaatatagaccacattaaaagaaacttatttatatattatttttgtgc |
255 |
Q |
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| T |
18014663 |
gggcattattctaaataaatatgtctttctttttttgatttatttattctcaaaatatagaccacattaaaagaaacttatttatatattatttttgtgc |
18014564 |
T |
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| Q |
256 |
ttaaacgtttgaattatttaaattttatgtaacagtaataaattaaattccacttttcct |
315 |
Q |
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| T |
18014563 |
ttaaacgtttgaattatttaaattttatgtaacagtaataaattaaattccacttttcct |
18014504 |
T |
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