View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2600_low_34 (Length: 210)

Name: NF2600_low_34
Description: NF2600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2600_low_34
NF2600_low_34
[»] chr3 (70 HSPs)
chr3 (1-146)||(32462626-32462771)
chr3 (2-144)||(15773140-15773281)
chr3 (1-143)||(37990707-37990848)
chr3 (1-146)||(22304517-22304659)
chr3 (13-145)||(54017896-54018027)
chr3 (1-140)||(42342158-42342296)
chr3 (1-103)||(32462968-32463070)
chr3 (1-99)||(35946515-35946612)
chr3 (2-103)||(45901702-45901803)
chr3 (1-144)||(29644649-29644792)
chr3 (1-146)||(41359833-41359972)
chr3 (1-103)||(43346859-43346960)
chr3 (1-102)||(29644970-29645070)
chr3 (1-102)||(52634666-52634765)
chr3 (1-143)||(21832411-21832549)
chr3 (1-145)||(3135141-3135282)
chr3 (1-99)||(33803320-33803417)
chr3 (1-102)||(42342456-42342556)
chr3 (1-129)||(22304023-22304143)
chr3 (1-103)||(37991045-37991146)
chr3 (1-102)||(1634382-1634483)
chr3 (1-102)||(12114630-12114730)
chr3 (1-102)||(15772844-15772944)
chr3 (2-83)||(39935024-39935104)
chr3 (1-127)||(4823622-4823745)
chr3 (7-102)||(25739499-25739593)
chr3 (8-103)||(25755383-25755477)
chr3 (2-100)||(45395722-45395819)
chr3 (1-140)||(9240104-9240239)
chr3 (17-102)||(31190007-31190091)
chr3 (1-102)||(32589694-32589793)
chr3 (1-141)||(11661902-11662041)
chr3 (10-102)||(49336764-49336855)
chr3 (36-132)||(22304208-22304301)
chr3 (1-86)||(39389076-39389160)
chr3 (13-102)||(54018278-54018366)
chr3 (2-102)||(39914242-39914341)
chr3 (7-86)||(51886567-51886645)
chr3 (1-99)||(8327897-8327994)
chr3 (1-102)||(3135522-3135629)
chr3 (1-82)||(42584890-42584970)
chr3 (1-102)||(53118043-53118142)
chr3 (16-99)||(33175747-33175829)
chr3 (15-86)||(50612534-50612604)
chr3 (1-102)||(53577354-53577454)
chr3 (1-84)||(7767382-7767464)
chr3 (24-102)||(11661525-11661602)
chr3 (1-51)||(33362361-33362411)
chr3 (1-97)||(39336297-39336392)
chr3 (146-210)||(41359656-41359720)
chr3 (149-209)||(54018092-54018152)
chr3 (68-139)||(2299930-2300000)
chr3 (35-102)||(43346640-43346706)
chr3 (1-51)||(44160612-44160662)
chr3 (150-199)||(25739330-25739379)
chr3 (149-210)||(32462794-32462855)
chr3 (18-86)||(37726510-37726577)
chr3 (160-210)||(33803157-33803207)
chr3 (149-206)||(3135349-3135406)
chr3 (1-33)||(22303727-22303759)
chr3 (1-49)||(46546393-46546441)
chr3 (1-41)||(52634990-52635030)
chr3 (14-85)||(3384347-3384417)
chr3 (150-210)||(22304398-22304457)
chr3 (156-206)||(37990878-37990928)
chr3 (1-99)||(47964586-47964683)
chr3 (64-140)||(12747882-12747956)
chr3 (161-210)||(53577568-53577616)
chr3 (1-49)||(12749211-12749259)
chr3 (96-140)||(52634889-52634933)
[»] chr6 (50 HSPs)
chr6 (1-143)||(16108012-16108153)
chr6 (1-210)||(16454778-16454997)
chr6 (1-139)||(2578511-2578647)
chr6 (1-145)||(29518869-29519010)
chr6 (1-146)||(10074059-10074200)
chr6 (1-146)||(2378075-2378216)
chr6 (31-137)||(2579203-2579308)
chr6 (1-102)||(2377744-2377844)
chr6 (1-102)||(16454565-16454665)
chr6 (1-134)||(10074431-10074560)
chr6 (1-102)||(2579940-2580040)
chr6 (4-127)||(3409627-3409747)
chr6 (1-104)||(32460648-32460750)
chr6 (1-102)||(16107668-16107768)
chr6 (1-86)||(29518509-29518593)
chr6 (1-86)||(32741185-32741269)
chr6 (1-86)||(3409265-3409349)
chr6 (1-86)||(3415464-3415548)
chr6 (1-102)||(9062417-9062517)
chr6 (1-146)||(10073684-10073823)
chr6 (1-86)||(35210210-35210294)
chr6 (15-102)||(5832108-5832194)
chr6 (1-140)||(6071085-6071222)
chr6 (1-86)||(593777-593861)
chr6 (1-102)||(1950253-1950353)
chr6 (1-82)||(3058236-3058316)
chr6 (1-86)||(14748406-14748490)
chr6 (1-86)||(26544055-26544139)
chr6 (1-146)||(2579560-2579701)
chr6 (1-102)||(2843544-2843645)
chr6 (1-86)||(1127366-1127450)
chr6 (1-102)||(6999864-6999964)
chr6 (1-86)||(1846754-1846838)
chr6 (2-99)||(10911558-10911655)
chr6 (146-210)||(2578726-2578790)
chr6 (146-210)||(16107883-16107947)
chr6 (147-210)||(2579384-2579447)
chr6 (1-132)||(8481888-8482016)
chr6 (60-132)||(33605938-33606007)
chr6 (1-119)||(2578903-2579016)
chr6 (2-102)||(5958672-5958771)
chr6 (150-209)||(2579768-2579827)
chr6 (162-210)||(2579017-2579065)
chr6 (149-209)||(10073886-10073945)
chr6 (2-146)||(2975501-2975641)
chr6 (8-51)||(14789279-14789322)
chr6 (103-140)||(12092201-12092238)
chr6 (1-99)||(12092550-12092647)
chr6 (18-72)||(35210498-35210551)
chr6 (98-135)||(35210448-35210485)
[»] scaffold0734 (3 HSPs)
scaffold0734 (1-145)||(5724-5867)
scaffold0734 (14-102)||(5386-5473)
scaffold0734 (154-210)||(5597-5653)
[»] chr7 (60 HSPs)
chr7 (1-145)||(7553972-7554115)
chr7 (1-142)||(30244220-30244360)
chr7 (1-146)||(30245023-30245167)
chr7 (1-144)||(22566730-22566872)
chr7 (1-146)||(45434584-45434726)
chr7 (1-102)||(7517570-7517670)
chr7 (1-144)||(14681460-14681600)
chr7 (1-104)||(1085684-1085786)
chr7 (21-143)||(30244649-30244771)
chr7 (18-120)||(30255311-30255412)
chr7 (1-127)||(37533078-37533201)
chr7 (1-102)||(40094842-40094942)
chr7 (2-102)||(24177425-24177524)
chr7 (18-118)||(30245468-30245567)
chr7 (1-102)||(23445-23545)
chr7 (1-102)||(34218102-34218202)
chr7 (1-102)||(45433231-45433331)
chr7 (1-101)||(36939801-36939900)
chr7 (1-102)||(11845183-11845281)
chr7 (1-146)||(1085316-1085463)
chr7 (1-102)||(16569186-16569286)
chr7 (1-102)||(16596376-16596476)
chr7 (1-102)||(22567107-22567206)
chr7 (1-102)||(41910662-41910762)
chr7 (3-99)||(28301613-28301708)
chr7 (1-97)||(40230359-40230454)
chr7 (1-102)||(24838769-24838870)
chr7 (1-103)||(47129084-47129185)
chr7 (1-86)||(29157571-29157655)
chr7 (1-102)||(30032557-30032657)
chr7 (1-86)||(37533432-37533516)
chr7 (1-102)||(45754706-45754805)
chr7 (1-97)||(6054555-6054650)
chr7 (146-210)||(48243352-48243416)
chr7 (75-146)||(48243218-48243289)
chr7 (1-84)||(19122740-19122821)
chr7 (1-99)||(8128509-8128606)
chr7 (23-101)||(36109007-36109084)
chr7 (9-102)||(118377-118469)
chr7 (13-102)||(36534864-36534952)
chr7 (1-102)||(36622950-36623050)
chr7 (1-102)||(43241485-43241585)
chr7 (151-210)||(40094664-40094723)
chr7 (2-102)||(20599304-20599403)
chr7 (10-86)||(44361541-44361615)
chr7 (15-102)||(41854625-41854710)
chr7 (41-145)||(40094502-40094602)
chr7 (146-208)||(45754918-45754980)
chr7 (1-102)||(9901635-9901733)
chr7 (64-140)||(4124218-4124293)
chr7 (1-49)||(30253534-30253582)
chr7 (50-102)||(36967345-36967397)
chr7 (154-206)||(45433445-45433497)
chr7 (1-45)||(28300321-28300366)
chr7 (153-206)||(30244559-30244612)
chr7 (150-210)||(28300474-28300533)
chr7 (150-206)||(30245362-30245418)
chr7 (75-144)||(37345867-37345933)
chr7 (101-146)||(28300365-28300410)
chr7 (167-207)||(1085528-1085568)
[»] chr5 (64 HSPs)
chr5 (1-139)||(26074565-26074702)
chr5 (1-146)||(26074850-26074994)
chr5 (1-146)||(13415828-13415971)
chr5 (4-207)||(3295086-3295306)
chr5 (1-102)||(26075230-26075330)
chr5 (1-146)||(6500771-6500912)
chr5 (1-102)||(6224186-6224286)
chr5 (1-145)||(24489274-24489412)
chr5 (4-102)||(40296386-40296483)
chr5 (1-102)||(15370089-15370189)
chr5 (1-86)||(18603188-18603272)
chr5 (1-120)||(26074214-26074329)
chr5 (1-102)||(34753093-34753193)
chr5 (1-86)||(41170640-41170724)
chr5 (4-143)||(624148-624283)
chr5 (1-102)||(11417045-11417143)
chr5 (4-102)||(36492288-36492385)
chr5 (1-102)||(299479-299579)
chr5 (1-90)||(9498722-9498810)
chr5 (1-102)||(25327925-25328025)
chr5 (1-86)||(32487400-32487483)
chr5 (1-99)||(36568635-36568732)
chr5 (1-86)||(27502104-27502188)
chr5 (1-102)||(42405664-42405764)
chr5 (4-140)||(31509576-31509710)
chr5 (1-97)||(35150002-35150096)
chr5 (1-100)||(3295412-3295509)
chr5 (13-99)||(1028597-1028682)
chr5 (1-99)||(41632775-41632872)
chr5 (1-86)||(6500457-6500540)
chr5 (1-102)||(12662720-12662820)
chr5 (1-100)||(42508604-42508702)
chr5 (6-102)||(35914839-35914934)
chr5 (4-102)||(35167909-35168006)
chr5 (50-103)||(35150736-35150789)
chr5 (50-103)||(35151027-35151080)
chr5 (10-99)||(39309677-39309764)
chr5 (154-210)||(26075058-26075114)
chr5 (11-86)||(26074324-26074398)
chr5 (1-80)||(33747783-33747861)
chr5 (1-134)||(36521964-36522093)
chr5 (154-208)||(13416041-13416095)
chr5 (1-47)||(15370446-15370492)
chr5 (25-102)||(300949-301025)
chr5 (154-210)||(25328139-25328195)
chr5 (1-143)||(38427508-38427637)
chr5 (2-102)||(41635260-41635359)
chr5 (16-86)||(7768856-7768925)
chr5 (53-102)||(26900089-26900138)
chr5 (1-86)||(29549323-29549407)
chr5 (18-86)||(5723876-5723943)
chr5 (154-206)||(15370286-15370338)
chr5 (80-136)||(15370370-15370426)
chr5 (99-146)||(9498411-9498458)
chr5 (1-51)||(26590978-26591028)
chr5 (150-207)||(624022-624079)
chr5 (1-86)||(2411013-2411097)
chr5 (57-146)||(13785732-13785818)
chr5 (65-100)||(36527214-36527249)
chr5 (52-90)||(5660300-5660338)
chr5 (1-86)||(623824-623908)
chr5 (31-84)||(6225052-6225104)
chr5 (166-210)||(6224398-6224442)
chr5 (154-206)||(26074435-26074487)
[»] chr8 (74 HSPs)
chr8 (1-146)||(30359555-30359699)
chr8 (1-144)||(9309303-9309445)
chr8 (2-143)||(34835160-34835298)
chr8 (3-146)||(1013941-1014081)
chr8 (2-139)||(34835427-34835564)
chr8 (2-139)||(34835693-34835830)
chr8 (1-146)||(8918832-8918975)
chr8 (5-116)||(9482676-9482784)
chr8 (1-146)||(3670008-3670150)
chr8 (1-144)||(40518533-40518672)
chr8 (13-144)||(45121736-45121865)
chr8 (1-102)||(3038358-3038458)
chr8 (13-146)||(45122952-45123082)
chr8 (1-102)||(70342-70441)
chr8 (1-102)||(25561884-25561984)
chr8 (1-102)||(30359261-30359361)
chr8 (19-146)||(18372342-18372466)
chr8 (6-144)||(18373004-18373140)
chr8 (2-86)||(147457-147540)
chr8 (50-146)||(147776-147871)
chr8 (1-103)||(34834865-34834966)
chr8 (19-147)||(18372785-18372909)
chr8 (1-102)||(33113435-33113535)
chr8 (1-97)||(1513983-1514078)
chr8 (1-86)||(3669693-3669777)
chr8 (6-99)||(41972151-41972243)
chr8 (1-86)||(45121978-45122062)
chr8 (13-103)||(8794100-8794189)
chr8 (1-99)||(9608738-9608835)
chr8 (50-142)||(6731856-6731946)
chr8 (5-99)||(9308970-9309065)
chr8 (1-146)||(18371729-18371866)
chr8 (13-85)||(41416251-41416322)
chr8 (9-97)||(45122133-45122220)
chr8 (1-146)||(45122579-45122714)
chr8 (1-80)||(5420663-5420741)
chr8 (1-67)||(9483255-9483320)
chr8 (3-103)||(6876932-6877032)
chr8 (1-82)||(18372062-18372142)
chr8 (50-146)||(18372487-18372581)
chr8 (1-86)||(18380085-18380169)
chr8 (9-102)||(37544566-37544658)
chr8 (1-102)||(43274847-43274947)
chr8 (146-210)||(9483080-9483144)
chr8 (18-82)||(25561729-25561792)
chr8 (1-86)||(30441087-30441175)
chr8 (2-128)||(4154350-4154473)
chr8 (1-79)||(20870641-20870718)
chr8 (1-100)||(40518061-40518161)
chr8 (150-206)||(147658-147714)
chr8 (146-210)||(9482917-9482981)
chr8 (1-79)||(3037776-3037853)
chr8 (66-144)||(43274699-43274777)
chr8 (14-86)||(1014326-1014397)
chr8 (6-94)||(18372676-18372762)
chr8 (10-86)||(20130455-20130529)
chr8 (151-210)||(45122831-45122890)
chr8 (1-51)||(9507822-9507872)
chr8 (1-99)||(9620744-9620841)
chr8 (1-51)||(32305517-32305567)
chr8 (1-51)||(40579574-40579624)
chr8 (2-51)||(9609125-9609174)
chr8 (1-86)||(32640600-32640679)
chr8 (169-210)||(34835077-34835118)
chr8 (150-206)||(9608960-9609016)
chr8 (1-51)||(18373238-18373288)
chr8 (160-210)||(30359474-30359523)
chr8 (14-99)||(33831971-33832055)
chr8 (1-101)||(5915863-5915957)
chr8 (150-210)||(1014141-1014199)
chr8 (149-206)||(18371888-18371945)
chr8 (2-86)||(43398137-43398223)
chr8 (162-202)||(18372616-18372656)
chr8 (5-49)||(40991795-40991839)
[»] chr1 (68 HSPs)
chr1 (1-146)||(26661590-26661734)
chr1 (4-144)||(41157323-41157462)
chr1 (1-146)||(44290526-44290668)
chr1 (1-145)||(34364871-34365015)
chr1 (12-146)||(3537226-3537357)
chr1 (1-146)||(37556057-37556201)
chr1 (1-100)||(17294569-17294667)
chr1 (1-143)||(22077563-22077701)
chr1 (1-120)||(11977252-11977370)
chr1 (1-146)||(48588556-48588698)
chr1 (1-102)||(41142362-41142462)
chr1 (1-102)||(41184493-41184593)
chr1 (1-86)||(44290893-44290977)
chr1 (1-100)||(38804423-38804521)
chr1 (1-144)||(66155-66296)
chr1 (2-146)||(30630707-30630847)
chr1 (1-103)||(34364496-34364597)
chr1 (1-102)||(26661966-26662066)
chr1 (1-102)||(29798189-29798289)
chr1 (1-102)||(41156981-41157081)
chr1 (2-86)||(3550726-3550809)
chr1 (1-102)||(31767229-31767329)
chr1 (1-102)||(34649428-34649528)
chr1 (13-102)||(37850680-37850768)
chr1 (1-100)||(3875399-3875497)
chr1 (1-82)||(3537667-3537747)
chr1 (1-86)||(32594784-32594868)
chr1 (1-86)||(41759489-41759573)
chr1 (2-99)||(44685449-44685546)
chr1 (13-86)||(50052103-50052175)
chr1 (16-96)||(45084378-45084457)
chr1 (1-100)||(5320033-5320131)
chr1 (1-82)||(44043840-44043926)
chr1 (10-102)||(21378118-21378209)
chr1 (1-101)||(40082398-40082496)
chr1 (1-100)||(66540-66638)
chr1 (1-84)||(14318875-14318957)
chr1 (64-146)||(50051781-50051861)
chr1 (1-87)||(5575109-5575194)
chr1 (1-86)||(9955913-9955999)
chr1 (1-99)||(24132053-24132150)
chr1 (1-103)||(39066268-39066369)
chr1 (1-140)||(22077178-22077325)
chr1 (1-99)||(24600382-24600479)
chr1 (9-82)||(5528830-5528902)
chr1 (150-207)||(34649644-34649701)
chr1 (21-101)||(37555721-37555800)
chr1 (9-100)||(22793270-22793360)
chr1 (2-80)||(45494043-45494124)
chr1 (150-210)||(34364710-34364770)
chr1 (50-102)||(35154155-35154207)
chr1 (5-51)||(22077900-22077946)
chr1 (97-139)||(24448233-24448275)
chr1 (23-97)||(30630912-30630986)
chr1 (146-208)||(37555932-37555994)
chr1 (74-140)||(47380258-47380323)
chr1 (97-142)||(1188391-1188436)
chr1 (1-42)||(41184156-41184197)
chr1 (15-102)||(45839617-45839707)
chr1 (178-210)||(66395-66427)
chr1 (7-51)||(4956231-4956275)
chr1 (64-144)||(47379915-47379991)
chr1 (26-92)||(4266875-4266940)
chr1 (109-146)||(3537495-3537532)
chr1 (1-97)||(1187432-1187527)
chr1 (150-210)||(11977149-11977208)
chr1 (178-210)||(22077418-22077450)
chr1 (150-206)||(41157200-41157256)
[»] chr2 (67 HSPs)
chr2 (24-146)||(40733829-40733950)
chr2 (1-120)||(15880235-15880353)
chr2 (1-146)||(5542693-5542835)
chr2 (13-146)||(38796298-38796431)
chr2 (1-145)||(40679697-40679837)
chr2 (1-142)||(28531382-28531519)
chr2 (34-145)||(36785664-36785774)
chr2 (1-126)||(37106156-37106278)
chr2 (13-134)||(40733475-40733595)
chr2 (1-102)||(36005948-36006047)
chr2 (4-108)||(6421369-6421472)
chr2 (16-143)||(7598560-7598684)
chr2 (1-144)||(29676851-29676998)
chr2 (1-146)||(14745362-14745503)
chr2 (1-86)||(36178673-36178757)
chr2 (1-86)||(14745735-14745819)
chr2 (1-86)||(37105930-37106014)
chr2 (1-146)||(6422065-6422200)
chr2 (1-104)||(6712964-6713066)
chr2 (57-142)||(3673035-3673120)
chr2 (1-102)||(38796688-38796788)
chr2 (1-86)||(41283543-41283627)
chr2 (1-114)||(31468818-31468926)
chr2 (3-102)||(31899496-31899594)
chr2 (1-127)||(36178337-36178460)
chr2 (1-99)||(962591-962688)
chr2 (1-102)||(15511563-15511661)
chr2 (1-103)||(16542438-16542539)
chr2 (1-86)||(5543066-5543150)
chr2 (1-102)||(28254305-28254405)
chr2 (1-137)||(37894760-37894892)
chr2 (1-99)||(42514642-42514739)
chr2 (14-95)||(1769889-1769969)
chr2 (1-86)||(33731654-33731738)
chr2 (1-97)||(35580792-35580886)
chr2 (2-101)||(12529097-12529195)
chr2 (1-140)||(30323417-30323554)
chr2 (1-74)||(36178239-36178311)
chr2 (70-139)||(40734231-40734300)
chr2 (1-140)||(30313131-30313267)
chr2 (50-107)||(6421289-6421346)
chr2 (10-99)||(37632674-37632762)
chr2 (150-206)||(40734090-40734146)
chr2 (1-99)||(16590881-16590973)
chr2 (1-99)||(5367448-5367545)
chr2 (1-95)||(7598225-7598318)
chr2 (4-84)||(29676543-29676622)
chr2 (13-81)||(40163453-40163520)
chr2 (1-96)||(29874091-29874185)
chr2 (1-84)||(37895129-37895211)
chr2 (13-102)||(31259696-31259787)
chr2 (29-142)||(42514965-42515078)
chr2 (1-130)||(29873605-29873732)
chr2 (81-146)||(35580532-35580597)
chr2 (1-49)||(31385779-31385827)
chr2 (1-134)||(33561519-33561648)
chr2 (1-79)||(23346250-23346326)
chr2 (2-76)||(28254181-28254254)
chr2 (57-102)||(3672709-3672754)
chr2 (97-142)||(34481598-34481643)
chr2 (150-210)||(36785840-36785901)
chr2 (150-210)||(7598431-7598490)
chr2 (13-140)||(41678447-41678572)
chr2 (163-210)||(3672904-3672951)
chr2 (151-210)||(40679895-40679954)
chr2 (160-210)||(38796463-38796513)
chr2 (1-49)||(2336666-2336714)
[»] scaffold0391 (7 HSPs)
scaffold0391 (1-146)||(1174-1318)
scaffold0391 (40-146)||(3092-3197)
scaffold0391 (150-210)||(1384-1444)
scaffold0391 (1-44)||(1759-1802)
scaffold0391 (161-209)||(3275-3323)
scaffold0391 (100-146)||(1464-1510)
scaffold0391 (162-206)||(1591-1635)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-146)||(5303-5447)
scaffold0078 (3-102)||(4972-5070)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-141)||(17524-17663)
[»] chr4 (85 HSPs)
chr4 (1-146)||(36629186-36629327)
chr4 (1-145)||(39404346-39404488)
chr4 (2-146)||(20826166-20826306)
chr4 (1-120)||(52884860-52884977)
chr4 (1-104)||(36572007-36572109)
chr4 (13-144)||(44620608-44620738)
chr4 (2-146)||(49076515-49076660)
chr4 (1-146)||(54108864-54109003)
chr4 (25-144)||(44621374-44621492)
chr4 (1-140)||(2741026-2741161)
chr4 (16-127)||(3341093-3341203)
chr4 (13-118)||(43174480-43174585)
chr4 (1-102)||(1731713-1731813)
chr4 (1-102)||(25483326-25483426)
chr4 (1-102)||(34646715-34646815)
chr4 (1-86)||(49880166-49880250)
chr4 (1-125)||(22028027-22028150)
chr4 (1-100)||(41707530-41707628)
chr4 (2-146)||(3244518-3244658)
chr4 (2-120)||(10246319-10246436)
chr4 (13-99)||(20825829-20825914)
chr4 (25-126)||(45489421-45489522)
chr4 (1-99)||(52884688-52884785)
chr4 (1-102)||(4955383-4955483)
chr4 (1-102)||(10245910-10246009)
chr4 (1-102)||(22183330-22183430)
chr4 (1-102)||(36608727-36608827)
chr4 (1-85)||(50630821-50630904)
chr4 (2-86)||(55933191-55933274)
chr4 (1-99)||(2740693-2740790)
chr4 (1-95)||(54017661-54017754)
chr4 (1-102)||(50002416-50002516)
chr4 (1-97)||(3340802-3340897)
chr4 (1-97)||(39404013-39404108)
chr4 (2-86)||(41370363-41370446)
chr4 (1-86)||(49302910-49302996)
chr4 (1-101)||(51768126-51768225)
chr4 (1-102)||(54017768-54017870)
chr4 (1-102)||(54936190-54936286)
chr4 (25-102)||(44620286-44620362)
chr4 (150-210)||(2740893-2740953)
chr4 (3-112)||(16888884-16888993)
chr4 (1-99)||(39792926-39793023)
chr4 (1-83)||(44620362-44620443)
chr4 (9-86)||(50459727-50459803)
chr4 (150-210)||(20826040-20826100)
chr4 (23-102)||(4390189-4390267)
chr4 (1-146)||(18932815-18932967)
chr4 (2-104)||(22028436-22028539)
chr4 (22-100)||(3700357-3700434)
chr4 (25-110)||(44620926-44621011)
chr4 (20-82)||(54343086-54343147)
chr4 (17-99)||(54741260-54741341)
chr4 (17-94)||(40067041-40067118)
chr4 (1-77)||(45496820-45496895)
chr4 (1-83)||(44621011-44621092)
chr4 (1-86)||(760195-760279)
chr4 (9-90)||(6975530-6975610)
chr4 (150-210)||(16889430-16889490)
chr4 (150-210)||(23817573-23817633)
chr4 (150-210)||(44621202-44621262)
chr4 (151-206)||(50627668-50627723)
chr4 (1-99)||(32941189-32941286)
chr4 (160-210)||(39404221-39404271)
chr4 (2-102)||(16889603-16889703)
chr4 (149-210)||(31691355-31691416)
chr4 (1-98)||(49076897-49076992)
chr4 (9-97)||(34004658-34004744)
chr4 (146-210)||(43174345-43174409)
chr4 (150-210)||(54108739-54108798)
chr4 (1-136)||(15841050-15841183)
chr4 (39-102)||(19504695-19504757)
chr4 (1-40)||(31691203-31691242)
chr4 (50-100)||(45050593-45050643)
chr4 (15-77)||(54108551-54108612)
chr4 (150-210)||(41370560-41370618)
chr4 (3-102)||(11348396-11348494)
chr4 (1-99)||(28034222-28034319)
chr4 (1-51)||(43827480-43827530)
chr4 (1-71)||(48111764-48111833)
chr4 (113-146)||(41707340-41707373)
chr4 (1-37)||(3271841-3271877)
chr4 (1-45)||(18879852-18879896)
chr4 (1-49)||(34544148-34544196)
chr4 (150-210)||(45489608-45489668)
[»] scaffold0702 (2 HSPs)
scaffold0702 (1-102)||(582-682)
scaffold0702 (21-146)||(230-351)
[»] scaffold0504 (1 HSPs)
scaffold0504 (14-102)||(10192-10279)
[»] scaffold0113 (1 HSPs)
scaffold0113 (64-140)||(39792-39866)
[»] scaffold0027 (1 HSPs)
scaffold0027 (2-102)||(47350-47449)


Alignment Details
Target: chr3 (Bit Score: 118; Significance: 2e-60; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 32462626 - 32462771
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||| ||||| ||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  32462626 cttaaagcaataggtttatggatcatcttacttataaggtgttcaaccttttactctttcattcgatgtgggacatataactcacacttgtacacaacaa 32462725  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  32462726 cactccccctcaagtgtgagtccatcaattcatcatgctccccctt 32462771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 15773281 - 15773140
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||||||||| | ||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  15773281 ttaaggcaatgagcttatgagtcctcttacttataagatgttcaac-ttttactcttttattcgatgtgggacatataactcacacttgcacacaacaac 15773183  T
Q  102 actccccctcaagtgtgagcccatcaattcatcatgctccccc 144  Q
    ||||||||||||||||||| |||||| || ||| |||||||||    
T  15773182 actccccctcaagtgtgagtccatcactttatcgtgctccccc 15773140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 37990707 - 37990848
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||| ||| ||| |||||| |||||||| |||||||||||||| |||||||||||||    
T  37990707 cttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacattt-actattttatccgatgtggaacatataactcacacttgtacacaacaa 37990805  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctcccc 143  Q
    ||||||||||||| |||||| ||||||||||||||||| ||||    
T  37990806 cactccccctcaactgtgagtccatcaattcatcatgcccccc 37990848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 22304659 - 22304517
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||||||||| |||||| |||  || | |||    
T  22304659 cttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacc-tttactattttatccgatgtgggacatatagctcacacttg--caaaccaa 22304563  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||    
T  22304562 cactccccctcaagtgtgagtccatctattcatcatgctccccctt 22304517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 54017896 - 54018027
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctca 112  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||| ||| ||||||||| |||||||||||    
T  54017896 ggtttatgagtcctcttacttataaggtgttcaaccttt-actcttttatccgatgtaggacatataactcacacttgcacacaacaatactccccctca 54017994  T
Q  113 agtgtgagcccatcaattcatcatgctccccct 145  Q
    |||||||| |||||  ||||||||| |||||||    
T  54017995 agtgtgagtccatcttttcatcatgttccccct 54018027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 42342158 - 42342296
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||| ||||||||||||||||||  || ||| ||| |||||||||| |||||||| |||||| | ||||| ||| |||||||||    
T  42342158 cttaaggcaatgagtttatgagtcctcttacttataaggcattgaacattt-actcttttatccgatgtggaacatatgaatcacacttgcacacaacaa 42342256  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  42342257 cactccccctcaagtgtgagtccatcaattcatcatgctc 42342296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32462968 - 32463070
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  32462968 cttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacatataactcacacttgtacacaacaa 32463067  T
Q  101 cac 103  Q
    |||    
T  32463068 cac 32463070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 35946612 - 35946515
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  35946612 cttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacc-tttactgttttatccgatgtgggacatataactcacacttgtacacaaca 35946515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 45901803 - 45901702
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  45901803 ttaaggccatgagtttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgatgtgggacatataactcacacttgtacacaacaac 45901704  T
Q  102 ac 103  Q
    ||    
T  45901703 ac 45901702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 29644649 - 29644792
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| ||| |||||| ||    
T  29644649 cttaagacaatgggtttatgggttctcttacttataaggtgttcaacc-tttactctttaatccgatgtgggacatataactcacacttgcacacaaaaa 29644747  T
Q  101 cact-ccccctcaagtgtgagcccatcaattcatcatgctccccc 144  Q
    || | |||||||||||||||   ||||| || ||| |||||||||    
T  29644748 cattcccccctcaagtgtgacttcatcactttatcgtgctccccc 29644792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 41359833 - 41359972
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||| |||||||||    |||||||||| ||| |||||||||    
T  41359833 cttaaggcaatgggtttatgggtcctcttacttataaggtattcaacc-tttactattgtatccgatgtggg----ataactcacacttgcacacaacaa 41359927  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||| |||||||||  |||| ||||||||||||| |||||    
T  41359928 cactcccccttaagtgtgag-tcatctattcatcatgctctccctt 41359972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 43346859 - 43346960
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||| |||||| ||||||  |||||||||||||||||||||| |||||||||||||    
T  43346859 cttaaggcaatgagtttatgggttctcttacttataaggtgttcaacc-tttactattttatctgatgtgggacatataactcacacttgtacacaacaa 43346957  T
Q  101 cac 103  Q
    |||    
T  43346958 cac 43346960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 29644970 - 29645070
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||| ||| ||| |||||||||    
T  29644970 cttaagacaatgggtttatgggtcctcttacttataaggtgtttaacc-tttactcttttatccgatgtgggacatataacttacacttgcacacaacaa 29645068  T
Q  101 ca 102  Q
    ||    
T  29645069 ca 29645070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 52634765 - 52634666
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||||    
T  52634765 cttaaggcaatgggtttatgggtc-tcttacttataaggcgttcaaccttt-actgttttatccgatgtgggacatataactcacacttgtacacaacaa 52634668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 21832411 - 21832549
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| ||| ||||||| ||||||||||||||||||||||||||| |||||| || ||| | ||||||||||||||||||||| ||| ||   | ||    
T  21832411 cttaaggctatgagtttatgagtcctcttacttataaggtgttcaacc-tttacttttctatccaatgtgggacatataactcacacttgcac---ataa 21832506  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctcccc 143  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||    
T  21832507 cactccgcctcaagtgtgagtccatctattcatcatgctcccc 21832549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 3135141 - 3135282
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaac-a 99  Q
    |||| |||| ||||||||||||| || ||||||||||||||||||| | |||||| |||||| ||||||||||||||||||||||  ||||||||||| |    
T  3135141 cttatggcagtgggtttatgggttcttttacttataaggtgttcaa-catttactattttatccgatgtgggacatataactcac--ttgtacacaacaa 3135237  T
Q  100 acactccccctcaagtgtgagcccatcaattcatcatgctccccct 145  Q
    |||||| || |||||||||||  |||||||||||| ||||||||||    
T  3135238 acactcaccatcaagtgtgag-tcatcaattcatcgtgctccccct 3135282  T

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Target: chr3; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 33803320 - 33803417
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| ||||||||||||||||||||||| ||| ||||||||    
T  33803320 cttaatgcaatgggtttatgggtcctcttacttatatggtgttcaacc-tttactattttatccgatgtgggacatataactcacaattgcacacaaca 33803417  T

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Target: chr3; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 42342456 - 42342556
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| |||||| ||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||||||||||||||| ||| |||||||||    
T  42342456 cttaagacaatggatttatgggtcctcttacttataaggtgttgaacc-tttactcttttatcggatgtgggacatataactcacacttgcacacaacaa 42342554  T
Q  101 ca 102  Q
    ||    
T  42342555 ca 42342556  T

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Target: chr3; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 22304023 - 22304143
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||       |||||| ||| ||||||  |||||||||||||||||||||| |||||||||||||    
T  22304023 cttaaggcaatgggtttatgggtccgcttacttataag-------accttt-actattttatctgatgtgggacatataactcacacttgtacacaacaa 22304114  T
Q  101 cactccccctcaagtgtgagcccatcaat 129  Q
    || || |||||||||||||| ||||||||    
T  22304115 cattctccctcaagtgtgagtccatcaat 22304143  T

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Target: chr3; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 37991045 - 37991146
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| ||| |||||| |||||||||||||||||||||||||||| |||||| |||||| | ||||| ||||||||||||||| |||||||||||||    
T  37991045 cttaaggcgatgagtttataggtcctcttacttataaggtgttcaacc-tttactattttatccaatgtgagacatataactcacacttgtacacaacaa 37991143  T
Q  101 cac 103  Q
    |||    
T  37991144 cac 37991146  T

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Target: chr3; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1634382 - 1634483
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| |||||||||||||||||||||||||||||| ||||| ||||||||| | || ||| ||||||||||||||||||||||| ||| ||||| |||    
T  1634382 cttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataactcacacttgcacacagcaa 1634481  T
Q  101 ca 102  Q
    ||    
T  1634482 ca 1634483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12114630 - 12114730
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || ||| |||||||||| |||||||| ||| ||| |||||||||    
T  12114630 cttaagacaatgggtttatgggtcctcttacttataaggtgttcaacc-tttacttttctatccgatgtgggatatataacttacacttgcacacaacaa 12114728  T
Q  101 ca 102  Q
    ||    
T  12114729 ca 12114730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15772944 - 15772844
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||| | ||||||||||||| |||| |||||||||||||||||| ||| |||| ||||    
T  15772944 cttaaagcaatgagtttatgggtcctcttacttataaggtgttcaa-catttactcttttatccgatatgggacatataactcacacttgcacacgacaa 15772846  T
Q  101 ca 102  Q
    ||    
T  15772845 ca 15772844  T

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Target: chr3; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 39935024 - 39935104
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactc 83  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||    
T  39935024 ttaaggcaatgggtttatggatcctcttacttataaggtgttcaacc-tttactcttttatccgatgtaggacatataactc 39935104  T

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Target: chr3; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 4823745 - 4823622
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| |||||||||||||| ||||||||||||||| || |||||||| |||||| ||||||| ||| ||||||||||| |||  || | |||    
T  4823745 cttaaggcaatgagtttatgggtcctcctacttataaggtgtttaa-cttttactattttatccgatgtgagacttataactcacacttg--caaaccaa 4823649  T
Q  101 cactccccctcaagtgtgagcccatca 127  Q
    |||||||| ||||||||||| ||||||    
T  4823648 cactccccttcaagtgtgagtccatca 4823622  T

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Target: chr3; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 25739499 - 25739593
Alignment:
Q  7 gcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||| ||||||||||||||||||||||| | |||||||| ||||||| |||||| ||||||||||||||||||||||| ||| |||||||||||    
T  25739499 gcaatgagtttatgggtcctcttacttatatgatgttcaac-ttttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 25739593  T

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Target: chr3; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 25755477 - 25755383
Alignment:
Q  8 caatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacac 103  Q
    |||||| |||||| ||||||||||||||||||| |||||||||| ||||||||||  |||||| ||||||||||||||| ||||||||||||||||    
T  25755477 caatggatttatgagtcctcttacttataaggtattcaaccttt-actcttttatctgatgtgagacatataactcacacttgtacacaacaacac 25755383  T

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Target: chr3; HSP #28
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 45395722 - 45395819
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||| |||||||||||||| ||||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||| ||| ||| |||||||||    
T  45395722 ttaagacaatgggtttatggatcctcttacttataacgtgtttaaccttt-actcttttattcgatgtgggatatataacttacacttgcacacaacaa 45395819  T

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Target: chr3; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 9240239 - 9240104
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| | ||||||||  | ||| |||||||| |||||||||||||| ||| ||   ||||    
T  9240239 cttaaggtaatggatttatgggtcctcttacttataaggtgttc-agcttttacttctctatccgatgtggaacatataactcacacttgcac---acaa 9240144  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
    |||||| ||||||||||||| ||||| |||| | ||||||    
T  9240143 cactcctcctcaagtgtgagtccatccattcgttatgctc 9240104  T

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Target: chr3; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 31190091 - 31190007
Alignment:
Q  17 tatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||| |||||||||||    
T  31190091 tatgggtcctctaacttataaggtgttcaaccttt-actcttttatccgatgtgggacatatcactcacacttgcacacaacaaca 31190007  T

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Target: chr3; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 32589793 - 32589694
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||   ||||||||||||| ||||||| ||| |||||||||    
T  32589793 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-tttattattttatcttatgtgggacatat-actcacacttgcacacaacaa 32589696  T

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Target: chr3; HSP #32
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 11662041 - 11661902
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||| |||||||| | ||||| |||| ||||||||||||||||| |||||||||| | ||||||| ||| ||||||||| ||  | |||||||    
T  11662041 cttaaggcaattggtttatgaggcctctcacttttaaggtgttcaaccttt-actcttttatccaatgtggggcatttaactcacacttacatacaacaa 11661943  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctcc 141  Q
    |||||||||  ||||||||| |||||| || ||| ||||||    
T  11661942 cactcccccaaaagtgtgagtccatcactttatcgtgctcc 11661902  T

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Target: chr3; HSP #33
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 49336764 - 49336855
Alignment:
Q  10 atgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| || ||| ||||||| ||||| ||||||||| |||||||||||||||    
T  49336764 atgggtttatgggtcctcttacttataaggtggtcaacc-tttacttttctatccgatgtgagacatgtaactcacacttgtacacaacaaca 49336855  T

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Target: chr3; HSP #34
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 22304301 - 22304208
Alignment:
Q  36 aaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattca 132  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| | ||  ||||||||||||||||||||||| |||||||||||    
T  22304301 aaggtgttcaaccttt-actattttatccgatgtgggacatataactcacacttgcaaac--caacactccccctcaagtgtgagtccatcaattca 22304208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 39389160 - 39389076
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||| ||||||||||||||||||||||| || |||||||||||||| |||||| |||||| |||||| ||||||||||||||||    
T  39389160 cttaagacaatgggtttatgggtcctcttagttttaaggtgttcaacc-tttactattttatccgatgtaggacatataactcaca 39389076  T

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Target: chr3; HSP #36
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 54018278 - 54018366
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||| |||||  |||||||||||||||| ||| ||| |||||||    
T  54018278 ggtttatgggtcctcttacttataaggtgttcaatc-tttactcttttatccgatgcaggacatataactcacacttgcacataacaaca 54018366  T

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Target: chr3; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 39914341 - 39914242
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    |||||||| | |||||||||||||||||| ||||||||||||||||| | |||| ||||||  |||||| ||||||||||||||| ||| ||||||||||    
T  39914341 ttaaggcattaggtttatgggtcctcttatttataaggtgttcaacc-tctactgttttatctgatgtgagacatataactcacacttgcacacaacaac 39914243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 51886645 - 51886567
Alignment:
Q  7 gcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||| ||||||||||||||||||||||| | ||||||||| |||||| |||||||||||||| |||||||||||||||    
T  51886645 gcaatgagtttatgggtcctcttacttatatgatgttcaacc-tttactattttattcgatgtgagacatataactcaca 51886567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 8327994 - 8327897
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    ||||||||| |  |||||||||| |||||||||||||| | |||| ||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  8327994 cttaaggcattacgtttatgggttctcttacttataagatattcatccttt-actcttttatccgatgtgggacatataactcacacttgcacacaaca 8327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 3135522 - 3135629
Alignment:
Q  1 cttaaggcaatgggtttat--gggtcctcttac-----ttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtac 93  Q
    |||||||||||||||||||  ||||||||||||     | ||||||||||||| |||||||||||||||  || ||||||||||||||||||| ||||||    
T  3135522 cttaaggcaatgggtttatgggggtcctcttactaatataataaggtgttcaa-cttttactcttttatctgaggtgggacatataactcacacttgtac 3135620  T
Q  94 acaacaaca 102  Q
    |||||||||    
T  3135621 acaacaaca 3135629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 42584890 - 42584970
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataact 82  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||| | ||||||||| ||| |||||||||||||||||||    
T  42584890 cttaagacaattggtttatggatcctcttacttataaggtgttcaatc-tttactcttctatccgatgtgggacatataact 42584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 53118043 - 53118142
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||| ||  |||||| |||||||||||||||||||||| |||||||||| |||| ||| |||||||||||||| |||  ||||||||    
T  53118043 cttaaggcaatgggttt-tgaatcctctcacttataaggtgttcaaccttt-actcttttatccgatatggaacatataactcacacttgcccacaacaa 53118140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 33175747 - 33175829
Alignment:
Q  16 ttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||| |||||||||||||||||||||||| |||||| || |||  |||||| ||||||||||||||| ||||||||||||    
T  33175747 ttatgggttctcttacttataaggtgttcaacc-tttacttttctatctgatgtgagacatataactcacacttgtacacaaca 33175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 50612534 - 50612604
Alignment:
Q  15 tttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||| ||||||||||||||||||||||||| | |||||| |||||| |||||||||||||||||||||||    
T  50612534 tttatgagtcctcttacttataaggtgttcaatc-tttactattttatccgatgtgggacatataactcaca 50612604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 53577454 - 53577354
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||  |||||||| ||| |||| || |||| |||||||||||| ||| |||||| ||||||| ||||||||||||||| ||| |||||||||    
T  53577454 cttaaggcaatatgtttatggatccacttatttttaagatgttcaaccttt-actgttttatccgatgtgtgacatataactcacacttgcacacaacaa 53577356  T
Q  101 ca 102  Q
    ||    
T  53577355 ca 53577354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 7767382 - 7767464
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactca 84  Q
    |||||| ||||||||||||| ||||||||| |||||| |||| ||||| |||||| || ||| |||||||||||||||||||||    
T  7767382 cttaagacaatgggtttatgagtcctcttagttataaagtgtccaacc-tttacttttctatccgatgtgggacatataactca 7767464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 11661602 - 11661525
Alignment:
Q  24 cctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||||||||||||| |||| |||| || ||| |||||| ||||||||||||||||||||||| ||||||||| |||||    
T  11661602 cctcttacttataagatgtttaaccgtt-actattttatccgatgtgggacatataactcacacttgtacacaccaaca 11661525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33362361 - 33362411
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt 51  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  33362361 cttaaggaaatgggtttatgggtcctcttacttataaggtattcaaccttt 33362411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 39336297 - 39336392
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaa 97  Q
    ||||| |||||| |||||||| |||||| |||||||| |||||||||||   ||| || ||| ||||||||||||||||||||||| ||| ||||||    
T  39336297 cttaaagcaatgagtttatggatcctctcacttataaagtgttcaacctccaact-ttctatccgatgtgggacatataactcacacttgcacacaa 39336392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 41359656 - 41359720
Alignment:
Q  146 tgctttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||||||||||||||||||| || ||| |||||| |||||||||| || |||||||||||    
T  41359656 tgctttgtaccgctgttgctgctttatgcgcagacggactggctgcctcgatcttacccttcgtc 41359720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 54018092 - 54018152
Alignment:
Q  149 tttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgt 209  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  54018092 tttgtaccgccattgctgctttctgcgcaaacggaccggctgcctcgatcgcacccttcgt 54018152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 2300000 - 2299930
Alignment:
Q  68 gtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgct 139  Q
    |||||||||||||| |||| ||| ||||||||| | ||||||||||||||||| ||||||||| ||||||||    
T  2300000 gtgggacatataacccacacttgcacacaacaata-tccccctcaagtgtgagtccatcaatttatcatgct 2299930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 43346706 - 43346640
Alignment:
Q  35 taaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| |||||||| ||| |||||||||||    
T  43346706 taaggtgttcaaccttt-actattttatccgatgtgggacatacaactcacacttgcacacaacaaca 43346640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44160612 - 44160662
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt 51  Q
    |||||| |||||||||||||| |||||||| ||||||||||||||||||||    
T  44160612 cttaagacaatgggtttatggatcctcttatttataaggtgttcaaccttt 44160662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 25739330 - 25739379
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcg 199  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  25739330 ttgtaccgccgttgttgctttctgcgcaaacggaccggctgcctcggtcg 25739379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 32462794 - 32462855
Alignment:
Q  149 tttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    |||||||||| |||||||||||||| ||||||| |||| ||||  |||||||||||||||||    
T  32462794 tttgtaccgccgttgctgctttctgcgcaaacgaaccgactgctccggtcgtacccttcgtc 32462855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 37726577 - 37726510
Alignment:
Q  18 atgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||| |||||||||||||||||| |||||| ||| ||| |||||| ||||||| |||||||||||||||    
T  37726577 atggatcctcttacttataaggtattcaacattt-actattttatccgatgtgagacatataactcaca 37726510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 33803157 - 33803207
Alignment:
Q  160 gttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||||| || |||||||||| ||||||||| |||||||||||||||    
T  33803157 gttgctgctttatgcgcaaacggactggctgcctcagtcgtacccttcgtc 33803207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 3135349 - 3135406
Alignment:
Q  149 tttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    |||||||||| |||||||||||||| | |||||||||  |||||||| ||||||||||    
T  3135349 tttgtaccgccgttgctgctttctgcgtaaacggaccaactgcctcgttcgtaccctt 3135406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22303727 - 22303759
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttactt 33  Q
    |||||||||||||||||||||||||||||||||    
T  22303727 cttaaggcaatgggtttatgggtcctcttactt 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46546393 - 46546441
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 49  Q
    ||||||||||||||||||||| | |||| |||||||| |||||||||||    
T  46546393 cttaaggcaatgggtttatggattctctaacttataaagtgttcaacct 46546441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 52635030 - 52634990
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtg 41  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  52635030 cttaaggcaatgagtttatgggtcctcttatttataaggtg 52634990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 3384347 - 3384417
Alignment:
Q  14 gtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcac 85  Q
    |||||||||||||||| ||||||| ||||| |||| | |||| ||||||   ||||||||||||||||||||    
T  3384347 gtttatgggtcctcttccttataaagtgtttaacc-tatactgttttatcatatgtgggacatataactcac 3384417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 22304457 - 22304398
Alignment:
Q  150 ttgtaccgctgttgct-gctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    |||||| ||||||||| |||||||| ||||   |||||||||||||||||||||||||||||    
T  22304457 ttgtacagctgttgcttgctttctgcgcaac--gaccggctgcctcggtcgtacccttcgtc 22304398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 37990878 - 37990928
Alignment:
Q  156 cgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    ||| ||||||| |||||| ||||||| ||||||||||||| ||||||||||    
T  37990878 cgccgttgctggtttctgcgcaaacgaaccggctgcctcgatcgtaccctt 37990928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 47964586 - 47964683
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    ||||||||||| |||||||||||||||| |||||||  | |||||||| |  ||  || ||| ||||| |||||||| |||||||| ||| ||||||||    
T  47964586 cttaaggcaataggtttatgggtcctctcacttatatagcgttcaacc-tccacatttctatccgatgcgggacatacaactcacacttgcacacaaca 47964683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 12747882 - 12747956
Alignment:
Q  64 cgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
    ||||||||||||||||||||||| ||| ||||||||| |   || |||||| ||||| || | ||||||||||||||    
T  12747882 cgatgtgggacatataactcacacttgcacacaacaata--tcctctcaagcgtgagtccgtaaattcatcatgctc 12747956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 53577616 - 53577568
Alignment:
Q  161 ttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||||||| |||| | ||||||| |||||||||||||||||||||    
T  53577616 ttgctgctttctgcgcaa-ctgaccggcggcctcggtcgtacccttcgtc 53577568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12749259 - 12749211
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 49  Q
    ||||| ||||| |||||||||||||||  |||||||| |||||||||||    
T  12749259 cttaatgcaattggtttatgggtcctcacacttataaagtgttcaacct 12749211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 52634933 - 52634889
Alignment:
Q  96 aacaacactccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
    |||||||||| |||||||||||||| | ||||||||||| |||||    
T  52634933 aacaacactctccctcaagtgtgagtcaatcaattcatcgtgctc 52634889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 3e-56; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 16108153 - 16108012
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  16108153 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacattt-actcttttatctgatgtggaacatataactcacacttgtacacaacaa 16108055  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctcccc 143  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  16108054 cactccccctcaagtgtgagtccatcaattcatcatgctcccc 16108012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 16454997 - 16454778
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  16454997 cttaaggcaataggtttatgggtcctattacttataaggtgttcaaccttt-actcttttatctgatgtgggacacataactcacatttgtacacaacaa 16454899  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt-----------gctttgtaccgctgttgctgctttctgtgcaaacggaccggct 189  Q
    ||||||||||||| |||||  ||||||||||| |||||||||||||            ||||||||||  |||| ||||||||| ||||||||||||| |    
T  16454898 cactccccctcaactgtgactccatcaattcagcatgctcccccttcaagcggaagctctttgtaccgtcgttgttgctttctgcgcaaacggaccggtt 16454799  T
Q  190 gcctcggtcgtacccttcgtc 210  Q
     ||||||||||||||||||||    
T  16454798 acctcggtcgtacccttcgtc 16454778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 2578511 - 2578647
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||| || |||||||||||||||||||| |||||||||||||    
T  2578511 cttaaggctatgggtttatgggtcctcttacttataaagtgttcaaccttt-actcttttatccg-tgtgggacatataactcacacttgtacacaacaa 2578608  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgct 139  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  2578609 cactccccctcaagtgtgagtccatctattcatcatgct 2578647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 29519010 - 29518869
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| |||  || | |||    
T  29519010 cttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtgggacatataactcacacttg--caaaccaa 29518914  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccct 145  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  29518913 cactccccctcaagtgtgagtccatcaattcatcgtgctccccct 29518869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 10074059 - 10074200
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| || ||| |||||||||| |||||||||||  ||| ||   ||||    
T  10074059 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaa-cgtttacttttctatccgatgtgggatatataactcacccttgcac---acaa 10074154  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||    
T  10074155 cactccccctcaagtgcgagtctatcaattcatcatgctccccctt 10074200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 2378216 - 2378075
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| |||  || | |||    
T  2378216 cttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtgggacatataactcacacttg--caaaccaa 2378120  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    ||||||||| ||| |||||| ||||  |||||||||||||||||||    
T  2378119 cactccccc-caaatgtgagtccatttattcatcatgctccccctt 2378075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 2579203 - 2579308
Alignment:
Q  31 cttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaatt 130  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| |||    
T  2579203 cttataaggtgttcaac-ttttactcttttatccgatgtgggacatataactaacacttgtacacaacaacactccccctcaagtgtgagtccatctatt 2579301  T
Q  131 catcatg 137  Q
    |||||||    
T  2579302 catcatg 2579308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 2377844 - 2377744
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||| ||||||||    
T  2377844 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactcttttaaccgatgtgggacatataactcacacttgtgcacaacaa 2377746  T
Q  101 ca 102  Q
    ||    
T  2377745 ca 2377744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 16454665 - 16454565
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||||| |||||||||| |||||||||||||    
T  16454665 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaa-cttttattcttttatctgatgtgggacacataactcacacttgtacacaacaa 16454567  T
Q  101 ca 102  Q
    ||    
T  16454566 ca 16454565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 10074431 - 10074560
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || ||| ||||||||||| | ||||||||| ||| ||   ||||    
T  10074431 cttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacc-tttacttttctatccgatgtgggacctctaactcacacttgcac---acaa 10074526  T
Q  101 cactccccctcaagtgtgagcccatcaattcatc 134  Q
    |||||||||| ||||||||| |||||||||||||    
T  10074527 cactcccccttaagtgtgagtccatcaattcatc 10074560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2579940 - 2580040
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  2579940 cttaaggctgtgggtttatgggtcctcttacttataatgtgttcaaccttt-actcttttatccgatgtgggacatataactcacacttgcacacaacaa 2580038  T
Q  101 ca 102  Q
    ||    
T  2580039 ca 2580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 3409747 - 3409627
Alignment:
Q  4 aaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacac 103  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||  ||||||| |||||||||||||| |||  || | ||||||    
T  3409747 aaggcaatgggtttatgggtcctcttacttataagatgttcaa-cttttactattttatctgatgtggtacatataactcacacttg--caaaccaacac 3409651  T
Q  104 tccccctcaagtgtgagcccatca 127  Q
    ||||||||||||||||| ||||||    
T  3409650 tccccctcaagtgtgagtccatca 3409627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 32460648 - 32460750
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||  | | ||||||||    
T  32460648 cttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacc-tttactattttatacgatgtgggacatataactcacacctttgcacaacaa 32460746  T
Q  101 cact 104  Q
    ||||    
T  32460747 cact 32460750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 16107768 - 16107668
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| |||||| |||||| |||||||  |||||||||||||| |||||||||||||    
T  16107768 cttaaggcaatgggtttatgagtcctcttacttataaggtgtttaacc-tttacttttttatccgatgtgacacatataactcacacttgtacacaacaa 16107670  T
Q  101 ca 102  Q
    ||    
T  16107669 ca 16107668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 29518593 - 29518509
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  29518593 cttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtgggacatataactcaca 29518509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32741269 - 32741185
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  32741269 cttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtgggacatataactcaca 32741185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3409349 - 3409265
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||  ||||||||||||||||||||||    
T  3409349 cttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacc-tttactattttatctgatgtgggacatataactcaca 3409265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3415548 - 3415464
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||  ||||||||||||||||||||||    
T  3415548 cttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacc-tttactattttatgtgatgtgggacatataactcaca 3415464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 9062417 - 9062517
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||| ||||||| ||||||||||||||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||||| ||    
T  9062417 cttaagacaatgagtttatgagtcctcttacttataagatgttcaaccttt-actattttatccgatgtgggacatataactcacatttatacacaataa 9062515  T
Q  101 ca 102  Q
    ||    
T  9062516 ca 9062517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 10073684 - 10073823
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||    ||||| | ||||||||||||||||||| ||| ||| ||   ||||    
T  10073684 cttaagccaatgagtttatggatcctcttacttataaggtgttcaaccttt---acttttctccgatgtgggacatataactaacacttgcac---acaa 10073777  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    ||| ||| || ||||||||| |||||||||||||||| ||||||||    
T  10073778 caccccctcttaagtgtgagtccatcaattcatcatgttccccctt 10073823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35210294 - 35210210
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||| ||||||| |||||||||||||||    
T  35210294 cttaaggcaatggttttatgggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtgagacatataactcaca 35210210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 5832108 - 5832194
Alignment:
Q  15 tttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| ||| |||| ||||||||||    
T  5832108 tttatgggtcctcttacttataaggtgttcaacc-tttactcttttatccaatgtgggacatataacttacacttgtgcacaacaaca 5832194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 6071222 - 6071085
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| |||||||| || ||| |||||||| |||||||||||   ||| || ||||| ||||||||||||||||||||| ||| |||||||||    
T  6071222 cttaaggcaatgagtttatggatcatctcacttataaagtgttcaacctcc-acttttctattcaatgtgggacatataactcacacttgcacacaacaa 6071124  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
      || |||||||| |||||| |||||||||||||||||||    
T  6071123 -tcttcccctcaaatgtgagtccatcaattcatcatgctc 6071085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 593777 - 593861
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||| | |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  593777 cttaaggcagtcggtttatgagtcctcttacttataaggtgttcaacc-tttactcttttatccgatgtgggacatacaactcaca 593861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1950253 - 1950353
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||| | | ||||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| || ||| ||||||    
T  1950253 cttaaggcattagatttatggctcctcttacttgtaaggtgttcaaccttt-actcttttatccgatgtgggacatataactcacacttatacgcaacaa 1950351  T
Q  101 ca 102  Q
    ||    
T  1950352 ca 1950353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3058316 - 3058236
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataact 82  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  3058316 cttaaggcaatgggtttatggatcctcatacttataaggtgttcaacc-tttactattttatccgatgtgggacatataact 3058236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 14748406 - 14748490
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  14748406 cttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacc-tttactattttatccgatgtgggacatataactcaca 14748490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26544139 - 26544055
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||| |||||| |||||| |||||||||||||||||||||||    
T  26544139 cttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacc-tttactattttatccgatgtgggacatataactcaca 26544055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 2579560 - 2579701
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||||| ||||||||||||||||| | | ||| |||||| |||| | |||||||||||||||||||||||  ||     |||||    
T  2579560 cttaaggcaatgagtttatgggccctcttacttataaggtatccgacc-tttacttttttgtccgatgtgggacatataactcacacctg---ctaacaa 2579655  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    ||||| |||||||||||||| || || |||||||||| ||||||||    
T  2579656 cactctccctcaagtgtgagtccgtctattcatcatggtccccctt 2579701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 2843645 - 2843544
Alignment:
Q  1 cttaaggcaatgggtttatggg-tcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||| |||||| | |||||| |||||||  |||||||||||||| |||| |||||||    
T  2843645 cttaaggcaatgagtttatggggtcctcttacttataaggtgttcaa-cttttattattttatccgatgtgaaacatataactcacaattgtgcacaaca 2843547  T
Q  100 aca 102  Q
    |||    
T  2843546 aca 2843544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1127450 - 1127366
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||| |||||| |||||  |||||||||| ||||||||||||    
T  1127450 cttaaggtaatgggtttatgagtcctcttacttataaggtgttcaacc-tttactattttacccgatgtgggatatataactcaca 1127366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 6999864 - 6999964
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||| || |||||||| ||||||||| |||||||||||||| |||||||| |||||| |||||| |||||||||||||||| || ||||||| ||    
T  6999864 cttaaggcagtgagtttatggatcctcttacatataaggtgttcaa-cttttacttttttatccgatgtaggacatataactcacacttatacacaataa 6999962  T
Q  101 ca 102  Q
    ||    
T  6999963 ca 6999964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1846838 - 1846754
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| |||||| |||||| ||||||| |||||| || |||||    
T  1846838 cttaaggcaatggatttatgggtgctcttacttataaggtgttcaacc-tttactattttatccgatgtgagacatagaattcaca 1846754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 10911655 - 10911558
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||   | ||||||  ||||| |||||||||||||||| ||| | ||||||    
T  10911655 ttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactttttttatctgatgtaggacatataactcacacttgcatacaaca 10911558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 2578726 - 2578790
Alignment:
Q  146 tgctttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||| ||| ||||||||||||||  ||| |||||||||||||||||||||||||||||||    
T  2578726 tgctttgtaacgccgttgctgctttctgcccaagcggaccggctgcctcggtcgtacccttcgtc 2578790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 16107947 - 16107883
Alignment:
Q  146 tgctttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||||||| ||||||||||||||  |||| |||||||||||||||||| |||||||||||    
T  16107947 tgctttgtaccgccgttgctgctttctgcacaaatggaccggctgcctcggtcatacccttcgtc 16107883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 2579384 - 2579447
Alignment:
Q  147 gctttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    |||||||||||| |||||||||||||| ||||  ||||||||||||||||||||||| ||||||    
T  2579384 gctttgtaccgccgttgctgctttctgcgcaagtggaccggctgcctcggtcgtaccgttcgtc 2579447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 8482016 - 8481888
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||| ||| ||| | |||||| |||||||||||   ||| || |||  ||||||| |||||||||||||| ||| |||||||||    
T  8482016 cttaaggcaatgagtttatgagtcatctcatttataaagtgttcaacctcc-acttttatatctgatgtgg-acatataactcacacttgcacacaacaa 8481919  T
Q  101 cactccccctcaagtgtgagcccatcaattca 132  Q
      |||||||||||||||||| |||||||||||    
T  8481918 t-ctccccctcaagtgtgagtccatcaattca 8481888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 33606007 - 33605938
Alignment:
Q  60 tattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattca 132  Q
    ||||||||||||||||||||||| ||||||| ||   ||| |||||||||||||||||||| |||||||||||    
T  33606007 tattcgatgtgggacatataacttacatttgcac---acatcactccccctcaagtgtgagtccatcaattca 33605938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 2578903 - 2579016
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||| |||| |||||||| |||||||| ||||||||| |||||| ||| ||| |||||| ||||| ||||||||||| ||||| |||  |   ||||    
T  2578903 cttaaggtaatgagtttatggatcctcttatttataaggtattcaacattt-act-ttttatccgatgagggacatataaatcacacttgctc---acaa 2578997  T
Q  101 cactccccctcaagtgtga 119  Q
    |||||||||||||||||||    
T  2578998 cactccccctcaagtgtga 2579016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 5958672 - 5958771
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||| ||||| ||||||| || |||||| ||||||||||||||||| |||||| |||||| ||||||   |||||||||||||| ||| |||| |||||    
T  5958672 ttaagacaatgagtttatgagttctcttatttataaggtgttcaacc-tttactgttttatccgatgtaacacatataactcacaattgcacaccacaac 5958770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 2579768 - 2579827
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgt 209  Q
    |||||||||  ||||||||||||| ||||||| || ||||||||||||||||||||||||    
T  2579768 ttgtaccgcaattgctgctttctgcgcaaacgaactggctgcctcggtcgtacccttcgt 2579827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 2579017 - 2579065
Alignment:
Q  162 tgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  2579017 tgctgctttatgtgcaaactgactggctgcctcggtcgtacccttcgtc 2579065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 10073886 - 10073945
Alignment:
Q  149 tttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgt 209  Q
    ||||||||| ||||||| ||||||  ||||||||||||||||||||||||||||| |||||    
T  10073886 tttgtaccg-tgttgctactttctacgcaaacggaccggctgcctcggtcgtacctttcgt 10073945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 2975641 - 2975501
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacat-ataactcacatttgtacacaacaa 100  Q
    ||||| ||| || |||||||||| |||| |||||||||||||||| | |||||| || |||| |||||||||||| || ||| ||| ||  ||   ||||    
T  2975641 ttaagacaaaggatttatgggtcatcttgcttataaggtgttcaa-catttacttttctatttgatgtgggacataattacttacacttaaac---acaa 2975546  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    ||||||||| ||||||||||  |||| |||||||||| ||||||||    
T  2975545 cactccccc-caagtgtgagtgcatctattcatcatgttccccctt 2975501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 14789279 - 14789322
Alignment:
Q  8 caatgggtttatgggtcctcttacttataaggtgttcaaccttt 51  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  14789279 caattggtttatgggtcctcttacttgtaaggtgttcaaccttt 14789322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 12092201 - 12092238
Alignment:
Q  103 ctccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
    |||||||||||||||||| |||||||||||||||||||    
T  12092201 ctccccctcaagtgtgagtccatcaattcatcatgctc 12092238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12092550 - 12092647
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||||||| |||||||| |||||| |||||||| ||| |||||| |  ||| || ||| ||||||||||||| |||| |||  ||| ||||||||    
T  12092550 cttaaggcaatgagtttatggatcctctcacttataaagtgctcaacc-tccacttttctatccgatgtgggacatctaacacacccttgcacacaaca 12092647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 35210551 - 35210498
Alignment:
Q  18 atgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtggg 72  Q
    ||||||||||||||||| ||||| ||||||| |||||| |||||| |||||||||    
T  35210551 atgggtcctcttacttacaaggtattcaacc-tttactattttatccgatgtggg 35210498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 35210485 - 35210448
Alignment:
Q  98 caacactccccctcaagtgtgagcccatcaattcatca 135  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  35210485 caacactccccctcaagtgtgagtccatcaatccatca 35210448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 109; Significance: 5e-55; HSPs: 3)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 5867 - 5724
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| ||||||||||||||| ||| |||||||||    
T  5867 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt-actattttatccgatgtgcgacatataactcacacttgcacacaacaa 5769  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccct 145  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  5768 cactccccctcaagtgtgagtccatcaattcatcttgctccccct 5724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 5473 - 5386
Alignment:
Q  14 gtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||||||| ||||||||||||||||||||||||| |||||| |||||| |||||| |||||||||||||||| ||| |||||||||||    
T  5473 gtttatgggccctcttacttataaggtgttcaacc-tttactattttatccgatgtaggacatataactcacacttgcacacaacaaca 5386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 5653 - 5597
Alignment:
Q  154 accgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||| |||||||||||||| |||||||||||| |||||| | ||  ||||||||||    
T  5653 accgccgttgctgctttctgcgcaaacggaccgactgcctggatcacacccttcgtc 5597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 7554115 - 7553972
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| |||||||||    
T  7554115 cttaaggctatgggtttatggatcctcttacttataaggtgttcaaccttt-actattttatccgatgtgggacatataactcacacttgcacacaacaa 7554017  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccct 145  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  7554016 cactccccctcaagtgtgagtccatcaattcatcgtgctccccct 7553972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 30244360 - 30244220
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||    
T  30244360 cttaaggcaatgggtttatgagtcctcttacttataaggtcttcaaccttt-actcttttatccgatgtgggacatataactcacacttgtacacaacaa 30244262  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccc 142  Q
    ||||||||||||||||||||  |||| | |||||||||||||    
T  30244261 cactccccctcaagtgtgagttcatctagtcatcatgctccc 30244220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 30245167 - 30245023
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| |||||||||||||    
T  30245167 cttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaaccttt-actcttttatccgatgtggaacatataactcacacttgtacacaacaa 30245069  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||||||||| ||| ||||| | |||||||||||||||||    
T  30245068 cactccccctcaagtgcgagtccatctaatcatcatgctccccctt 30245023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 22566730 - 22566872
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||| | |||||||    
T  22566730 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactcttttatccgatgtgggacatattactcacacttgcatacaacaa 22566828  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccc 144  Q
    ||||||||||||| ||| || | |||| || ||| |||||||||    
T  22566829 cactccccctcaaatgttagtctatcactttatcgtgctccccc 22566872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 45434726 - 45434584
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| ||| |||||||||||||    
T  45434726 cttaaggcagtaagtttatgggtcctcttacttataaggtgttcaaccttt-acttttttatccgatgtgggacatataacttacacttgtacacaacaa 45434628  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    ||  ||||| |||||||||| || ||||||||||||||||||||||    
T  45434627 ca--cccccccaagtgtgagtccttcaattcatcatgctccccctt 45434584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7517670 - 7517570
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  7517670 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactcttttatccgatgtgggacatataactcacacttgcacacaacaa 7517572  T
Q  101 ca 102  Q
    ||    
T  7517571 ca 7517570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 14681600 - 14681460
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||| ||||||  |||||||||||||||||| ||| ||| | ||  |||    
T  14681600 cttaagacaatgggtttatgggccctcttacttacaaggtgttcaaccttt-actattttatctgatgtgggacatataacttacacttgcaaac--caa 14681504  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccc 144  Q
    |||||||||||||||||||| ||||| |||||||||||||||||    
T  14681503 cactccccctcaagtgtgagtccatctattcatcatgctccccc 14681460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 1085684 - 1085786
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||| ||||||||||||||||||||||| ||| |||||||||    
T  1085684 cttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacc-tttactattttatccgatgtgggacatataactcacacttgcacacaacaa 1085782  T
Q  101 cact 104  Q
    ||||    
T  1085783 cact 1085786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 30244771 - 30244649
Alignment:
Q  21 ggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgag 120  Q
    |||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  30244771 ggtcctcttatttataaggtgttcaaccttt-actcttttatccaatgtgggacatataactcacacttgcacacaacaacactccccctcaagtgtgag 30244673  T
Q  121 cccatc-aattcatcatgctcccc 143  Q
     |||||   |||||||||||||||    
T  30244672 tccatctttttcatcatgctcccc 30244649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 30255412 - 30255311
Alignment:
Q  18 atgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgt 117  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||||||||    
T  30255412 atgggccctcttacttataaggtgttcaaccttt-actcttttatccgatgtgggacatataacgcacacttgcacacaacaacactccccctcaagtgt 30255314  T
Q  118 gag 120  Q
    |||    
T  30255313 gag 30255311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 37533078 - 37533201
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| | ||||||||||||||||||||| |||  || | |||    
T  37533078 cttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacc-tttactattttatccaatgtgggacatataactcacacttg--caaaccaa 37533174  T
Q  101 cactccccctcaagtgtgagcccatca 127  Q
    |||||||||||||| ||||| ||||||    
T  37533175 cactccccctcaagcgtgagtccatca 37533201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 40094842 - 40094942
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| | |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  40094842 cttaagacgatgggtttatgggtcctcttacttataaggtgttgaaccttt-actcttttattcgatgtgagacatataactcacacttgcacacaacaa 40094940  T
Q  101 ca 102  Q
    ||    
T  40094941 ca 40094942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 24177524 - 24177425
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| | ||| ||||||||||    
T  24177524 ttaaggcaatgggtttatgggtccgcttacttataaggtgttcagcc-tttactcttttatccgatgtgggacatataactcatacttgcacacaacaac 24177426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 30245567 - 30245468
Alignment:
Q  18 atgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgt 117  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  30245567 atgggccctcttacttataaggtgttcaaccttt-actcttttatctgatgtgggacatataactcacacttgcacacaacaacagtccccctcaagtgt 30245469  T

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Target: chr7; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 23445 - 23545
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || ||| |||||||| |||||||||||||| ||| |||||||||    
T  23445 cttaaggcaataggtttatgggtcctcttacttataaggtgttcaacc-tttactattgtatccgatgtggaacatataactcacaattgcacacaacaa 23543  T
Q  101 ca 102  Q
    ||    
T  23544 ca 23545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34218102 - 34218202
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||||| ||| ||| |||||| ||||||| |||||||||||||||||||||||||||||    
T  34218102 cttaagacaatgggtttatgagtcctctcacttataaggtgttcaacattt-acttttttatccgatgtgagacatataactcacatttgtacacaacaa 34218200  T
Q  101 ca 102  Q
    ||    
T  34218201 ca 34218202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 45433331 - 45433231
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||| ||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  45433331 cttaaggcaataggtttatgagttctcttacttataaggtgttcaacc-tttactcttttatccgatgtggatcatataactcacacttgtacacaacaa 45433233  T
Q  101 ca 102  Q
    ||    
T  45433232 ca 45433231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36939801 - 36939900
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||||| ||| ||| |||||    
T  36939801 cttaaggcaatggatttatgggtcctcttacttataaggtgttcaa-cttttactattttatacgatttgggacatataactcacacttgcacagaacaa 36939899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11845281 - 11845183
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||| |||||||| |||||||||||||  |||| ||||||||    
T  11845281 cttaaggcaatggatttatgggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtggaacatataactcac--ttgtgcacaacaa 11845185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 1085316 - 1085463
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacat-ataactcacatttgtacacaaca 99  Q
    |||||||||||| |||||||||| ||||||||||| || ||||||| |||||||| |||||| |||| |||||||| | |||||||| ||| ||||||||    
T  1085316 cttaaggcaatgagtttatgggttctcttacttatgagttgttcaa-cttttactattttatccgatatgggacataaaaactcacacttgcacacaaca 1085414  T
Q  100 acactccccctcaagtgtga--gcccatcaattcatcatgctccccctt 146  Q
    ||||||||| ||||||||||  | |||||  ||||||||||| ||||||    
T  1085415 acactccccttcaagtgtgagtgtccatcttttcatcatgctacccctt 1085463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 16569286 - 16569186
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||| ||||||| ||||||||||||||| ||| | |||||||    
T  16569286 cttaaggcaatgggtttatgggtcctcttacttataaggtattcaacc-tttactgttctatccgatgtgagacatataactcacacttgcatacaacaa 16569188  T
Q  101 ca 102  Q
    ||    
T  16569187 ca 16569186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 16596376 - 16596476
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||| ||||||| ||||||||||||||| ||| | |||||||    
T  16596376 cttaaggcaatgggtttatgggtcctcttacttataaggtattcaacc-tttactgttctatccgatgtgagacatataactcacacttgcatacaacaa 16596474  T
Q  101 ca 102  Q
    ||    
T  16596475 ca 16596476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 22567107 - 22567206
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||| ||||||| ||| | |||||||    
T  22567107 cttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacc-tttactcttttatccgatgt-ggacatattactcacacttgcatacaacaa 22567204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 41910662 - 41910762
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||||||||||||||||||| | ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||| ||  |||||||||    
T  41910662 cttaagccaatgggtttatgggtcctctcagttataaggtattcaaccttt-actcttttatccgatgtgggacatataactcacacttacacacaacaa 41910760  T
Q  101 ca 102  Q
    ||    
T  41910761 ca 41910762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 28301613 - 28301708
Alignment:
Q  3 taaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||| || ||| ||||||| ||||||||||||||| ||| ||||||||    
T  28301613 taaggcaatgggtttatgggtcctcttacttataaggtgttc-agcttttacttttctatccgatgtgagacatataactcacacttgcacacaaca 28301708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 40230359 - 40230454
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaa 97  Q
    |||||| | ||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||| ||| ||| ||||||    
T  40230359 cttaagactatgggtttatgggtcctcttacttataagatgttcaa-cttttacttttttattcgatgtgggacatataacttacacttgcacacaa 40230454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 24838769 - 24838870
Alignment:
Q  1 cttaaggcaatgggtttatgggtcct-cttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||| ||| |||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| || |||||||||    
T  24838769 cttaagacaacgggtttatggatccttcttacttataaggtgttcaaccttt-actcttttattcgatgtgagacatataacttacacttatacacaaca 24838867  T
Q  100 aca 102  Q
    |||    
T  24838868 aca 24838870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 47129185 - 47129084
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||| || |||||||||||||||||||||||||||||  |||||||| |||||| |||||| ||||||| ||||||||||||||| |||| ||||||||    
T  47129185 cttaaagcgatgggtttatgggtcctcttacttataagaggttcaacc-tttactattttatccgatgtgagacatataactcacacttgtgcacaacaa 47129087  T
Q  101 cac 103  Q
    |||    
T  47129086 cac 47129084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 29157655 - 29157571
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| |||||| || ||||||||||||||||||||    
T  29157655 cttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacc-tttactattttatccggtgtgggacatataactcaca 29157571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 30032657 - 30032557
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| || ||||||||| | |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  30032657 cttaaggctataggtttatggatactcttacttataaggtgttcaacactt-actcttttattcgatgtgggacatataactcacacatgtacgcaacaa 30032559  T
Q  101 ca 102  Q
    ||    
T  30032558 ca 30032557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 37533432 - 37533516
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||| |||| | ||||||||||||||    
T  37533432 cttaaggcaatggatttatgggtcctcttacttataaggtgttcaacc-tttactattttattcaatgtagaacatataactcaca 37533516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 45754805 - 45754706
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||| | |||||| |||||| |||||| |||||||||||||||| |||||||||||||    
T  45754805 cttaaggctatgggtttatgagtcatcttacttataaggtgttcaa-catttactattttatccgatgt-ggacatataactcacacttgtacacaacaa 45754708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 6054650 - 6054555
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaa 97  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | |||||| |||||| ||||||| ||||||||||| ||| |||| |||||    
T  6054650 cttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaa-catttactattttatccgatgtgagacatataactaacacttgtccacaa 6054555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 48243352 - 48243416
Alignment:
Q  146 tgctttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48243352 tgctttgtaccgccgttgctgctttctgcgcaaacggaccggctgcctcggtcgtacccttcgtc 48243416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 48243218 - 48243289
Alignment:
Q  75 atataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||| | ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  48243218 atataactcagacttgtacacaacaacactccccctcaagtgtgaatccatcaattcatcatgctccccctt 48243289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 19122821 - 19122740
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactca 84  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| |||||| |||||| |||||| ||||||||||||||    
T  19122821 cttaaggcaatggatttatgagtcctcttacttataaggtgttcaacc-tttactattttatccgatgt-ggacatataactca 19122740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8128509 - 8128606
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||  |||||||||||||||||||||| |||||||||||||||| |||| | || ||| |||| |||||||||||||||||| ||| ||||||||    
T  8128509 cttaaggttatgggtttatgggtcctcttacatataaggtgttcaacc-tttatttttctatccgatatgggacatataactcacacttgcacacaaca 8128606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 36109007 - 36109084
Alignment:
Q  23 tcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||| || |||||||||||| ||| ||||||||||    
T  36109007 tcctcttacttataaggtgttcaaccttt-actcttttatccgatgtgagaaatataactcacacttgcacacaacaac 36109084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 118377 - 118469
Alignment:
Q  9 aatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||| || |||  |||||||||||||||||| ||| ||| |||||||||||    
T  118377 aatgggtttatggatcctcttacttattaggtgttcaacc-tttacttttctatctgatgtgggacatataacttacacttgcacacaacaaca 118469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 36534864 - 36534952
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||| ||| ||||||||||||| | ||| ||| |||||||||||    
T  36534864 ggtttatgggtcctcttacttataaggtgttcaacc-tctactgttttatccgaggtgggacatataagttacacttgcacacaacaaca 36534952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 36623050 - 36622950
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||| ||||||| ||||| |||||||||  |||| ||||||| ||| |||||| ||||||||||||||||||||||| ||| |||||| ||    
T  36623050 cttaaggcaatggatttatggatcctcctacttataaaatgtttaaccttt-actattttatccgatgtgggacatataactcacacttgcacacaataa 36622952  T
Q  101 ca 102  Q
    ||    
T  36622951 ca 36622950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 43241585 - 43241485
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||  ||||||| ||||| ||||||||||||||||||||| |||| | |||||| |||||||| |||||||||||||| ||| |||||||||    
T  43241585 cttaagtcaataagtttatgagtccttttacttataaggtgttcaacc-tttatttttttatccgatgtggaacatataactcacacttgcacacaacaa 43241487  T
Q  101 ca 102  Q
    ||    
T  43241486 ca 43241485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 40094664 - 40094723
Alignment:
Q  151 tgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  40094664 tgtaccgccgttgctactttctgcgcaaacggaccggctgcctcggtcgtacccttcgtc 40094723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 20599403 - 20599304
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||||||||| ||||||  ||||||||| |||||| ||||| | ||||| ||| |||||| |||| |||||||||||||||||| || || ||||||||    
T  20599403 ttaaggcaatgagtttatatgtcctcttatttataaagtgtttatccttt-acttttttatccgatatgggacatataactcacacttatagacaacaac 20599305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 44361541 - 44361615
Alignment:
Q  10 atgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||| || ||||||||| |||||||||||| |||||||||||||| ||||||| |||||||| ||||||    
T  44361541 atgggtttatggatcatcttactta-aaggtgttcaac-ttttactcttttatccgatgtgagacatatatctcaca 44361615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 41854710 - 41854625
Alignment:
Q  15 tttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||| |||| |||| |||||||||||||||||| |||||||||||| | |||||||||||||||||||| | ||| |||||| ||||    
T  41854710 tttataggtcatcttgcttataaggtgttcaacc-tttactcttttact-gatgtgggacatataactcatacttgcacacaaaaaca 41854625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 40094502 - 40094602
Alignment:
Q  41 gttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
    ||||||||||| ||||||||||  ||||| |||||||||||||||| ||| ||   |||||||||| ||| ||||||||| ||||| |||||||| ||||    
T  40094502 gttcaaccttt-actcttttatctgatgttggacatataactcacacttgcac---acaacactcctcctaaagtgtgagtccatctattcatcacgctc 40094597  T
Q  141 cccct 145  Q
     ||||    
T  40094598 tccct 40094602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 45754980 - 45754918
Alignment:
Q  146 tgctttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcg 208  Q
    ||||||||||||   |||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  45754980 tgctttgtaccgtctttgctgctttctgtacaaacggactggctgcctcggtcatacccttcg 45754918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9901733 - 9901635
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||| |||||||| |||||| || |||||| |||||||||||| ||| |||||| |||||||| |||||||||||||| || ||||||| ||    
T  9901733 cttaagacaatgagtttatggatcctct-acgtataagatgttcaaccttt-actgttttatccgatgtgg-acatataactcacacttatacacaataa 9901637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 4124218 - 4124293
Alignment:
Q  64 cgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
    |||||| |||||| ||| ||||| ||| ||||||||| ||| | | |||||||||||||||||||||||||||||||    
T  4124218 cgatgtaggacatgtaattcacagttgcacacaacaa-acttcacatcaagtgtgagcccatcaattcatcatgctc 4124293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30253582 - 30253534
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 49  Q
    |||||||||||| |||||||||| |||||||||||||||| ||||||||    
T  30253582 cttaaggcaatgagtttatgggttctcttacttataaggtcttcaacct 30253534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 36967345 - 36967397
Alignment:
Q  50 tttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||| |||||| ||||||| ||||||||||||||| |||||||||||||||    
T  36967345 tttacttttttatccgatgtgagacatataactcacacttgtacacaacaaca 36967397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 45433497 - 45433445
Alignment:
Q  154 accgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    ||||| ||||||||||| || ||||||||||| ||||||||||||||||||||    
T  45433497 accgccgttgctgctttatgcgcaaacggaccagctgcctcggtcgtaccctt 45433445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28300321 - 28300366
Alignment:
Q  1 cttaaggcaatgggtttat-gggtcctcttacttataaggtgttca 45  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  28300321 cttaaggcaatgggtttatggggttctcttacttataaggtgttca 28300366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 30244612 - 30244559
Alignment:
Q  153 taccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    ||||| |||||||||| |||| |||||||||||| |||||||| ||||||||||    
T  30244612 taccgatgttgctgctctctgcgcaaacggaccgactgcctcgatcgtaccctt 30244559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 28300474 - 28300533
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||  |||||||||||||| ||||  |||||| |||||||||||||||||||||||    
T  28300474 ttgtaccgtcgttgctgctttctgcgcaat-ggaccgactgcctcggtcgtacccttcgtc 28300533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 30245418 - 30245362
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    ||||| ||| ||||||||| |||| ||||||||| ||||||||||| ||||||||||    
T  30245418 ttgtatcgccgttgctgctctctgcgcaaacggatcggctgcctcgatcgtaccctt 30245362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 37345933 - 37345867
Alignment:
Q  75 atataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctccccc 144  Q
    |||||||||||| ||| ||   |||||||||||| |||||||||||  |||||||||||| |||||||||    
T  37345933 atataactcacacttgcac---acaacactccccttcaagtgtgagttcatcaattcatcgtgctccccc 37345867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 28300365 - 28300410
Alignment:
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    ||||||| |||||||||||| ||||| |||||||||||||| ||||    
T  28300365 cactccctctcaagtgtgagtccatctattcatcatgctcctcctt 28300410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 1085528 - 1085568
Alignment:
Q  167 ctttctgtgcaaacggaccggctgcctcggtcgtacccttc 207  Q
    ||||||| ||||| |||||||||||||||||| ||||||||    
T  1085528 ctttctgcgcaaatggaccggctgcctcggtcatacccttc 1085568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 2e-51; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 26074702 - 26074565
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| |||||||||||||| |||||||||| ||    
T  26074702 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt-actcttttatccgatatggaacatataactcacacttgtacacaaaaa 26074604  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgct 139  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  26074603 cactccccctcaagtgtgagtccatcaattgatcatgct 26074565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 26074850 - 26074994
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| |||| ||||||||||||||| ||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||    
T  26074850 cttaagacaataggtttatgggtcctcctacttatattgtgttcaaccttt-actcttttatccgatgtgggacatataactcacacttgtacacaacaa 26074948  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||    
T  26074949 cactccccctcaagtgtgagtccatcaattcatcaagctccccctt 26074994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 13415828 - 13415971
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||| ||| ||||||||     
T  13415828 cttaaggtaataggtttatgggtcctcttacttataaggtgttcaacc-tttactaatttatccgatgtgggacatataactcacacttgcacacaacag 13415926  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||| ||||||||||||||| ||||| ||||| |||||||||||||    
T  13415927 cact-cccctcaagtgtgagtccatctattcagcatgctccccctt 13415971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 3295086 - 3295306
Alignment:
Q  4 aaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttg--tacacaacaac 101  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||||| ||||||| |||   ||||||||||    
T  3295086 aaggcaatgggtttatgggtcttcttacttataaggtgttcaacc-tttactattttatccgatgtgggacatat-actcacacttgcacacacaacaac 3295183  T
Q  102 actccccctcaagtgtgagcccatcaattcatcatgctccccctt--------gct---------ttgtaccgctgttgctgctttctgtgcaaacggac 184  Q
    ||||||||||||||||||| |||||| ||  || |||||||||||        |||         ||||| ||| |||||||||||||| ||||||||||    
T  3295184 actccccctcaagtgtgagtccatcactttttcgtgctcccccttaagcggaagctcttacttgcttgtatcgccgttgctgctttctgcgcaaacggac 3295283  T
Q  185 cggctgcctcggtcgtacccttc 207  Q
    || ||||||||||||||||||||    
T  3295284 cgactgcctcggtcgtacccttc 3295306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 26075230 - 26075330
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||| |||||||||||||    
T  26075230 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactcttttatccgatgtgagacatataaatcacacttgtacacaacaa 26075328  T
Q  101 ca 102  Q
    ||    
T  26075329 ca 26075330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 6500912 - 6500771
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| |||||| |||||| |||||||||||||||| |||  || | |||    
T  6500912 cttaaggcaatgagtttatgggtccttttatttataaggtgttcaacc-tttactattttatccgatgt-ggacatataactcacacttg--caaaccaa 6500817  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||||    
T  6500816 cactccccatcaagtgtgagtccatctattcatcatgctccccctt 6500771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 6224286 - 6224186
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  6224286 cttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacc-tttactcttttatccgaagtgggacatataactcacacttgtacacaacaa 6224188  T
Q  101 ca 102  Q
    ||    
T  6224187 ca 6224186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 24489274 - 24489412
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||  ||||||| |||||||||| |||||||| || || |||  |||||||||||||||||||||| ||| ||||||       
T  24489274 cttaaggcaatgggtttatgggt--tcttactaataaggtgtttaacctttt-cttttctatctgatgtgggacatataactcacacttgaacacaa--- 24489367  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccct 145  Q
    |||||||||||||||||||| |||||||||||||||||| |||||    
T  24489368 cactccccctcaagtgtgagtccatcaattcatcatgctacccct 24489412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 40296386 - 40296483
Alignment:
Q  4 aaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| ||| ||||| |||||    
T  40296386 aaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttt-ctattttatccgatgtgggacatataactcacacttgcacacaccaaca 40296483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15370189 - 15370089
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||  ||| |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||    
T  15370189 cttaaggctgtggatttatgggtcctcttacttataagatgttcaaccttt-actattttattcgatgtgggacatataactcacacttgcacacaacaa 15370091  T
Q  101 ca 102  Q
    ||    
T  15370090 ca 15370089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 18603188 - 18603272
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  ||||||||||||||||||||||    
T  18603188 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactattttatctgatgtgggacatataactcaca 18603272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 26074214 - 26074329
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||| |||||| |||||| ||||||| ||||||||||||||| ||| ||   ||||    
T  26074214 cttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacc-tttacttttttatccgatgtgtgacatataactcacacttgcac---acaa 26074309  T
Q  101 cactccccctcaagtgtgag 120  Q
    ||||||||||||||||||||    
T  26074310 cactccccctcaagtgtgag 26074329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34753093 - 34753193
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| || ||| | ||||||||||||||||| |||||||||||||||||    
T  34753093 cttaaggcaatcggtttatgggtcttcttacttataaggtgttcaa-cttttacttttctatccaatgtgggacatataacttacatttgtacacaacaa 34753191  T
Q  101 ca 102  Q
    ||    
T  34753192 ca 34753193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 41170724 - 41170640
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||||||||||    
T  41170724 cttaaggcaatgggtttatgggtcctcttacttataagatgttcaacc-tttactattttatccgatgtgggacatataactcaca 41170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 624283 - 624148
Alignment:
Q  4 aaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacac 103  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||| |||||| |||||| | ||||||||||||||||||||| |||  || | ||||||    
T  624283 aaggctatgggtttatgggtcatcttacttataacgtgttcaacc-tttactattttatacaatgtgggacatataactcacacttg--caaaccaacac 624187  T
Q  104 tccccctcaagtgtgagcccatcaattcatcatgctcccc 143  Q
    | ||||||||||||||  ||||| ||||||||||||||||    
T  624186 ttcccctcaagtgtga-tccatctattcatcatgctcccc 624148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 11417045 - 11417143
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||| |||||||| |||||||||||||  ||| |||||||||    
T  11417045 cttaaggcaatgggtttatggatcctcttacttataaggtgttcaacc-tttactattttatccgatgtggaacatataactcac--ttgcacacaacaa 11417141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 36492288 - 36492385
Alignment:
Q  4 aaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| | |||||||||    
T  36492288 aaggtaatgtgtttattggtcctcttacttataaggtgttcaaccttt-actcttttatccgatgtgggacatataactcacacttgcaaacaacaaca 36492385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 299579 - 299479
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| |||  ||||||||    
T  299579 cttaaggctatgagtttatgggtcatcttacttataaggtgttcaacc-tttactgttttatccgatgtgggacatataactcacacttgcgcacaacaa 299481  T
Q  101 ca 102  Q
    ||    
T  299480 ca 299479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9498722 - 9498810
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttg 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||  |||||| |||||||||||||||||||    
T  9498722 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactattctatctgatgtgagacatataactcacatttg 9498810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25328025 - 25327925
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||| ||  |||||||||    
T  25328025 cttaaggcattaggtttatgggtcctcttacttataaggtgttcaa-cttttactgttttatccgatgtaggacatataactcacacttagacacaacaa 25327927  T
Q  101 ca 102  Q
    ||    
T  25327926 ca 25327925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32487483 - 32487400
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  32487483 cttaaggcaatgggtttatgggtcctcttacttat-aggtgttcaacc-tttactattttatccgatgtgggacatataactcaca 32487400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36568635 - 36568732
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||| || ||| ||||||||||||||||||||||| ||| ||||||||    
T  36568635 cttaaggcaatgggtttacgggtcatctcacttataaggtgttcaa-cttttacttttctatccgatgtgggacatataactcacacttgcacacaaca 36568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 27502104 - 27502188
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||| |||||| |||||| | |||||||||||||||||||||    
T  27502104 cttaaggcaataggtttatgggtcctcttacttataaggtgtttaacc-tttactattttatccaatgtgggacatataactcaca 27502188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 42405664 - 42405764
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||| | |||||||| ||||| |||||| ||||||||||||||||| ||| |||||| |||||| |||||||||||||||| |||||||||||||    
T  42405664 cttaaggcattaggtttatgagtccttttacttgtaaggtgttcaaccttt-actattttatccgatgttggacatataactcacacttgtacacaacaa 42405762  T
Q  101 ca 102  Q
    ||    
T  42405763 ca 42405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 31509710 - 31509576
Alignment:
Q  4 aaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacac 103  Q
    ||||||||| ||||||| ||||||| |||||||| ||| |||||||   ||| || ||| ||||||| ||||||||||||||| ||| |||||||||  |    
T  31509710 aaggcaatgagtttatgagtcctctcacttataaagtgctcaacctcc-acttttctatccgatgtgagacatataactcacacttgcacacaacaat-c 31509613  T
Q  104 tccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
    || |||||||||||||| |||||||||||||||||||    
T  31509612 tctccctcaagtgtgagtccatcaattcatcatgctc 31509576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 35150096 - 35150002
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaa 97  Q
    |||||| |||||| |||||||||| |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||| ||| ||||||    
T  35150096 cttaagacaatggatttatgggtc-tcttacttataaggtgttcaaccttg-actcttttatccgatgtgggacatataactcacacttgcacacaa 35150002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3295412 - 3295509
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||| |||||| ||||||| ||  |||||||||    
T  3295412 cttaaggcaattggtttatgggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtggaacatat-actcacacttccacacaacaa 3295509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 1028597 - 1028682
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||| || ||| ||||||||||||||||||||||| ||||||||||||    
T  1028597 ggtttatgggtcctcttacttataaagtgttcatccttt-acttttctatccgatgtgggacatataactcacacttgtacacaaca 1028682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 41632872 - 41632775
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| || ||| ||||||| ||||||||||| ||| ||| ||||||||    
T  41632872 cttaaagcattgggtttatgggtcctcttacttataaggtgttcaacc-tttacttttctatccgatgtgagacatataacttacacttgcacacaaca 41632775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6500540 - 6500457
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||| |||||| |||||| |||||| ||||||||||||||||    
T  6500540 cttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaacc-tttactattttatccgatgt-ggacatataactcaca 6500457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12662720 - 12662820
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| |||||| |||||||||  ||||||||||||  |||||||||||| ||| |||||| ||||||||||||||||||||||| ||| |||||||||    
T  12662720 cttaagacaatggatttatgggttttcttacttataaaatgttcaaccttt-actattttatccgatgtgggacatataactcacacttgcacacaacaa 12662818  T
Q  101 ca 102  Q
    ||    
T  12662819 ca 12662820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 42508702 - 42508604
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||| |||||||||||||| || |||| |||| |||||| || ||| |||||||||| |||||| ||||| |||||||||||||    
T  42508702 cttaaggcaatgggtttatgagtcctcttacttattagatgtttaacc-tttacttttctatccgatgtgggatatataattcacacttgtacacaacaa 42508604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 35914934 - 35914839
Alignment:
Q  6 ggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||| |||| ||||| ||||||||||||  |||||||||||| |||||||||| ||||||| ||||||||||||| | || ||||||||||||    
T  35914934 ggcaatggatttacgggtcttcttacttataaaatgttcaaccttt-actcttttatccgatgtgtgacatataactcatacttatacacaacaaca 35914839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 35167909 - 35168006
Alignment:
Q  4 aaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||| | |||||||||| || |||||||||||||||||||| |||||||||||||  |||||| || | |||||||| | |||||||||||||||    
T  35167909 aaggcaatagatttatgggtcatcctacttataaggtgttcaacc-tttactcttttatctgatgtgagatacataactcatacttgtacacaacaaca 35168006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 35150789 - 35150736
Alignment:
Q  50 tttactcttttattcgatgtgggacatataactcacatttgtacacaacaacac 103  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  35150789 tttactcttttattcgatgtgggacatataactcacacttgcacacaacaacac 35150736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 35151080 - 35151027
Alignment:
Q  50 tttactcttttattcgatgtgggacatataactcacatttgtacacaacaacac 103  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  35151080 tttactcttttattcgatgtgggacatataactcacacttgcacacaacaacac 35151027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 39309764 - 39309677
Alignment:
Q  10 atgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||||||| |||||||| |||||| ||||||||| ||| || ||||||| ||||||||||||||||||||| | ||||||||||||    
T  39309764 atgggtttatgg-tcctcttatttataatgtgttcaacattt-acccttttatccgatgtgggacatataactcatacttgtacacaaca 39309677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 26075058 - 26075114
Alignment:
Q  154 accgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  26075058 accgccgttgctgctttctgcgcaaacagaccggctgcctcggtcgtacccttcgtc 26075114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 26074398 - 26074324
Alignment:
Q  11 tgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||||||||||||||||||||||||||| | |||| | || |||  ||||||||||||||||||||||    
T  26074398 tgggtttatgggtcctcttacttataaggtgttcaatc-tttagttttctatctgatgtgggacatataactcaca 26074324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33747861 - 33747783
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataa 80  Q
    |||||||||||| |||||||| ||||||||||||||| || || |||| |||||| |||||| |||||||||||||||||    
T  33747861 cttaaggcaatgagtttatggatcctcttacttataaagtatttaacc-tttactattttatccgatgtgggacatataa 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 36521964 - 36522093
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||| |||||||||||||||| | ||| |  |||||||||||   ||| || |||  |||||||||||||||||||||| |||  |   ||||    
T  36521964 cttaaggcaattggtttatgggtcctctcatttaaagagtgttcaacctca-acttttctatctgatgtgggacatataactcacacttgcgc---acaa 36522059  T
Q  101 cactccccctcaagtgtgagcccatcaattcatc 134  Q
    ||||| |||||||||||||| |||||||||||||    
T  36522060 cactctccctcaagtgtgagtccatcaattcatc 36522093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 13416041 - 13416095
Alignment:
Q  154 accgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcg 208  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  13416041 accgccgttgctgctttctgcgcaaacggaccggttgcctcggtcgtacccttcg 13416095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15370492 - 15370446
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 47  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  15370492 cttaaggctatgggtttatgggtcctcttacttataaggtgttcaac 15370446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 301025 - 300949
Alignment:
Q  25 ctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||||||||||| |||||||||| ||| ||||||  ||||||||||||||||| |||| |||||||||| ||||    
T  301025 ctcttacttataaggtattcaaccttt-actgttttatctgatgtgggacatataacccacacttgtacacaaaaaca 300949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 25328195 - 25328139
Alignment:
Q  154 accgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||| ||||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  25328195 accgccgttgctgctttttgtgcaaacggaccggctgcctcgttcgtgcccttcgtc 25328139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 38427637 - 38427508
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| |||||| || ||||||||||| ||||||||| |||||||||||| ||| || ||| | ||||||||||||||||||||           ||||    
T  38427637 cttaagacaatggattaatgggtcctct-acttataagatgttcaaccttt-acttttctatccaatgtgggacatataactcac-----------acaa 38427551  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctcccc 143  Q
    |||||||||||||||||||| ||||| |||||| |||| ||||    
T  38427550 cactccccctcaagtgtgagtccatctattcatgatgcacccc 38427508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 41635260 - 41635359
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||| |||||| ||||||| |||||||| ||||||||||||||| | |||||||||||||  |||| |  |||||||||||| | || |||||||||||    
T  41635260 ttaagacaatggatttatggatcctcttatttataaggtgttcaa-catttactcttttatctgatgggaaacatataactcatacttatacacaacaac 41635358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 7768925 - 7768856
Alignment:
Q  16 ttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||| ||||||||||||||||||||| |||| | |||||| |||||| ||| ||||||||||||    
T  7768925 ttatgggtccttttacttataaggtgttcaacc-tttattattttatccgatgtaggatatataactcaca 7768856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 26900089 - 26900138
Alignment:
Q  53 actcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||||    
T  26900089 actcttttatctgatgtgggacatataactcaaatttgtacacaacaaca 26900138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29549323 - 29549407
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||| |||| ||||||||||| ||||||||||| |||||||| || |||||| ||||||  ||| ||| ||||||||||||||    
T  29549323 cttaaggtaatgtgtttatgggtcttcttacttatatggtgttcatcc-tttactattttatctgatatggaacatataactcaca 29549407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 5723876 - 5723943
Alignment:
Q  18 atgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||| ||||||| ||||| ||||||||| ||||| | |||||| |||||||||||||||||||||||    
T  5723876 atgggttctcttacatataatgtgttcaac-ttttattattttatccgatgtgggacatataactcaca 5723943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 15370338 - 15370286
Alignment:
Q  154 accgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    ||||| |||||| ||||||| |||||||||||||| |||||||||||||||||    
T  15370338 accgcggttgctactttctgcgcaaacggaccggcagcctcggtcgtaccctt 15370286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 15370426 - 15370370
Alignment:
Q  80 actcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcat 136  Q
    ||||||| ||| ||||||||||||||||||||||||||||| |||||  ||||||||    
T  15370426 actcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcat 15370370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 9498411 - 9498458
Alignment:
Q  99 aacactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  9498411 aacacaccccctcaagtgtgagtccatctattcatcatgctccccctt 9498458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26590978 - 26591028
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt 51  Q
    ||||||||| ||  ||||||| |||||||||||||||||||||||||||||    
T  26590978 cttaaggcattgaatttatggatcctcttacttataaggtgttcaaccttt 26591028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 624079 - 624022
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttc 207  Q
    ||||||||  |||||| ||||||| |||||||||||| ||||| ||||||||||||||    
T  624079 ttgtaccgtcgttgcttctttctgcgcaaacggaccgactgccacggtcgtacccttc 624022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2411097 - 2411013
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||  |||||||||| |||||||||| ||| ||||||| ||||||||  | ||| | |||| ||||||||||||||||    
T  2411097 cttaaggcaataagtttatgggttctcttacttacaagatgttcaa-cttttacttctctatccaatgtaggacatataactcaca 2411013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 146
Target Start/End: Original strand, 13785732 - 13785818
Alignment:
Q  57 ttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||| |||| |||||||||||||||||| ||  ||   ||||||||||||||||| |||||| | ||| |||||||||| | ||||||    
T  13785732 ttttatccgatttgggacatataactcacacttccac---acaacactccccctcaaatgtgagtctatctattcatcatgtttcccctt 13785818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 100
Target Start/End: Original strand, 36527214 - 36527249
Alignment:
Q  65 gatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||| |||||||||||||    
T  36527214 gatgtgggacatataactcacacttgtacacaacaa 36527249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 5660338 - 5660300
Alignment:
Q  52 tactcttttattcgatgtgggacatataactcacatttg 90  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  5660338 tactattttattcgatgtggaacatataactcacatttg 5660300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 623908 - 623824
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||| ||  |||||||| ||  ||||||| ||| ||||||||||||| ||| || ||| ||||||| |||||||||||||||    
T  623908 cttaaggctataagtttatggctcaacttacttgtaaagtgttcaaccttt-actattatatccgatgtgagacatataactcaca 623824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 6225104 - 6225052
Alignment:
Q  31 cttataaggtgttcaaccttttactcttttattcgatgtgggacatataactca 84  Q
    |||||||||||||||||| |||| ||||||||  ||||||||| ||||||||||    
T  6225104 cttataaggtgttcaacc-tttattcttttatctgatgtgggatatataactca 6225052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 6224442 - 6224398
Alignment:
Q  166 gctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||| || |||||||||||| ||||||| |||||||||||||||    
T  6224442 gctttttgcgcaaacggaccgactgcctcagtcgtacccttcgtc 6224398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 26074487 - 26074435
Alignment:
Q  154 accgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    ||||| |||||||||||||| |||||| |||  |||| |||||||||||||||    
T  26074487 accgccgttgctgctttctgcgcaaacagactagctgtctcggtcgtaccctt 26074435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 30359699 - 30359555
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||  ||||||||||| |||||||||||||||||||||||||| ||||||||||||||  |||||| ||||||||||||||| |||||||||||||    
T  30359699 cttaaggttatgggtttatgagtcctcttacttataaggtgttcaac-ttttactcttttatctgatgtgagacatataactcacacttgtacacaacaa 30359601  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    || ||||||||||||||||| ||||||||| |||||||||||||||    
T  30359600 cattccccctcaagtgtgagtccatcaatttatcatgctccccctt 30359555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 9309445 - 9309303
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  9309445 cttaaggcaatgagtttaagggtcctcttacttataaggtgttcaacattt-actcttttatccgatgtgggacatataactcacacttgcacacaacaa 9309347  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccc 144  Q
    ||||||||||||| |||||| |||||| || ||| |||||||||    
T  9309346 cactccccctcaattgtgagtccatcactttatcgtgctccccc 9309303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 34835298 - 34835160
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||  |||||||||||||||||||||  ||||||||| ||||    
T  34835298 ttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacc-tttactattttatcggatgtgggacatataactcacccttgtacacagcaac 34835200  T
Q  102 actccccctcaagtgtgagcccatcaattcatcatgctcccc 143  Q
    ||||||||||||  ||||| ||||||||||||||||| ||||    
T  34835199 actccccctcaa--gtgagtccatcaattcatcatgcccccc 34835160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 1013941 - 1014081
Alignment:
Q  3 taaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||||||||||||||| |||||||||||||||| |||||||||| ||||||| |||||| |||||||| |||||||||||||| ||| | ||  |||||    
T  1013941 taaggcaatgggtttattggtcctcttacttatagggtgttcaac-ttttactattttatccgatgtggaacatataactcacacttgcaaac--caaca 1014037  T
Q  103 ctccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||||||||||| ||||||||||||||| |||||||||    
T  1014038 ctccccctcaagtgtgagtccatcaattcatcatactccccctt 1014081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 34835564 - 34835427
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcg-atgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| ||||||  | | ||||||||||||||||||  ||||||||| |||    
T  34835564 ttaaggcaatgagtttatgggtcctcttacttataaggtgttaaaccttt-actattttatcgggacgtgggacatataactcacccttgtacacagcaa 34835466  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgct 139  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  34835465 cactccccctcaagtgtgagtccatcaattcatcatgct 34835427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 34835830 - 34835693
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcg-atgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| ||||||  | | ||||||||||||||||||  ||||||||| |||    
T  34835830 ttaaggcaatgagtttatgggtcctcttacttataaggtgttaaaccttt-actattttatcgggacgtgggacatataactcacccttgtacacagcaa 34835732  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgct 139  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  34835731 cactccccctcaagtgtgagtccatcaattcatcatgct 34835693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 8918832 - 8918975
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| |||| ||||||||||||||||||||||||| ||||||||||||| |||||  |||  |||||||||||| ||||||||| ||| |||||||||    
T  8918832 cttaagtcaataggtttatgggtcctcttacttataaagtgttcaaccttt-actctgctatctgatgtgggacatgtaactcacacttgcacacaacaa 8918930  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||    
T  8918931 cactccccctcaagtgtgagtccatctattcatcatg-tccccctt 8918975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 9482676 - 9482784
Alignment:
Q  5 aggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacact 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||| |||||||||||||  |||||||||||||||||    
T  9482676 aggcaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactcttttatcccatgtggaacatataactcac--ttgtacacaacaacact 9482772  T
Q  105 ccccctcaagtg 116  Q
    ||||||||||||    
T  9482773 ccccctcaagtg 9482784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 3670150 - 3670008
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||||| ||| | ||  |||    
T  3670150 cttaaggaaataggtttatgggtcctcatacttataaggtgttaaaccttt-actattttatccgatgtgggacatataactcacacttgcaaac--caa 3670054  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    || ||||||||||||||||| ||||||||||||||||||| |||||    
T  3670053 cagtccccctcaagtgtgagtccatcaattcatcatgctcaccctt 3670008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 40518672 - 40518533
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| || |||||||||||||||||||| |||||||||||||||||||| ||| || |||  |||||||||||||||||||||| ||| |||||| |     
T  40518672 cttaagtcattgggtttatgggtcctcttatttataaggtgttcaaccttt-acttttctatctgatgtgggacatataactcacacttgaacacaata- 40518575  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccc 144  Q
      |||||||||||||||||| |||||||||||||||||||||||    
T  40518574 --ctccccctcaagtgtgagtccatcaattcatcatgctccccc 40518533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 45121736 - 45121865
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctca 112  Q
    ||||||||| ||||||||||||||||||| ||||||||| |||||||||| |||||||||||| | |||||||| ||||||||||||||||||||||| |    
T  45121736 ggtttatggatcctcttacttataaggtgatcaaccttt-actcttttatccgatgtgggaca-acaactcacacttgtacacaacaacactccccctta 45121833  T
Q  113 agtgtgagcccatcaattcatcatgctccccc 144  Q
    |||||||| |||||| || ||| |||||||||    
T  45121834 agtgtgagtccatcactttatcgtgctccccc 45121865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 3038358 - 3038458
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||| |||||| |||||| ||||||||||||||||||||||| |||||||||||||    
T  3038358 cttaaggcaatgggtttatgggtccttttacttataaagtgttcaacc-tttactattttatccgatgtgggacatataactcacacttgtacacaacaa 3038456  T
Q  101 ca 102  Q
    ||    
T  3038457 ca 3038458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 45123082 - 45122952
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctca 112  Q
    |||||||||||| |||||||||  ||||||| ||||||| ||| |||||| ||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  45123082 ggtttatgggtcatcttactta--aggtgtttaaccttt-actattttatccgatgtgggacatataactcacacttgcacacagcaacactccccctca 45122986  T
Q  113 agtgtgagcccatcaattcatcatgctccccctt 146  Q
    ||||| || ||||| |||||||||| ||||||||    
T  45122985 agtgtaagtccatctattcatcatgttccccctt 45122952  T

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Target: chr8; HSP #14
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 70342 - 70441
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  70342 cttaaggcagtgggtttatgggtcctcttacttataagatgttcaa-catttactcttttatccgatgtgggacatataactcac-tttgtacacaacaa 70439  T

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Target: chr8; HSP #15
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 25561884 - 25561984
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| ||||| |||||||    
T  25561884 cttaagacaatgagtttatgggtcctcttacttataaggtgttcaacgttt-actcttttatccgatgtgggacatataactcacacttgtagacaacaa 25561982  T
Q  101 ca 102  Q
    ||    
T  25561983 ca 25561984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 30359361 - 30359261
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  30359361 cttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacattt-actcttttatccgatgtgagacatataactcacacttgtacacaacaa 30359263  T
Q  101 ca 102  Q
    ||    
T  30359262 ca 30359261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 18372342 - 18372466
Alignment:
Q  19 tgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtg 118  Q
    |||||| |||||||||||||||||||||||||| ||| |||||| ||||||| ||||||||||||||| ||   ||||||||||||||||||||||||||    
T  18372342 tgggtcttcttacttataaggtgttcaaccttt-actattttatccgatgtgagacatataactcacacttt--cacaacaacactccccctcaagtgtg 18372438  T
Q  119 agcccatcaattcatcatgctccccctt 146  Q
    || |||||| || ||| |||||||||||    
T  18372439 agtccatcactttatcgtgctccccctt 18372466  T

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Target: chr8; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 18373004 - 18373140
Alignment:
Q  6 ggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactc 105  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||| |||||| |||||| ||| ||||||||||||| |||||  |||||||||||||||||    
T  18373004 ggcaatgagtttatgagtcctcttatttataaggtgttcaacc-tttactattttatccgaagtgggacatataaatcaca-ctgtacacaacaacactc 18373101  T
Q  106 cccctcaagtgtgagcccatcaattcatcatgctccccc 144  Q
    |  |||||||||||| |||||| || ||| |||||||||    
T  18373102 catctcaagtgtgagtccatcactttatcgtgctccccc 18373140  T

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Target: chr8; HSP #19
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 147540 - 147457
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  147540 ttaaggcaataggtttatgggtcctcttatttataaggtgttcaacc-tttactcttttatccgatgtgggacatataactcaca 147457  T

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Target: chr8; HSP #20
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 50 - 146
Target Start/End: Complemental strand, 147871 - 147776
Alignment:
Q  50 tttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||| ||||||  |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  147871 tttacttttttatcagatgtgggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcaattcatca-gctccccctt 147776  T

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Target: chr8; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 34834966 - 34834865
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||| ||| |||||||||||||||||| ||||||| ||| |||||| | ||||||||||||||||||||| |||||||||||||    
T  34834966 cttaaggcaatgagtttatgagtcatcttacttataaggtgtttaaccttt-actattttatccaatgtgggacatataactcacacttgtacacaacaa 34834868  T
Q  101 cac 103  Q
    |||    
T  34834867 cac 34834865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 18372785 - 18372909
Alignment:
Q  19 tgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtg 118  Q
    |||||||||||||||||||||||||||||| |||||| |||||| ||||||| ||||||||||||||| |  | |||||||||||| | |||||||||||    
T  18372785 tgggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtgtgacatataactcacact--ttcacaacaacact-ctcctcaagtgtg 18372880  T
Q  119 agcccatcaattcatcatgctcccccttg 147  Q
    || |||||| || ||| ||||||||||||    
T  18372881 agtccatcactttatcgtgctcccccttg 18372909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33113435 - 33113535
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||| |||||| |||||| |||||| |||||||||||||| | |||||||||||||    
T  33113435 cttaaggcaatgagtttatgggtcctcttacttataagacgttcaacc-tttactattttatccgatgtaggacatataactcaaacttgtacacaacaa 33113533  T
Q  101 ca 102  Q
    ||    
T  33113534 ca 33113535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 1513983 - 1514078
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaa 97  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| | ||||||||||    
T  1513983 cttaaggttatgggtttaagggtcctcttacttataaggtgttcaacc-tttactcttttatccgatgtgggatatataactcatacttgtacacaa 1514078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3669777 - 3669693
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| ||||||  ||||||||||||||||||||||    
T  3669777 cttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacc-tttactattttatctgatgtgggacatataactcaca 3669693  T

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Target: chr8; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 41972243 - 41972151
Alignment:
Q  6 ggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    ||||||||||||||||||||| | ||||||||||||||||||| |||||| || ||| ||||||||||||||||||||||| ||| ||||||||    
T  41972243 ggcaatgggtttatgggtcctatcacttataaggtgttcaacc-tttacttttctatccgatgtgggacatataactcacacttgcacacaaca 41972151  T

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Target: chr8; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 45121978 - 45122062
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||| ||||||| |||||||||||||||| |||||||||| |||||| |||||| |||||||||||||||||||||||    
T  45121978 cttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacc-tttactattttatgcgatgtgggacatataactcaca 45122062  T

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Target: chr8; HSP #28
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 8794189 - 8794100
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacac 103  Q
    |||||||| ||||||||||||||||| |||||||| ||| | |||||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  8794189 ggtttatgagtcctcttacttataagatgttcaacattt-attcttttatccgatgtgagacatataactcacacttgtacacaacaacac 8794100  T

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Target: chr8; HSP #29
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 9608835 - 9608738
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| ||| ||||||||    
T  9608835 cttaaggtgatgggtttatgggtcatcttacttataaggtgttcaacc-tttacttttctatccgatatgggacatataactcacacttgcacacaaca 9608738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 6731946 - 6731856
Alignment:
Q  50 tttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctccc 142  Q
    |||||| |||||| ||||||||||||||||||||||| |||  || |||||||||||||||||| |||||| ||||| |||||||||||||||    
T  6731946 tttactattttatccgatgtgggacatataactcacacttg--caaaacaacactccccctcaaatgtgagtccatctattcatcatgctccc 6731856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 9309065 - 9308970
Alignment:
Q  5 aggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtg--ggacatataactcacatttgtacacaaca 99  Q
    |||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||  ||||||  |||||||||||||||| ||| ||||||||    
T  9309065 aggcaatgggtttatgggtcctcttacttataacatgttcaa-cttttactcttttatctgatgtgtaggacatataactcacacttgcacacaaca 9308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 18371729 - 18371866
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||| |||||||||||||| |||||||||     |||||||||||| ||| |||||| ||||||| ||||||||||||||  || |||||||||     
T  18371729 cttaaggca-tgggtttatgggtcttcttacttaa----tgttcaaccttt-actattttatccgatgtgtgacatataactcac--ttctacacaacag 18371820  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||||||||||||| |||||| || ||| ||| |||||||    
T  18371821 cactccccctcaagtgtgagtccatcactttatcgtgccccccctt 18371866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 41416251 - 41416322
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcac 85  Q
    ||||||||| |||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  41416251 ggtttatggatcctcttacttataaggtgttcaacc-tttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 45122133 - 45122220
Alignment:
Q  9 aatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaa 97  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||| |||||| ||||||| ||||||||||||||| ||| ||||||    
T  45122133 aatgagtttatgggttctcttacttataaggtgttcaacc-tttactattttatccgatgtgagacatataactcacacttgcacacaa 45122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 45122714 - 45122579
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||| |||||      || ||| ||   ||||    
T  45122714 cttaagacaatgagtttatgggtcctcttacttataaggtgttcaacc-tttactattttatccgatgcgggccatat------cacttgcac---acaa 45122625  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    ||||||||||||||||||||  | || |||||||||||||||||||    
T  45122624 cactccccctcaagtgtgagttcttctattcatcatgctccccctt 45122579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5420741 - 5420663
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataa 80  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||| |||||| || ||| |||||||||||||||||    
T  5420741 cttaaggcaatgggtttatgagtcctcttacttataagatgttcaacc-tttactattctatccgatgtgggacatataa 5420663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9483255 - 9483320
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgat 67  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  9483255 cttaagacaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 6876932 - 6877032
Alignment:
Q  3 taaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggac-atataactcacatttgtacacaacaac 101  Q
    |||| ||||| || |||||||| ||||| ||||||||||||||||| |||||| |||||| ||||||||||| |||||||||||| ||| ||||||||||    
T  6876932 taagacaatgagtgtatgggtcatcttatttataaggtgttcaacc-tttacttttttatccgatgtgggactatataactcacacttgcacacaacaac 6877030  T
Q  102 ac 103  Q
    ||    
T  6877031 ac 6877032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18372062 - 18372142
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataact 82  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||||| |||||| ||||||| ||||||| ||||||||||    
T  18372062 cttaaagcaatgagtttatggatcctcttacttataaggtgttcaacc-tttactattttattggatgtggtacatataact 18372142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 146
Target Start/End: Original strand, 18372487 - 18372581
Alignment:
Q  50 tttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||| |||||| ||||||||||||||||||||||| ||   |||||||||||||||||||||||||||| |||||| || ||| |||| ||||||    
T  18372487 tttactattttatccgatgtgggacatataactcacacttt--cacaacaacactccccctcaagtgtgagtccatcactttatcgtgcttcccctt 18372581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 18380085 - 18380169
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||| | ||||||||| || || |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  18380085 cttaaggtagtgggtttataggcccccttacttataaggtgttcaacc-tttactattttattcgatgtgggatatataactcaca 18380169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 37544566 - 37544658
Alignment:
Q  9 aatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||| ||||||||||||||| ||||||| |||||||||| |||||| |||||| ||||||| ||| ||||||||||| |||| ||||||||||    
T  37544566 aatggatttatgggtcctctttcttataatgtgttcaacc-tttactattttatccgatgtgcgacttataactcacacttgtgcacaacaaca 37544658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 43274847 - 43274947
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| |||| |||||||||||||||||||||||||  | ||||||| |||||||||||||  ||||||  |||||||||||||| || ||||||||||    
T  43274847 cttaagacaataggtttatgggtcctcttacttataatatattcaacc-tttactcttttatctgatgtgaaacatataactcacacttatacacaacaa 43274945  T
Q  101 ca 102  Q
    ||    
T  43274946 ca 43274947  T

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Target: chr8; HSP #44
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 9483080 - 9483144
Alignment:
Q  146 tgctttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||||||| |||||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  9483080 tgctttgtaccgccgttgctgctttctgcgcaaacggaccgactgcctcggttgtacccttcgtc 9483144  T

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Target: chr8; HSP #45
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 25561729 - 25561792
Alignment:
Q  18 atgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataact 82  Q
    |||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25561729 atgggtactcttacttataaggtgttcaacc-tttactcttttatccgatgtgggacatataact 25561792  T

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Target: chr8; HSP #46
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30441175 - 30441087
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttactta----taaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||||||||||||| |||||||||||    |||||||||||||| |||||| |||||  |||||||||||||||||||||||    
T  30441175 cttaaggcaatgggtttatgggccctcttacttataattaaggtgttcaacc-tttactattttagccgatgtgggacatataactcaca 30441087  T

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Target: chr8; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 4154350 - 4154473
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||||||||| ||||||||||| ||| |||||||| |||||||||||   ||| || |||  ||||| |||||||||||||||||||| |||||||||     
T  4154350 ttaaggcaatgagtttatgggtc-tctcacttataaagtgttcaacctcc-acttttctatctgatgtaggacatataactcacatttgcacacaacaa- 4154446  T
Q  102 actccccctcaagtgtgagcccatcaa 128  Q
      ||||||||||||||||| |||||||    
T  4154447 tttccccctcaagtgtgagtccatcaa 4154473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 20870641 - 20870718
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatata 79  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||||  ||||||| |||||||    
T  20870641 cttaaggcagtgggtttatgggtcctcttacttataagatgttcaacc-tttactattttatctgatgtggaacatata 20870718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 40518161 - 40518061
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttac--tcttttattcgatgtgggacatataactcacatttgtacacaac 98  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||| |||||  | |||||| | |||||| |||||||||||||| ||| |||||||    
T  40518161 cttaaggcattgggtttatgggtccatttacttataaggtgttcaacc-tttacttttttttatccaatgtggaacatataactcacacttgaacacaac 40518063  T
Q  99 aa 100  Q
    ||    
T  40518062 aa 40518061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 147714 - 147658
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  147714 ttgtaccgctgttgctgctttctgcgcaaacggactggctgcctcgatcgtaccctt 147658  T

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Target: chr8; HSP #51
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 9482917 - 9482981
Alignment:
Q  146 tgctttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||||||  ||||||  ||||||||||||||||||| |||||||||||||||||||||||    
T  9482917 tgctttgtaccgtcgttgcttttttctgtgcaaacggaccgactgcctcggtcgtacccttcgtc 9482981  T

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Target: chr8; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3037776 - 3037853
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatata 79  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||| ||| || |||||||| |||||||    
T  3037776 cttaagacaatgggtttatgagtcctcttacttataaggtgttcaa-catttactatttcatccgatgtggaacatata 3037853  T

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Target: chr8; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 43274699 - 43274777
Alignment:
Q  66 atgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctccccc 144  Q
    ||||| || |||||||||||| |||||||||||||||||  |||||||||||||| |||||| || ||| |||||||||    
T  43274699 atgtgagatatataactcacacttgtacacaacaacactgtccctcaagtgtgagtccatcactttatcgtgctccccc 43274777  T

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Target: chr8; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 1014326 - 1014397
Alignment:
Q  14 gtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||| ||||||||||||||||||||||||||||| |||||| ||||||  |||||  |||||||||||||||    
T  1014326 gtttacgggtcctcttacttataaggtgttcaacc-tttactattttatctgatgtatgacatataactcaca 1014397  T

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Target: chr8; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 18372676 - 18372762
Alignment:
Q  6 ggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtaca 94  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |||||| |||||| |||  ||| |||||||| ||||| |||||||    
T  18372676 ggcaatgggtttatgagtcctcttacttataa-gtgttcaacc-tttactattttatccgaaatggaacatataaatcacacttgtaca 18372762  T

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Target: chr8; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 20130529 - 20130455
Alignment:
Q  10 atgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||| || ||||||||| |||||||||||| |||||||||||||| ||||||| |||||||| ||||||    
T  20130529 atgggtttatggatcatcttactta-aaggtgttcaac-ttttactcttttatccgatgtgagacatatatctcaca 20130455  T

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Target: chr8; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 45122890 - 45122831
Alignment:
Q  151 tgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    |||||| | |||| ||||||||| |||||||||| |||||||||||||||||||||||||    
T  45122890 tgtaccaccgttgttgctttctgcgcaaacggactggctgcctcggtcgtacccttcgtc 45122831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9507872 - 9507822
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt 51  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  9507872 cttaaggtaatgggtttatgagtcctcttacttataaggtattcaaccttt 9507822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9620744 - 9620841
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||||||| ||||||||||||||| |||||||| ||| |||| ||| |||| || |||  | |||| ||||||||||||||| ||| ||||||||    
T  9620744 cttaaggcaatgagtttatgggtcctctcacttataaagtgatcaa-cttctacttttctatctgttgtgagacatataactcacacttgcacacaaca 9620841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32305567 - 32305517
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt 51  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||||||||    
T  32305567 cttaaggtaatgggtttataggtcttcttacttataaggtgttcaaccttt 32305517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40579574 - 40579624
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt 51  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  40579574 cttaaagcaataagtttatgggtcctcttacttataaggtgttcaaccttt 40579624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 9609174 - 9609125
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt 51  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  9609174 ttaaggcgatgggtttatgggtcatcttacttataagatgttcaaccttt 9609125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32640600 - 32640679
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||||||||||| ||||||||||| ||     ||||||||| ||||||||||||| ||||||| |||| ||||||||||    
T  32640600 cttaaggcaatgggtttatcggtcctcttaccta-----tgttcaacc-tttactcttttatccgatgtgagacagataactcaca 32640679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 34835118 - 34835077
Alignment:
Q  169 ttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  34835118 ttctctgcaaacggaccggctgcctcggtcgtacccttcgtc 34835077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 9609016 - 9608960
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    ||||||||| ||||||||||| || ||||||||||||| | ||||||||||||||||    
T  9609016 ttgtaccgccgttgctgctttatgcgcaaacggaccggtttcctcggtcgtaccctt 9608960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18373238 - 18373288
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt 51  Q
    |||||| ||||||||| |||| |||||||| ||||||||||||||||||||    
T  18373238 cttaagacaatgggttaatggatcctcttatttataaggtgttcaaccttt 18373288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 30359523 - 30359474
Alignment:
Q  160 gttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||| | ||||||||||||||||||||||||||||||| |||||||||    
T  30359523 gttgctggtgtctgtgcaaacggaccggctgcctcggtcgt-cccttcgtc 30359474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 33832055 - 33831971
Alignment:
Q  14 gtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||| ||||||||||||||||| |||||||| ||| |||| || | ||| | ||| ||||||||||||||| ||| ||||||||    
T  33832055 gtttataggtcctcttacttataaagtgttcaa-cttctacttttctcttcaacgtgagacatataactcacacttgcacacaaca 33831971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 5915957 - 5915863
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| |||||||||||||||||    ||| ||||| |||  |||||  |||||| | |||| |||||||||||||||| ||| |||||||||    
T  5915957 cttaaggcaatgagtttatgggtcctctta----taaagtgttaaac--tttacatttttatccaatgtaggacatataactcacacttgcacacaacaa 5915864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 1014141 - 1014199
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||| ||||| |||||||| ||||   ||||||||||||| |||||||||||||||    
T  1014141 ttgtaccgccgttgcggctttctgcgcaac--gaccggctgcctcagtcgtacccttcgtc 1014199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 18371888 - 18371945
Alignment:
Q  149 tttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    |||||| ||| | ||||| |||||  ||||||| ||||||||||||||||||||||||    
T  18371888 tttgtatcgccgctgctggtttctccgcaaacgaaccggctgcctcggtcgtaccctt 18371945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 43398137 - 43398223
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctc---ttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||  |||||||||||||   ||| ||||||||||||||||| |||||| || ||| |||| || || ||||||||||||    
T  43398137 ttaaggcaatgaatttatgggtcctcctcttatttataaggtgttcaacc-tttacttttctatccgatatgagatatataactcaca 43398223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 18372616 - 18372656
Alignment:
Q  162 tgctgctttctgtgcaaacggaccggctgcctcggtcgtac 202  Q
    ||||| |||||  ||||||||||||||||||||||||||||    
T  18372616 tgctggtttctccgcaaacggaccggctgcctcggtcgtac 18372656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 40991839 - 40991795
Alignment:
Q  5 aggcaatgggtttatgggtcctcttacttataaggtgttcaacct 49  Q
    ||||| |||||||||||||||||| |||||| | |||||||||||    
T  40991839 aggcattgggtttatgggtcctctcacttatgaagtgttcaacct 40991795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 26661590 - 26661734
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||| |||||||||||||    
T  26661590 cttaaggcaatgagtttatgggtcctctcacttataaggtgttcaaccttt-actcttttacccgatgtgggacatataactcacacttgtacacaacaa 26661688  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||| ||||||||| ||||| ||||||||| ||| |||||    
T  26661689 cactcccccttaagtgtgagtccatctattcatcatactctccctt 26661734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 41157462 - 41157323
Alignment:
Q  4 aaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacac 103  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||| ||| ||||||||| ||    
T  41157462 aaggcaatgggtttatgggtcctcttacttataaggtgttcaac-ttttactcttttatctgatgtgggacatataactcacacttgcacacaacaatac 41157364  T
Q  104 tccccctcaagtgtgagcccatcaattcatcatgctccccc 144  Q
    ||||||| ||||||||| ||||||||| ||| |||||||||    
T  41157363 tcccccttaagtgtgagtccatcaatttatcgtgctccccc 41157323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 44290526 - 44290668
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||| ||||||||||||||||||||||| |||  || | |||    
T  44290526 cttaaggcaatgggtttatgggtcctcttacttataagatgttcaacc-tttactattttatccgatgtgggacatataactcacacttg--caaaccaa 44290622  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||    
T  44290623 cactccccctcaagtgtgagtccatctattcatcatgctccccctt 44290668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 34365015 - 34364871
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| | | |||||| ||||||| ||||||||||||||| ||| |||||||||    
T  34365015 cttaaggctatgggtttatgggtcctcttacttataaggtgttcaaccttt-attattttatccgatgtgtgacatataactcacacttgcacacaacaa 34364917  T
Q  101 cactccccctcaagtgtgagcccatc-aattcatcatgctccccct 145  Q
    |||||||||||||||||||| |||||   |||||||||||||||||    
T  34364916 cactccccctcaagtgtgagtccatctttttcatcatgctccccct 34364871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 3537226 - 3537357
Alignment:
Q  12 gggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctc 111  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| | ||  ||||||||||||||    
T  3537226 gggtttatgggtcctcttacttataaggtgttcaaccttt-actattttatccgatgtgggacatataactcacacttgcaaac--caacactccccctc 3537322  T
Q  112 aagtgtgagcccatcaattcatcatgctccccctt 146  Q
    ||||||||| ||||||||||||| |||||||||||    
T  3537323 aagtgtgagtccatcaattcatcttgctccccctt 3537357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 37556201 - 37556057
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactctttt-attcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||| |||||||||||| |||||||||||||||| |||||||||||| ||| |||| || ||||||||||||||||||||||| ||||||||||||    
T  37556201 cttaaggctatgggtttatgg-tcctcttacttataagatgttcaaccttt-actatttttatccgatgtgggacatataactcacacttgtacacaaca 37556104  T
Q  100 acactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    ||||||||||||||||||||| |||||| || ||| ||| |||||||    
T  37556103 acactccccctcaagtgtgagtccatcactttatcctgccccccctt 37556057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 17294667 - 17294569
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  17294667 cttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacc-tttactcttttatccgatgtgggacatataactcacacttgtacacaacaa 17294569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 22077563 - 22077701
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| | | ||||||||||||||||||||||||||||||||||| |||||| || ||| ||||||| ||||||||||||||| ||| ||   ||||    
T  22077563 cttaaggctacgagtttatgggtcctcttacttataaggtgttcaacc-tttacttttctatccgatgtgagacatataactcacacttgcac---acaa 22077658  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctcccc 143  Q
    |||||||||||||||||||| ||||  ||||||||||||||||    
T  22077659 cactccccctcaagtgtgagtccatgtattcatcatgctcccc 22077701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 11977370 - 11977252
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||| | |||||||| || ||||||||||||||||||||||| ||| ||| |||||  ||||||||||||||||||||||| ||||||||| |||    
T  11977370 cttaaggcattaggtttatgagtgctcttacttataaggtgttcaacattt-actgttttacccgatgtgggacatataactcacacttgtacacagcaa 11977272  T
Q  101 cactccccctcaagtgtgag 120  Q
    ||||||||||||||||||||    
T  11977271 cactccccctcaagtgtgag 11977252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 48588556 - 48588698
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||  |||| ||||| |||||||||||||||||||||||||| ||| |||||| |||||| ||||||| |||||||| ||| | ||  |||    
T  48588556 cttaaggcaatgaatttacgggtcttcttacttataaggtgttcaaccttt-actattttatccgatgtcggacatagaactcacacttgcaaac--caa 48588652  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||    
T  48588653 cactccccctcaagtgtgagtccatctattcatcatgctacccctt 48588698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41142462 - 41142362
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| ||| ||| |||||    
T  41142462 cttaaggcaatgggtttatgggtccttttacttataaggtgttcaacc-tttactgttttatccgatgtgggacatataactcacacttgcacagaacaa 41142364  T
Q  101 ca 102  Q
    ||    
T  41142363 ca 41142362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 41184493 - 41184593
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||| ||||||| ||||||||||||||| ||| |||||||||    
T  41184493 cttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacc-tttactattttatccgatgtgagacatataactcacacttgcacacaacaa 41184591  T
Q  101 ca 102  Q
    ||    
T  41184592 ca 41184593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 44290893 - 44290977
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  44290893 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtgggacatataactcaca 44290977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 38804423 - 38804521
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||  |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  38804423 cttaaggttatgggtttatggatcctcttacttataatgtgttcaaccttt-actcttttattcgatgtgggacgtataactcacacttgtaaacaacaa 38804521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 66155 - 66296
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacat-ataactcacatttgtacacaaca 99  Q
    |||||||| || |||||||||||||||||||||||||||||||||| | |||||| || ||| ||||||| ||||| || ||||||| ||| ||   |||    
T  66155 cttaaggccataggtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtgagacatgattactcacacttgcac---aca 66251  T
Q  100 acactccccctcaagtgtgagcccatcaattcatcatgctccccc 144  Q
    ||||| ||||||||||||||| ||||| |||||||||| ||||||    
T  66252 acacttcccctcaagtgtgagtccatctattcatcatgttccccc 66296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 30630707 - 30630847
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||||||||| |||||||||| ||||||||||||| ||||  ||||||| | | |||||| ||||||| ||||||||| ||||| ||| ||| ||||      
T  30630707 ttaaggcaatgtgtttatgggttctcttacttataaagtgtcaaacctttaatt-ttttatccgatgtgagacatataaatcacacttgcacataaca-- 30630803  T
Q  102 actccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
     ||||| |||||||||||| |||||||||||||||||||||||||    
T  30630804 -ctccctctcaagtgtgagtccatcaattcatcatgctccccctt 30630847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 34364597 - 34364496
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| ||||||||| || |||||||||||||||||||||||||| |||||| |||||| ||||||| ||||||||||||||| ||| |||||||||    
T  34364597 cttaaggctatgggtttacggatcctcttacttataaggtgttcaacc-tttactattttatccgatgtgagacatataactcacacttgcacacaacaa 34364499  T
Q  101 cac 103  Q
    |||    
T  34364498 cac 34364496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 26661966 - 26662066
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||| |||||||||||||  ||| ||||| |||||||||||| |||||||||||||    
T  26661966 cttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacc-tttactcttttatctgatatgggatatataactcacacttgtacacaacaa 26662064  T
Q  101 ca 102  Q
    ||    
T  26662065 ca 26662066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 29798289 - 29798189
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| | |||| |||||||||||||||| ||| | |||||||    
T  29798289 cttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacc-tttactattttatccaatgtaggacatataactcacacttgcatacaacaa 29798191  T
Q  101 ca 102  Q
    ||    
T  29798190 ca 29798189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41157081 - 41156981
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||||||||| ||||| ||| |||||||||    
T  41157081 cttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacc-tttactcttttatccgttatgggacatataattcacacttgcacacaacaa 41156983  T
Q  101 ca 102  Q
    ||    
T  41156982 ca 41156981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 3550809 - 3550726
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||  ||||||||||||||||||||||    
T  3550809 ttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacc-tttactattttatctgatgtgggacatataactcaca 3550726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31767229 - 31767329
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||| | |||| ||||||||||||||||||||||||||||||| |||||| |||||| |||||||| ||||||||| |||| ||| |||||||||    
T  31767229 cttaaggcattaggttaatgggtcctcttacttataaggtgttcaacc-tttactgttttatccgatgtggaacatataacccacacttgcacacaacaa 31767327  T
Q  101 ca 102  Q
    ||    
T  31767328 ca 31767329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 34649528 - 34649428
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||| | ||||||||||| ||   |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||    
T  34649528 cttaaggcattaggtttatgggttcttgcacttataaggtgttcaaccttt-actcttttatccgatgtgggacatataactcacacttgtatacaacaa 34649430  T
Q  101 ca 102  Q
    ||    
T  34649429 ca 34649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 37850680 - 37850768
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||||||||| ||||||||||||||||||||||||| | ||| |||||| ||||||||||||||||||||||| ||| |||||||||||    
T  37850680 ggtttatgggttctcttacttataaggtgttcaacctct-actgttttatgcgatgtgggacatataactcacacttgcacacaacaaca 37850768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3875399 - 3875497
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||| ||||||| ||||||||||| ||  ||| |||||||||    
T  3875399 cttaaggcaatgggtttatgagtcctcttacttataaggtgtacaacc-tttacttttttatccgatgtgtgacatataactgactcttgcacacaacaa 3875497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 3537667 - 3537747
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataact 82  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  3537667 cttaagccaatgggtttataggtcctcttactcataaggtgttcaacc-tttactattttatccgatgtgggacatataact 3537747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32594784 - 32594868
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||  ||||| ||||||||||||||||    
T  32594784 cttaagacaatgagtttatgggtcctcttacttataaggtgttcaacc-tttactattttatctgatgtaggacatataactcaca 32594868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 41759573 - 41759489
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||||| ||||||| || ||||||||||||||||||||| |||||||| |||||| ||||||| |||||||||||||||    
T  41759573 cttaaggcaatggatttatggatcatcttacttataaggtgttcaa-cttttactattttatccgatgtgtgacatataactcaca 41759489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 44685546 - 44685449
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| | |||||| || ||| |||| |||||||||||||||||| ||| ||||||||    
T  44685546 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 44685449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 50052103 - 50052175
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||||||||||    
T  50052103 ggtttatgggtcctcttacttataagatgttcaacc-tttactattttatccgatgtgggacatataactcaca 50052175  T

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Target: chr1; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 45084457 - 45084378
Alignment:
Q  16 ttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacaca 96  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||| |||||||||||| ||| |||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaacc-tttactgttttatccgatgtgggagatataactcacacttgcacaca 45084378  T

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Target: chr1; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 5320033 - 5320131
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||| || ||| |||||||| |||||||||||||| ||| | |||||||    
T  5320033 cttaaggctatgagtttatgggtcctctcacttataaggtgttcaa-cttttacttttctatccgatgtggaacatataactcacacttgcatacaacaa 5320131  T

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Target: chr1; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44043840 - 44043926
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac-----cttttactcttttattcgatgtgggacatataact 82  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||     || ||||| ||||||||||||||||||||||||||    
T  44043840 cttaagacaatgggtttatgggtcatcttacttataaggtgttcaacatttactattactattttattcgatgtgggacatataact 44043926  T

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Target: chr1; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 21378118 - 21378209
Alignment:
Q  10 atgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||||||||||||||||||||||||||| | ||||||| |||||| || ||| |||| |||||||||||||| ||| ||| |||||||||||    
T  21378118 atgggtttatgggtcctcttacttataagatattcaacc-tttactgttctatccgatctgggacatataactgacacttgcacacaacaaca 21378209  T

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Target: chr1; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40082496 - 40082398
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||  ||||||  |||||||||||||||||||||||||| |||||| |||||| |||||| |||||||||||||||| |||  ||||||||    
T  40082496 cttaaggcaatgaatttatga-tcctcttacttataaggtgttcaacc-tttactattttatccgatgtaggacatataactcacacttgcgcacaacaa 40082399  T

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Target: chr1; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 66540 - 66638
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| ||  |||||||| |||||||||||||||||||||||||| |||||| || ||| |||| ||| |||||||||||||| ||| |||||||||    
T  66540 cttaaggccatatgtttatggatcctcttacttataaggtgttcaacc-tttacttttctatccgatatggaacatataactcacacttgcacacaacaa 66638  T

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Target: chr1; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14318957 - 14318875
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactca 84  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||||| |||||| |||||| ||| |||| ||||||||||||    
T  14318957 cttaaggcaatagatttatgggtcttcttacttataaggtgttcaacc-tttactattttatccgacgtggaacatataactca 14318875  T

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Target: chr1; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 146
Target Start/End: Original strand, 50051781 - 50051861
Alignment:
Q  64 cgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    ||||||||||||||||||||||| ||| | ||  ||||| ||||||||||||||||| |||| ||||||||||||||||||||    
T  50051781 cgatgtgggacatataactcacacttgcaaac--caacattccccctcaagtgtgagtccattaattcatcatgctccccctt 50051861  T

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Target: chr1; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 5575194 - 5575109
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacat 87  Q
    ||||| || |||| ||||| |||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||||||| ||||||    
T  5575194 cttaaagctatggatttataggtcctcttacttataaggtgttcaacc-tttactcttctatccgacgtgggacatataattcacat 5575109  T

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Target: chr1; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 9955999 - 9955913
Alignment:
Q  1 cttaaggcaatgggttta-tgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||||||   | ||||||  ||||||||||||||||||||||    
T  9955999 cttaaggcaattggtttaatgggtcctcttacttataatgtgttcaacctttactttttttatctgatgtgggacatataactcaca 9955913  T

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Target: chr1; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24132053 - 24132150
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||||||| |||||||| ||| |||| ||||||||||||||||| |||||| || ||| ||||| ||||||||||||||||| ||| | ||||||    
T  24132053 cttaaggcaatgagtttatggatccccttatttataaggtgttcaacc-tttacttttctatccgatgagggacatataactcacagttgcatacaaca 24132150  T

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Target: chr1; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 39066268 - 39066369
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| |||||  |||||||||| ||||| ||||||||||||||||| |||||| || ||| |||||||| | |||||||||||| ||| |||||||||    
T  39066268 cttaagacaatgattttatgggtcatcttagttataaggtgttcaacc-tttacttttctatccgatgtggaatatataactcacacttgcacacaacaa 39066366  T
Q  101 cac 103  Q
    |||    
T  39066367 cac 39066369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 22077178 - 22077325
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt---------tactctttt--attcgatgtgggacatataactcacattt 89  Q
    |||| ||||||| ||||||||||||||||||||||||||| ||||||||||         | |  ||||  || ||||||||||||||||||||||| ||    
T  22077178 cttagggcaatgagtttatgggtcctcttacttataaggtattcaacctttacttttctatccgattttctatccgatgtgggacatataactcacactt 22077277  T
Q  90 gtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
    | ||||||   |||||||||||||||||| | ||||| |||||||||||||    
T  22077278 gcacacaa---cactccccctcaagtgtgtgtccatctattcatcatgctc 22077325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24600382 - 24600479
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||| ||||| ||||||| || |||||||||||||  ||||||||| |||||| || ||| |||| |||||||||||||||||| ||| ||||||||    
T  24600382 cttaagacaatgagtttatgagttctcttacttataatatgttcaacc-tttacttttctatccgatatgggacatataactcacacttgcacacaaca 24600479  T

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Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 5528830 - 5528902
Alignment:
Q  9 aatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataact 82  Q
    |||| ||||||| ||||||||| ||||||| ||||||||| ||||||||||||| ||||||| |||||||||||    
T  5528830 aatgagtttatgagtcctcttatttataagatgttcaacc-tttactcttttatccgatgtgagacatataact 5528902  T

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Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 34649701 - 34649644
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttc 207  Q
    ||||||||  |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  34649701 ttgtaccgtcgttgttgctttctgcgcaaacggaccggctgcctcggtcgtacccttc 34649644  T

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Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 37555800 - 37555721
Alignment:
Q  21 ggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||||||||||||||| || |||||||||  ||| |||||| ||||||||||| ||||||||||| || |||||||||||    
T  37555800 ggtcctcttacttataatgtattcaaccttc-actattttatccgatgtgggacttataactcacacttttacacaacaac 37555721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 22793360 - 22793270
Alignment:
Q  9 aatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||| |||||| |||||||| || |||||||| | ||| || ||| ||||||||||||||||||||||| |||  ||||||||    
T  22793360 aatgggtttatggatcctctcacttataaagttttcaacctct-acttttctatacgatgtgggacatataactcacacttgctcacaacaa 22793270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 45494043 - 45494124
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataa----ggtgttcaaccttttactcttttattcgatgtgggacatataa 80  Q
    |||||||||||||||||||| || |||||||||||     |||||||||||||| ||| |||||| |||||||||||||||||    
T  45494043 ttaaggcaatgggtttatggatcatcttacttatatatatggtgttcaaccttt-actattttatccgatgtgggacatataa 45494124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 34364770 - 34364710
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||| ||| ||||||||||||||  ||||||||||||||| || ||||||||||||||||    
T  34364770 ttgtatcgccgttgctgctttctgcacaaacggaccggctgtctgggtcgtacccttcgtc 34364710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 35154155 - 35154207
Alignment:
Q  50 tttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||||||||  |||||||||||||||||||||| ||| |||||||||||    
T  35154155 tttactcttttatctgatgtgggacatataactcacacttgcacacaacaaca 35154207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 22077900 - 22077946
Alignment:
Q  5 aggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt 51  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  22077900 aggctatgagtttatgggtcctcttacttataagatgttcaaccttt 22077946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 24448275 - 24448233
Alignment:
Q  97 acaacactccccctcaagtgtgagcccatcaattcatcatgct 139  Q
    ||||||||||||||||| |||||||||||||||||||| ||||    
T  24448275 acaacactccccctcaattgtgagcccatcaattcatcgtgct 24448233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 30630912 - 30630986
Alignment:
Q  23 tcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaa 97  Q
    ||||||||||||||||||||||| ||||| | | |||||| ||||||  |||||||||||| |||| | ||||||    
T  30630912 tcctcttacttataaggtgttcagcctttaatttttttatccgatgtaagacatataactcgcattcgcacacaa 30630986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 37555994 - 37555932
Alignment:
Q  146 tgctttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcg 208  Q
    ||||||||||||| ||||||||||| || |||| |||||| ||||||||| || |||||||||    
T  37555994 tgctttgtaccgccgttgctgctttttgcgcaatcggaccagctgcctcgatcatacccttcg 37555932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 47380258 - 47380323
Alignment:
Q  74 catataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
    ||||||||||||| ||| |||||||||  || ||||||||||||||  |||||||||||||||||||    
T  47380258 catataactcacacttgcacacaacaat-cttcccctcaagtgtgaatccatcaattcatcatgctc 47380323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 1188391 - 1188436
Alignment:
Q  97 acaacactccccctcaagtgtgagcccatcaattcatcatgctccc 142  Q
    |||||||||  ||||||||||||| |||||||||||||||||||||    
T  1188391 acaacactcatcctcaagtgtgagtccatcaattcatcatgctccc 1188436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41184156 - 41184197
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgt 42  Q
    ||||||||||||||||||||| ||||||||||||||| ||||    
T  41184156 cttaaggcaatgggtttatggatcctcttacttataaagtgt 41184197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 45839707 - 45839617
Alignment:
Q  15 tttatgggtcctcttacttataaggtgttc-----aaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||||| |||||||||||||||||||     |||||||   | || ||| ||||||||||||||||||||| | |||||||||||||||    
T  45839707 tttatgggtcttcttacttataaggtgttcgattcaaccttta--ttttctatccgatgtgggacatataactcatacttgtacacaacaaca 45839617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 66395 - 66427
Alignment:
Q  178 aacggaccggctgcctcggtcgtacccttcgtc 210  Q
    |||||||||||||||||||||||||||||||||    
T  66395 aacggaccggctgcctcggtcgtacccttcgtc 66427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 4956275 - 4956231
Alignment:
Q  7 gcaatgggtttatgggtcctcttacttataaggtgttcaaccttt 51  Q
    |||||| |||||||| |||||||||||||||| ||||||||||||    
T  4956275 gcaatgagtttatggatcctcttacttataagatgttcaaccttt 4956231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 47379915 - 47379991
Alignment:
Q  64 cgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctccccc 144  Q
    |||||||||| |||||||||||| |||    || |||||||||||||||| ||| || ||| ||||||||| |||||||||    
T  47379915 cgatgtgggatatataactcacacttg----catcaacactccccctcaaatgtaagtccaacaattcatcgtgctccccc 47379991  T

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Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 4266875 - 4266940
Alignment:
Q  26 tcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgta 92  Q
    |||||||| ||| ||||||||| ||| ||||||||||   |||| ||||||||||||||||||||||    
T  4266875 tcttacttctaatgtgttcaacattt-actcttttatctaatgtaggacatataactcacatttgta 4266940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 3537495 - 3537532
Alignment:
Q  109 ctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  3537495 ctcaagtgtgagtccatcaaatcatcatgctccccctt 3537532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 1187432 - 1187527
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaa 97  Q
    ||||||| |||| ||||||||||| ||| ||||||||  |||| |||||   ||| || ||||||||||| ||||||||| ||||| ||| ||||||    
T  1187432 cttaaggtaatgagtttatgggtcttctcacttataaaatgtttaacctcc-acttttatattcgatgtgagacatataattcacacttgcacacaa 1187527  T

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Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 11977208 - 11977149
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||  |||||||||||||| |||| | ||||| | |||||||||||||||||||||    
T  11977208 ttgtaccgtcgttgctgctttctgcgcaa-ctgaccgacggcctcggtcgtacccttcgtc 11977149  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 22077418 - 22077450
Alignment:
Q  178 aacggaccggctgcctcggtcgtacccttcgtc 210  Q
    |||||||||||||||| ||||||||||||||||    
T  22077418 aacggaccggctgccttggtcgtacccttcgtc 22077450  T

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Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 41157256 - 41157200
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    ||||||||  |||| |||||| || |||||||||||| |||||| ||||||||||||    
T  41157256 ttgtaccgtcgttgttgctttatgcgcaaacggaccgactgccttggtcgtaccctt 41157200  T

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Target: chr2 (Bit Score: 95; Significance: 1e-46; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 40733950 - 40733829
Alignment:
Q  24 cctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagccc 123  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||    
T  40733950 cctcttacttataaggtgttaaatcttt-actcttttattcgatgtgggacatataactcacacttgtacacaataacactccccctcaagtgtgagtcc 40733852  T
Q  124 atcaattcatcatgctccccctt 146  Q
    |||||||||||||||||||||||    
T  40733851 atcaattcatcatgctccccctt 40733829  T

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Target: chr2; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 15880353 - 15880235
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| |||||||||||||    
T  15880353 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt-actcttttatccgatgtggaacatataactcacacttgtacacaacaa 15880255  T
Q  101 cactccccctcaagtgtgag 120  Q
    |||| ||||| |||||||||    
T  15880254 cacttccccttaagtgtgag 15880235  T

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Target: chr2; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 5542693 - 5542835
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||| |||  || | |||    
T  5542693 cttaaggcaataggtttatgggtcctcttacttataaggtgttcaacc-tttactattttattcgatatgggacatataactcacacttg--caaaccaa 5542789  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||    
T  5542790 cactccccctcaagtgtgagtccatctattcatcatgcttcccctt 5542835  T

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Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 38796298 - 38796431
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctca 112  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  38796298 ggtttataggtcctcttacttataaggtgttcaacattt-actgttttatccgatgtgggacatataactcacacttgcacacaacaacactccccctca 38796396  T
Q  113 agtgtgagcccatc-aattcatcatgctccccctt 146  Q
    |||||||| |||||   ||||||||||||||||||    
T  38796397 agtgtgagtccatctttttcatcatgctccccctt 38796431  T

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Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 40679697 - 40679837
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||| || ||| || ||| |||| |||||||||||||||||||||| ||||||       
T  40679697 cttaaggcgatgggtttatgggttctcttacttataaggtgttcaaccctt-acttttctatccgatatgggacatataactcacatttgcacacaa--- 40679792  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccct 145  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  40679793 cactccccctcaagtgtgagtccatctattcatcatgctccccct 40679837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 28531382 - 28531519
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||| ||| || || ||| ||||||||||||||||||||||| ||| ||   ||||    
T  28531382 cttaaggcaatgagtttatgggacctcttacttataaggtgttcaacc-tttgcttttctatccgatgtgggacatataactcacacttgcac---acaa 28531477  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccc 142  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  28531478 cactccccctcaagtgtgagtccatcagttcatcatgctccc 28531519  T

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Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 34 - 145
Target Start/End: Original strand, 36785664 - 36785774
Alignment:
Q  34 ataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcat 133  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  36785664 ataaggtgttcaaccttt-actattttatccgatgtgggacatataactcacacttgcacacaacaacactccccctaaagtgtgagtccatcaattcat 36785762  T
Q  134 catgctccccct 145  Q
    ||||||||||||    
T  36785763 catgctccccct 36785774  T

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Target: chr2; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 37106278 - 37106156
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| |||  || | |||    
T  37106278 cttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtgggacatataactcacacttg--caaaccaa 37106182  T
Q  101 cactccccctcaagtgtgagcccatc 126  Q
    |||||||||||||||||||| |||||    
T  37106181 cactccccctcaagtgtgagtccatc 37106156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 40733595 - 40733475
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctca 112  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| ||||||  |||||||||||||||||||||| |||||||||| |||||| |||||||    
T  40733595 ggtttatgggtcctcttacttataaggtgttcaacattt-acttttttatctgatgtgggacatataactcacacttgtacacaataacacttcccctca 40733497  T
Q  113 agtgtgagcccatcaattcatc 134  Q
    |||||||| | |||||||||||    
T  40733496 agtgtgagtctatcaattcatc 40733475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36005948 - 36006047
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| |||||||||||||    
T  36005948 cttaaggcaatgagtttatgggtcctcttacttataaggtgttcaa-cttttact-ttctattcgatgtgggacatataactcacacttgtacacaacaa 36006045  T

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Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 6421472 - 6421369
Alignment:
Q  4 aaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacac 103  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  6421472 aaggcaatgagtttatgagtcctcttacttataaggtgttcaaccttt-actcttttatccgatgtgggacatataactcacacttgtgcacaacaacac 6421374  T
Q  104 tcccc 108  Q
     ||||    
T  6421373 ccccc 6421369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 7598684 - 7598560
Alignment:
Q  16 ttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagt 115  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||  |||||||||||||||||||||| |||  |||| |||||||||| |||||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaacc-tttacttttttatctgatgtgggacatataactcacacttg--cacaccaacactccctctcaagt 7598588  T
Q  116 gtgagcccatcaattcatcatgctcccc 143  Q
    ||||| ||||| ||||||||||| ||||    
T  7598587 gtgagtccatctattcatcatgcccccc 7598560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 29676998 - 29676851
Alignment:
Q  1 cttaaggcaatgggtttatgggtc-----ctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacac 95  Q
    ||||||||||||||||||||||||     |||| || ||||||||||| ||||||| |||||||||| |||||||||||||||||||||||  || ||||    
T  29676998 cttaaggcaatgggtttatgggtcttctcctctcacctataaggtgttaaaccttt-actcttttatccgatgtgggacatataactcacacctgcacac 29676900  T
Q  96 aacaacactccccctcaagtgtgagcccatcaattcatcatgctccccc 144  Q
    |||||||| |||||||||||||||| |||||| || ||| |||||||||    
T  29676899 aacaacacaccccctcaagtgtgagtccatcactttatcgtgctccccc 29676851  T

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Target: chr2; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 14745362 - 14745503
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||||||  ||||| |||||||||||||||||||||||||||||| |||  || | |||    
T  14745362 cttaaggcaatgggtttatgggtcctcatacttacaagatgttcaacc-attactattttattcgatgtgggacatataactcacagttg--caaaccaa 14745458  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||| |||||||||| ||||  |||| |||||||||||||||||||    
T  14745459 cact-cccctcaagtttgagtacatctattcatcatgctccccctt 14745503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36178673 - 36178757
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  36178673 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtgggacatataactcaca 36178757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 14745735 - 14745819
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| | |||||||||||||||||||||    
T  14745735 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactattttatccaatgtgggacatataactcaca 14745819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37106014 - 37105930
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  37106014 cttaaggcaatgagtttatgggtccccttacttataaggtgttcaacc-tttactattttattcgatgtgggacatataactcaca 37105930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 6422200 - 6422065
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||||| |||||| ||||||  |||||||||||      ||||||||| ||   ||||    
T  6422200 cttaaggctatgggtttatgggtcctcttaattataatgtgttcaacc-tttacttttttatctgatgtgggaca------tcacatttgcac---acaa 6422111  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
     ||||||||||||||||||| |||||||||||||||||||||||||    
T  6422110 gactccccctcaagtgtgagtccatcaattcatcatgctccccctt 6422065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6713066 - 6712964
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| | |||||| |||||| ||||||| ||||||||||||||| ||||| |||||||    
T  6713066 cttaaagcaataggtttatgggtcctcttacttataaggtgttcaa-catttactgttttatccgatgtgagacatataactcacacttgtatacaacaa 6712968  T
Q  101 cact 104  Q
    ||||    
T  6712967 cact 6712964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 3673120 - 3673035
Alignment:
Q  57 ttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctccc 142  Q
    |||||| | ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  3673120 ttttatccaatgtgggacatataactcacacttgcacacaacaacactcctcctcaagtgtgagtccatcaattcatcatgctccc 3673035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38796688 - 38796788
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| |||| | ||||||  |||||||||||||||||||||| ||| |||||||||    
T  38796688 cttaaggcattaggtttatgggtcctcttacttataaggtgttcaacc-tttattgttttatcagatgtgggacatataactcacacttgcacacaacaa 38796786  T
Q  101 ca 102  Q
    ||    
T  38796787 ca 38796788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41283543 - 41283627
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||    
T  41283543 cttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacc-tttactattttatccgatatgggacatataactcaca 41283627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 31468818 - 31468926
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| |||||||||||||||||    |||| | |||||||||| ||| |||||| ||||||||||||||||||||||| ||| |||||||||    
T  31468818 cttaaggcaatgagtttatgggtcctctta----taagatattcaaccttt-actattttatccgatgtgggacatataactcacacttgcacacaacaa 31468912  T
Q  101 cactccccctcaag 114  Q
    ||||||||||||||    
T  31468913 cactccccctcaag 31468926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 31899496 - 31899594
Alignment:
Q  3 taaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | |||||| |||||| |||||||| |||||||||||||| ||  |||||||||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttcaa-catttactattttatccgatgtggaacatataactcacactttcacacaacaaca 31899594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 36178337 - 36178460
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||||||||||| |||| |||||||||||||||||| ||| |||||| |||||| ||| ||||||||||||||||||| |||  || | |||    
T  36178337 cttaagacaatgggtttatgagtccccttacttataaggtgttccacc-tttactattttatccgaagtgggacatataactcacacttg--caaaccaa 36178433  T
Q  101 cactccccctcaagtgtgagcccatca 127  Q
    || ||||||||||||||||| ||||||    
T  36178434 cagtccccctcaagtgtgagtccatca 36178460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 962688 - 962591
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||| || ||| ||||||||||||||||||||||| ||| | ||||||    
T  962688 cttaagacaatgggtttatgggtcctctcacttataaggtgttcaacc-tttacttttctatccgatgtgggacatataactcacacttgcatacaaca 962591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 15511563 - 15511661
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| || |||| ||||||||||||||  ||| |||||||||    
T  15511563 cttaagacaatgggtttatgggtcctcttacttataacgtgttcaacc-tttactcttttatccgttgtgtgacatataactcac--ttgcacacaacaa 15511659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16542539 - 16542438
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||  ||||||||| ||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||| ||| |||||||||    
T  16542539 cttaaggcaatgagtttataagtcctcttatttataaggtgttcaacc-tttactattttatccgatgtgggacttataactcacacttgcacacaacaa 16542441  T
Q  101 cac 103  Q
    |||    
T  16542440 cac 16542438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 5543066 - 5543150
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| ||||||  ||||||||||||||||||||||    
T  5543066 cttaaggcaataggtttatggatcctcttacttataaggtgttcaacc-tttactattttatcggatgtgggacatataactcaca 5543150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28254305 - 28254405
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||| |||||| || ||| ||||||||||||||||| ||||| | | |||||||||    
T  28254305 cttaaggcaatgagtttatgggtcctcttacttataagatgttcaacc-tttacttttctatccgatgtgggacatataagtcacactggcacacaacaa 28254403  T
Q  101 ca 102  Q
    ||    
T  28254404 ca 28254405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 37894760 - 37894892
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||| |||||| ||| ||||||||||||||| || | ||||| ||| || ||||| ||||||||||||||||||||||||| ||   ||||    
T  37894760 cttaaggcaatggatttatgagtcttcttacttataaggtttttagccttt-acttttctattcaatgtgggacatataactcacatttgcac---acaa 37894855  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatg 137  Q
     ||||||||| |||| |||| ||||| ||||||||||    
T  37894856 tactcccccttaagtatgagtccatctattcatcatg 37894892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42514739 - 42514642
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| || |||  ||||| |||||||||||||||| ||| | ||||||    
T  42514739 cttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacc-tttacttttctatctgatgtaggacatataactcacacttgcatacaaca 42514642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 1769969 - 1769889
Alignment:
Q  14 gtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacac 95  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| ||| ||||    
T  1769969 gtttatgagtcctcttacttataaggtgttcaac-ttttactcttttatccgatgtgtgacatataactcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33731738 - 33731654
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||| || ||||||||||||    
T  33731738 cttaaggcaataggtttatggatcctcttacttataaggtgctcaacc-tttactcttttatccgatgtgagatatataactcaca 33731654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 35580792 - 35580886
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaa 97  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||| ||| | | |||||| ||||||||||||||||||||||| ||| ||||||    
T  35580792 cttaaggcaatgggtttatgg-tcctctcacttataaggtgttcaacattt-attgttttatccgatgtgggacatataactcacacttgcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 12529097 - 12529195
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||| | |||||| ||||||| ||||| |||||||||||||||| ||| | ||||||||    
T  12529097 ttaaggcaatgagtttatgagtcctcttacttatacggtgttcaatc-tttactgttttatttgatgtaggacatataactcacacttgcatacaacaac 12529195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 30323554 - 30323417
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| |||||| |||||||| |||| ||| |||||||||||   | | || |||  ||| ||||||||||||| |||| ||| |||||||||    
T  30323554 cttaaggcaatgagtttataggtcctctcacttctaaagtgttcaacctccaatt-ttctatctgatttgggacatataacacacacttgcacacaacaa 30323456  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
      |||||||||||||||||| |||||||||||||||||||    
T  30323455 t-ctccccctcaagtgtgagtccatcaattcatcatgctc 30323417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36178239 - 36178311
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggac 74  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||| |||||| |||||| |||||||||||    
T  36178239 cttaaggcaatgggtttatgggttcccttacttataaggtgttcaacc-tttactattttatccgatgtgggac 36178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 40734300 - 40734231
Alignment:
Q  70 gggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgct 139  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||||| ||||    
T  40734300 gggacatataactcacacttgtacacaataacactccccctcaagtgtgattccatcaattcatcgtgct 40734231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 30313267 - 30313131
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| |||| |||||||||| ||||||||| ||||||||||   ||| || ||| ||||||| |||||||||| |||  ||| |||||||||    
T  30313267 cttaaggcaatgagtttttgggtcctctcacttataag-tgttcaacctcc-acttttctatccgatgtgagacatataacacacgcttgcacacaacaa 30313170  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
      || ||||||||||||||| ||| |||||||||||||||    
T  30313169 t-cttcccctcaagtgtgagtccaacaattcatcatgctc 30313131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 6421346 - 6421289
Alignment:
Q  50 tttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccc 107  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  6421346 tttactcttttatccgatgtgggacatataacttacacttgtacacaacaacactccc 6421289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 37632674 - 37632762
Alignment:
Q  10 atgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    ||||||||||||||||||||||||||||  |||  ||||||| ||| |||||| |||||| |||||||||||||||| ||| ||||||||    
T  37632674 atgggtttatgggtcctcttacttataaaatgtcaaaccttt-actattttatccgatgtaggacatataactcacacttgcacacaaca 37632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 40734146 - 40734090
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  40734146 ttgtaccgttgttgctgctttctgcgcaaacgaaccggctgcctcggtcgtaccctt 40734090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16590973 - 16590881
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||||||| ||||||||||||||||||||      ||||||||||||   | ||||||| |||||||||||||||||||||| ||| ||||||||    
T  16590973 cttaaggcaatgtgtttatgggtcctcttactt------tgttcaacctttactttttttatttgatgtgggacatataactcacacttgcacacaaca 16590881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 5367545 - 5367448
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||  ||| ||| |||| || ||||||||||||||||||||||| ||| ||||||||| |||| |||||||||||  ||||| ||||||||||||    
T  5367545 cttaaggttatgtgttcatggatcatcttacttataaggtgttcaacc-tttgctcttttatccgatctgggacatatatatcacacttgtacacaaca 5367448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 7598318 - 7598225
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacac 95  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| |||| |||||| || |||||||||| | |||||||| ||||| ||| ||||    
T  7598318 cttaaggctatgagtttatgggtcctcttatttataaggtgttgaacc-tttacttttctattcgatgtagaacatataattcacacttgcacac 7598225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 29676622 - 29676543
Alignment:
Q  4 aaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactca 84  Q
    ||||||||| |||||||||| |||| |||||||| |||||||| |||| |||||||||| | ||||| |||||||||||||    
T  29676622 aaggcaatgagtttatgggttctctcacttataatgtgttcaatcttt-actcttttatccaatgtgagacatataactca 29676543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 40163453 - 40163520
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataac 81  Q
    |||| ||||||| ||||||||||||||||||||||| |||||| || ||| ||||||||||||||||||    
T  40163453 ggttaatgggtcatcttacttataaggtgttcaacc-tttacttttctatccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 29874091 - 29874185
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacaca 96  Q
    |||||||||||||||||||||||||||  | |||||| |||||||||| |  ||| || |||  ||||||||||||||||| |||| |||||||||    
T  29874091 cttaaggcaatgggtttatgggtcctcccaattataaagtgttcaacc-tccacttttctatctgatgtgggacatataacacacacttgtacaca 29874185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 37895129 - 37895211
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactca 84  Q
    |||||||||||||||||||| || || |||||| |||||| ||||| |||||| | || ||| |||||||||||||||||||||    
T  37895129 cttaaggcaatgggtttatgtgttcttttacttttaaggttttcaa-cttttatttttctatccgatgtgggacatataactca 37895211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 31259696 - 31259787
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattc---gatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||||||| |||||||||||||||||| |||| ||||||||||||| |   |||||| |||||||||||| || ||  |||||||||||    
T  31259696 ggtttatgggtcatcttacttataaggtgttgaacc-tttactcttttatccgatgatgtgagacatataactcgcacttacacacaacaaca 31259787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 42515078 - 42514965
Alignment:
Q  29 tacttataaggtgttcaaccttttactcttttattcgatgtggg----acatataactcacatttgtacacaacaacactccccctcaagtgtgagccca 124  Q
    ||||||||||||||| |||| |||||| || ||| |||||||||    ||||||||||||||  || ||   ||||||||||||||||| |||||| |||    
T  42515078 tacttataaggtgtttaacc-tttacttttctatccgatgtgggacatacatataactcacacctgcac---acaacactccccctcaaatgtgagtcca 42514983  T
Q  125 tcaattcatcatgctccc 142  Q
    || |||||||||||||||    
T  42514982 tctattcatcatgctccc 42514965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 29873605 - 29873732
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||| ||||||  ||||||||  ||||||||||   ||| || |||  |||||||||||| |||| |||  ||| |||||||||    
T  29873605 cttaaggcaatgagtttatgagtcctcccacttataaaatgttcaacctcc-acttttctatctgatgtgggacatgtaacacacccttgcacacaacaa 29873703  T
Q  101 cactccccctcaagtgtgagcccatcaatt 130  Q
      |||||||||||||||||| |||||||||    
T  29873704 t-ctccccctcaagtgtgagtccatcaatt 29873732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 35580532 - 35580597
Alignment:
Q  81 ctcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||| ||| |||||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||    
T  35580532 ctcacacttgcacacaacagcactctccctcaagtgtgagtccatctattcatcatgctcctcctt 35580597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31385827 - 31385779
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 49  Q
    |||||||||||||||||||||||||| | |||||||||||| |||||||    
T  31385827 cttaaggcaatgggtttatgggtcctttcacttataaggtgctcaacct 31385779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 33561519 - 33561648
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||| ||||||||||||||| |||||||| ||||| |||| |  ||| || |||  ||||||| |||||||||||||| ||| ||   ||||    
T  33561519 cttaagacaatgagtttatgggtcctctcacttataaagtgtttaacc-tccacttttctatctgatgtggaacatataactcacacttgcac---acaa 33561614  T
Q  101 cactccccctcaagtgtgagcccatcaattcatc 134  Q
    || ||||| ||||||| | | |||||||||||||    
T  33561615 cattccccatcaagtgcgtgtccatcaattcatc 33561648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23346326 - 23346250
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatata 79  Q
    |||||||| ||||||||||||| ||||||| |||||||||||| |||| |||||| || ||| ||||||| ||||||||    
T  23346326 cttaaggctatgggtttatgggccctctta-ttataaggtgtttaacc-tttacttttctatacgatgtgagacatata 23346250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 28254181 - 28254254
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacat 76  Q
    ||||||||| | ||||||| |||||||||||||||| |||||||||| |||||| || ||| ||||||| |||||    
T  28254181 ttaaggcaaagtgtttatgagtcctcttacttataaagtgttcaacc-tttacttttctatccgatgtgagacat 28254254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 3672754 - 3672709
Alignment:
Q  57 ttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||    
T  3672754 ttttattcgatgtgggacatataactcatacttgcacacaacaaca 3672709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 34481643 - 34481598
Alignment:
Q  97 acaacactccccctcaagtgtgagcccatcaattcatcatgctccc 142  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||    
T  34481643 acaacactctccctcaagtgtgagtccatcaattcatcacgctccc 34481598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 36785840 - 36785901
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggct-gcctcggtcgtacccttcgtc 210  Q
    ||||||||| ||||||||||| |||||||||||| || || |||||| ||||||||||||||    
T  36785840 ttgtaccgccgttgctgctttatgtgcaaacggatcgtctggcctcgatcgtacccttcgtc 36785901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 7598490 - 7598431
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||  |||||||||||||| |||| |||||||||| |||| |||||||||||||||    
T  7598490 ttgtaccgtcgttgctgctttctgcgcaa-cggaccggctacctcagtcgtacccttcgtc 7598431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 41678447 - 41678572
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatata--actcacatttgtacacaacaacactccccct 110  Q
    |||||||||||||||| |||||||| ||||| |||||    || || |||  |||||| ||||||||  ||||||| ||| ||||||   |||||||| |    
T  41678447 ggtttatgggtcctctcacttataaagtgtttaacctccc-cttttctatctgatgtgagacatatataactcacacttgcacacaa---cactcccctt 41678542  T
Q  111 caagtgtgagcccatcaattcatcatgctc 140  Q
    |||||||||| |||||||||||| ||||||    
T  41678543 caagtgtgagtccatcaattcataatgctc 41678572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 3672951 - 3672904
Alignment:
Q  163 gctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||||| ||||||||||||||||||||| ||  ||||||||||    
T  3672951 gctgctttctgcgcaaacggaccggctgcctcgatcacacccttcgtc 3672904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 40679895 - 40679954
Alignment:
Q  151 tgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||| || |||||||||||||| ||| ||||||||||| | ||||||||||| ||||||    
T  40679895 tgtactgccgttgctgctttctgcgcatacggaccggctacttcggtcgtaccattcgtc 40679954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 38796463 - 38796513
Alignment:
Q  160 gttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||| |||||  |||||||||| |||||||| ||||||||||||||||    
T  38796463 gttgctggtttctccgcaaacggactggctgcctaggtcgtacccttcgtc 38796513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2336714 - 2336666
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 49  Q
    ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  2336714 cttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 2336666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 94; Significance: 5e-46; HSPs: 7)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 1174 - 1318
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||    
T  1174 cttaaggcaatgggtttatgagtcctttttcttataaggtgttcaaccttt-actcttttatccaatgtgggacatataactcacacttgtacacaacaa 1272  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    || ||||||||||||||||| |||||  || |||||||||||||||    
T  1273 cattccccctcaagtgtgagtccatcttttgatcatgctccccctt 1318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 3092 - 3197
Alignment:
Q  40 tgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgct 139  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  3092 tgttcaaccttt-actcttttatccgatgtgggacatataactcacacctgcacacaacaacactccccctcaagtgtgagtccatcaactcatcatgct 3190  T
Q  140 ccccctt 146  Q
    |||||||    
T  3191 ccccctt 3197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 1384 - 1444
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  1384 ttgtaccgccgttgctgctttctgcacaaacggaccggctgcctcggtcatacccttcgtc 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1759 - 1802
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttc 44  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  1759 cttaaggcaatgggtttatgggtcctctcacttataaggtgttc 1802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 3275 - 3323
Alignment:
Q  161 ttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgt 209  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||||||    
T  3275 ttgctgctttttgtgcaaacggaccgactgccttggtcgtacccttcgt 3323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 146
Target Start/End: Original strand, 1464 - 1510
Alignment:
Q  100 acactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    ||||||||||||||||||||| | ||| |||||||||||||||||||    
T  1464 acactccccctcaagtgtgagtcaatcgattcatcatgctccccctt 1510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 1591 - 1635
Alignment:
Q  162 tgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||    
T  1591 tgctgctttctgcgcaaacggaccagctgcctcggttgtaccctt 1635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 5447 - 5303
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| |||||||| |||||||||||||| ||| |||||||||    
T  5447 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt-actgttctatccgatgtggaacatataactcacacttgcacacaacaa 5349  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
     |||| |||||||||||||| |||||| |||||| |||||||||||    
T  5348 aactctccctcaagtgtgagtccatcagttcatcgtgctccccctt 5303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 5070 - 4972
Alignment:
Q  3 taaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||||| ||||||||||| | ||||||||||| | || |||| |||||| || | | ||||||| ||||||||| ||||| ||| |||||||||||    
T  5070 taaggcaatgagtttatgggtctttttacttataagatattaaacc-tttactgttctctccgatgtgagacatataattcacacttgcacacaacaaca 4972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 17524 - 17663
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||| ||| ||||||  |||||| ||||||||||||||| ||| |||||||||    
T  17524 cttaaggctatgggtttatgggtcctcttacttacaaggtgttcaaccttt-actattttatctgatgtgtgacatataactcacacttgcacacaacaa 17622  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctcc 141  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  17623 cactccccctcaagtgtgagtccatctattcatcatgctcc 17663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 7e-45; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 36629327 - 36629186
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| || ||| ||||||||||||||||||||||| ||| ||||||||     
T  36629327 cttaaggcaatgagtttatgggtcctcttacttataaggtgtttaac-ttttacttttctatccgatgtgggacatataactcacacttgaacacaaca- 36629230  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
      ||||||||||||||||||||||||||||||||||||||| ||||    
T  36629229 --ctccccctcaagtgtgagcccatcaattcatcatgctccacctt 36629186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 39404488 - 39404346
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||| || |||||||||||||||||||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||| |||||||||||||    
T  39404488 cttaaggctataggtttatgggtcctcttacttataaggtgttccaccttt-actcttttatctgatgtgggacatataactcacacttgtacacaacaa 39404390  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccct 145  Q
    |||||| |||||||||| || ||||||||||||| ||||| ||||    
T  39404389 cactcctcctcaagtgt-agtccatcaattcatcgtgctctccct 39404346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 20826306 - 20826166
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||| |||||| |||||||||||||||||||||||||| |||| ||||      
T  20826306 ttaaggctatgggtttatgggttctcttacttataacgtgttcaac-ttttactattttatccgatgtgggacatataactcacatttctacataaca-- 20826210  T
Q  102 actccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
     |||||||||||||||||| ||||| |||||||||||||||||||    
T  20826209 -ctccccctcaagtgtgagtccatctattcatcatgctccccctt 20826166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 52884977 - 52884860
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| ||| |||||||||    
T  52884977 cttaaggcaatgggtttatggatcctcttacttataaggtgttcaacc-tttactattttatccgatgtgggacatataactcacacttgcacacaacaa 52884879  T
Q  101 cactccccctcaagtgtgag 120  Q
    |||| |||||||||||||||    
T  52884878 cact-cccctcaagtgtgag 52884860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36572109 - 36572007
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  36572109 cttaaggcaatggatttatgggtcttcttacttataaggtgttcaacattt-actcttttattcgatgtgggacatataactcacacttgtacacaacaa 36572011  T
Q  101 cact 104  Q
    ||||    
T  36572010 cact 36572007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 44620738 - 44620608
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctca 112  Q
    ||||||||||||||||||||||||| ||||||||||| | ||| ||| || ||||||||||||||||||||||| ||| ||||||| ||||||| |||||    
T  44620738 ggtttatgggtcctcttacttataaagtgttcaacctct-actatttcatccgatgtgggacatataactcacacttgcacacaacgacactccacctca 44620640  T
Q  113 agtgtgagcccatcaattcatcatgctccccc 144  Q
    |||||||| ||||||||||||| |||||||||    
T  44620639 agtgtgagtccatcaattcatcgtgctccccc 44620608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 49076515 - 49076660
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||| ||| |||||| |||| ||| |||||||||||||| ||| ||||||||||    
T  49076515 ttaagacaatgggtttataggtcctcttacttataaggtgttcaaccttt-actgttttatccgatatggtacatataactcacacttgcacacaacaac 49076613  T
Q  102 actccccctcaagtgtgagcccatca--attcatcatgctccccctt 146  Q
    ||||| ||||||||||||| ||||||   ||||||||| ||||||||    
T  49076614 actcctcctcaagtgtgagtccatcacttttcatcatgttccccctt 49076660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 54109003 - 54108864
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||  |||||| ||| ||| ||   ||||    
T  54109003 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtgggac--ataactgacacttgcac---acaa 54108910  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||||| ||||||||| | || ||||||||||||||||||||    
T  54108909 cactcccccttaagtgtgagtctattaattcatcatgctccccctt 54108864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 44621492 - 44621374
Alignment:
Q  25 ctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagccca 124  Q
    ||||||||||||||||||| ||||||| ||| |||||| | |||| |||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||    
T  44621492 ctcttacttataaggtgtttaaccttt-actgttttatcccatgttggacatataactcacacttgcacacaacgacactccccctcaagtgtgagtcca 44621394  T
Q  125 tcaattcatcatgctccccc 144  Q
    |||||||||| |||||||||    
T  44621393 tcaattcatcgtgctccccc 44621374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 2741161 - 2741026
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||| |||||| || |||  |||||||||||||||||||||| ||| ||   | ||    
T  2741161 cttaaggcaatggagttatgggtcctcttacttataaggtattcaacc-tttactattctatctgatgtgggacatataactcacacttgcac---ataa 2741066  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  2741065 cactccccttcaagtgtgagtccatcaattcatcatgctc 2741026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 3341203 - 3341093
Alignment:
Q  16 ttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagt 115  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||||| | ||||||||||||||||||||| ||| ||||||||||||||  ||||||||    
T  3341203 ttatgggtcctcttacttataaagtgtttaaccttt-actcttttatccaatgtgggacatataactcacacttgcacacaacaacactctgcctcaagt 3341105  T
Q  116 gtgagcccatca 127  Q
    ||||| ||||||    
T  3341104 gtgagtccatca 3341093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 43174585 - 43174480
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattc-gatgtgggacatataactcacatttgtacacaacaacactccccctc 111  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||  || |||||| | ||||||||||||| ||||||||||||||||||||||||    
T  43174585 ggtttatgtgtcctcttacttataaggtgttcaaccttt-actctttttatctgatgtgtggcatataactcacacttgtacacaacaacactccccctc 43174487  T
Q  112 aagtgtg 118  Q
    |||||||    
T  43174486 aagtgtg 43174480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1731713 - 1731813
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||| ||||||  |||||||||||||||||||||||||| |||||||||    
T  1731713 cttaaggcaattggtttatgggtcctcttatttataagatgttcaacc-tttactgttttatctgatgtgggacatataactcacatttgcacacaacaa 1731811  T
Q  101 ca 102  Q
    ||    
T  1731812 ca 1731813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25483426 - 25483326
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| |||||| ||||||| ||||||||||||||| ||| |||||||||    
T  25483426 cttaaggcaatgggtttatggatcctcttacttataagatgttcaacc-tttactattttatccgatgtgagacatataactcacacttgcacacaacaa 25483328  T
Q  101 ca 102  Q
    ||    
T  25483327 ca 25483326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34646715 - 34646815
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||| ||||||| ||||||||| |||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||| |||||||||||||    
T  34646715 cttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacattt-actgttttatccgatgtgggacatataactcacacttgtacacaacaa 34646813  T
Q  101 ca 102  Q
    ||    
T  34646814 ca 34646815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 49880250 - 49880166
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  49880250 cttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacc-tttactattttattcaatgtgggacatataactcaca 49880166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 22028027 - 22028150
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||| |||  | |||||| ||||||||||||||||| ||||| ||| |||||||||    
T  22028027 cttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacc-tttcgtattttatccgatgtgggacatataagtcacacttgcacacaacaa 22028125  T
Q  101 cactccccctcaagtgtgagcccat 125  Q
    ||| || ||| ||||||||| ||||    
T  22028126 cacccctccttaagtgtgagtccat 22028150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41707530 - 41707628
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||| |||||||||| || ||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||    
T  41707530 cttaagacaatgagtttatgggttcttttacttatatggtgttcaaccttt-actcttttatccgatgtgggacatataactcacacttgtacacaacaa 41707628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 3244518 - 3244658
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||| ||||| ||||||||||||||||||||||||| ||||||||| |||||| || ||| ||||||| ||||||||||||||| ||| ||   |||||    
T  3244518 ttaagacaatgagtttatgggtcctcttacttataagatgttcaacc-tttacttttctatccgatgtgagacatataactcacacttgcac---acaac 3244613  T
Q  102 actccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||| |||| ||| ||||| ||||| |||||||||| ||||||||    
T  3244614 actctcccttaagcgtgagtccatctattcatcatgttccccctt 3244658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 10246436 - 10246319
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| |||| || ||||||||||  ||| ||| |||||||| |    
T  10246436 ttaaggctatgggtttatgggtcctctaacttataagatgttcaacc-tttactcttttatccgatttgagacatataacagacacttgcacacaacagc 10246338  T
Q  102 actccccctcaagtgtgag 120  Q
    ||||||||||||| |||||    
T  10246337 actccccctcaagcgtgag 10246319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 20825914 - 20825829
Alignment:
Q  13 ggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    ||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||    
T  20825914 ggtttatgggtgctcttatttataaggtgttcaaccttt-actcttttatccgatgtggaacatataactcacatttgtacacaaca 20825829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 45489421 - 45489522
Alignment:
Q  25 ctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacact-ccccctcaagtgtgagccc 123  Q
    |||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||    
T  45489421 ctcttacttatatggtgttcaaccttt-actcttttatccgatgtgagacatataattcacacttgtacacaacaacactcccccctcaagtgtgagtcc 45489519  T
Q  124 atc 126  Q
    |||    
T  45489520 atc 45489522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 52884785 - 52884688
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    ||||||||||||||||||| | || ||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| ||| ||||||||    
T  52884785 cttaaggcaatgggtttatcgatcatcttacttataaggtgttcaacc-tttactattttatccgatgtgggacatataactcacacttgcacacaaca 52884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 4955383 - 4955483
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || ||| |||||| |||| || ||||||||||||||| ||| |||||||||    
T  4955383 cttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacc-ttaactattttatccgatatgagacatataactcacacttgcacacaacaa 4955481  T
Q  101 ca 102  Q
    ||    
T  4955482 ca 4955483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10246009 - 10245910
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||| ||| |||||||||    
T  10246009 cttaaggctttgggtttatgg-tcctcttacttataaggtgttcaaccttt-actcttttatccgatgtggggcatataactcacacttgcacacaacaa 10245912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 22183330 - 22183430
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||| ||| |||||||||| |||||||||| |||||||||||| ||| |||||||||    
T  22183330 cttaaggcaatgggtttatgggtccttttacttataaattgttcaacattt-actcttttatccgatgtgggatatataactcacacttgcacacaacaa 22183428  T
Q  101 ca 102  Q
    ||    
T  22183429 ca 22183430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36608727 - 36608827
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| |||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  36608727 cttaagacaatggatttatggatcctcttacttatgaggtgttcaac-ttttactcttttatccgatgttggacatataactcacacttgcacacaacaa 36608825  T
Q  101 ca 102  Q
    ||    
T  36608826 ca 36608827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 50630821 - 50630904
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcac 85  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||| |||||| |||||||||||||||    
T  50630821 cttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacc-tttactattttatccgatgtaggacatataactcac 50630904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 55933191 - 55933274
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||| |||||| ||||||||||||||||    
T  55933191 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-cttactattttatccgatgtaggacatataactcaca 55933274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2740790 - 2740693
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    ||||||||  ||||||||| |||||||||||||||||||||||||||| |||||| || ||| ||||||||||||||||||||||| ||| ||||||||    
T  2740790 cttaaggctctgggtttataggtcctcttacttataaggtgttcaacc-tttactgttctatccgatgtgggacatataactcacacttgcacacaaca 2740693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 54017661 - 54017754
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacac 95  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||  || ||||||||||||||||||| ||| ||||    
T  54017661 cttaaggcaatgggtttatgggtcctcttacttataagatgttcaacc-tttactattttatctgacgtgggacatataactcacacttgcacac 54017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 50002516 - 50002416
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| |||||| |||||||||||||||||||| || |||||||||| ||||||||||||| ||||||| ||||||||||||||| ||| | |||||||    
T  50002516 cttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacc-tttactcttttatccgatgtgagacatataactcacacttgcaaacaacaa 50002418  T
Q  101 ca 102  Q
    ||    
T  50002417 ca 50002416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 3340897 - 3340802
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaa 97  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||| ||  |||| ||||||||||||||||| ||| ||||||    
T  3340897 cttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacc-tttactctttcatctgatgcgggacatataactcacacttgcacacaa 3340802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 39404108 - 39404013
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaa 97  Q
    ||||| || ||| ||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  39404108 cttaatgctatgagtttatgagtcctcttacttataaagtgttcaaccttt-actcttttattcaatgtaggacatataactcacacttgtacacaa 39404013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 41370446 - 41370363
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| | |||||| |||||| |||| ||||||||||||||||||    
T  41370446 ttaaggcaatgggtttatgggtcctcttacttataaggttttcaa-catttactattttatccgatttgggacatataactcaca 41370363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 49302996 - 49302910
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttac--ttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||| ||||||| ||||||||||||||||||||||    
T  49302996 cttaaggcaatgggtttatgggtcctcttacttttataagatgttcaacc-tttacttttttatttgatgtgggacatataactcaca 49302910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 51768126 - 51768225
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||| ||||| ||||||| ||||||||| |||||||||||||||| ||| |||||| |||||||| | |||||||||||||||||||| |||||||||    
T  51768126 cttaagacaatgagtttatgagtcctcttatttataaggtgttcaacattt-actcttatattcgatataggacatataactcacatttgcacacaacaa 51768224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 54017768 - 54017870
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtggg--acatataactcacatttgtacacaac 98  Q
    |||||| |||||||  |||||||||||||||||||||||||||||||| |||||| |||||| |||||||||  | |||||||||||||||| |||||||    
T  54017768 cttaagacaatgggaatatgggtcctcttacttataaggtgttcaacc-tttactgttttatccgatgtgggatatatataactcacatttgcacacaac 54017866  T
Q  99 aaca 102  Q
    ||||    
T  54017867 aaca 54017870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 54936286 - 54936190
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||  ||||||||    |||||||||| |||||||||||||    
T  54936286 cttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacc-tttactattttatctgatgtggg----ataactcacacttgtacacaacaa 54936192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 44620362 - 44620286
Alignment:
Q  25 ctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||||||| |||||||||||||||||    
T  44620362 ctcttacttataaggtgttcaaccttt-actattttatcccatgtgggacatataactcatatttgtacacaacaaca 44620286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 2740953 - 2740893
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  2740953 ttgtaccgctgttgctgctttctgcgcaaacggatcggctgcctcggtcgtacccttcgtc 2740893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 16888884 - 16888993
Alignment:
Q  3 taaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttg-tacacaacaac 101  Q
    |||| ||||| |||||| ||| |||||||||||||||| ||||||| |||||| || ||| ||||||||||||||||||||||| |||  ||||||||||    
T  16888884 taagacaatgagtttataggttctcttacttataaggtattcaacc-tttacttttctatccgatgtgggacatataactcacacttgccacacaacaac 16888982  T
Q  102 actccccctca 112  Q
    ||| |||||||    
T  16888983 acttcccctca 16888993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 39792926 - 39793023
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||||||| ||||| || ||||||| |||||||||||||||| | |||||| || |||  |||||||||||||||||||||| ||||||||||||    
T  39792926 cttaaggcaatgagtttacggttcctctttcttataaggtgttcaa-catttacttttctatctgatgtgggacatataactcacacttgtacacaaca 39793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44620443 - 44620362
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactc 83  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||| |||||| |||||| |||||||| |||||||||||    
T  44620443 cttaaggcaatgggtttatgggctctcttatttataaggtgttcaacc-tttactgttttatccgatgtggaacatataactc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 50459803 - 50459727
Alignment:
Q  9 aatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||| ||||||||||||||||| ||||||||| ||||||||||||  |||||||| ||||||||||||||    
T  50459803 aatgggtttatgagtcctcttacttataagatgttcaacc-tttactcttttaaccgatgtggaacatataactcaca 50459727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 20826100 - 20826040
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  20826100 ttgtaccgccgttgctgctttctgcgcaaatggaccggctgcctcggtcgtacccttcgtc 20826040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 4390189 - 4390267
Alignment:
Q  23 tcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||| || ||||||||| ||| |||||||||||    
T  4390189 tcctcttacttataaggtgttcaacc-tttactcttttatctgatgtgggatatgtaactcacacttgcacacaacaaca 4390267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 18932815 - 18932967
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttat-----------tcgatgtgggacatataactcacattt 89  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||||||            ||||||||||||||||||||| | ||    
T  18932815 cttaaggcaatgggtttatgggtcctcttatttataaggtattcaacc-tttactattttatccgatgtaggaccgatgtgggacatataactcagactt 18932913  T
Q  90 gtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctccccctt 146  Q
    |  || | |||||| |||||||||||||||| | ||| |||||||||||||||||||    
T  18932914 g--caaaccaacac-ccccctcaagtgtgagtctatctattcatcatgctccccctt 18932967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 22028436 - 22028539
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt-tactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||||||| |  | |||||| |||||| |||||||||| | ||| ||| |||||||||    
T  22028436 ttaagacaatgagtttatgggtcctcttactaataaggtgttcaacctttatttttttttatccgatgtaggacatataagtaacacttgcacacaacaa 22028535  T
Q  101 cact 104  Q
    ||||    
T  22028536 cact 22028539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 3700434 - 3700357
Alignment:
Q  22 gtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||| |||||||||||||||||||| ||| |||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  3700434 gtccttttacttataaggtgttcaacattt-actcttttatccgatgtaggacatataactcacacttgcacacaacaa 3700357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 44621011 - 44620926
Alignment:
Q  25 ctcttacttataaggtgttcaaccttttactcttttattcgatgt-gggacatataactcacatttgtacacaacaacactccccct 110  Q
    ||||||||||||||||||||||||||| ||  |||||| |||||| ||||||| ||||||||| |||| ||||||||||||||||||    
T  44621011 ctcttacttataaggtgttcaaccttt-acagttttatccgatgttgggacatctaactcacacttgtccacaacaacactccccct 44620926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 54343086 - 54343147
Alignment:
Q  20 gggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataact 82  Q
    ||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  54343086 gggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtgggacatataact 54343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 54741260 - 54741341
Alignment:
Q  17 tatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||||||||||||||||||||||||||| |||||| || ||| ||||||| ||||||||| ||||| ||| ||||||||    
T  54741260 tatgggtcctcttacttataaggtgttcaacc-tttacttttctatccgatgtgagacatataattcacacttgcacacaaca 54741341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 40067118 - 40067041
Alignment:
Q  17 tatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtaca 94  Q
    |||| |||||||||||||||| ||||||||| |||||| ||||||| |||||| | |||||||||||||| |||||||    
T  40067118 tatgtgtcctcttacttataatgtgttcaactttttacacttttatccgatgtagaacatataactcacacttgtaca 40067041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 45496895 - 45496820
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacata 77  Q
    |||||| ||||| |||||| |||||||||||||||||||||||||||| |||||  |||||| ||||||||||||||    
T  45496895 cttaagacaatgagtttataggtcctcttacttataaggtgttcaacc-tttacgattttatccgatgtgggacata 45496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44621092 - 44621011
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactc 83  Q
    |||||| ||||| ||||||| | ||||||||||||||||||||||||| |||||| |||||| ||||||||| |||| |||||    
T  44621092 cttaagacaatgagtttatgtgccctcttacttataaggtgttcaacc-tttactgttttatccgatgtgggtcatacaactc 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 760279 - 760195
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcaca 86  Q
    |||||||||||| ||||||||||||||| |||||||| ||  |||||| || | | || |||||||||||||||||||||||||||    
T  760279 cttaaggcaatgagtttatgggtcctctcacttataaagttctcaacc-ttcatttttctattcgatgtgggacatataactcaca 760195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 6975530 - 6975610
Alignment:
Q  9 aatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttg 90  Q
    ||||| |||||| ||||||||||||||||| | ||||||| |||||| ||||||  |||||| |||||||||||||||||||    
T  6975530 aatggatttatgagtcctcttacttataagatattcaacc-tttactattttatcggatgtgagacatataactcacatttg 6975610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 16889430 - 16889490
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||| ||||||||||||||  |||||||||||| |||||| |||||||||||||||    
T  16889430 ttgtaccgccgttgctgctttctgcacaaacggaccggttgcctcagtcgtacccttcgtc 16889490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 23817573 - 23817633
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||  |||||||||||||| |||||| |||||||||||||| ||||||||||||||    
T  23817573 ttgtaccgtcgttgctgctttctgcgcaaacagaccggctgcctcgatcgtacccttcgtc 23817633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 44621262 - 44621202
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||| ||| |||||||||||||| | |||||||||||||| |||||||||||||||||||    
T  44621262 ttgtatcgccgttgctgctttctgcgaaaacggaccggctgtctcggtcgtacccttcgtc 44621202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 50627668 - 50627723
Alignment:
Q  151 tgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtaccctt 206  Q
    |||||||| | |||||||||||||||||||| ||||||||||||| ||||||||||    
T  50627668 tgtaccgccgctgctgctttctgtgcaaacgaaccggctgcctcgatcgtaccctt 50627723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32941189 - 32941286
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    |||||||||||| ||||||| | ||||||| ||||||||||||||||| |||||| || | | ||||||  ||||||||||||||| ||| | ||||||    
T  32941189 cttaaggcaatgagtttatgagccctcttatttataaggtgttcaacc-tttactgttctttccgatgtaagacatataactcacacttgcagacaaca 32941286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 39404271 - 39404221
Alignment:
Q  160 gttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    |||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  39404271 gttgctgctttctacgcaaacggaccggctgcctcggtcatacccttcgtc 39404221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 16889603 - 16889703
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttg-tacacaacaa 100  Q
    |||||||| | ||||||||  |||||||||||||||||| ||||||| |||||| || ||| |||| || ||||||||||||||| |||  |||||||||    
T  16889603 ttaaggcagtaggtttatgaatcctcttacttataaggtattcaacc-tttacttttctatccgatttgagacatataactcacacttgccacacaacaa 16889701  T
Q  101 ca 102  Q
    ||    
T  16889702 ca 16889703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 31691416 - 31691355
Alignment:
Q  149 tttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||| | |||||| |||||| ||||||||||| || |||||||||||||||||||||    
T  31691416 tttgtaccgtttttgctgttttctgcgcaaacggaccagcggcctcggtcgtacccttcgtc 31691355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 49076897 - 49076992
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaac 98  Q
    |||||||  |||||||||||||| ||||||| |||||||||||||||| |||||| |||||  | || ||| |||||||||||||| ||| |||||||    
T  49076897 cttaaggttatgggtttatgggttctcttac-tataaggtgttcaacc-tttactattttagccaatatggaacatataactcacacttgcacacaac 49076992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 34004658 - 34004744
Alignment:
Q  9 aatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaa 97  Q
    |||| ||||||||||||||||||||||||| |||||||||||| | | ||||||   ||||| ||||||||||||||| ||| ||||||    
T  34004658 aatgagtttatgggtcctcttacttataagttgttcaaccttt-agt-ttttatcatatgtgtgacatataactcacacttgcacacaa 34004744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 43174409 - 43174345
Alignment:
Q  146 tgctttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||||||  |||||| ||||||| ||||||||||||||||||||| || |||| ||||||    
T  43174409 tgctttgtaccgtcgttgctactttctgcgcaaacggaccggctgcctcgatcttacctttcgtc 43174345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 54108798 - 54108739
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    |||||||||  |||||||||| || |||||||||||||||||||| |||||||||||||||    
T  54108798 ttgtaccgccattgctgctttatgcgcaaacggaccggctgcctc-gtcgtacccttcgtc 54108739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 15841050 - 15841183
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    ||||| ||||||||||||| | |||||| ||||||||  |||||| |||   ||| || |||  ||| |||||||||||| ||||||||||||||||| |    
T  15841050 cttaaagcaatgggtttatagatcctctcacttataaaatgttcagcctcc-acttttctatctgatatgggacatataattcacatttgtacacaacga 15841148  T
Q  101 cactccccctcaagtgtgagcccatcaattcatcat 136  Q
      |||| | ||||||||||  |||||||||||||||    
T  15841149 -tctcctcgtcaagtgtgactccatcaattcatcat 15841183  T

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Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 19504757 - 19504695
Alignment:
Q  39 gtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||||||| ||||||| |||||| |||| |||||||||||||||| | |||||||||||||||    
T  19504757 gtgttcaac-ttttactattttatccgatatgggacatataactcatacttgtacacaacaaca 19504695  T

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Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31691242 - 31691203
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggt 40  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  31691242 cttaaggcaatgagtttatgggtcctcttacttataaggt 31691203  T

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Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 45050643 - 45050593
Alignment:
Q  50 tttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||| |||||| ||||||||||||||| ||| |||||||||    
T  45050643 tttactcttttatttgatgtgagacatataactcacacttgcacacaacaa 45050593  T

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Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 54108612 - 54108551
Alignment:
Q  15 tttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacata 77  Q
    |||||||||||| ||||||||||||||||||||| |||||| |||||| | || |||||||||    
T  54108612 tttatgggtccttttacttataaggtgttcaacc-tttactattttatcctatatgggacata 54108551  T

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Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 41370618 - 41370560
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||| ||||| |||||||||||||   |||||||||||||||||| ||||||||||    
T  41370618 ttgtaccgccgttgcggctttctgtgcaac--gaccggctgcctcggtcgcacccttcgtc 41370560  T

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Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 11348396 - 11348494
Alignment:
Q  3 taaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||||||||  | ||||| |||||| |||||||| |||||||||| |  ||| ||||||  ||||| | |||||||||||||| ||| |||||||||||    
T  11348396 taaggcaatgaatatatggatcctctcacttataaagtgttcaacc-tccactattttatctgatgtagaacatataactcacaattgcacacaacaaca 11348494  T

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Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28034319 - 28034222
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaaca 99  Q
    ||||| |||||  |||||||||| |||| |||||||| |||||||||| |  ||| || ||| ||||| ||||||||||| ||||| ||| ||||||||    
T  28034319 cttaaagcaataagtttatgggttctctcacttataaagtgttcaacc-tccacttttctatccgatgcgggacatataattcacacttgcacacaaca 28034222  T

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Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43827530 - 43827480
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt 51  Q
    ||||||||||||  |||||||||||||||| |||||||| |||||| ||||    
T  43827530 cttaaggcaatgaatttatgggtcctcttatttataaggagttcaatcttt 43827480  T

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Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48111764 - 48111833
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgg 71  Q
    ||||||| ||||| |||||  ||||| |||||||||| |||||||||| ||||||||||||| ||| ||||    
T  48111764 cttaaggtaatggatttataagtccttttacttataatgtgttcaacc-tttactcttttatccgaggtgg 48111833  T

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Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 146
Target Start/End: Original strand, 41707340 - 41707373
Alignment:
Q  113 agtgtgagcccatcaattcatcatgctccccctt 146  Q
    |||||||| |||||||||||||||||||||||||    
T  41707340 agtgtgagtccatcaattcatcatgctccccctt 41707373  T

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Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3271877 - 3271841
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataa 37  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  3271877 cttaaggcaataggtttatgggttctcttacttataa 3271841  T

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Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18879896 - 18879852
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttca 45  Q
    ||||||| ||| ||||||| |||| ||||||||||||||||||||    
T  18879896 cttaaggaaataggtttataggtcatcttacttataaggtgttca 18879852  T

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Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34544196 - 34544148
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 49  Q
    |||||||||||| ||||||||||||||| | |||||| ||| |||||||    
T  34544196 cttaaggcaatgagtttatgggtcctctcatttataaagtgatcaacct 34544148  T

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Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 45489608 - 45489668
Alignment:
Q  150 ttgtaccgctgttgctgctttctgtgcaaacggaccggctgcctcggtcgtacccttcgtc 210  Q
    ||||||||| |||||| || |||   |||||||||||| || |||||||||||||||||||    
T  45489608 ttgtaccgccgttgctactatctacacaaacggaccggttgtctcggtcgtacccttcgtc 45489668  T

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Target: scaffold0702 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 582 - 682
Alignment:
Q  1 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||| ||||||||    
T  582 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-tttactcttttaaccgatgtgggacatataactcacacttgtgcacaacaa 680  T
Q  101 ca 102  Q
    ||    
T  681 ca 682  T

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Target: scaffold0702; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 146
Target Start/End: Original strand, 230 - 351
Alignment:
Q  21 ggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgag 120  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| |||  || | |||||||||||| ||| ||||||    
T  230 ggtcctcttacttataaggtgttcaacc-tttactattttatccgatgtgggacatataactcacacttg--caaaccaacactccccc-caaatgtgag 325  T
Q  121 cccatcaattcatcatgctccccctt 146  Q
     ||||  |||||||||||||||||||    
T  326 tccatttattcatcatgctccccctt 351  T

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Target: scaffold0504 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 10192 - 10279
Alignment:
Q  14 gtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaaca 102  Q
    ||||||||||||||||||||||||||||||||| |||||||  |||||| ||||||| ||||||||||||||| |||| ||||||||||    
T  10192 gtttatgggtcctcttacttataaggtgttcaa-cttttaccattttatccgatgtgagacatataactcacacttgtgcacaacaaca 10279  T

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Target: scaffold0113 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 39866 - 39792
Alignment:
Q  64 cgatgtgggacatataactcacatttgtacacaacaacactccccctcaagtgtgagcccatcaattcatcatgctc 140  Q
    ||||||||||||||||||||||| ||| |||||||||   |||||||||||||||||  ||||||||||||||||||    
T  39866 cgatgtgggacatataactcacacttgaacacaacaat--tccccctcaagtgtgagttcatcaattcatcatgctc 39792  T

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Target: scaffold0027 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 47449 - 47350
Alignment:
Q  2 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttactcttttattcgatgtgggacatataactcacatttgtacacaacaac 101  Q
    |||||||||||||||||||| | |||||||||||||||||||||| | |||||| ||||||  |||||| ||||| ||| ||||| ||| ||||| ||||    
T  47449 ttaaggcaatgggtttatggattctcttacttataaggtgttcaaac-tttactattttatcggatgtgagacatttaattcacacttgcacacatcaac 47351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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