View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2601_high_6 (Length: 231)

Name: NF2601_high_6
Description: NF2601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2601_high_6
NF2601_high_6
[»] chr8 (38 HSPs)
chr8 (46-222)||(33692057-33692230)
chr8 (1-45)||(27849828-27849872)
chr8 (1-39)||(12320991-12321029)
chr8 (1-47)||(25063336-25063382)
chr8 (1-42)||(16816827-16816868)
chr8 (1-45)||(5704714-5704757)
chr8 (1-45)||(14188089-14188132)
chr8 (1-45)||(29845170-29845214)
chr8 (93-129)||(33692214-33692250)
chr8 (1-36)||(3673929-3673964)
chr8 (1-39)||(5917286-5917324)
chr8 (1-39)||(11637638-11637676)
chr8 (1-47)||(24242671-24242717)
chr8 (1-47)||(27928155-27928200)
chr8 (1-47)||(40744328-40744373)
chr8 (1-46)||(5895881-5895925)
chr8 (1-46)||(6317298-6317342)
chr8 (1-46)||(28372471-28372516)
chr8 (1-46)||(34711641-34711685)
chr8 (1-45)||(2442761-2442804)
chr8 (1-45)||(2733615-2733658)
chr8 (1-45)||(3728412-3728455)
chr8 (1-45)||(4312132-4312175)
chr8 (1-45)||(4430821-4430864)
chr8 (1-45)||(4694773-4694816)
chr8 (1-45)||(4977120-4977163)
chr8 (1-45)||(8547216-8547259)
chr8 (1-41)||(10096615-10096654)
chr8 (1-45)||(10286551-10286594)
chr8 (1-33)||(10457149-10457181)
chr8 (1-45)||(11098160-11098203)
chr8 (1-45)||(11100374-11100417)
chr8 (1-45)||(11265142-11265185)
chr8 (1-45)||(27545002-27545045)
chr8 (1-45)||(35421704-35421747)
chr8 (1-45)||(36586481-36586524)
chr8 (1-45)||(38070567-38070610)
chr8 (1-45)||(41562441-41562484)
[»] chr2 (35 HSPs)
chr2 (1-51)||(7607326-7607376)
chr2 (1-39)||(37103326-37103364)
chr2 (1-45)||(44948018-44948061)
chr2 (1-47)||(35706849-35706894)
chr2 (1-42)||(11543885-11543926)
chr2 (1-45)||(433137-433180)
chr2 (1-45)||(727375-727418)
chr2 (1-45)||(19134602-19134646)
chr2 (2-45)||(21840536-21840577)
chr2 (1-45)||(30854821-30854865)
chr2 (1-45)||(35476576-35476619)
chr2 (1-48)||(2287395-2287441)
chr2 (2-33)||(9993180-9993211)
chr2 (1-39)||(32517904-32517942)
chr2 (1-47)||(34667041-34667086)
chr2 (1-46)||(20251571-20251615)
chr2 (1-46)||(23080184-23080228)
chr2 (1-54)||(23957042-23957094)
chr2 (1-46)||(29741044-29741088)
chr2 (1-46)||(32023250-32023294)
chr2 (1-46)||(40812015-40812059)
chr2 (1-46)||(42160343-42160387)
chr2 (1-45)||(4014899-4014942)
chr2 (1-45)||(13268061-13268104)
chr2 (1-45)||(15897213-15897256)
chr2 (1-45)||(16535029-16535072)
chr2 (1-45)||(33607042-33607085)
chr2 (1-45)||(35687872-35687915)
chr2 (1-45)||(36754827-36754870)
chr2 (1-45)||(38490486-38490529)
chr2 (1-37)||(39417449-39417485)
chr2 (1-45)||(40592312-40592355)
chr2 (1-45)||(41164734-41164777)
chr2 (1-45)||(42007301-42007344)
chr2 (1-45)||(45049384-45049427)
[»] chr7 (24 HSPs)
chr7 (1-46)||(33228697-33228742)
chr7 (1-45)||(40013262-40013306)
chr7 (1-45)||(47086386-47086430)
chr7 (1-37)||(30627630-30627666)
chr7 (1-39)||(6030724-6030762)
chr7 (1-39)||(24333345-24333383)
chr7 (1-42)||(38261003-38261043)
chr7 (1-45)||(9379990-9380033)
chr7 (1-45)||(37117931-37117974)
chr7 (1-41)||(46715776-46715816)
chr7 (1-39)||(46021517-46021555)
chr7 (1-46)||(43188527-43188572)
chr7 (1-46)||(48612515-48612559)
chr7 (1-46)||(48729770-48729814)
chr7 (1-45)||(788932-788975)
chr7 (1-41)||(1869818-1869858)
chr7 (1-45)||(2228166-2228209)
chr7 (1-45)||(2354883-2354926)
chr7 (1-45)||(3497603-3497646)
chr7 (1-45)||(4887599-4887642)
chr7 (1-41)||(34708676-34708716)
chr7 (1-45)||(35157170-35157213)
chr7 (1-45)||(45236929-45236972)
chr7 (1-45)||(47584757-47584800)
[»] chr4 (37 HSPs)
chr4 (1-45)||(13632088-13632132)
chr4 (1-39)||(13849360-13849398)
chr4 (1-46)||(35273392-35273437)
chr4 (1-53)||(55853400-55853452)
chr4 (1-56)||(4431977-4432032)
chr4 (2-39)||(41293148-41293185)
chr4 (1-45)||(49319730-49319773)
chr4 (139-182)||(51969103-51969146)
chr4 (1-47)||(12821162-12821207)
chr4 (1-39)||(24870601-24870639)
chr4 (1-39)||(37340193-37340231)
chr4 (1-39)||(46343333-46343371)
chr4 (1-39)||(50981784-50981822)
chr4 (1-46)||(3802997-3803042)
chr4 (1-42)||(8810855-8810896)
chr4 (17-46)||(14285093-14285122)
chr4 (1-46)||(17480929-17480974)
chr4 (1-46)||(23974728-23974772)
chr4 (1-46)||(24712086-24712130)
chr4 (1-46)||(42154224-42154268)
chr4 (1-45)||(1982560-1982603)
chr4 (1-45)||(3084328-3084371)
chr4 (1-45)||(4379306-4379349)
chr4 (1-45)||(5060496-5060539)
chr4 (1-45)||(5397026-5397069)
chr4 (1-45)||(9569474-9569517)
chr4 (1-45)||(12316016-12316059)
chr4 (17-45)||(12694522-12694550)
chr4 (1-41)||(28187250-28187289)
chr4 (1-45)||(29894409-29894452)
chr4 (1-45)||(30044670-30044713)
chr4 (1-45)||(31263587-31263630)
chr4 (1-45)||(36752358-36752401)
chr4 (1-45)||(42856562-42856605)
chr4 (1-45)||(46488203-46488246)
chr4 (1-45)||(49535884-49535927)
chr4 (1-45)||(49882795-49882838)
[»] chr3 (44 HSPs)
chr3 (1-45)||(11029662-11029706)
chr3 (1-45)||(28171065-28171109)
chr3 (1-37)||(37278622-37278658)
chr3 (1-44)||(10071602-10071645)
chr3 (1-47)||(47410838-47410883)
chr3 (1-47)||(53583958-53584003)
chr3 (1-42)||(43904581-43904622)
chr3 (1-46)||(46894811-46894855)
chr3 (1-45)||(11751210-11751254)
chr3 (1-45)||(19961368-19961411)
chr3 (1-45)||(27396853-27396896)
chr3 (1-45)||(28266525-28266568)
chr3 (1-45)||(38085805-38085848)
chr3 (1-45)||(38127928-38127971)
chr3 (1-41)||(40840171-40840211)
chr3 (1-45)||(47069005-47069049)
chr3 (1-44)||(37928837-37928880)
chr3 (1-47)||(38485537-38485584)
chr3 (1-39)||(7251625-7251663)
chr3 (1-47)||(9583509-9583555)
chr3 (1-47)||(32961064-32961109)
chr3 (1-51)||(50238926-50238975)
chr3 (1-46)||(3917764-3917808)
chr3 (1-46)||(4232263-4232307)
chr3 (1-46)||(24657409-24657453)
chr3 (1-46)||(44037530-44037574)
chr3 (1-45)||(2687558-2687601)
chr3 (1-45)||(4833195-4833238)
chr3 (1-45)||(6583321-6583364)
chr3 (1-45)||(8381078-8381121)
chr3 (1-45)||(8792815-8792859)
chr3 (1-45)||(8826624-8826667)
chr3 (1-45)||(13525168-13525211)
chr3 (1-45)||(24910374-24910417)
chr3 (1-41)||(28731850-28731889)
chr3 (1-45)||(30553054-30553097)
chr3 (1-41)||(30703093-30703133)
chr3 (1-45)||(32590971-32591014)
chr3 (1-45)||(40559673-40559716)
chr3 (1-45)||(41464663-41464706)
chr3 (1-45)||(43898049-43898092)
chr3 (1-45)||(46838813-46838856)
chr3 (1-45)||(49285507-49285550)
chr3 (1-41)||(52256838-52256878)
[»] chr5 (45 HSPs)
chr5 (1-46)||(23074730-23074775)
chr5 (1-41)||(972680-972720)
chr5 (1-45)||(1269605-1269648)
chr5 (1-45)||(21728659-21728703)
chr5 (2-36)||(9599319-9599353)
chr5 (1-47)||(22620737-22620782)
chr5 (1-45)||(1612371-1612415)
chr5 (1-45)||(1833405-1833449)
chr5 (1-45)||(40318871-40318915)
chr5 (1-45)||(41408625-41408669)
chr5 (1-45)||(42448210-42448253)
chr5 (1-47)||(7179387-7179432)
chr5 (1-39)||(8595573-8595611)
chr5 (1-39)||(22792196-22792234)
chr5 (1-46)||(1244267-1244311)
chr5 (1-46)||(4617852-4617896)
chr5 (1-46)||(12707962-12708006)
chr5 (1-46)||(16496598-16496642)
chr5 (1-46)||(17869210-17869254)
chr5 (1-46)||(18473912-18473956)
chr5 (1-42)||(19836173-19836213)
chr5 (148-181)||(19949572-19949605)
chr5 (1-46)||(23311259-23311303)
chr5 (1-46)||(37940916-37940960)
chr5 (1-46)||(41562456-41562500)
chr5 (1-45)||(1277436-1277480)
chr5 (1-45)||(2103025-2103068)
chr5 (1-45)||(4164958-4165001)
chr5 (1-45)||(5203549-5203593)
chr5 (1-45)||(6029611-6029654)
chr5 (1-41)||(6053137-6053176)
chr5 (1-45)||(6672240-6672283)
chr5 (3-39)||(11462741-11462777)
chr5 (1-45)||(11968775-11968818)
chr5 (1-45)||(12878204-12878247)
chr5 (1-45)||(15067226-15067270)
chr5 (2-42)||(17080467-17080506)
chr5 (1-45)||(24652400-24652443)
chr5 (1-45)||(28143318-28143361)
chr5 (1-45)||(28489181-28489225)
chr5 (1-45)||(36185136-36185179)
chr5 (1-45)||(36569278-36569321)
chr5 (1-45)||(36726988-36727031)
chr5 (1-45)||(39143440-39143483)
chr5 (1-45)||(39151012-39151055)
[»] chr6 (19 HSPs)
chr6 (1-45)||(2018848-2018892)
chr6 (1-45)||(16496738-16496782)
chr6 (1-39)||(9297761-9297799)
chr6 (1-39)||(9727499-9727537)
chr6 (1-46)||(24571703-24571747)
chr6 (1-46)||(31444376-31444421)
chr6 (17-46)||(4996870-4996899)
chr6 (1-42)||(21513074-21513114)
chr6 (1-45)||(2314685-2314728)
chr6 (1-45)||(4083586-4083629)
chr6 (1-45)||(7098805-7098848)
chr6 (1-45)||(8448228-8448271)
chr6 (1-45)||(8457032-8457075)
chr6 (1-45)||(8939625-8939668)
chr6 (1-45)||(10181044-10181087)
chr6 (1-45)||(10330803-10330847)
chr6 (1-45)||(10531385-10531428)
chr6 (1-45)||(17534609-17534652)
chr6 (1-45)||(31205269-31205312)
[»] chr1 (39 HSPs)
chr1 (1-45)||(270407-270451)
chr1 (1-39)||(10430425-10430463)
chr1 (1-38)||(236575-236612)
chr1 (1-46)||(25821036-25821080)
chr1 (1-45)||(8050480-8050524)
chr1 (1-45)||(30455203-30455246)
chr1 (1-45)||(40685528-40685571)
chr1 (1-45)||(49948240-49948283)
chr1 (1-45)||(50248028-50248071)
chr1 (1-39)||(4628050-4628088)
chr1 (1-39)||(7204594-7204632)
chr1 (1-39)||(7267910-7267948)
chr1 (1-39)||(8312614-8312652)
chr1 (1-39)||(26856796-26856834)
chr1 (1-39)||(32947624-32947662)
chr1 (1-39)||(43841864-43841902)
chr1 (1-39)||(45611547-45611585)
chr1 (1-46)||(5598299-5598343)
chr1 (1-42)||(21897767-21897807)
chr1 (1-46)||(40809299-40809343)
chr1 (1-46)||(43676110-43676154)
chr1 (1-46)||(48314165-48314209)
chr1 (1-41)||(3840448-3840487)
chr1 (17-45)||(4126574-4126602)
chr1 (1-45)||(8214622-8214665)
chr1 (1-45)||(10635488-10635531)
chr1 (1-37)||(13116932-13116968)
chr1 (1-45)||(19338264-19338307)
chr1 (1-45)||(23225376-23225420)
chr1 (1-45)||(28999373-28999416)
chr1 (1-45)||(29005089-29005132)
chr1 (1-45)||(34010093-34010136)
chr1 (1-41)||(39606407-39606447)
chr1 (1-45)||(40503596-40503639)
chr1 (1-45)||(40958660-40958703)
chr1 (1-45)||(42631071-42631114)
chr1 (1-45)||(43025885-43025928)
chr1 (1-45)||(48391955-48391998)
chr1 (1-41)||(48731842-48731881)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-46)||(195738-195783)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-45)||(160446-160490)
[»] scaffold0778 (1 HSPs)
scaffold0778 (1-41)||(821-860)
[»] scaffold0515 (1 HSPs)
scaffold0515 (1-45)||(2477-2520)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-45)||(9366-9409)
[»] scaffold0402 (1 HSPs)
scaffold0402 (1-45)||(1327-1370)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-45)||(2477-2520)
[»] scaffold0287 (1 HSPs)
scaffold0287 (1-45)||(1144-1187)
[»] scaffold0179 (1 HSPs)
scaffold0179 (2-50)||(4102-4149)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-45)||(90568-90611)


Alignment Details
Target: chr8 (Bit Score: 105; Significance: 1e-52; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 46 - 222
Target Start/End: Original strand, 33692057 - 33692230
Alignment:
Q  46 tgcattattgtatttctagttcaatcaaaacttgggaaaatggaatggttaggactaatataatttatctcatatcatcacaatctcttattg--ttttt 143  Q
    |||||||||| ||||||||||||||||||||||||||||||||     ||||| |||||||||||||||||||||||||||||||||||||||  |||||    
T  33692057 tgcattattgcatttctagttcaatcaaaacttgggaaaatgg-----ttaggtctaatataatttatctcatatcatcacaatctcttattgttttttt 33692151  T
Q  144 tatgtttttgaagaagttaaattagtcaatccaaattggtag-cggagaattgagggaaaacagttaggactagtataat 222  Q
    |||||||||||| ||||||||||||||||||||||||| |||  || ||||||| || ||||||||||||||||||||||    
T  33692152 tatgtttttgaaaaagttaaattagtcaatccaaattgatagaaggggaattga-ggcaaacagttaggactagtataat 33692230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27849828 - 27849872
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  27849828 ctaacaatttcggcatttttgtcagttgagttaggacttctggat 27849872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12321029 - 12320991
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  12321029 ctaacaattttgacatttttgtcagttgagctaggactt 12320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25063382 - 25063336
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattg 47  Q
    |||||||||||| |||||||| ||||||| |||||||||||||||||    
T  25063382 ctaacaatttcggcatttttgccagttgaactaggacttctggattg 25063336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16816868 - 16816827
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctg 42  Q
    ||||||||||||||||||||| |||||||||||||| |||||    
T  16816868 ctaacaatttcgacatttttgccagttgagctaggagttctg 16816827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5704714 - 5704757
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||    
T  5704714 ctaacaatttcgacatttt-gtcagttgagctaggacttgtggat 5704757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14188132 - 14188089
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | |||||||||||||||||||||||    
T  14188132 ctaacaatttcgacatttt-gccagttgagctaggacttctggat 14188089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29845170 - 29845214
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||    
T  29845170 ctaacaatttcgatatttttgccagttgaactaggacttctggat 29845214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 33692214 - 33692250
Alignment:
Q  93 gttaggactaatataatttatctcatatcatcacaat 129  Q
    |||||||||| ||||||||||||||||||||||||||    
T  33692214 gttaggactagtataatttatctcatatcatcacaat 33692250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 3673929 - 3673964
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctagga 36  Q
    ||||||||||||||||||||| ||||||||||||||    
T  3673929 ctaacaatttcgacatttttgccagttgagctagga 3673964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5917324 - 5917286
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||| |||||||||||||||||||||| |||||||||    
T  5917324 ctaacagtttcgacatttttgtcagttgaactaggactt 5917286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11637638 - 11637676
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  11637638 ctaacaatttcgacattttttccagttgagctaggactt 11637676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24242671 - 24242717
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattg 47  Q
    |||||||||||| |||||||| | |||||| ||||||||||||||||    
T  24242671 ctaacaatttcggcatttttgccggttgagttaggacttctggattg 24242717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27928200 - 27928155
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattg 47  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||    
T  27928200 ctaacaatttcggcatttt-gccagttgagctaggacttctggattg 27928155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40744328 - 40744373
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattg 47  Q
    |||||||||| |||||||| | |||||||||||||||||||||||||    
T  40744328 ctaacaattttgacatttt-gccagttgagctaggacttctggattg 40744373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5895881 - 5895925
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  5895881 ctaacaatttcgacatttt-gccagttgagctaggacttatggatt 5895925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6317342 - 6317298
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  6317342 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 6317298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28372516 - 28372471
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  28372516 ctaacaatttcaacatctttgtcagtagagctaggacttgtggatt 28372471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34711641 - 34711685
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  34711641 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 34711685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2442804 - 2442761
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||    
T  2442804 ctaacaatttcgacatttt-gccagttgagctaggacttatggat 2442761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2733658 - 2733615
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  2733658 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 2733615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3728412 - 3728455
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||    
T  3728412 ctaacaatttcgatatttt-gtcagttgagctgggacttctggat 3728455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4312175 - 4312132
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  4312175 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 4312132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4430821 - 4430864
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  4430821 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 4430864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4694773 - 4694816
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||    
T  4694773 ctaacaatttcgacatttt-gccagttgagctaggacttatggat 4694816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4977120 - 4977163
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  4977120 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 4977163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8547216 - 8547259
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  8547216 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 8547259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10096654 - 10096615
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  10096654 ctaacaatttcgacatttt-gccagttgagctaggacttct 10096615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10286551 - 10286594
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||| |||||||| | |||||||||||||||||||||||    
T  10286551 ctaacaattttgacatttt-gccagttgagctaggacttctggat 10286594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10457149 - 10457181
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagcta 33  Q
    |||||||||||||||||||| ||||||||||||    
T  10457149 ctaacaatttcgacatttttatcagttgagcta 10457181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11098160 - 11098203
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||    
T  11098160 ctaacaatttcgatatttt-gtcagttgagttaggacttctggat 11098203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11100374 - 11100417
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||  |||||||||||||||||||||||    
T  11100374 ctaacaatttcggcatttttc-cagttgagctaggacttctggat 11100417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11265142 - 11265185
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||| |||||||| ||||||||| |||||||||||||||    
T  11265142 ctaacaattttgacatttt-gtcagttgaactaggacttctggat 11265185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27545002 - 27545045
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | |||||||||||| ||||||||||    
T  27545002 ctaacaatttcgacatttt-gccagttgagctagaacttctggat 27545045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35421704 - 35421747
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | ||||||| |||||||||||||||    
T  35421704 ctaacaatttcgacatttt-gccagttgaactaggacttctggat 35421747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36586524 - 36586481
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  36586524 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 36586481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38070567 - 38070610
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  38070567 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 38070610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41562484 - 41562441
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||||||||||   |||||||||||||||||||||||    
T  41562484 ctaacaatttcgacattttac-cagttgagctaggacttctggat 41562441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7607326 - 7607376
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattgcatt 51  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  7607326 ctaacaatttcgacatttttgtcaattgagctaggacttctggattacatt 7607376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37103364 - 37103326
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37103364 ctaacaatttcgacatttttgtcagttgagctaggactt 37103326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44948061 - 44948018
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  44948061 ctaacaatttcgacatttt-gtcagttgagctaggacttctggat 44948018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35706894 - 35706849
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattg 47  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||    
T  35706894 ctaacaatttcgacatttt-gccagttgagctaggacttctggattg 35706849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11543885 - 11543926
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctg 42  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  11543885 ctaacaatttcggcatttttgccagttgagctaggacttctg 11543926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 433180 - 433137
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||    
T  433180 ctaacaatttcgacatttt-gtcagttgagttaggacttctggat 433137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 727375 - 727418
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| |||||||||||||||||||||||||    
T  727375 ctaacaatttcggcatttt-gtcagttgagctaggacttctggat 727418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19134602 - 19134646
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||    
T  19134602 ctaacaatttcgacattttttccagttgagctaggacttatggat 19134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 21840536 - 21840577
Alignment:
Q  2 taacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  21840536 taacaatttcgacattt--gtcagttgagctaggacttctggat 21840577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30854821 - 30854865
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||    
T  30854821 ctaacaatttcgacatttttatcagttgagttaggacttgtggat 30854865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35476576 - 35476619
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | |||||||||||||||||||||||    
T  35476576 ctaacaatttcgacatttt-gccagttgagctaggacttctggat 35476619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2287395 - 2287441
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattgc 48  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||||    
T  2287395 ctaacaatttcggcatttt-gccagttgagctaggacttctggattgc 2287441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 33
Target Start/End: Complemental strand, 9993211 - 9993180
Alignment:
Q  2 taacaatttcgacatttttgtcagttgagcta 33  Q
    ||||||||||||||||||||||||||||||||    
T  9993211 taacaatttcgacatttttgtcagttgagcta 9993180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32517904 - 32517942
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  32517904 ctaacaatttcgacatttttatcagttgaactaggactt 32517942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34667086 - 34667041
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattg 47  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||    
T  34667086 ctaacaatttcggcatttt-gccagttgagctaggacttctggattg 34667041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20251571 - 20251615
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  20251571 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 20251615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23080184 - 23080228
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  23080184 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 23080228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23957094 - 23957042
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattgcattatt 54  Q
    ||||||||||||||||||| | |||||||||||| |||||||||| | ||||||    
T  23957094 ctaacaatttcgacatttt-gccagttgagctagaacttctggataggattatt 23957042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29741044 - 29741088
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||    
T  29741044 ctaataatttcgacatttttc-cagttgagctaggacttctggatt 29741088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32023294 - 32023250
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  32023294 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 32023250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40812059 - 40812015
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| |||||||||| |||||||||||||||    
T  40812059 ctaacaatttcggcatttt-gtcagttgaggtaggacttctggatt 40812015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42160343 - 42160387
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  42160343 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 42160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4014899 - 4014942
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| ||||||||||||||||||| |||||    
T  4014899 ctaacaatttcggcatttt-gtcagttgagctaggacttgtggat 4014942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13268061 - 13268104
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  13268061 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 13268104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15897256 - 15897213
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  15897256 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 15897213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16535029 - 16535072
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||||||||||  |||||||| |||||||||||||||    
T  16535029 ctaacaatttcgacatttta-tcagttgaactaggacttctggat 16535072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33607085 - 33607042
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  33607085 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 33607042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35687872 - 35687915
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||    
T  35687872 ctaacaatttcggcatttta-tcagttgagctaggacttctggat 35687915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36754827 - 36754870
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  36754827 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 36754870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38490486 - 38490529
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  38490486 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 38490529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39417485 - 39417449
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggac 37  Q
    ||||||||||||  |||||||||||||||||||||||    
T  39417485 ctaacaatttcggtatttttgtcagttgagctaggac 39417449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40592355 - 40592312
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  40592355 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 40592312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41164734 - 41164777
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||| ||| | |||||||||||||||||||||||    
T  41164734 ctaacaatttcgacacttt-gccagttgagctaggacttctggat 41164777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42007301 - 42007344
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||||||||||   |||||||||||||||||||||||    
T  42007301 ctaacaatttcgacattttac-cagttgagctaggacttctggat 42007344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 45049427 - 45049384
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||    
T  45049427 ctaacaatttcgacatttt-gccagttgagctaagacttctggat 45049384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33228742 - 33228697
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  33228742 ctaacaatttcgacatttttgccagttgagctaggacttctggatt 33228697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40013306 - 40013262
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  40013306 ctaacaatttcggcatttttgtcagttgagctaggacttctggat 40013262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 47086386 - 47086430
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  47086386 ctaacaatttcgacatttttgtcagttgagctaggacttatggat 47086430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30627666 - 30627630
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggac 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  30627666 ctaacaatttcgacatttttgtcagttgagctaggac 30627630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6030724 - 6030762
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  6030724 ctaacaatttcgacatttttgttagttgagctaggactt 6030762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24333383 - 24333345
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  24333383 ctaacaatttcgacatttttgtaagttgagctaggactt 24333345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38261043 - 38261003
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctg 42  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  38261043 ctaacaatttcgacatttt-gtcagttgagctaggacttctg 38261003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9380033 - 9379990
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | |||||||||||||||||||||||    
T  9380033 ctaacaatttcgacatttt-gccagttgagctaggacttctggat 9379990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37117931 - 37117974
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||    
T  37117931 ctaacaatttcaacatttt-gtcagttgagctaggacttctggat 37117974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46715776 - 46715816
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    |||||||||||||||||||| ||||||||| ||||||||||    
T  46715776 ctaacaatttcgacatttttttcagttgagttaggacttct 46715816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 46021517 - 46021555
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  46021517 ctaacaatttcggcatttttatcagttgagctaggactt 46021555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43188572 - 43188527
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||||| || ||||||||| |||||||||||    
T  43188572 ctaacaatttcggcatttttgccacttgagctagtacttctggatt 43188527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 48612559 - 48612515
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  48612559 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 48612515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 48729770 - 48729814
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  48729770 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 48729814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 788932 - 788975
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| ||||||||||||||| |||||||||    
T  788932 ctaacaatttcggcatttt-gtcagttgagctagggcttctggat 788975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1869858 - 1869818
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    |||||||| ||| |||||||| |||||||||||||||||||    
T  1869858 ctaacaatatcggcatttttgccagttgagctaggacttct 1869818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2228166 - 2228209
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||    
T  2228166 ctaacaatttcgacatttt-gccagttgagctacgacttctggat 2228209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2354883 - 2354926
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  2354883 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 2354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3497603 - 3497646
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  3497603 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 3497646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4887599 - 4887642
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  4887599 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 4887642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34708716 - 34708676
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    |||||||| ||| |||||||| |||||||||||||||||||    
T  34708716 ctaacaatatcggcatttttgccagttgagctaggacttct 34708676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35157170 - 35157213
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  35157170 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 35157213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 45236972 - 45236929
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  45236972 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 45236929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 47584757 - 47584800
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||| |||||||||| | |||||||||||||||||||||||    
T  47584757 ctaacaatgtcgacatttt-gccagttgagctaggacttctggat 47584800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13632132 - 13632088
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  13632132 ctaacaatttcgacatttttgccagttgagctaggacttctggat 13632088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13849398 - 13849360
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13849398 ctaacaatttcgacatttttgtcagttgagctaggactt 13849360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35273392 - 35273437
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  35273392 ctaacaatttcgacatttttgccagttgagctaggacttgtggatt 35273437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 55853400 - 55853452
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattgcattat 53  Q
    |||||||||| | |||||||| ||||||||||||||||||||||||| |||||    
T  55853400 ctaacaattttggcatttttgccagttgagctaggacttctggattgtattat 55853452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4431977 - 4432032
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattgcattattgt 56  Q
    |||| ||||| |||||||||| ||||||||||||||||| |||| |||||||||||    
T  4431977 ctaataattttgacatttttgccagttgagctaggacttgtggactgcattattgt 4432032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 41293148 - 41293185
Alignment:
Q  2 taacaatttcgacatttttgtcagttgagctaggactt 39  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  41293148 taacaatttcgacatttttgtcagttgagctagaactt 41293185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49319773 - 49319730
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  49319773 ctaacaatttcgacatttt-gttagttgagctaggacttctggat 49319730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 51969146 - 51969103
Alignment:
Q  139 ttttttatgtttttgaagaagttaaattagtcaatccaaattgg 182  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||    
T  51969146 ttttttattttttttaagaagttaaattagtccatccaaattgg 51969103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12821207 - 12821162
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattg 47  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||    
T  12821207 ctaacaatttcggcatttt-gccagttgagctaggacttctggattg 12821162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24870639 - 24870601
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  24870639 ctaacaatttcggcatttttgccagttgagctaggactt 24870601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37340193 - 37340231
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  37340193 ctaacaatttcgacatttttatcagttgaactaggactt 37340231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 46343371 - 46343333
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||| || |||||||||||||||||||||||    
T  46343371 ctaacaatttcggcacttttgtcagttgagctaggactt 46343333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 50981784 - 50981822
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  50981784 ctaacaatttcggcatttttgtcagttgagttaggactt 50981822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3802997 - 3803042
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||| ||||||| ||||||||||||||||| |||||||| ||||||    
T  3802997 ctaataatttcggcatttttgtcagttgagttaggacttatggatt 3803042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8810855 - 8810896
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctg 42  Q
    |||| ||||||| |||||||||||||||||||||||| ||||    
T  8810855 ctaataatttcggcatttttgtcagttgagctaggacatctg 8810896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 14285122 - 14285093
Alignment:
Q  17 ttttgtcagttgagctaggacttctggatt 46  Q
    ||||||||||||||||||||||||||||||    
T  14285122 ttttgtcagttgagctaggacttctggatt 14285093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17480974 - 17480929
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||| | ||||||||||||||||||||| |||| ||||||    
T  17480974 ctaacaattttggcatttttgtcagttgagctagaacttgtggatt 17480929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23974728 - 23974772
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  23974728 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 23974772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24712130 - 24712086
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  24712130 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 24712086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42154224 - 42154268
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  42154224 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 42154268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1982603 - 1982560
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  1982603 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 1982560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3084328 - 3084371
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  3084328 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 3084371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4379349 - 4379306
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| ||||||||| |||||||||||||||    
T  4379349 ctaacaatttcggcatttt-gtcagttgaactaggacttctggat 4379306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5060496 - 5060539
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||    
T  5060496 ctaacaatttcgacatttta-tcagttgagttaggacttctggat 5060539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5397026 - 5397069
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  5397026 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 5397069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9569517 - 9569474
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  9569517 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 9569474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12316016 - 12316059
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||| |||||||||||||| |||||||||||||| |||||||||    
T  12316016 ctaactatttcgacattttt-tcagttgagctagggcttctggat 12316059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 12694550 - 12694522
Alignment:
Q  17 ttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||||||||||||||||||||    
T  12694550 ttttgtcagttgagctaggacttctggat 12694522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28187250 - 28187289
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  28187250 ctaacaatttcgacatttta-tcagttgagctaggacttct 28187289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29894452 - 29894409
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||| |||||||||||||| | |||||||||||||||||||||||    
T  29894452 ctaataatttcgacatttt-gccagttgagctaggacttctggat 29894409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30044670 - 30044713
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  30044670 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 30044713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31263587 - 31263630
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||| |||||||||||||| | |||||||||||||||||||||||    
T  31263587 ctaataatttcgacatttt-gccagttgagctaggacttctggat 31263630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36752401 - 36752358
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| |||||||||| ||||||||||||||    
T  36752401 ctaacaatttcggcatttt-gtcagttgagttaggacttctggat 36752358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42856605 - 42856562
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  42856605 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 42856562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 46488203 - 46488246
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  46488203 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 46488246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49535927 - 49535884
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  49535927 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 49535884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49882795 - 49882838
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  49882795 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 49882838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11029706 - 11029662
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  11029706 ctaacaatttcgacatttttgccagttgagctaggacttctggat 11029662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28171065 - 28171109
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  28171065 ctaacaatttcggcatttttgccagttgagctaggacttctggat 28171109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 37278622 - 37278658
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggac 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  37278622 ctaacaatttcgacatttttgtcagttgagctaggac 37278658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10071602 - 10071645
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctgga 44  Q
    |||||||||| |||||||||||||||||||||||||||| ||||    
T  10071602 ctaacaattttgacatttttgtcagttgagctaggacttgtgga 10071645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 47410838 - 47410883
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattg 47  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||    
T  47410838 ctaacaatttcgacatttt-gccagttgagctaggacttctggattg 47410883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 53584003 - 53583958
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattg 47  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||    
T  53584003 ctaacaatttcgacatttt-gccagttgagctaggacttctggattg 53583958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43904581 - 43904622
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctg 42  Q
    |||||||||||||||||||| ||||||||||||| |||||||    
T  43904581 ctaacaatttcgacatttttttcagttgagctagaacttctg 43904622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 46894855 - 46894811
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  46894855 ctaacaatttcgatatttt-gtcagttgagctaggacttctggatt 46894811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11751254 - 11751210
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||| ||||||||||||||||| |||||    
T  11751254 ctaacaatttcggcatttttgccagttgagctaggacttatggat 11751210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19961411 - 19961368
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||    
T  19961411 ctaacaatttcgacatttt-gtcagttgagttaggacttctggat 19961368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27396896 - 27396853
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| |||||||||||||||||||||||||    
T  27396896 ctaacaatttcggcatttt-gtcagttgagctaggacttctggat 27396853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28266568 - 28266525
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| |||||||||||||||||||||||||    
T  28266568 ctaacaatttcggcatttt-gtcagttgagctaggacttctggat 28266525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38085848 - 38085805
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||    
T  38085848 ctaacaatttcgacatttt-gtcagttgagctaggatttctggat 38085805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38127928 - 38127971
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | |||||||||||||||||||||||    
T  38127928 ctaacaatttcgacatttt-gccagttgagctaggacttctggat 38127971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40840211 - 40840171
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  40840211 ctaacaatttcggcatttttgccagttgagctaggacttct 40840171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47069049 - 47069005
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||    
T  47069049 ctaacaatttcggcatttttgccagttgagctaagacttctggat 47069005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37928880 - 37928837
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctgga 44  Q
    |||||||||| |||||||||||||||||||||| ||||| ||||    
T  37928880 ctaacaattttgacatttttgtcagttgagctaagacttgtgga 37928837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38485584 - 38485537
Alignment:
Q  1 ctaacaatttcgacatttttgt-cagttgagctaggacttctggattg 47  Q
    |||||||||| ||||||||| | |||||||||||||||||||||||||    
T  38485584 ctaacaattttgacatttttttacagttgagctaggacttctggattg 38485537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7251625 - 7251663
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  7251625 ctaacaatttcggcatttttgtcagttgagttaggactt 7251663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9583509 - 9583555
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattg 47  Q
    |||||||||||| |||||||| ||||||||||| | |||||||||||    
T  9583509 ctaacaatttcggcatttttgccagttgagctaaggcttctggattg 9583555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32961064 - 32961109
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattg 47  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||    
T  32961064 ctaacaatttcggcatttt-gccagttgagctaggacttctggattg 32961109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50238926 - 50238975
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattgcatt 51  Q
    |||||||||||||||||||   |||||||||||||||||||| ||||||||    
T  50238926 ctaacaatttcgacattttac-cagttgagctaggacttctgaattgcatt 50238975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3917808 - 3917764
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  3917808 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 3917764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4232263 - 4232307
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  4232263 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 4232307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24657453 - 24657409
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| |||||||||| |||||||||||||||    
T  24657453 ctaacaatttcggcatttt-gtcagttgagttaggacttctggatt 24657409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44037530 - 44037574
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  44037530 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 44037574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2687601 - 2687558
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  2687601 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 2687558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4833195 - 4833238
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  4833195 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 4833238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6583321 - 6583364
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  6583321 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 6583364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8381121 - 8381078
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  8381121 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 8381078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8792815 - 8792859
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||  | |||||||||||||||||||||    
T  8792815 ctaacaatttcggcatttttaccggttgagctaggacttctggat 8792859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8826667 - 8826624
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||    
T  8826667 ctaacaatttcggcatttt-gtccgttgagctaggacttctggat 8826624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13525211 - 13525168
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  13525211 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 13525168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24910374 - 24910417
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  24910374 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 24910417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28731889 - 28731850
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  28731889 ctaacaatttcgacatttt-gtcagttgagctagaacttct 28731850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30553054 - 30553097
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  30553054 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 30553097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30703133 - 30703093
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    ||||||||||||| ||||||| || ||||||||||||||||    
T  30703133 ctaacaatttcgatatttttgccaattgagctaggacttct 30703093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32591014 - 32590971
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||||||||||   |||||||||||||||||||||||    
T  32591014 ctaacaatttcgacattttac-cagttgagctaggacttctggat 32590971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40559716 - 40559673
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||    
T  40559716 ctaacaatttcggcatttta-tcagttgagctaggacttctggat 40559673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41464706 - 41464663
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  41464706 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 41464663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43898049 - 43898092
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||    
T  43898049 ctaacaatttcggcatttt-gtctgttgagctaggacttctggat 43898092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 46838813 - 46838856
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||  |||||||||||||||||||||||    
T  46838813 ctaacaatttcggcatttttc-cagttgagctaggacttctggat 46838856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49285550 - 49285507
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||    
T  49285550 ctaacaatttcgacatttt-gtcagtggagttaggacttctggat 49285507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 52256838 - 52256878
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    |||||||| |||||||||||| |||||||||||| ||||||    
T  52256838 ctaacaatatcgacatttttgccagttgagctagaacttct 52256878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23074730 - 23074775
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  23074730 ctaacaatttcggcatttttgccagttgagctaggacttctggatt 23074775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 972680 - 972720
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  972680 ctaacaatttcgacatttttgtcagttgaactaggacttct 972720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1269605 - 1269648
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  1269605 ctaacaatttcgacatttt-gtcagttgagctaggacttctggat 1269648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21728703 - 21728659
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  21728703 ctaacaatttcggcatttttgccagttgagctaggacttctggat 21728659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 9599353 - 9599319
Alignment:
Q  2 taacaatttcgacatttttgtcagttgagctagga 36  Q
    |||||||||||||||||||||||||||||||||||    
T  9599353 taacaatttcgacatttttgtcagttgagctagga 9599319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22620737 - 22620782
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattg 47  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||    
T  22620737 ctaacaatttcggcatttt-gtcagttgagctaggacttctggattg 22620782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1612415 - 1612371
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||    
T  1612415 ctaacaatttcaacatttttgtcagttgagcaaggacttgtggat 1612371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1833405 - 1833449
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||    
T  1833405 ctaacaatttcggcatttttgccagttgagctatgacttctggat 1833449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40318871 - 40318915
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||    
T  40318871 ctaacaatttcggcatttttgccagttgagctatgacttctggat 40318915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41408669 - 41408625
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||    
T  41408669 ctaacaatttcggcatttttgccagttgagctatgacttctggat 41408625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42448253 - 42448210
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | |||||||||||||||||||||||    
T  42448253 ctaacaatttcgacatttt-gccagttgagctaggacttctggat 42448210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7179387 - 7179432
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggattg 47  Q
    ||||||||||||||||||| | |||||||||||| ||||||||||||    
T  7179387 ctaacaatttcgacatttt-gccagttgagctagaacttctggattg 7179432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8595573 - 8595611
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  8595573 ctaacaatttcggcatttttgccagttgagctaggactt 8595611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22792196 - 22792234
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  22792196 ctaacaatttcggcatttttgccagttgagctaggactt 22792234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1244267 - 1244311
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  1244267 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 1244311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4617852 - 4617896
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||||||||||   ||||||||||||||||||||||||    
T  4617852 ctaacaatttcgacattttac-cagttgagctaggacttctggatt 4617896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12707962 - 12708006
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  12707962 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 12708006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16496642 - 16496598
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||||    
T  16496642 ctaacaatttcgacatttt-gccagttgaactaggacttctggatt 16496598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17869210 - 17869254
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  17869210 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 17869254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18473956 - 18473912
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  18473956 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 18473912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19836173 - 19836213
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctg 42  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  19836173 ctaacaatttcgacatttt-gccagttgagctaggacttctg 19836213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 19949572 - 19949605
Alignment:
Q  148 tttttgaagaagttaaattagtcaatccaaattg 181  Q
    ||||||||||||||||||||||| ||||||||||    
T  19949572 tttttgaagaagttaaattagtctatccaaattg 19949605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23311259 - 23311303
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  23311259 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 23311303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37940960 - 37940916
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||    
T  37940960 ctaacaatttcgacatttt-gccagttgagctaggacttctagatt 37940916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41562500 - 41562456
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  41562500 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 41562456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1277480 - 1277436
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||| ||| ||||||||||||| |||||    
T  1277480 ctaacaatttcggcatttttggcagctgagctaggacttgtggat 1277436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2103068 - 2103025
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  2103068 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 2103025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4165001 - 4164958
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  4165001 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 4164958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5203593 - 5203549
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||||| |  |||||||| |||||||||||    
T  5203593 ctaacaatttcgacatttttgcctcttgagctaagacttctggat 5203549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6029654 - 6029611
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||| |||||||| | |||||||||||||||||||||||    
T  6029654 ctaacaattttgacatttt-gccagttgagctaggacttctggat 6029611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6053137 - 6053176
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  6053137 ctaacaatttcggcatttt-gtcagttgagctaggacttct 6053176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6672283 - 6672240
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  6672283 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 6672240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 11462777 - 11462741
Alignment:
Q  3 aacaatttcgacatttttgtcagttgagctaggactt 39  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  11462777 aacaatttcgatatttttgccagttgagctaggactt 11462741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11968818 - 11968775
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||    
T  11968818 ctaacaatttcgacatttt-gacagttgagttaggacttctggat 11968775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12878204 - 12878247
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  12878204 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 12878247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15067226 - 15067270
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||||  || ||||||||||| ||||||||    
T  15067226 ctaacaatttcgacattttttccaattgagctaggaattctggat 15067270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 17080506 - 17080467
Alignment:
Q  2 taacaatttcgacatttttgtcagttgagctaggacttctg 42  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  17080506 taacaatttcgacatttt-gtcagttgagctacgacttctg 17080467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24652400 - 24652443
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||    
T  24652400 ctaacaatttcgacatttt-gccagttgagttaggacttctggat 24652443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28143318 - 28143361
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  28143318 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 28143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28489225 - 28489181
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||| ||||||| |||||||||||||||| |||||||||| ||||    
T  28489225 ctaataatttcggcatttttgtcagttgaactaggacttccggat 28489181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36185179 - 36185136
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | |||||||||||||| ||||||||    
T  36185179 ctaacaatttcgacatttt-gccagttgagctaggatttctggat 36185136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36569321 - 36569278
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  36569321 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 36569278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36727031 - 36726988
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  36727031 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 36726988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 39143483 - 39143440
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||    
T  39143483 ctaacaatttcgacatttt-gccagttgagctaggacttgtggat 39143440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39151012 - 39151055
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||||||||||   |||||||||||||||||||||||    
T  39151012 ctaacaatttcgacattttac-cagttgagctaggacttctggat 39151055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2018848 - 2018892
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  2018848 ctaacaatttcgacatttttaccagttgagctaggacttctggat 2018892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16496738 - 16496782
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  16496738 ctaacaatttcggcatttttgccagttgagctaggacttctggat 16496782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9297799 - 9297761
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  9297799 ctaacaatttcgacatttttgtcagttgaactaggactt 9297761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9727537 - 9727499
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  9727537 ctaacaatttcgacatttttgtcagttgaactaggactt 9727499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24571703 - 24571747
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||    
T  24571703 ctaacaatttcgacattttt-tcagttgagctaggacttctagatt 24571747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31444376 - 31444421
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||||| | ||||||||||||||||||||||    
T  31444376 ctaacaatttcggcatttttgccggttgagctaggacttctggatt 31444421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 4996899 - 4996870
Alignment:
Q  17 ttttgtcagttgagctaggacttctggatt 46  Q
    ||||||||||||||||||||||||||||||    
T  4996899 ttttgtcagttgagctaggacttctggatt 4996870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21513114 - 21513074
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctg 42  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  21513114 ctaacaatttcgacatttt-gccagttgagctaggacttctg 21513074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2314685 - 2314728
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  2314685 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 2314728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4083629 - 4083586
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  4083629 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 4083586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7098848 - 7098805
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||||||||||   |||||||||||||||||||||||    
T  7098848 ctaacaatttcgacattttac-cagttgagctaggacttctggat 7098805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8448228 - 8448271
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  8448228 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 8448271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8457032 - 8457075
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  8457032 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 8457075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8939668 - 8939625
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  8939668 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 8939625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10181087 - 10181044
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  10181087 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 10181044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10330847 - 10330803
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||| | |||||||| ||||||||||||||||| |||||    
T  10330847 ctaacaattttggcatttttgccagttgagctaggacttgtggat 10330803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10531428 - 10531385
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||    
T  10531428 ctaacaatttcgatatttt-gtcagttgagctagaacttctggat 10531385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17534609 - 17534652
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  17534609 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 17534652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31205269 - 31205312
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  31205269 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 31205312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 270407 - 270451
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  270407 ctaacaatttcggcatttttgccagttgagctaggacttctggat 270451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10430425 - 10430463
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  10430425 ctaacaatttcggcatttttgtcagttgagctaggactt 10430463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 236612 - 236575
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggact 38  Q
    |||||||||||||||||||||||||||||| |||||||    
T  236612 ctaacaatttcgacatttttgtcagttgaggtaggact 236575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25821036 - 25821080
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||||||||||  |||||||||||||||||||||||||    
T  25821036 ctaacaatttcgacatttta-tcagttgagctaggacttctggatt 25821080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8050524 - 8050480
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||    
T  8050524 ctaacaatttcgacatttttgtcggttgagctaagacttatggat 8050480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30455246 - 30455203
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  30455246 ctaacaatttcgacatttta-tcagttgagctaggacttctggat 30455203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40685571 - 40685528
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | |||||||||||||||||||||||    
T  40685571 ctaacaatttcgacatttt-gccagttgagctaggacttctggat 40685528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49948283 - 49948240
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | |||||||||||||||||||||||    
T  49948283 ctaacaatttcgacatttt-gccagttgagctaggacttctggat 49948240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 50248071 - 50248028
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  50248071 ctaacaatttcgacatttta-tcagttgagctaggacttctggat 50248028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4628050 - 4628088
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  4628050 ctaacaatttcagcatttttgtcagttgagctaggactt 4628088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7204594 - 7204632
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  7204594 ctaacaatttcggcatttttgccagttgagctaggactt 7204632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7267910 - 7267948
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  7267910 ctaacaatttcgacatttttgtaagttgagttaggactt 7267948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8312614 - 8312652
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  8312614 ctaacaatttcgacatttttgtccgttgaactaggactt 8312652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26856834 - 26856796
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  26856834 ctaacaatttcgacatttttgtcagttgaggtagaactt 26856796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32947662 - 32947624
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  32947662 ctaacaattttaacatttttgtcagttgagctaggactt 32947624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43841864 - 43841902
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  43841864 ctaacaatttcgacatttttatcagttgagttaggactt 43841902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 45611547 - 45611585
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggactt 39  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  45611547 ctaacaatttcggcatttttgtcagttgagctagaactt 45611585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5598343 - 5598299
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||    
T  5598343 ctaacaatttcggcatttttc-cagttgagctaggacttctggatt 5598299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21897767 - 21897807
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctg 42  Q
    ||||||||||||||||||| |||||||||||||||| |||||    
T  21897767 ctaacaatttcgacatttt-gtcagttgagctaggatttctg 21897807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40809299 - 40809343
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  40809299 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 40809343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43676110 - 43676154
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  43676110 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 43676154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 48314209 - 48314165
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  48314209 ctaacaatttcggcatttt-gccagttgagctaggacttctggatt 48314165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3840448 - 3840487
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  3840448 ctaacaatttcgacatttt-gccagttgagctaggacttct 3840487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 4126602 - 4126574
Alignment:
Q  17 ttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||||||||||||||||||||    
T  4126602 ttttgtcagttgagctaggacttctggat 4126574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8214665 - 8214622
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||| ||||||  |||||||||||||||||||||||    
T  8214665 ctaacaatttcgatatttttc-cagttgagctaggacttctggat 8214622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10635531 - 10635488
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  10635531 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 10635488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 13116968 - 13116932
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggac 37  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  13116968 ctaacaatttcgacatttttgttagttgaggtaggac 13116932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19338264 - 19338307
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  19338264 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 19338307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23225376 - 23225420
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||| |||||||||  ||||||||||||||||| |||||    
T  23225376 ctaacaattttgacatttttaccagttgagctaggacttgtggat 23225420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28999416 - 28999373
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  28999416 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 28999373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29005132 - 29005089
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  29005132 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 29005089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34010136 - 34010093
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||    
T  34010136 ctaacaatttcgacatttt-gccagttgagctaagacttctggat 34010093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39606447 - 39606407
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    |||||||| ||| |||||||| |||||||||||||||||||    
T  39606447 ctaacaatatcggcatttttgccagttgagctaggacttct 39606407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40503639 - 40503596
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||||    
T  40503639 ctaacaatttcaacatttt-gtcagttgagctagaacttctggat 40503596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40958660 - 40958703
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  40958660 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 40958703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42631071 - 42631114
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  42631071 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 42631114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43025928 - 43025885
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||    
T  43025928 ctaacaatttcgatatttt-gtcagttgaactaggacttctggat 43025885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48391998 - 48391955
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  48391998 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 48391955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48731842 - 48731881
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  48731842 ctaacaatttcggcatttt-gtcagttgagctaggacttct 48731881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 195783 - 195738
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggatt 46  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||    
T  195783 ctaacaatttcgacatttttgctagttgaactaggacttctggatt 195738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 160490 - 160446
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||||  |||||||||||||||||||||||    
T  160490 ctaacaatttcggcatttttaccagttgagctaggacttctggat 160446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 860 - 821
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttct 41  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  860 ctaacaatttcgacatttt-gccagttgagctaggacttct 821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2520 - 2477
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| |||||||||| || |||||||||||    
T  2520 ctaacaatttcgacatttt-gtcagttgagttatgacttctggat 2477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9409 - 9366
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  9409 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 9366  T

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Target: scaffold0402 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1327 - 1370
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  1327 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 1370  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2520 - 2477
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    ||||||||||||||||||| |||||||||| || |||||||||||    
T  2520 ctaacaatttcgacatttt-gtcagttgagttatgacttctggat 2477  T

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Target: scaffold0287 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1144 - 1187
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  1144 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 1187  T

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Target: scaffold0179 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 4102 - 4149
Alignment:
Q  2 taacaatttcgacatttttgtcagttgagctaggacttctggattgcat 50  Q
    ||||||||||| |||||| | ||||||||||||||||||||||| ||||    
T  4102 taacaatttcggcatttt-gccagttgagctaggacttctggatagcat 4149  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 90611 - 90568
Alignment:
Q  1 ctaacaatttcgacatttttgtcagttgagctaggacttctggat 45  Q
    |||||||||||| |||||| | |||||||||||||||||||||||    
T  90611 ctaacaatttcggcatttt-gccagttgagctaggacttctggat 90568  T

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