View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2602_high_37 (Length: 255)
Name: NF2602_high_37
Description: NF2602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2602_high_37 |
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| [»] scaffold0041 (1 HSPs) |
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Alignment Details
Target: scaffold0041 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 56 - 248
Target Start/End: Original strand, 12936 - 13128
Alignment:
| Q |
56 |
acacattgtcggaacaagttggttttatattaaatgagaaatataagcactagcattcaaaatatataaactgtctatgtgtatctctattaaactaaac |
155 |
Q |
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| T |
12936 |
acacattgtcgggacaagttggttttatattaaatgagaaatataagcactagcattcaaaatatataaactgtctatgtgtatctctattaaactaaac |
13035 |
T |
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| Q |
156 |
aaattacacagaaaaaagaataaacaattattttgatacttaaatgtatgaggcaatgccattttaagcttcaaatatatcaaagtataatct |
248 |
Q |
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| T |
13036 |
aaattacacagaaaaaagaataaacaattattttgatacttaaatgtatgaggcaatgccattttaagcttcaaatatatcaaagtataatct |
13128 |
T |
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