View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2602_high_49 (Length: 210)
Name: NF2602_high_49
Description: NF2602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2602_high_49 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 6940094 - 6940303
Alignment:
| Q |
1 |
tcacatttctaagtagtataatcgccaacatttaagcttgtatactaaggagtacaaaacttttgatctctatgactttatcacttttcttattcatgat |
100 |
Q |
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| T |
6940094 |
tcacatttctaagtagtataatcgccaacatttaagcttgtatactaaggagtacaaaacttttgatctctatgactttatcacttttcttattcatgat |
6940193 |
T |
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| Q |
101 |
gataaaggttaatgaggaatatcaggaagaaaagggttagtgaagtttggcttatactaaataatcgatcagtgtctttttgtcattattgtacatataa |
200 |
Q |
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| T |
6940194 |
gataaaggttaatgaggaatatctggaagaaaagggttagtgatgtttggcttatactaagtaatcgatcagtgtctttttgtcattattgtacatatga |
6940293 |
T |
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| Q |
201 |
ttgaagaaac |
210 |
Q |
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| T |
6940294 |
ttgaagaaac |
6940303 |
T |
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