View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2602_low_33 (Length: 293)
Name: NF2602_low_33
Description: NF2602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2602_low_33 |
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Alignment Details
Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 274
Target Start/End: Original strand, 22415083 - 22415352
Alignment:
| Q |
17 |
cttgataaaagaccttgtcattttcttgaatttatggtaaaaacttgataaaaacttg-----------tcatgttcaatgtatattttcttgatgaaaa |
105 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |
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| T |
22415083 |
cttgataaagcaccttgtcattttcttgaatttatggtaaaaacttgataaaaacttgataacctcttgtcatgttcaatgtatattttcttgataaaaa |
22415182 |
T |
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| Q |
106 |
gaccttgtcattttctcgaaaacaaaa-cttgataaacatgtaatcattaaatccccttaaagccttaaatttcatttttcaccataaaccacacactat |
204 |
Q |
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||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
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| T |
22415183 |
caccttgtcattttctcgaaaaaaaaaacttgataaacatgtaatcattaaatccccttaaagcctttaatttcatctttcaccataaaccacacactat |
22415282 |
T |
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| Q |
205 |
gtctaatcaaaccatgcatccaccacctacaaccgatccttaccaactcctcaaaatccaccaccatccc |
274 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
22415283 |
gtctaatcaaaccatgcatccaccacctacaaccgatccttaccaactcctcaaaatccaacaccatccc |
22415352 |
T |
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