View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2602_low_41 (Length: 249)
Name: NF2602_low_41
Description: NF2602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2602_low_41 |
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Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 47645276 - 47645514
Alignment:
| Q |
1 |
cttttgcatcaggcaatactttgggggtgccattagtaaaccctttgatagtaagaaatgaacagagaacttctgagagtaacctatggcttttgccaaa |
100 |
Q |
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| T |
47645276 |
cttttgcatcaggcaatactttgggggtgccattagtaaaccctttgatagtaagaaatgaacagagaacttctgagagtaacctatggcttttgccaaa |
47645375 |
T |
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| Q |
101 |
tcctaagatgtttgatattgataaatctttagttactactccatatagaaactattcagcacatgatatggttgattttcttaaagatattggttttcct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
47645376 |
tcctaagatgtttgatattgataaatctttagttactactccatatagaaactactcagcacatgatatgattgattttcttaaagatattggttttcct |
47645475 |
T |
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| Q |
201 |
gaaggggtttatccttatgaaactcgcattttacctttg |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
47645476 |
gaaggggtttatccttatgaaactcgcattttacctttg |
47645514 |
T |
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