View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2602_low_44 (Length: 241)
Name: NF2602_low_44
Description: NF2602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2602_low_44 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 45388201 - 45387988
Alignment:
| Q |
11 |
aatgaacctccaactcttatcctcaaaggcctgagagctatcaagtaaccattatagaaagaataacatcagacttaaaataaatattccaagattgata |
110 |
Q |
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| T |
45388201 |
aatgaacctccaactcttatcctcaaaggcctgagagctatcaagtaaccattatagaaagaataacatcagacttaaaataaatattccaagattgata |
45388102 |
T |
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| Q |
111 |
ctactagtaaaaatgcattgctgttgtaggttatggatatacatacataccttgtattacctttgcaaggataggattagacaagtcctgaaaagccatt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45388101 |
ctactagtaaaaatgcattgctgttgtaggttatggatatacatacataccttgtattacctttgcaaggataggattagacaagtcctgaaaagccatt |
45388002 |
T |
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| Q |
211 |
ccacattgagttat |
224 |
Q |
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|||||||||||||| |
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| T |
45388001 |
ccacattgagttat |
45387988 |
T |
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