View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2602_low_8 (Length: 497)

Name: NF2602_low_8
Description: NF2602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2602_low_8
NF2602_low_8
[»] chr2 (32 HSPs)
chr2 (358-487)||(12693850-12693978)
chr2 (1-97)||(12693267-12693365)
chr2 (96-174)||(12693538-12693616)
chr2 (257-306)||(12693745-12693794)
chr2 (344-378)||(38935945-38935979)
chr2 (347-380)||(85695-85728)
chr2 (264-301)||(9011928-9011965)
chr2 (125-174)||(22116149-22116197)
chr2 (347-380)||(39094197-39094230)
chr2 (347-384)||(41305875-41305912)
chr2 (347-378)||(5970779-5970810)
chr2 (127-170)||(9011753-9011796)
chr2 (264-307)||(25227895-25227938)
chr2 (347-378)||(37200347-37200378)
chr2 (128-174)||(19493463-19493508)
chr2 (128-174)||(20100756-20100802)
chr2 (128-174)||(20911978-20912024)
chr2 (263-301)||(23260395-23260433)
chr2 (121-174)||(22016001-22016054)
chr2 (264-301)||(28149510-28149547)
chr2 (264-301)||(28484435-28484472)
chr2 (264-301)||(30371461-30371498)
chr2 (129-170)||(34635961-34636002)
chr2 (130-174)||(85438-85482)
chr2 (124-164)||(1902923-1902963)
chr2 (130-174)||(5157317-5157361)
chr2 (130-170)||(7894219-7894259)
chr2 (264-296)||(16577196-16577228)
chr2 (347-383)||(18048812-18048848)
chr2 (267-307)||(25926955-25926994)
chr2 (349-377)||(41089411-41089439)
chr2 (348-380)||(41859661-41859693)
[»] chr4 (31 HSPs)
chr4 (129-174)||(21246474-21246519)
chr4 (129-173)||(5401759-5401803)
chr4 (267-307)||(10717979-10718019)
chr4 (267-307)||(10931748-10931788)
chr4 (267-307)||(13334894-13334934)
chr4 (264-307)||(6439256-6439298)
chr4 (264-303)||(18454268-18454307)
chr4 (347-385)||(17800748-17800786)
chr4 (344-381)||(29248239-29248277)
chr4 (129-170)||(18454448-18454489)
chr4 (129-170)||(21798330-21798371)
chr4 (347-379)||(1386033-1386065)
chr4 (267-307)||(10682753-10682792)
chr4 (267-307)||(10682864-10682903)
chr4 (267-307)||(10896393-10896432)
chr4 (267-307)||(10896504-10896543)
chr4 (264-307)||(13910793-13910837)
chr4 (267-307)||(16482234-16482273)
chr4 (130-170)||(18320714-18320754)
chr4 (130-170)||(18454191-18454231)
chr4 (267-303)||(18454375-18454411)
chr4 (267-307)||(19875918-19875958)
chr4 (130-174)||(21780121-21780164)
chr4 (143-171)||(24670500-24670528)
chr4 (130-174)||(45274098-45274141)
chr4 (131-171)||(45900528-45900568)
chr4 (267-307)||(45900592-45900631)
chr4 (267-307)||(45900622-45900661)
chr4 (264-296)||(45900729-45900761)
chr4 (264-300)||(51965447-51965483)
chr4 (348-376)||(54130364-54130392)
[»] chr5 (27 HSPs)
chr5 (130-174)||(18229748-18229792)
chr5 (126-170)||(711232-711276)
chr5 (267-307)||(26035029-26035069)
chr5 (264-307)||(12330924-12330967)
chr5 (130-172)||(711475-711517)
chr5 (132-170)||(9227103-9227141)
chr5 (347-377)||(21149126-21149156)
chr5 (264-301)||(20688871-20688908)
chr5 (125-170)||(22642341-22642386)
chr5 (129-170)||(29754046-29754087)
chr5 (264-301)||(31861567-31861604)
chr5 (264-301)||(31861670-31861707)
chr5 (266-307)||(37204926-37204966)
chr5 (129-174)||(37204995-37205039)
chr5 (267-307)||(9227031-9227070)
chr5 (123-171)||(10331904-10331952)
chr5 (126-170)||(10976766-10976809)
chr5 (131-171)||(12330854-12330893)
chr5 (344-381)||(15060160-15060199)
chr5 (142-174)||(16504961-16504993)
chr5 (347-383)||(21148796-21148832)
chr5 (347-379)||(26035109-26035141)
chr5 (126-174)||(26720448-26720496)
chr5 (126-174)||(26990197-26990245)
chr5 (347-382)||(29104440-29104476)
chr5 (266-306)||(37204822-37204861)
chr5 (130-170)||(39153415-39153455)
[»] chr3 (27 HSPs)
chr3 (264-307)||(8355510-8355553)
chr3 (264-307)||(51252119-51252162)
chr3 (121-171)||(20956933-20956983)
chr3 (121-174)||(7226058-7226111)
chr3 (264-303)||(3548299-3548338)
chr3 (131-170)||(7118087-7118126)
chr3 (348-386)||(20957195-20957234)
chr3 (264-303)||(27432763-27432802)
chr3 (264-303)||(49872893-49872932)
chr3 (264-307)||(51252227-51252270)
chr3 (128-170)||(30586159-30586201)
chr3 (347-376)||(5416064-5416093)
chr3 (347-380)||(15309082-15309115)
chr3 (123-171)||(27432673-27432722)
chr3 (344-380)||(37977528-37977565)
chr3 (347-379)||(3072420-3072452)
chr3 (122-170)||(5205373-5205421)
chr3 (347-384)||(10616798-10616837)
chr3 (130-174)||(13439628-13439671)
chr3 (130-174)||(25110076-25110119)
chr3 (130-174)||(26770253-26770297)
chr3 (264-296)||(30271625-30271657)
chr3 (264-296)||(30271722-30271754)
chr3 (264-296)||(30586245-30586277)
chr3 (348-384)||(31173611-31173647)
chr3 (347-379)||(43767917-43767949)
chr3 (267-303)||(49872790-49872826)
[»] chr1 (22 HSPs)
chr1 (264-307)||(36343226-36343269)
chr1 (130-170)||(8620211-8620251)
chr1 (264-307)||(2059265-2059307)
chr1 (264-303)||(27794432-27794471)
chr1 (264-303)||(27794537-27794576)
chr1 (264-307)||(28724473-28724516)
chr1 (264-307)||(35167952-35167994)
chr1 (267-301)||(2059373-2059407)
chr1 (264-301)||(4646834-4646871)
chr1 (344-380)||(14625368-14625405)
chr1 (122-159)||(17864828-17864865)
chr1 (129-170)||(28797380-28797420)
chr1 (270-307)||(30434429-30434466)
chr1 (349-378)||(30659569-30659598)
chr1 (129-170)||(42736612-42736653)
chr1 (349-378)||(46561541-46561570)
chr1 (130-174)||(5246513-5246557)
chr1 (264-296)||(5330598-5330630)
chr1 (264-296)||(5348313-5348345)
chr1 (127-167)||(33667654-33667694)
chr1 (267-307)||(36343333-36343372)
chr1 (347-379)||(50595999-50596031)
[»] chr6 (14 HSPs)
chr6 (347-381)||(17441399-17441433)
chr6 (127-174)||(8237635-8237682)
chr6 (264-307)||(33561902-33561944)
chr6 (347-377)||(5953163-5953193)
chr6 (132-174)||(31852007-31852049)
chr6 (348-377)||(4840687-4840716)
chr6 (264-301)||(5334719-5334756)
chr6 (347-380)||(30246088-30246121)
chr6 (344-390)||(33483684-33483732)
chr6 (264-301)||(33561801-33561838)
chr6 (264-296)||(12321125-12321157)
chr6 (264-296)||(24062340-24062372)
chr6 (344-381)||(24234326-24234365)
chr6 (126-174)||(25400792-25400840)
[»] scaffold0031 (2 HSPs)
scaffold0031 (121-170)||(2078-2127)
scaffold0031 (264-296)||(2002-2034)
[»] chr8 (20 HSPs)
chr8 (347-380)||(4105305-4105338)
chr8 (347-380)||(40652679-40652712)
chr8 (347-380)||(43945410-43945443)
chr8 (130-174)||(27543410-27543454)
chr8 (264-307)||(25601892-25601934)
chr8 (347-378)||(39808649-39808680)
chr8 (347-377)||(38500539-38500569)
chr8 (264-301)||(7988967-7989004)
chr8 (125-174)||(14329615-14329663)
chr8 (347-380)||(26447608-26447641)
chr8 (264-301)||(27198319-27198356)
chr8 (347-376)||(34374231-34374260)
chr8 (130-174)||(3912495-3912538)
chr8 (264-296)||(8307944-8307976)
chr8 (267-307)||(12330404-12330443)
chr8 (264-296)||(14329544-14329576)
chr8 (267-307)||(15152235-15152275)
chr8 (131-171)||(16093608-16093648)
chr8 (264-296)||(25601795-25601827)
chr8 (264-296)||(43945344-43945376)
[»] chr7 (26 HSPs)
chr7 (347-379)||(16902362-16902394)
chr7 (264-307)||(13286808-13286851)
chr7 (264-303)||(24205295-24205334)
chr7 (264-303)||(24206813-24206852)
chr7 (264-303)||(31186743-31186782)
chr7 (347-382)||(44414103-44414138)
chr7 (132-174)||(44568849-44568890)
chr7 (347-377)||(48104510-48104540)
chr7 (128-173)||(12180850-12180895)
chr7 (121-170)||(13286884-13286933)
chr7 (264-301)||(15037304-15037341)
chr7 (129-170)||(15037424-15037465)
chr7 (266-307)||(19410698-19410738)
chr7 (130-171)||(21811414-21811455)
chr7 (125-174)||(24845632-24845680)
chr7 (129-174)||(37079803-37079848)
chr7 (264-296)||(1693299-1693331)
chr7 (122-170)||(5766630-5766676)
chr7 (130-170)||(12814593-12814633)
chr7 (267-303)||(13279259-13279295)
chr7 (129-173)||(14079012-14079056)
chr7 (129-173)||(14389040-14389084)
chr7 (264-296)||(19410592-19410624)
chr7 (142-174)||(24204823-24204855)
chr7 (264-296)||(31186848-31186880)
chr7 (130-170)||(38192961-38193001)
[»] scaffold0002 (1 HSPs)
scaffold0002 (268-307)||(342491-342530)
[»] scaffold0809 (1 HSPs)
scaffold0809 (347-377)||(3770-3800)
[»] scaffold0041 (1 HSPs)
scaffold0041 (267-301)||(38125-38159)
[»] scaffold0769 (1 HSPs)
scaffold0769 (129-170)||(3912-3953)
[»] scaffold0009 (1 HSPs)
scaffold0009 (126-171)||(150243-150288)
[»] scaffold0727 (1 HSPs)
scaffold0727 (267-307)||(903-942)
[»] scaffold0450 (1 HSPs)
scaffold0450 (264-296)||(8039-8071)


Alignment Details
Target: chr2 (Bit Score: 118; Significance: 5e-60; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 358 - 487
Target Start/End: Original strand, 12693850 - 12693978
Alignment:
Q  358 ggggtaaagacctattaacccttatttatatatgttttatttgtaggaaggaggtatagaagtgatgatgtgactatagtttgtccattgtattatcctc 457  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12693850 ggggtaaagacctattaacc-ttatttatatatgttttatttgtgggaaggaggtatagaagtgatgatgtgactatagtttgtccattgtattatcctc 12693948  T
Q  458 atggaaaaaggtgtagaattcatagtataa 487  Q
    ||||||||||||||||||||||||||||||    
T  12693949 atggaaaaaggtgtagaattcatagtataa 12693978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 12693267 - 12693365
Alignment:
Q  1 ctaaatttacaatataagttagccaatggttcgaaacatatttagacaggtgactgagtcggtgaaggtagattatc--tgcttatttcctttccttca 97  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  12693267 ctaaatttacaatataagttagccaatggttcaaaacatattcagacaggtgactgagtcggtgaaggtagattatcaatgcttatttcctttccttca 12693365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 12693538 - 12693616
Alignment:
Q  96 caagtgcttggtcgatcttgtccgcattatttatagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  12693538 caagtgcttggtcgatcttgtccgcattatttatagggttaatatgtctttacacccttgtaatataggtcattttcgg 12693616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 12693745 - 12693794
Alignment:
Q  257 ggcttaataggggggtaaaccaaaacaaaaatattttacacgggggtaaa 306  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  12693745 ggcttaatagaggggtaaaccaaaacaaaaatattttacacgggtgtaaa 12693794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 378
Target Start/End: Complemental strand, 38935979 - 38935945
Alignment:
Q  344 tgtcctatattacaggggtaaagacctattaaccc 378  Q
    |||||||||||||||||||||||||||||||||||    
T  38935979 tgtcctatattacaggggtaaagacctattaaccc 38935945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 380
Target Start/End: Original strand, 85695 - 85728
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccctt 380  Q
    ||||||||||||||||||||||||||||||||||    
T  85695 cctatattacaggggtaaagacctattaaccctt 85728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 301
Target Start/End: Original strand, 9011928 - 9011965
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9011928 taggggggtaaaccaaaacaaaaatattttacaagggg 9011965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 22116149 - 22116197
Alignment:
Q  125 tttatagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  22116149 tttatagggttaataggtctttac-cccctgtaatataggtcattttcgg 22116197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 380
Target Start/End: Complemental strand, 39094230 - 39094197
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccctt 380  Q
    ||||||||||||||||||||||||||||||||||    
T  39094230 cctatattacaggggtaaagacctattaaccctt 39094197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 384
Target Start/End: Complemental strand, 41305912 - 41305875
Alignment:
Q  347 cctatattacaggggtaaagacctattaacccttattt 384  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  41305912 cctatattacaggggtaaagacctattaaccctaattt 41305875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 378
Target Start/End: Original strand, 5970779 - 5970810
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccc 378  Q
    ||||||||||||||||||||||||||||||||    
T  5970779 cctatattacaggggtaaagacctattaaccc 5970810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 9011753 - 9011796
Alignment:
Q  127 tatagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    ||||||||||||| |||||||| || ||||||||||||||||||    
T  9011753 tatagggttaatagatctttactccactgtaatataggtcattt 9011796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 25227938 - 25227895
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||||| |||||||||||||||||| | ||||||||||    
T  25227938 taggggggtaaatcaaaacaaaaatattttagaggggggtaaat 25227895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 378
Target Start/End: Complemental strand, 37200378 - 37200347
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccc 378  Q
    ||||||||||||||||||||||||||||||||    
T  37200378 cctatattacaggggtaaagacctattaaccc 37200347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 19493508 - 19493463
Alignment:
Q  128 atagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||||  ||||||| |||||||||||||||||||||||||    
T  19493508 atagggttaataggtctttac-cccctgtaatataggtcattttcgg 19493463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 20100756 - 20100802
Alignment:
Q  128 atagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    |||||||||||||  |||| ||||||||||||||| |||||||||||    
T  20100756 atagggttaatattgcttttcacccctgtaatatatgtcattttcgg 20100802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 20911978 - 20912024
Alignment:
Q  128 atagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||||   |||| |||||||||||||||||||||||||||    
T  20911978 atagggttaatagtgcttttcacccctgtaatataggtcattttcgg 20912024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 301
Target Start/End: Complemental strand, 23260433 - 23260395
Alignment:
Q  263 ataggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  23260433 ataggggggtaaatcaaaacaaaaatattttacaggggg 23260395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 22016001 - 22016054
Alignment:
Q  121 attatttatagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||| |||||||||||    |||||||||||| ||||||||||||||||||    
T  22016001 attatttctagggttaatagtgttttacacccctgcaatataggtcattttcgg 22016054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 28149547 - 28149510
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  28149547 taggggggtaaatcaaaacaaaaatattttacaggggg 28149510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 28484472 - 28484435
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  28484472 taggggggtaaatcaaaacaaaaatattttacaggggg 28484435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 30371498 - 30371461
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  30371498 taggggggtaaatcaaaacaaaaatattttacaggggg 30371461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 34636002 - 34635961
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  34636002 tagggttaataggtctttacccccctgtaatataggtcattt 34635961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 85438 - 85482
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||  ||||||| ||| |||||||||||||||||||||    
T  85438 agggttaataggtctttacccccttgtaatataggtcattttcgg 85482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 1902923 - 1902963
Alignment:
Q  124 atttatagggttaatatatctttacacccctgtaatatagg 164  Q
    ||||||||||||||||  ||||||| |||||||||||||||    
T  1902923 atttatagggttaataggtctttacccccctgtaatatagg 1902963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 5157361 - 5157317
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||   |||| |||||||||||||||||||||||||||    
T  5157361 agggttaatagtgcttttcacccctgtaatataggtcattttcgg 5157317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 7894259 - 7894219
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattt 170  Q
    |||||||||| |||||||| || ||||||||||||||||||    
T  7894259 agggttaatagatctttacccctctgtaatataggtcattt 7894219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 16577228 - 16577196
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  16577228 taggggggtaaatcaaaacaaaaatattttaca 16577196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 18048848 - 18048812
Alignment:
Q  347 cctatattacaggggtaaagacctattaacccttatt 383  Q
    ||||||||||||||||||||  |||||||||||||||    
T  18048848 cctatattacaggggtaaagcactattaacccttatt 18048812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 25926994 - 25926955
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  25926994 gggggtaaatcaaaacaaaaatattttaca-gggggtaaat 25926955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 377
Target Start/End: Original strand, 41089411 - 41089439
Alignment:
Q  349 tatattacaggggtaaagacctattaacc 377  Q
    |||||||||||||||||||||||||||||    
T  41089411 tatattacaggggtaaagacctattaacc 41089439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 380
Target Start/End: Original strand, 41859661 - 41859693
Alignment:
Q  348 ctatattacaggggtaaagacctattaaccctt 380  Q
    |||||||||||||||||||||||||||| ||||    
T  41859661 ctatattacaggggtaaagacctattaatcctt 41859693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 21246474 - 21246519
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    |||||||||||  |||||||||||||||||||||||||||||||||    
T  21246474 tagggttaataggtctttacacccctgtaatataggtcattttcgg 21246519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 5401759 - 5401803
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattttcg 173  Q
    |||||||||||  ||||||| ||||||||||||||||||||||||    
T  5401759 tagggttaataggtctttacccccctgtaatataggtcattttcg 5401803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 10718019 - 10717979
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  10718019 gggggtaaatcaaaacaaaaatattttacaggggggtaaat 10717979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 10931788 - 10931748
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  10931788 gggggtaaatcaaaacaaaaatattttacaggggggtaaat 10931748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 13334934 - 13334894
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  13334934 gggggtaaatcaaaacaaaaatattttacaagggggtaaat 13334894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 6439298 - 6439256
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||||| |||||||||||||||||||| ||||||||||    
T  6439298 taggggggtaaatcaaaacaaaaatattttaca-gggggtaaat 6439256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 303
Target Start/End: Complemental strand, 18454307 - 18454268
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggt 303  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  18454307 taggggggtaaatcaaaacaaaaatattttacaagggggt 18454268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 385
Target Start/End: Complemental strand, 17800786 - 17800748
Alignment:
Q  347 cctatattacaggggtaaagacctattaacccttattta 385  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  17800786 cctatattacaggagtaaagacctattaaccctaattta 17800748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 381
Target Start/End: Complemental strand, 29248277 - 29248239
Alignment:
Q  344 tgtcctatattacagggg-taaagacctattaaccctta 381  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  29248277 tgtcctatattacagggggtaaagacctattaaccctta 29248239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 18454489 - 18454448
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  18454489 tagggttaataggtctttacccccctgtaatataggtcattt 18454448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 21798330 - 21798371
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  21798330 tagggttaataggtctttacccccctgtaatataggtcattt 21798371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 1386065 - 1386033
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccct 379  Q
    |||||||||||||| ||||||||||||||||||    
T  1386065 cctatattacagggataaagacctattaaccct 1386033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 10682792 - 10682753
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  10682792 gggggtaaatcaaaacaaaaatattttaca-gggggtaaat 10682753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 10682864 - 10682903
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  10682864 gggggtaaatcaaaacaaaaatattttaca-gggggtaaat 10682903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 10896432 - 10896393
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  10896432 gggggtaaatcaaaacaaaaatattttaca-gggggtaaat 10896393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 10896504 - 10896543
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  10896504 gggggtaaatcaaaacaaaaatattttaca-gggggtaaat 10896543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 13910793 - 13910837
Alignment:
Q  264 taggggggtaaaccaaaa-caaaaatattttacacgggggtaaat 307  Q
    ||||||||||| |||||| ||||||||||||||| ||||||||||    
T  13910793 taggggggtaatccaaaaacaaaaatattttacaggggggtaaat 13910837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 16482234 - 16482273
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  16482234 gggggtaaatcaaaacaaaaatattttaca-gggggtaaat 16482273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 18320754 - 18320714
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattt 170  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  18320754 agggttaataggtctttacccccctgtaatataggtcattt 18320714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 18454191 - 18454231
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattt 170  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  18454191 agggttaataggtctttacccccctgtaatataggtcattt 18454231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 303
Target Start/End: Original strand, 18454375 - 18454411
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggt 303  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  18454375 gggggtaaagcaaaacaaaaatattttacaggggggt 18454411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 19875918 - 19875958
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||| || |||||||||||||||||||    
T  19875918 gggggtaaatcaaaacaataaaattttacacgggggtaaat 19875958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 21780121 - 21780164
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||    
T  21780121 agggttaataggtctttac-cccctgtaatataggtcattttcgg 21780164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 171
Target Start/End: Original strand, 24670500 - 24670528
Alignment:
Q  143 ctttacacccctgtaatataggtcatttt 171  Q
    |||||||||||||||||||||||||||||    
T  24670500 ctttacacccctgtaatataggtcatttt 24670528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 45274141 - 45274098
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||| |||||| || |||||||||||||||||||||||    
T  45274141 agggttaatatgtcttta-actcctgtaatataggtcattttcgg 45274098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 45900528 - 45900568
Alignment:
Q  131 gggttaatatatctttacacccctgtaatataggtcatttt 171  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  45900528 gggttaataggtctttacccccctgtaatataggtcatttt 45900568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 45900631 - 45900592
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  45900631 gggggtaaatcaaaacaaaaatattttaca-gggggtaaat 45900592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 45900661 - 45900622
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  45900661 gggggtaaatcaaaacaaaaatattttaca-gggggtaaat 45900622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 45900729 - 45900761
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  45900729 taggggggtaaatcaaaacaaaaatattttaca 45900761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 51965483 - 51965447
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacggg 300  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  51965483 tagggaggtaaatcaaaacaaaaatattttacacggg 51965447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 376
Target Start/End: Complemental strand, 54130392 - 54130364
Alignment:
Q  348 ctatattacaggggtaaagacctattaac 376  Q
    |||||||||||||||||||||||||||||    
T  54130392 ctatattacaggggtaaagacctattaac 54130364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 18229748 - 18229792
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||  |||||||||||||||||||||||||||||||||    
T  18229748 agggttaataggtctttacacccctgtaatataggtcattttcgg 18229792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 711232 - 711276
Alignment:
Q  126 ttatagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||    
T  711232 ttatagggttaataggtctttacccccctgtaatataggtcattt 711276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 26035029 - 26035069
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  26035029 gggggtaaatcaaaacaaaaatattttacaagggggtaaat 26035069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 12330967 - 12330924
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  12330967 taggggggtaaatcaaaacaaaaatattttacaagagggtaaat 12330924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 711517 - 711475
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattttc 172  Q
    ||||||||||  ||||||| |||||||||||||||||||||||    
T  711517 agggttaataggtctttacccccctgtaatataggtcattttc 711475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 9227141 - 9227103
Alignment:
Q  132 ggttaatatatctttacacccctgtaatataggtcattt 170  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  9227141 ggttaataggtctttacacccctgtaatataggtcattt 9227103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 377
Target Start/End: Original strand, 21149126 - 21149156
Alignment:
Q  347 cctatattacaggggtaaagacctattaacc 377  Q
    |||||||||||||||||||||||||||||||    
T  21149126 cctatattacaggggtaaagacctattaacc 21149156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 20688908 - 20688871
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  20688908 taggggggtaaatcaaaacaaaaatattttacaggggg 20688871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 22642386 - 22642341
Alignment:
Q  125 tttatagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    |||||||||||||||  ||||||| || ||||||||||||||||||    
T  22642386 tttatagggttaataggtctttacccctctgtaatataggtcattt 22642341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 29754046 - 29754087
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    ||||||||||| |||||||| ||||| |||||||||||||||    
T  29754046 tagggttaatagatctttacccccctataatataggtcattt 29754087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 31861604 - 31861567
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  31861604 taggggggtaaatcaaaacaaaaatattttacaggggg 31861567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Original strand, 31861670 - 31861707
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  31861670 taggggggtaaatcaaaacaaaaatattttacaggggg 31861707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 37204926 - 37204966
Alignment:
Q  266 ggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  37204926 ggggggtaaatcaaaacaaaaatattttaca-gggggtaaat 37204966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 37205039 - 37204995
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    |||||||||||| ||||||| || ||||||||||||||||||||||    
T  37205039 tagggttaatatgtctttac-cctctgtaatataggtcattttcgg 37204995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 9227031 - 9227070
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  9227031 gggggtaaatcaaaacaaaaatattttaca-gggggtaaat 9227070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 10331952 - 10331904
Alignment:
Q  123 tatttatagggttaatatatctttacacccctgtaatataggtcatttt 171  Q
    ||||||||||||||||    |||||| ||||||||||||||||||||||    
T  10331952 tatttatagggttaatggtactttacccccctgtaatataggtcatttt 10331904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 10976809 - 10976766
Alignment:
Q  126 ttatagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||    
T  10976809 ttatagggttaataggtctttac-cccctgtaatataggtcattt 10976766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 12330854 - 12330893
Alignment:
Q  131 gggttaatatatctttacacccctgtaatataggtcatttt 171  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  12330854 gggttaatatgtcttta-acccctgtaatataggtcatttt 12330893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 381
Target Start/End: Complemental strand, 15060199 - 15060160
Alignment:
Q  344 tgtcctatattacagggg--taaagacctattaaccctta 381  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  15060199 tgtcctatattacaggggggtaaagacctattaaccctta 15060160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 16504993 - 16504961
Alignment:
Q  142 tctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||| |||||||||||||||||||||||||    
T  16504993 tctttacccccctgtaatataggtcattttcgg 16504961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 21148832 - 21148796
Alignment:
Q  347 cctatattacaggggtaaagacctattaacccttatt 383  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  21148832 cctatattacaggggtaaaaacctattatcccttatt 21148796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 26035109 - 26035141
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccct 379  Q
    |||||||||||||||||||||||| ||||||||    
T  26035109 cctatattacaggggtaaagacctcttaaccct 26035141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 26720496 - 26720448
Alignment:
Q  126 ttatagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||||||   |||| ||||||||||||||||| |||||||||    
T  26720496 ttatagggttaataatgcttttcacccctgtaatataggccattttcgg 26720448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 26990245 - 26990197
Alignment:
Q  126 ttatagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||||||   |||| ||||||||||||||||| |||||||||    
T  26990245 ttatagggttaataatgcttttcacccctgtaatataggccattttcgg 26990197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 382
Target Start/End: Complemental strand, 29104476 - 29104440
Alignment:
Q  347 cctatattacagggg-taaagacctattaacccttat 382  Q
    ||||||||||||||| |||||||||||||||||||||    
T  29104476 cctatattacagggggtaaagacctattaacccttat 29104440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 37204861 - 37204822
Alignment:
Q  266 ggggggtaaaccaaaacaaaaatattttacacgggggtaaa 306  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  37204861 ggggggtaaatcaaaacaaaaatattttaca-gggggtaaa 37204822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 39153415 - 39153455
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattt 170  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  39153415 agggttaataggtctttacccccctgtaatataggtcattt 39153455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000005; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 8355510 - 8355553
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||||| |||||||||||||||||||| ||||||||||    
T  8355510 taggggggtaaatcaaaacaaaaatattttacaagggggtaaat 8355553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 51252162 - 51252119
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||||| |||||||||||||||||||| ||||||||||    
T  51252162 taggggggtaaatcaaaacaaaaatattttacaagggggtaaat 51252119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 20956933 - 20956983
Alignment:
Q  121 attatttatagggttaatatatctttacacccctgtaatataggtcatttt 171  Q
    ||||||||| |||||||||  ||||||||||||||||||||| ||||||||    
T  20956933 attatttattgggttaataggtctttacacccctgtaatatatgtcatttt 20956983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 7226058 - 7226111
Alignment:
Q  121 attatttatagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    |||| ||||||||||||||   |||||| |||||||||||||||||||||||||    
T  7226058 attaattatagggttaatagtgctttacccccctgtaatataggtcattttcgg 7226111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 303
Target Start/End: Original strand, 3548299 - 3548338
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggt 303  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  3548299 taggggggtaaatcaaaacaaaaatattttacaagggggt 3548338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 170
Target Start/End: Original strand, 7118087 - 7118126
Alignment:
Q  131 gggttaatatatctttacacccctgtaatataggtcattt 170  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  7118087 gggttaataggtctttacacccctgtaatataggtcattt 7118126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 386
Target Start/End: Original strand, 20957195 - 20957234
Alignment:
Q  348 ctatattacagggg-taaagacctattaacccttatttat 386  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  20957195 ctatattacagggggtaaagacctattaacccttatttat 20957234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 303
Target Start/End: Original strand, 27432763 - 27432802
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggt 303  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  27432763 taggggggtaaatcaaaacaaaaatattttacaagggggt 27432802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 303
Target Start/End: Original strand, 49872893 - 49872932
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggt 303  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  49872893 taggggggtaaatcaaaacaaaaatattttacaagggggt 49872932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 51252227 - 51252270
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||| |||||| |||||||||||||||||||| ||||||||||    
T  51252227 tagggaggtaaatcaaaacaaaaatattttacaggggggtaaat 51252270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 30586159 - 30586201
Alignment:
Q  128 atagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    ||||||||||||  ||||||| |||||||||||||||||||||    
T  30586159 atagggttaataggtctttacccccctgtaatataggtcattt 30586201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 376
Target Start/End: Complemental strand, 5416093 - 5416064
Alignment:
Q  347 cctatattacaggggtaaagacctattaac 376  Q
    ||||||||||||||||||||||||||||||    
T  5416093 cctatattacaggggtaaagacctattaac 5416064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 380
Target Start/End: Complemental strand, 15309115 - 15309082
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccctt 380  Q
    ||||||||||||||||||| ||||||||||||||    
T  15309115 cctatattacaggggtaaaaacctattaaccctt 15309082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 27432673 - 27432722
Alignment:
Q  123 tatttata-gggttaatatatctttacacccctgtaatataggtcatttt 171  Q
    |||||||| |||||||||  ||||||| ||||||||||||||||||||||    
T  27432673 tatttatatgggttaataggtctttacccccctgtaatataggtcatttt 27432722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 380
Target Start/End: Original strand, 37977528 - 37977565
Alignment:
Q  344 tgtcctatattacagggg-taaagacctattaaccctt 380  Q
    |||||||||||||||||| |||||||||||||||||||    
T  37977528 tgtcctatattacagggggtaaagacctattaaccctt 37977565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 3072452 - 3072420
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccct 379  Q
    |||||||||||| ||||||||||||||||||||    
T  3072452 cctatattacagaggtaaagacctattaaccct 3072420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 5205421 - 5205373
Alignment:
Q  122 ttatttatagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    |||||| |||||||||||  | ||||| |||||||||||||||||||||    
T  5205421 ttatttttagggttaataggtttttacccccctgtaatataggtcattt 5205373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 384
Target Start/End: Original strand, 10616798 - 10616837
Alignment:
Q  347 cctatattacagggg--taaagacctattaacccttattt 384  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  10616798 cctatattacaggggggtaaagacctattaacccttattt 10616837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 13439628 - 13439671
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    |||||||||| | |||||| |||||||||||||||||||||||||    
T  13439628 agggttaataaagctttac-cccctgtaatataggtcattttcgg 13439671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 25110119 - 25110076
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||    
T  25110119 agggttaataggtctttacaccc-tgtaatataggtcattttcgg 25110076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 26770297 - 26770253
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||   |||||| |||||||||||||||||||||||||    
T  26770297 agggttaatagtgctttacccccctgtaatataggtcattttcgg 26770253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 30271657 - 30271625
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  30271657 taggggggtaaatcaaaacaaaaatattttaca 30271625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 30271722 - 30271754
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  30271722 taggggggtaaatcaaaacaaaaatattttaca 30271754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 30586277 - 30586245
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  30586277 taggggggtaaatcaaaacaaaaatattttaca 30586245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 31173611 - 31173647
Alignment:
Q  348 ctatattacaggggtaaagacctattaacccttattt 384  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  31173611 ctatattacaggggtaaagacctattaatcctaattt 31173647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 43767917 - 43767949
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccct 379  Q
    |||||| ||||||||||||||||||||||||||    
T  43767917 cctatactacaggggtaaagacctattaaccct 43767949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 49872826 - 49872790
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggt 303  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  49872826 gggggtaaatcaaaacaaaaatattttacaggggggt 49872790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000005; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 36343269 - 36343226
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||||| |||||||||||||||||||| ||||||||||    
T  36343269 taggggggtaaatcaaaacaaaaatattttacaggggggtaaat 36343226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 8620251 - 8620211
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattt 170  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  8620251 agggttaatagatctttacccccctgtaatataggtcattt 8620211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 2059307 - 2059265
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||||| |||||||||||||||||||| ||||||||||    
T  2059307 taggggggtaaatcaaaacaaaaatattttaca-gggggtaaat 2059265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 303
Target Start/End: Complemental strand, 27794471 - 27794432
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggt 303  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  27794471 taggggggtaaatcaaaacaaaaatattttacaggggggt 27794432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 303
Target Start/End: Original strand, 27794537 - 27794576
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggt 303  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  27794537 taggggggtaaagcaaaacaaaaatattttacaggggggt 27794576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 28724473 - 28724516
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||||| |||||||||||||||||||| |||| |||||    
T  28724473 taggggggtaaatcaaaacaaaaatattttacagggggataaat 28724516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 35167952 - 35167994
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||||| |||||||||||||||||||| ||||||||||    
T  35167952 taggggggtaaatcaaaacaaaaatattttaca-gggggtaaat 35167994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 301
Target Start/End: Original strand, 2059373 - 2059407
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    ||||||||| |||||||||||||||||||||||||    
T  2059373 gggggtaaatcaaaacaaaaatattttacacgggg 2059407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 4646871 - 4646834
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  4646871 taggggggtaaatcaaaacaaaaatattttacaggggg 4646834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 380
Target Start/End: Complemental strand, 14625405 - 14625368
Alignment:
Q  344 tgtcctatattacagggg-taaagacctattaaccctt 380  Q
    |||||||||||||||||| |||||||||||||||||||    
T  14625405 tgtcctatattacagggggtaaagacctattaaccctt 14625368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 17864828 - 17864865
Alignment:
Q  122 ttatttatagggttaatatatctttacacccctgtaat 159  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  17864828 ttatttttagggttaatatgtctttacacccctgtaat 17864865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 28797420 - 28797380
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  28797420 tagggttaataaatctttac-cccctgtaatataggtcattt 28797380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 30434429 - 30434466
Alignment:
Q  270 ggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  30434429 ggtaaatcaaaacaaaaatattttacaagggggtaaat 30434466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 378
Target Start/End: Original strand, 30659569 - 30659598
Alignment:
Q  349 tatattacaggggtaaagacctattaaccc 378  Q
    ||||||||||||||||||||||||||||||    
T  30659569 tatattacaggggtaaagacctattaaccc 30659598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 42736612 - 42736653
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  42736612 tagggttaataagtctttacccccctgtaatataggtcattt 42736653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 378
Target Start/End: Original strand, 46561541 - 46561570
Alignment:
Q  349 tatattacaggggtaaagacctattaaccc 378  Q
    ||||||||||||||||||||||||||||||    
T  46561541 tatattacaggggtaaagacctattaaccc 46561570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 5246557 - 5246513
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    |||||||||||  |||| ||||||||||||||| |||||||||||    
T  5246557 agggttaatattgcttttcacccctgtaatatatgtcattttcgg 5246513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 5330598 - 5330630
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  5330598 taggggggtaaatcaaaacaaaaatattttaca 5330630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 5348313 - 5348345
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  5348313 taggggggtaaatcaaaacaaaaatattttaca 5348345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 33667694 - 33667654
Alignment:
Q  127 tatagggttaatatatctttacacccctgtaatataggtca 167  Q
    |||||||||||||   |||||||||||||||||||||||||    
T  33667694 tatagggttaataggcctttacacccctgtaatataggtca 33667654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 36343333 - 36343372
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  36343333 gggggtaaatcaaaacaaaaatattttaca-gggggtaaat 36343372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 50596031 - 50595999
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccct 379  Q
    ||||||||||| |||||||||||||||||||||    
T  50596031 cctatattacaagggtaaagacctattaaccct 50595999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 17441433 - 17441399
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccctta 381  Q
    |||||||||||||||||||||||||||||||||||    
T  17441433 cctatattacaggggtaaagacctattaaccctta 17441399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 8237635 - 8237682
Alignment:
Q  127 tatagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    |||||||||||||   |||||| |||||||||||||||||||||||||    
T  8237635 tatagggttaataatgctttacccccctgtaatataggtcattttcgg 8237682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 33561902 - 33561944
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||||| |||||||||||||||||||| ||||||||||    
T  33561902 taggggggtaaatcaaaacaaaaatattttaca-gggggtaaat 33561944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 377
Target Start/End: Complemental strand, 5953193 - 5953163
Alignment:
Q  347 cctatattacaggggtaaagacctattaacc 377  Q
    |||||||||||||||||||||||||||||||    
T  5953193 cctatattacaggggtaaagacctattaacc 5953163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 31852049 - 31852007
Alignment:
Q  132 ggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||  ||||||| |||||||||||||||||||||||||    
T  31852049 ggttaataggtctttacccccctgtaatataggtcattttcgg 31852007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 377
Target Start/End: Complemental strand, 4840716 - 4840687
Alignment:
Q  348 ctatattacaggggtaaagacctattaacc 377  Q
    ||||||||||||||||||||||||||||||    
T  4840716 ctatattacaggggtaaagacctattaacc 4840687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 5334756 - 5334719
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  5334756 taggggggtaaatcaaaacaaaaatattttacaagggg 5334719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 380
Target Start/End: Original strand, 30246088 - 30246121
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccctt 380  Q
    |||||||||||||||||| |||||||||||||||    
T  30246088 cctatattacaggggtaacgacctattaaccctt 30246121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 390
Target Start/End: Complemental strand, 33483732 - 33483684
Alignment:
Q  344 tgtcctatattacaggg--gtaaagacctattaacccttatttatatat 390  Q
    |||||||||||||||||  |||||||||||||||||| ||| |||||||    
T  33483732 tgtcctatattacagggtggtaaagacctattaacccatatatatatat 33483684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 33561838 - 33561801
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  33561838 taggggggtaaatcaaaacaaaaatattttacatgggg 33561801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 12321125 - 12321157
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  12321125 taggggggtaaatcaaaacaaaaatattttaca 12321157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 24062340 - 24062372
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  24062340 taggggggtaaatcaaaacaaaaatattttaca 24062372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 381
Target Start/End: Complemental strand, 24234365 - 24234326
Alignment:
Q  344 tgtcctatattacagggg--taaagacctattaaccctta 381  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  24234365 tgtcctatattacaggggggtaaagacctattaaccctta 24234326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 25400840 - 25400792
Alignment:
Q  126 ttatagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    |||| |||||||||  ||||||| ||| |||||||||||||||||||||    
T  25400840 ttattgggttaataggtctttacccccttgtaatataggtcattttcgg 25400792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 2127 - 2078
Alignment:
Q  121 attatttatagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    |||||||| ||||||||||  ||||||| |||||||||||||||||||||    
T  2127 attatttaaagggttaataggtctttacccccctgtaatataggtcattt 2078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 2002 - 2034
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  2002 taggggggtaaatcaaaacaaaaatattttaca 2034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000007; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 380
Target Start/End: Original strand, 4105305 - 4105338
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccctt 380  Q
    ||||||||||||||||||||||||||||||||||    
T  4105305 cctatattacaggggtaaagacctattaaccctt 4105338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 380
Target Start/End: Original strand, 40652679 - 40652712
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccctt 380  Q
    ||||||||||||||||||||||||||||||||||    
T  40652679 cctatattacaggggtaaagacctattaaccctt 40652712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 380
Target Start/End: Original strand, 43945410 - 43945443
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccctt 380  Q
    ||||||||||||||||||||||||||||||||||    
T  43945410 cctatattacaggggtaaagacctattaaccctt 43945443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 27543410 - 27543454
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||    
T  27543410 agggttaataggtctttacccccctgtaatataggtcattttcgg 27543454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 25601892 - 25601934
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||||| |||||||||||||||||||| ||||||||||    
T  25601892 taggggggtaaatcaaaacaaaaatattttaca-gggggtaaat 25601934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 378
Target Start/End: Complemental strand, 39808680 - 39808649
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccc 378  Q
    ||||||||||||||||||||||||||||||||    
T  39808680 cctatattacaggggtaaagacctattaaccc 39808649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 377
Target Start/End: Original strand, 38500539 - 38500569
Alignment:
Q  347 cctatattacaggggtaaagacctattaacc 377  Q
    |||||||||||||||||||||||||||||||    
T  38500539 cctatattacaggggtaaagacctattaacc 38500569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Original strand, 7988967 - 7989004
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  7988967 taggggggtaaatcaaaacaaaaatattttacaggggg 7989004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 14329663 - 14329615
Alignment:
Q  125 tttatagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    |||| ||||||||||  ||||||| |||||||||||||||||||||||||    
T  14329663 tttacagggttaataggtctttac-cccctgtaatataggtcattttcgg 14329615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 380
Target Start/End: Original strand, 26447608 - 26447641
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccctt 380  Q
    ||||||||||||||||||||||||||||| ||||    
T  26447608 cctatattacaggggtaaagacctattaatcctt 26447641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Original strand, 27198319 - 27198356
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  27198319 taggggggtaaatcaaaacaaaaatattttacaggggg 27198356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 376
Target Start/End: Complemental strand, 34374260 - 34374231
Alignment:
Q  347 cctatattacaggggtaaagacctattaac 376  Q
    ||||||||||||||||||||||||||||||    
T  34374260 cctatattacaggggtaaagacctattaac 34374231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 3912538 - 3912495
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||    
T  3912538 agggttaataagtctttac-cccctgtaatataggtcattttcgg 3912495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 8307976 - 8307944
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  8307976 taggggggtaaatcaaaacaaaaatattttaca 8307944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 12330443 - 12330404
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  12330443 gggggtaaatcaaaacaaaaatattttaca-gggggtaaat 12330404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 14329544 - 14329576
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  14329544 taggggggtaaatcaaaacaaaaatattttaca 14329576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 15152235 - 15152275
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||  ||||||||||||||||||||| ||||||||||    
T  15152235 gggggtattccaaaacaaaaatattttacaagggggtaaat 15152275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 16093608 - 16093648
Alignment:
Q  131 gggttaatatatctttacacccctgtaatataggtcatttt 171  Q
    |||||||||  ||||||||||| ||||||||||||||||||    
T  16093608 gggttaataggtctttacacccttgtaatataggtcatttt 16093648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 25601827 - 25601795
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  25601827 taggggggtaaatcaaaacaaaaatattttaca 25601795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 43945344 - 43945376
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  43945344 taggggggtaaatcaaaacaaaaatattttaca 43945376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 16902362 - 16902394
Alignment:
Q  347 cctatattacaggggtaaagacctattaaccct 379  Q
    |||||||||||||||||||||||||||||||||    
T  16902362 cctatattacaggggtaaagacctattaaccct 16902394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 13286808 - 13286851
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||||| |||||||||||||||||||| |||| |||||    
T  13286808 taggggggtaaatcaaaacaaaaatattttacagggggttaaat 13286851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 303
Target Start/End: Original strand, 24205295 - 24205334
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggt 303  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  24205295 taggggggtaaatcaaaacaaaaatattttacaggggggt 24205334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 303
Target Start/End: Original strand, 24206813 - 24206852
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggt 303  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  24206813 taggggggtaaatcaaaacaaaaatattttacaggggggt 24206852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 303
Target Start/End: Complemental strand, 31186782 - 31186743
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggggt 303  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  31186782 taggggggtaaatcaaaacaaaaatattttacaggggggt 31186743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 382
Target Start/End: Original strand, 44414103 - 44414138
Alignment:
Q  347 cctatattacaggggtaaagacctattaacccttat 382  Q
    ||||||||||||||||||||||||||||||| ||||    
T  44414103 cctatattacaggggtaaagacctattaacctttat 44414138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 44568849 - 44568890
Alignment:
Q  132 ggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    |||||||| |||||||| |||||||||||||||||||||||||    
T  44568849 ggttaatagatctttac-cccctgtaatataggtcattttcgg 44568890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 377
Target Start/End: Complemental strand, 48104540 - 48104510
Alignment:
Q  347 cctatattacaggggtaaagacctattaacc 377  Q
    |||||||||||||||||||||||||||||||    
T  48104540 cctatattacaggggtaaagacctattaacc 48104510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 12180895 - 12180850
Alignment:
Q  128 atagggttaatatatctttacacccctgtaatataggtcattttcg 173  Q
    ||||||||||||  ||||||  ||||||||||||||||||||||||    
T  12180895 atagggttaataggtctttatccccctgtaatataggtcattttcg 12180850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 13286933 - 13286884
Alignment:
Q  121 attatttatagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    ||||||| |||||||||||  ||||||| ||| |||||||||||||||||    
T  13286933 attatttttagggttaataggtctttacccccttgtaatataggtcattt 13286884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 15037341 - 15037304
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  15037341 taggggggtaaatcaaaacaaaaatattttacaggggg 15037304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 15037465 - 15037424
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  15037465 tagggttaataggtctttacccccctgtaatataggtcattt 15037424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 19410698 - 19410738
Alignment:
Q  266 ggggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  19410698 ggggggtaaatcaaaacaaaaatattttaca-gggggtaaat 19410738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 21811414 - 21811455
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcatttt 171  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  21811414 agggttaatagatctttatccccctgtaatataggtcatttt 21811455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 24845632 - 24845680
Alignment:
Q  125 tttatagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    |||||||||||||||  ||||||| | |||||||||||||||||||||||    
T  24845632 tttatagggttaataggtctttac-ctcctgtaatataggtcattttcgg 24845680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 37079803 - 37079848
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattttcgg 174  Q
    |||||||||||   |||| |||||||||||||||||||||||||||    
T  37079803 tagggttaatagtgcttttcacccctgtaatataggtcattttcgg 37079848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 1693331 - 1693299
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  1693331 taggggggtaaatcaaaacaaaaatattttaca 1693299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 5766630 - 5766676
Alignment:
Q  122 ttatttatagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  5766630 ttatttat-gggttaatatgtctttac-cccctgtaatataggtcattt 5766676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 12814593 - 12814633
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattt 170  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  12814593 agggttaataggtctttactcccctgtaatataggtcattt 12814633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 13279295 - 13279259
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggt 303  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  13279295 gggggtaaatcaaaacaaaaatattttacaggggggt 13279259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 14079056 - 14079012
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattttcg 173  Q
    |||||||||||  ||||||| ||| ||||||||||||||||||||    
T  14079056 tagggttaataggtctttacccccatgtaatataggtcattttcg 14079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 14389084 - 14389040
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattttcg 173  Q
    |||||||||||  ||||||| ||| ||||||||||||||||||||    
T  14389084 tagggttaataggtctttacccccatgtaatataggtcattttcg 14389040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 19410624 - 19410592
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  19410624 taggggggtaaatcaaaacaaaaatattttaca 19410592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 24204823 - 24204855
Alignment:
Q  142 tctttacacccctgtaatataggtcattttcgg 174  Q
    ||||||| |||||||||||||||||||||||||    
T  24204823 tctttacccccctgtaatataggtcattttcgg 24204855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 31186848 - 31186880
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  31186848 taggggggtaaatcaaaacaaaaatattttaca 31186880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 38192961 - 38193001
Alignment:
Q  130 agggttaatatatctttacacccctgtaatataggtcattt 170  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  38192961 agggttaataggtctttacccccctgtaatataggtcattt 38193001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 307
Target Start/End: Complemental strand, 342530 - 342491
Alignment:
Q  268 ggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  342530 ggggtaatccaaaaaaaaaatattttacacgggggtaaat 342491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 377
Target Start/End: Complemental strand, 3800 - 3770
Alignment:
Q  347 cctatattacaggggtaaagacctattaacc 377  Q
    |||||||||||||||||||||||||||||||    
T  3800 cctatattacaggggtaaagacctattaacc 3770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 301
Target Start/End: Complemental strand, 38159 - 38125
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggg 301  Q
    ||||||||| |||||||||||||||||||||||||    
T  38159 gggggtaaatcaaaacaaaaatattttacacgggg 38125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 3912 - 3953
Alignment:
Q  129 tagggttaatatatctttacacccctgtaatataggtcattt 170  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  3912 tagggttaataggtctttacccccctgtaatataggtcattt 3953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 150288 - 150243
Alignment:
Q  126 ttatagggttaatatatctttacacccctgtaatataggtcatttt 171  Q
    |||||||||||||    |||||||||||||||||||||||||||||    
T  150288 ttatagggttaatggtgctttacacccctgtaatataggtcatttt 150243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 942 - 903
Alignment:
Q  267 gggggtaaaccaaaacaaaaatattttacacgggggtaaat 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  942 gggggtaaatcaaaacaaaaatattttaca-gggggtaaat 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 8039 - 8071
Alignment:
Q  264 taggggggtaaaccaaaacaaaaatattttaca 296  Q
    |||||||||||| ||||||||||||||||||||    
T  8039 taggggggtaaatcaaaacaaaaatattttaca 8071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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