View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2603_low_10 (Length: 410)
Name: NF2603_low_10
Description: NF2603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2603_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 38 - 396
Target Start/End: Original strand, 53079724 - 53080080
Alignment:
| Q |
38 |
gtatagttgttaaatgctttcagaaccaaacccagtttcctttcagaacatatatgtatactttcatctaaatctataaccctttattcataaactactc |
137 |
Q |
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| T |
53079724 |
gtatagttgttaaatgctttcagaatcaaacccagtttcctttcagaacatatatgtatactttcatctaaatctataaccctttattcataaactactc |
53079823 |
T |
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| Q |
138 |
accagagaaacaattacagataaaaagttgcatgtacagtacaaaaaacatgggataaaaagttatgtataaacaaagataagannnnnnngatgatacc |
237 |
Q |
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| T |
53079824 |
atcagagaaacaattacagataaaaagtttcatgtacagtacaaaaaacatgggataaaaagttatgtataaacaaagataagatttttttgatgatacc |
53079923 |
T |
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| Q |
238 |
cttttgtataagaacaatttcacttagaaatcaaaggaaaattgataacccgcatgaattatgagtgtaaaatctttgaacttgaagtcaatcaaagagt |
337 |
Q |
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| T |
53079924 |
cttttgtataagaacaatttcacttagaaatcaaaggaaaattgataacccacatgaattatgagtgtaaaatctttgaccttgaagtcaatcaaagagt |
53080023 |
T |
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| Q |
338 |
cataatatgnnnnnnnntcaaaactttacaaagattgaagctgataatcatgtataata |
396 |
Q |
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| T |
53080024 |
cataatatg--aaaaaatcaaaactttacaaagattgaagctgttaatcatgtaaaata |
53080080 |
T |
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