View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2603_low_28 (Length: 237)
Name: NF2603_low_28
Description: NF2603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2603_low_28 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 6735654 - 6735434
Alignment:
| Q |
1 |
tgttataaattttaaatttatacaaatgatatttttattttcaattgcttgtgcgaaaatccaatgaatcttctttggttaatggtaatcgtggcttcca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6735654 |
tgttataaattttaaatttatacaaatgatatttttattttcaattgcttgtgcgaaaatccaatgaatcttctttggttaatggtaatcgtggcttcca |
6735555 |
T |
|
| Q |
101 |
tgtcttagaaatatagactcaccaaggcataagagagtaaatgctactcagagatcattacagttaggtacgtccatagactcaccaaggtaaatgtatg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
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| T |
6735554 |
tgtcttagaaatatagactcaccaaggcataagagagtaaatgctactcagagatcattacagttaggtacatccatagactcaccaaggcaaatgtatg |
6735455 |
T |
|
| Q |
201 |
ctttaagatattcaaaaatca |
221 |
Q |
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||||||||||||||||||||| |
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| T |
6735454 |
ctttaagatattcaaaaatca |
6735434 |
T |
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