View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2604_high_34 (Length: 303)
Name: NF2604_high_34
Description: NF2604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2604_high_34 |
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Alignment Details
Target: chr2 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 5 - 288
Target Start/End: Original strand, 8084568 - 8084852
Alignment:
| Q |
5 |
atgaataactctacctatttttgttgatggataaattaaataacaattagc-taggaacttagaatggtgcttaggatatcagctagcatttagcatgca |
103 |
Q |
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| T |
8084568 |
atgaataactctacctatttttgttgatggataaattaaataacaatttgcctaggaacttagaatggtgcttaggatatcagctagcatttagcatgca |
8084667 |
T |
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| Q |
104 |
gttgatgatgagaactttgaggtccaatacttttcaatatcttctggggttcttccagggattcttccagcaatgagatgccatctacaattaacatgta |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8084668 |
gttgatgatgagaactttgaggtccaatacttttcaatatcttctggggttcttccagggattcttccagcaatgagatgccatctacaattaacatgta |
8084767 |
T |
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| Q |
204 |
cgtcgacacttaatttagagtttctccaatacaaacacataatactaattgcctcatcaagtttgtgcaaatgcaaggaagatac |
288 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8084768 |
cgtcgacacttaatttagagtttctccaatacaaacacataatactaattgcctcatcaagtttgtgcaaatgcaaggaagatac |
8084852 |
T |
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