View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2604_high_53 (Length: 235)
Name: NF2604_high_53
Description: NF2604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2604_high_53 |
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Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 14880269 - 14880047
Alignment:
| Q |
1 |
tgcatatatgttccatttcaatcctaatcactaatgatcgtgtccataatatttagtttcgccttcaacttgtatcgttcttttgccatattttctccaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
14880269 |
tgcatatatgttccatttcaatcctaatcactaatgatcgtgtccataatatttagtttcgccttcaacttgtatcattcttttgccatattttctccaa |
14880170 |
T |
|
| Q |
101 |
cttg--cggtaattagaatcgacaatctaggaattctaaccacaccctaacaaaagaaaacgacaagttttaaacataaacaacatattatgaacactaa |
198 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14880169 |
cttgtgcggtaattagaatcgacaatctaggaattctaaccacaccctaacaaaagaaaacgacaagttttaaacataaacaacatattatgaacactaa |
14880070 |
T |
|
| Q |
199 |
caatggtattaggatgaaaattt |
221 |
Q |
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||||||||||||||||||||||| |
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| T |
14880069 |
caatggtattaggatgaaaattt |
14880047 |
T |
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