View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2604_low_22 (Length: 386)
Name: NF2604_low_22
Description: NF2604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2604_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 38933090 - 38933487
Alignment:
| Q |
1 |
atgagttattttattgactgaatttcatagaatatttatacaatttaattgatggaaaagaaagctagttattggtaactaactttctgttttatacaag |
100 |
Q |
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| T |
38933090 |
atgagttattttattgactgaatttgatagaatatttatacaatt-aattgatggaaaagaaagctagttattggtaactaactttctgttttatacaac |
38933188 |
T |
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| Q |
101 |
aa------aaagattatcaaactattttgaattggtctttagtctccttttacactcccttgcaaacgcatggatgaatgattatgaactct--aagttt |
192 |
Q |
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| T |
38933189 |
aagaaaaaaaagattaacaaactattttgaattggtctttggtctccttttacactcccttgcaaactcatggatgaatgattatgaactctttaagttt |
38933288 |
T |
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| Q |
193 |
atagcaacattgaagaactatcacctgaagaaattt-----caacttt----gttcttttgcctgactagattaatagatagtccaaacaaacgtctttt |
283 |
Q |
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| T |
38933289 |
atagcaacattgaagaactatcacctgaagaaatttttattcaatttttattgttcttttgcctgactagattaatagatagtccaaactaacgtctttt |
38933388 |
T |
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| Q |
284 |
ctttgaattcttcttaatatcattttgtctctttttctctgtgataatatattgtgctgtgcattcttcagtatgtgaatgtaacaatttttctttctc |
382 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |
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| T |
38933389 |
ctttgaattcttcttaatatcattttgtctctttttctctgtgataatatattgtgctgtgcattcttcattacgtgaatgtaacaatttttctttctc |
38933487 |
T |
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