View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2604_low_29 (Length: 336)

Name: NF2604_low_29
Description: NF2604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2604_low_29
NF2604_low_29
[»] chr8 (47 HSPs)
chr8 (102-321)||(1255229-1255433)
chr8 (13-101)||(4656074-4656162)
chr8 (13-101)||(7149032-7149120)
chr8 (13-101)||(9458505-9458593)
chr8 (13-101)||(40264275-40264363)
chr8 (13-97)||(10795379-10795463)
chr8 (13-94)||(43604382-43604463)
chr8 (13-95)||(42275942-42276024)
chr8 (13-97)||(1605804-1605888)
chr8 (13-101)||(41385870-41385958)
chr8 (192-303)||(1280537-1280645)
chr8 (15-107)||(38805919-38806010)
chr8 (13-88)||(43489918-43489992)
chr8 (198-322)||(1202898-1203018)
chr8 (36-104)||(30381819-30381887)
chr8 (36-101)||(37566521-37566586)
chr8 (15-101)||(14781248-14781334)
chr8 (15-101)||(18957834-18957920)
chr8 (15-101)||(32498899-32498985)
chr8 (15-100)||(44724898-44724983)
chr8 (13-97)||(35143084-35143168)
chr8 (13-81)||(39371185-39371253)
chr8 (30-97)||(17791584-17791651)
chr8 (15-101)||(16365285-16365371)
chr8 (15-101)||(18305077-18305163)
chr8 (15-101)||(39466634-39466720)
chr8 (15-102)||(4030442-4030530)
chr8 (21-101)||(10128269-10128349)
chr8 (13-97)||(42304745-42304831)
chr8 (15-97)||(19716983-19717067)
chr8 (13-97)||(9209908-9209992)
chr8 (38-102)||(42366920-42366984)
chr8 (15-94)||(43307661-43307740)
chr8 (35-99)||(9287608-9287673)
chr8 (34-102)||(37857903-37857972)
chr8 (13-97)||(14062490-14062574)
chr8 (13-101)||(28620682-28620769)
chr8 (13-48)||(2113786-2113821)
chr8 (15-101)||(20831080-20831166)
chr8 (13-98)||(40012297-40012383)
chr8 (38-103)||(24295744-24295809)
chr8 (15-99)||(31626308-31626392)
chr8 (17-100)||(4302112-4302195)
chr8 (190-247)||(1244554-1244609)
chr8 (55-101)||(34893406-34893452)
chr8 (71-104)||(8502637-8502670)
chr8 (31-60)||(43960087-43960116)
[»] chr7 (42 HSPs)
chr7 (13-101)||(30111791-30111879)
chr7 (13-101)||(152859-152947)
chr7 (13-101)||(12252386-12252474)
chr7 (13-101)||(33475535-33475623)
chr7 (13-101)||(47912524-47912612)
chr7 (13-98)||(27417651-27417736)
chr7 (13-101)||(43056688-43056776)
chr7 (13-88)||(35089110-35089185)
chr7 (13-101)||(34114541-34114629)
chr7 (15-101)||(28343318-28343404)
chr7 (15-100)||(12741381-12741467)
chr7 (15-101)||(23102299-23102385)
chr7 (36-101)||(39300426-39300492)
chr7 (15-101)||(510654-510742)
chr7 (15-101)||(30823595-30823681)
chr7 (36-94)||(47032341-47032399)
chr7 (15-99)||(29613906-29613991)
chr7 (13-101)||(29893962-29894051)
chr7 (15-99)||(30889141-30889225)
chr7 (15-102)||(18839302-18839389)
chr7 (15-98)||(37971509-37971592)
chr7 (15-101)||(3023933-3024018)
chr7 (15-101)||(9881401-9881486)
chr7 (15-101)||(48136362-48136448)
chr7 (15-101)||(39785104-39785192)
chr7 (13-98)||(42677250-42677335)
chr7 (32-101)||(46197105-46197174)
chr7 (36-100)||(36354653-36354716)
chr7 (15-97)||(7994164-7994246)
chr7 (38-100)||(32631550-32631612)
chr7 (15-101)||(39029061-39029147)
chr7 (15-101)||(21068364-21068452)
chr7 (34-101)||(40459833-40459901)
chr7 (15-98)||(46035452-46035536)
chr7 (31-101)||(18916444-18916515)
chr7 (31-100)||(977397-977467)
chr7 (15-98)||(32884761-32884850)
chr7 (15-104)||(37328834-37328924)
chr7 (35-92)||(41061222-41061279)
chr7 (24-60)||(10617396-10617432)
chr7 (15-47)||(26183102-26183134)
chr7 (65-97)||(31495372-31495404)
[»] chr3 (58 HSPs)
chr3 (13-101)||(36054010-36054098)
chr3 (13-101)||(30589843-30589931)
chr3 (13-99)||(46223308-46223394)
chr3 (13-101)||(2124705-2124793)
chr3 (13-101)||(23360575-23360663)
chr3 (13-101)||(23367415-23367503)
chr3 (13-101)||(24149837-24149925)
chr3 (13-101)||(26556865-26556953)
chr3 (13-101)||(38628820-38628908)
chr3 (19-101)||(26292564-26292646)
chr3 (24-99)||(35731864-35731939)
chr3 (13-77)||(50899470-50899534)
chr3 (13-101)||(26004848-26004937)
chr3 (13-101)||(23697969-23698058)
chr3 (13-101)||(23716424-23716513)
chr3 (13-101)||(23734880-23734969)
chr3 (36-102)||(27593967-27594034)
chr3 (13-104)||(45214081-45214172)
chr3 (15-101)||(31645364-31645450)
chr3 (36-98)||(33417086-33417148)
chr3 (15-101)||(36673260-36673346)
chr3 (15-101)||(45254555-45254641)
chr3 (15-101)||(52617087-52617173)
chr3 (13-103)||(23754543-23754635)
chr3 (13-100)||(19551153-19551241)
chr3 (15-101)||(11432555-11432641)
chr3 (15-97)||(44904961-44905043)
chr3 (15-101)||(50902418-50902508)
chr3 (15-99)||(20833906-20833990)
chr3 (9-101)||(27239327-27239418)
chr3 (13-101)||(34290167-34290255)
chr3 (30-101)||(24573433-24573504)
chr3 (37-101)||(28845650-28845716)
chr3 (12-99)||(43152027-43152114)
chr3 (43-100)||(6783189-6783247)
chr3 (15-101)||(10728125-10728213)
chr3 (15-101)||(18750641-18750729)
chr3 (21-97)||(44707951-44708027)
chr3 (15-97)||(10661195-10661278)
chr3 (15-103)||(50761220-50761310)
chr3 (15-84)||(23752520-23752590)
chr3 (15-101)||(17947226-17947314)
chr3 (15-98)||(51736870-51736954)
chr3 (31-101)||(7319104-7319174)
chr3 (30-101)||(35347090-35347161)
chr3 (15-101)||(39841555-39841642)
chr3 (34-101)||(40898095-40898162)
chr3 (15-101)||(54629858-54629947)
chr3 (18-100)||(46251201-46251282)
chr3 (21-87)||(33416998-33417061)
chr3 (15-97)||(39039084-39039168)
chr3 (55-99)||(39337443-39337487)
chr3 (13-101)||(44040901-44040989)
chr3 (31-101)||(995483-995554)
chr3 (30-84)||(1103218-1103273)
chr3 (31-100)||(19254511-19254581)
chr3 (15-60)||(34483246-34483291)
chr3 (37-101)||(36786938-36787005)
[»] scaffold0237 (1 HSPs)
scaffold0237 (13-101)||(20447-20535)
[»] scaffold0153 (1 HSPs)
scaffold0153 (13-101)||(33825-33913)
[»] scaffold0016 (1 HSPs)
scaffold0016 (13-101)||(80793-80881)
[»] chr6 (17 HSPs)
chr6 (13-101)||(3109350-3109438)
chr6 (13-101)||(29864752-29864840)
chr6 (13-101)||(6475743-6475831)
chr6 (15-101)||(7104532-7104618)
chr6 (15-101)||(8790012-8790098)
chr6 (15-101)||(31068428-31068514)
chr6 (36-100)||(35165661-35165725)
chr6 (15-101)||(30384172-30384258)
chr6 (15-101)||(31896645-31896731)
chr6 (15-100)||(14261552-14261637)
chr6 (15-101)||(4199587-4199674)
chr6 (15-81)||(27585205-27585271)
chr6 (65-101)||(10008375-10008411)
chr6 (15-76)||(34774393-34774454)
chr6 (31-101)||(2300149-2300220)
chr6 (55-101)||(7498148-7498194)
chr6 (71-100)||(5958074-5958103)
[»] chr5 (25 HSPs)
chr5 (13-101)||(11632686-11632774)
chr5 (13-103)||(10553437-10553527)
chr5 (13-102)||(10553734-10553823)
chr5 (13-97)||(13949805-13949889)
chr5 (13-101)||(40411415-40411504)
chr5 (13-93)||(18676939-18677019)
chr5 (21-105)||(26629507-26629592)
chr5 (13-101)||(3603460-3603548)
chr5 (13-102)||(13717101-13717190)
chr5 (13-101)||(2275270-2275357)
chr5 (15-101)||(13999214-13999301)
chr5 (13-101)||(40012817-40012906)
chr5 (15-101)||(39853360-39853446)
chr5 (34-101)||(4239580-4239648)
chr5 (15-101)||(13926940-13927027)
chr5 (15-84)||(1459312-1459382)
chr5 (36-101)||(6827952-6828018)
chr5 (15-101)||(7947134-7947220)
chr5 (15-101)||(4549364-4549452)
chr5 (36-97)||(6901360-6901421)
chr5 (15-102)||(17519517-17519604)
chr5 (38-97)||(7858125-7858185)
chr5 (14-45)||(32827897-32827928)
chr5 (15-101)||(1151400-1151486)
chr5 (38-101)||(37014887-37014951)
[»] chr4 (41 HSPs)
chr4 (13-101)||(42315880-42315968)
chr4 (13-101)||(7808996-7809084)
chr4 (13-94)||(8583008-8583089)
chr4 (13-101)||(7820947-7821035)
chr4 (13-96)||(3434832-3434915)
chr4 (13-102)||(42217447-42217535)
chr4 (29-104)||(44930623-44930698)
chr4 (36-101)||(47686842-47686907)
chr4 (15-102)||(23988205-23988292)
chr4 (15-101)||(27769072-27769158)
chr4 (15-101)||(32683135-32683221)
chr4 (15-101)||(38234611-38234697)
chr4 (33-101)||(28846170-28846239)
chr4 (36-101)||(54510581-54510646)
chr4 (13-102)||(56399038-56399126)
chr4 (15-101)||(48262083-48262169)
chr4 (15-101)||(54342155-54342241)
chr4 (13-101)||(5442399-5442485)
chr4 (15-100)||(29649131-29649216)
chr4 (36-98)||(5117836-5117900)
chr4 (15-100)||(32323077-32323163)
chr4 (15-101)||(50019199-50019285)
chr4 (13-100)||(49833973-49834061)
chr4 (13-103)||(25936923-25937012)
chr4 (15-101)||(49500640-49500726)
chr4 (64-101)||(388617-388654)
chr4 (15-99)||(41726114-41726198)
chr4 (13-101)||(52110258-52110345)
chr4 (13-101)||(53272845-53272933)
chr4 (31-101)||(5104965-5105036)
chr4 (15-102)||(48531920-48532007)
chr4 (15-99)||(37827533-37827622)
chr4 (30-101)||(16654196-16654267)
chr4 (31-101)||(42721972-42722042)
chr4 (36-101)||(30966185-30966250)
chr4 (24-99)||(3437128-3437204)
chr4 (31-102)||(25446678-25446750)
chr4 (31-99)||(26340586-26340654)
chr4 (30-101)||(31314423-31314495)
chr4 (24-60)||(36478854-36478890)
chr4 (73-101)||(44929876-44929904)
[»] chr2 (40 HSPs)
chr2 (13-101)||(29941887-29941975)
chr2 (13-101)||(45547913-45548001)
chr2 (13-101)||(7486957-7487045)
chr2 (13-104)||(6288553-6288644)
chr2 (13-101)||(35171381-35171473)
chr2 (15-101)||(25289163-25289249)
chr2 (36-101)||(24192663-24192728)
chr2 (13-98)||(36599148-36599233)
chr2 (15-101)||(18178280-18178366)
chr2 (15-101)||(26789793-26789879)
chr2 (36-101)||(11535695-11535760)
chr2 (15-104)||(28845586-28845675)
chr2 (36-100)||(24935292-24935356)
chr2 (36-100)||(25683985-25684049)
chr2 (13-101)||(2289282-2289370)
chr2 (36-100)||(12135555-12135619)
chr2 (13-97)||(36597649-36597733)
chr2 (15-99)||(43079491-43079576)
chr2 (13-101)||(3464593-3464681)
chr2 (15-95)||(7027913-7027993)
chr2 (13-97)||(27979895-27979979)
chr2 (13-97)||(28066425-28066509)
chr2 (36-99)||(30046606-30046669)
chr2 (36-99)||(30137650-30137713)
chr2 (15-101)||(33136602-33136691)
chr2 (15-84)||(13832685-13832755)
chr2 (13-101)||(10658436-10658524)
chr2 (13-98)||(38821254-38821339)
chr2 (34-101)||(214625-214693)
chr2 (17-97)||(34027781-34027861)
chr2 (17-85)||(35906968-35907036)
chr2 (34-101)||(379935-380004)
chr2 (13-101)||(15283598-15283687)
chr2 (13-89)||(43023524-43023600)
chr2 (13-52)||(14919805-14919844)
chr2 (31-101)||(22551374-22551445)
chr2 (36-102)||(38534541-38534608)
chr2 (36-101)||(20156344-20156410)
chr2 (29-99)||(18175538-18175612)
chr2 (32-100)||(43848205-43848274)
[»] chr1 (37 HSPs)
chr1 (13-101)||(45319473-45319561)
chr1 (13-101)||(52706386-52706474)
chr1 (13-97)||(26881820-26881904)
chr1 (13-98)||(45535755-45535840)
chr1 (13-101)||(14389420-14389508)
chr1 (13-82)||(39758881-39758950)
chr1 (13-82)||(39764235-39764304)
chr1 (36-101)||(36403105-36403170)
chr1 (15-101)||(6313584-6313670)
chr1 (36-101)||(10897662-10897728)
chr1 (15-101)||(25613100-25613186)
chr1 (15-101)||(29395538-29395624)
chr1 (15-101)||(48198955-48199041)
chr1 (15-101)||(48207538-48207624)
chr1 (15-101)||(9321619-9321706)
chr1 (15-102)||(49231992-49232079)
chr1 (15-101)||(20111682-20111768)
chr1 (15-101)||(51702602-51702688)
chr1 (13-101)||(28386558-28386647)
chr1 (17-97)||(1923373-1923453)
chr1 (13-97)||(51825965-51826049)
chr1 (15-98)||(8139980-8140063)
chr1 (39-101)||(33242461-33242524)
chr1 (36-97)||(9174908-9174969)
chr1 (36-101)||(9832738-9832802)
chr1 (13-104)||(19894822-19894913)
chr1 (15-97)||(38535261-38535343)
chr1 (15-97)||(38557479-38557561)
chr1 (32-103)||(48176644-48176716)
chr1 (13-99)||(45273567-45273653)
chr1 (15-83)||(29220120-29220191)
chr1 (21-84)||(23326878-23326941)
chr1 (15-101)||(5494258-5494344)
chr1 (36-101)||(25830360-25830426)
chr1 (30-99)||(4289907-4289976)
chr1 (33-97)||(43556707-43556772)
chr1 (24-84)||(46601419-46601480)
[»] scaffold0940 (1 HSPs)
scaffold0940 (15-101)||(3574-3660)
[»] scaffold0472 (1 HSPs)
scaffold0472 (13-101)||(938-1026)
[»] scaffold0839 (1 HSPs)
scaffold0839 (19-100)||(3114-3196)
[»] scaffold0054 (1 HSPs)
scaffold0054 (15-100)||(36401-36487)
[»] scaffold0042 (1 HSPs)
scaffold0042 (15-101)||(57170-57256)
[»] scaffold0095 (1 HSPs)
scaffold0095 (34-99)||(21800-21865)
[»] scaffold0110 (1 HSPs)
scaffold0110 (34-101)||(38750-38815)


Alignment Details
Target: chr8 (Bit Score: 134; Significance: 1e-69; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 102 - 321
Target Start/End: Complemental strand, 1255433 - 1255229
Alignment:
Q  102 ttatttgtcatggattttaaaagtcttagaaccgcccctagaaaatataattaacattatcaaatatttggggtcattgcttaagggatcattgcttaat 201  Q
    ||||||||||||| | | |||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||||||||| |               |    
T  1255433 ttatttgtcatgggtgtcaaaagtcttagaaccgaccctacaaactataattagcattatcaaatatttggggtcattgcttta---------------t 1255349  T
Q  202 tttgatattttcatcatggacatgatgtatgcctataaatacccttaacacttggaaggaagaaagcaagcccttcaaattgtgttatctctttgaagca 301  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1255348 tttaatattttcatcatggacatgatgtatgcctataaatacccttaacacttggaaggaagaaagcaagcccttcaaattgtgttatctctttgaagca 1255249  T
Q  302 ttaattagtacacaatatat 321  Q
    ||||||||||||||||||||    
T  1255248 ttaattagtacacaatatat 1255229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 4656074 - 4656162
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4656074 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 4656162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 7149032 - 7149120
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7149032 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 7149120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 9458505 - 9458593
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9458505 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 9458593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 40264363 - 40264275
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40264363 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 40264275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 10795463 - 10795379
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10795463 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaataca 10795379  T

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Target: chr8; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 43604463 - 43604382
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaat 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43604463 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaat 43604382  T

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Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 42275942 - 42276024
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaata 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  42275942 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatctaata 42276024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 1605888 - 1605804
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  1605888 aaaatcaatacaatcctgcaaagtcttttaaaatcttcaagattttttctatcaaaacagtattttaaaatctcaatccaataca 1605804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 41385958 - 41385870
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||| |||||||||||||||||||||||||||||||||| |   |||||||||||| |||||||||||||||||||||||||||||||    
T  41385958 aaaattaatacaatccaacaaagtcttttaaaatcttcaaaaaaatttctatcaaaacagtcttttaaaatctcaatccaatacacccc 41385870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 1280645 - 1280537
Alignment:
Q  192 attgcttaattttgatattttcatcatggacatgatgtatgcctataaatacccttaacacttggaaggaagaaagcaagcccttcaaattgtgttatct 291  Q
    ||||| ||||||||||||||| ||||||||| | ||| |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||  |||    
T  1280645 attgcataattttgatatttttatcatggacctcatg-atgcctataaatacccttaacatttggaaggaagaatgcaaacccttcaaattgtgt--tct 1280549  T
Q  292 ctttgaagcatt 303  Q
    ||| ||||||||    
T  1280548 cttagaagcatt 1280537  T

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Target: chr8; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 38806010 - 38805919
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccccttattt 107  Q
    |||||||||||||| | |||||||||||||||||  |||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  38806010 aatcaatacaatcctaaaaagtcttttaaaatctcaaagactttttctaccaaaatagtcttttaaaatctcaatccaatac-ccccttattt 38805919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 43489918 - 43489992
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaa 88  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  43489918 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaga-tttttctatcaaaaaggtcttttaaaatctcaa 43489992  T

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Target: chr8; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 198 - 322
Target Start/End: Complemental strand, 1203018 - 1202898
Alignment:
Q  198 taattttgatattttcatcatggacatgatgtatgcctataaatacccttaacacttggaaggaagaaagcaagcccttcaaattgtgttatctctttga 297  Q
    ||||||| |||||||||||||||||||||   |||||||||||||||||| ||| |||||| |||||| ||||| ||||  ||||||||  ||||||  |    
T  1203018 taattttaatattttcatcatggacatgaa--atgcctataaatacccttcacatttggaatgaagaatgcaagtcctttcaattgtgt--tctcttgaa 1202923  T
Q  298 agcattaattagtacacaatatatt 322  Q
    |||||||||||||||||||||||||    
T  1202922 agcattaattagtacacaatatatt 1202898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 30381887 - 30381819
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccctta 104  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||    
T  30381887 tcttttaaaatcttcaagactttttttgtcaaaatagtcttttaaaatctcaatccaatacacccctta 30381819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 37566586 - 37566521
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||    
T  37566586 tcttttaaaatcttcaagactttttttgtcaaaatagtcttttaaaatctcaatccaatacacccc 37566521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 14781334 - 14781248
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  14781334 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 14781248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 18957920 - 18957834
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  18957920 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 18957834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 32498899 - 32498985
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  32498899 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 32498985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 44724983 - 44724898
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  ||||||||||||||    
T  44724983 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacaccc 44724898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 35143084 - 35143168
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||||||||||||  ||| |||||||||||||||  ||||||| || |||||||||||||||||| ||||| |||||||||||    
T  35143084 aaaatcaatacaatcttacagagtcttttaaaatctcaaagatttcttttatcaaaatagtcttttacaatcttaatccaataca 35143168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 39371253 - 39371185
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaa 81  Q
    |||||||||||||||||||||||||||||||||||||||| |   |||||||||||| |||||||||||    
T  39371253 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaaaaaatttctatcaaaacagtcttttaaa 39371185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 17791584 - 17791651
Alignment:
Q  30 acaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    ||||| |||||||||||||| ||||  ||||| |||||||||||||||||||||||||||||||||||    
T  17791584 acaaaatcttttaaaatctttaagacattttcaatcaaaatagtcttttaaaatctcaatccaataca 17791651  T

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Target: chr8; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 16365285 - 16365371
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  |||||||||||||||||||| |||| ||||| ||| ||||| |||||||||||||  ||| |||||||||||    
T  16365285 aatcaatacaatcgcacaaagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcctaattcaatacacccc 16365371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 18305163 - 18305077
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| ||||| |||||||||||||  |||||||||||||||    
T  18305163 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcctaatccaatacacccc 18305077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 39466720 - 39466634
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||   ||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||||||| |||||||||||||||    
T  39466720 aatcaatacaatatcacagagtcttttaaaatcttaaagactttttttattaaaataatcttttaaaatcttaatccaatacacccc 39466634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 4030530 - 4030442
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    |||||||||||||  ||| |||||||||||||||| |||| |||||| ||| |||||||||||||||||||  |||| |||||||||||    
T  4030530 aatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatctaatacacccct 4030442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 10128269 - 10128349
Alignment:
Q  21 tacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||| ||||| || ||||||||||| |||| |||||  ||||||||| ||||||||| |||||||||||||||||||    
T  10128269 tacaatcctacaaaatcatttaaaatcttgaagacttttttaatcaaaataatcttttaaattctcaatccaatacacccc 10128349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 42304831 - 42304745
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaga--ttttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||||||||||||  ||| |||||||||||||||| ||||  |||||| ||| |||||||||||||||||||  |||||||||||    
T  42304831 aaaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttttattaaaatagtcttttaaaatcctaatccaataca 42304745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 19717067 - 19716983
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga--ttttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||||||||||  ||| |||||||||||||||| ||||  |||||| ||| |||||||||||||||||||  |||||||||||    
T  19717067 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttttattaaaatagtcttttaaaatcctaatccaataca 19716983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 9209908 - 9209992
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||||||||||||||||||| ||| |||||||    
T  9209908 aaaatcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatcttaattcaataca 9209992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 42366920 - 42366984
Alignment:
Q  38 ttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    ||||||||||||||| |    |||||||||||||||| |||||||||||||||||||||||||||    
T  42366920 ttttaaaatcttcaaaaaaaattctatcaaaatagtcatttaaaatctcaatccaatacacccct 42366984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 43307740 - 43307661
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaat 94  Q
    ||||||| |||||  ||| |||||||||||||||| |||| | ||| ||| |||||||||||||||||||| ||||||||    
T  43307740 aatcaatccaatctcacacagtcttttaaaatcttaaagactctttttattaaaatagtcttttaaaatcttaatccaat 43307661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 9287673 - 9287608
Alignment:
Q  35 gtcttttaaaatcttcaagattttttct-atcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    ||||||||||||||| |||||||||| | || |||||||||||||||||||  |||||||||||||    
T  9287673 gtcttttaaaatcttaaagatttttttttattaaaatagtcttttaaaatcctaatccaatacacc 9287608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 37857903 - 37857972
Alignment:
Q  34 agtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    |||||||||||||||| |||  |||||| ||| |||||||||||||||||||  ||||||||||||||||    
T  37857903 agtcttttaaaatcttaaagtcttttttttattaaaatagtcttttaaaatcctaatccaatacacccct 37857972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 14062490 - 14062574
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||||||| ||||  ||||||||||||||||||| || |||||| | | |||||||| ||| ||||||||  |||||||||||    
T  14062490 aaaatcaatagaatcacacaaagtcttttaaaatctgcaggattttgtttttcaaaataatctcttaaaatcctaatccaataca 14062574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 28620682 - 28620769
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||  ||||| | |||||||||||| |||||||||| |  ||||| | ||||| ||||||||||| |||||||||||    
T  28620682 aaaatcaatacaatcacacaaaattttttaaaatctttaagatttttt-tgccaaaacaatctttcaaaatctcaattcaatacacccc 28620769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 2113786 - 2113821
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatct 48  Q
    ||||||||||||||||||||||||||||||||||||    
T  2113786 aaaatcaatacaatccaacaaagtcttttaaaatct 2113821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 20831166 - 20831080
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| |||||| |||  ||||||||||||||||||  ||| |||||||||||    
T  20831166 aatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttat-taaatagtcttttaaaatcctaattcaatacacccc 20831080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 40012383 - 40012297
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattt-tttctatcaaaatagtcttttaaaatctcaatccaatacac 98  Q
    |||||| ||||||||  ||||| |||||||||||||  |||| || ||| ||| |||||||| ||||||||||| ||||||||||||    
T  40012383 aaaatcgatacaatctcacaaactcttttaaaatctcaaagacttgtttttattaaaatagtattttaaaatcttaatccaatacac 40012297  T

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Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 24295809 - 24295744
Alignment:
Q  38 ttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccctt 103  Q
    ||||||||||||||| | ||||  || ||||||||||||||||||||| |||| |||||| |||||    
T  24295809 ttttaaaatcttcaaaacttttattaccaaaatagtcttttaaaatctaaatctaatacatccctt 24295744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 31626308 - 31626392
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||||||||||  ||| | |||||||||||||| || | ||||| ||| |||||||| ||||||||||  |||||||| ||||    
T  31626308 aatcaatacaatctcacacaatcttttaaaatcttaaatactttttttattaaaatagtgttttaaaatcctaatccaatgcacc 31626392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 4302195 - 4302112
Alignment:
Q  17 tcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||| ||||  ||||| |||||||||||||| |  ||||| | |   |||||||||||||||| ||||||||||||||||||    
T  4302195 tcaatataatctcacaaaatcttttaaaatctttagcattttattttctaaaatagtcttttaaattctcaatccaatacaccc 4302112  T

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Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 1244609 - 1244554
Alignment:
Q  190 tcattgcttaattttgatattttcatcatggacatgatgtatgcctataaataccctt 247  Q
    ||||||| |||||||||||||||||||||||||  ||   ||||||||||||||||||    
T  1244609 tcattgcgtaattttgatattttcatcatggactcga--aatgcctataaataccctt 1244554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 34893406 - 34893452
Alignment:
Q  55 ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  34893406 ttttttttattaaaatagtcttttaaaatcctaatccaatacacccc 34893452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 8502670 - 8502637
Alignment:
Q  71 agtcttttaaaatctcaatccaatacacccctta 104  Q
    ||||||||||||||||||||||||||| ||||||    
T  8502670 agtcttttaaaatctcaatccaatacatccctta 8502637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 43960087 - 43960116
Alignment:
Q  31 caaagtcttttaaaatcttcaagatttttt 60  Q
    ||||||||||||||||||||||||||||||    
T  43960087 caaagtcttttaaaatcttcaagatttttt 43960116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 7e-43; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 30111791 - 30111879
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30111791 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 30111879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 152859 - 152947
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  152859 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 152947  T

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Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 12252474 - 12252386
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  12252474 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacaatcttttaaaatctcaatccaatacacccc 12252386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 33475535 - 33475623
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  33475535 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcaaatacacccc 33475623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 47912612 - 47912524
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  47912612 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatatacccc 47912524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 27417736 - 27417651
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacac 98  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27417736 aaaatcaatacaatctaacaaagtcttttaaaatcttcaagattttttctatcaaaatactcttttaaaatctcaatccaatacac 27417651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 43056776 - 43056688
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||    
T  43056776 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacattcttttaaaatctcaattcaatacacccc 43056688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 35089185 - 35089110
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaa 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35089185 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaa 35089110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 34114629 - 34114541
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||| ||||||| |||||| ||||||||||||||||    
T  34114629 aaaatcaatacaatcacacaaagtcttttaaaatctttaagattttttctgccaaaacagtctttcaaaatcccaatccaatacacccc 34114541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 28343318 - 28343404
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  28343318 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcccaatccaatacacccc 28343404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 12741381 - 12741467
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||  ||| |||||||||||||||| |||| |||||| ||| |||||||||||||||||||| ||||||||||||||    
T  12741381 aatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcttaatccaatacaccc 12741467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 23102299 - 23102385
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  23102299 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 23102385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 39300492 - 39300426
Alignment:
Q  36 tcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||    
T  39300492 tcttttaaaatcttcaagacttttttttgtcaaaatagtcttttaaaatctcaatccaatacacccc 39300426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 510654 - 510742
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga--ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| ||||  |||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  510654 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttttattaaaatagtcttttaaaatcccaatccaatacacccc 510742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 30823595 - 30823681
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  ||| |||||||||||    
T  30823595 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaattcaatacacccc 30823681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 47032341 - 47032399
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaat 94  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  47032341 tcttttaaaatcttcaagactttatttatcaaaatagtcttttaaaatctcaatccaat 47032399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 29613991 - 29613906
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||||||||||  ||| |||||||||||||||| |||| |||||| ||| |||||||||||||||||||  |||||||||||||    
T  29613991 aatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacacc 29613906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 29893962 - 29894051
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||  ||| | |||||||||||||| |||| |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  29893962 aaaatcaatacaatctcacacaatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacacccc 29894051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 30889225 - 30889141
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||| | ||||| || ||||||||||||||||  ||||||||||||| ||||| ||| |||||||||| ||||||||||||||    
T  30889225 aatcaacataatcctaccaagtcttttaaaatctcaaagattttttctaccaaaacagttttttaaaatcccaatccaatacacc 30889141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 18839302 - 18839389
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    |||||||||||||  ||| | |||||||||||||| |||| ||||| ||| |||||| ||||||||||||  ||||||||||||||||    
T  18839302 aatcaatacaatctcacacaatcttttaaaatcttaaagactttttttattaaaataatcttttaaaatcctaatccaatacacccct 18839389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 37971592 - 37971509
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacac 98  Q
    |||||||||||||  |||  ||||||||||||||| |||| ||||| ||| |||||||||||||||||||  ||||||||||||    
T  37971592 aatcaatacaatctcacacggtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacac 37971509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 3023933 - 3024018
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| || | ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  3023933 aatcaatacaatctcacacagtcttttaaaatcttaaaaacttttt-tattaaaatagtcttttaaaatcctaatccaatacacccc 3024018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 9881486 - 9881401
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| ||||| |||||||||||||  |||||||||||||||    
T  9881486 aatcaatacaatctcacacagtcttttaaaatcttaaagaattttt-tattaaaattgtcttttaaaatcctaatccaatacacccc 9881401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 48136448 - 48136362
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| | | |||||||||||| |||||||||| ||| |||||||||||||||||||  ||||||||| |||||    
T  48136448 aatcaatacaatctcacacaatattttaaaatcttgaagattttttttattaaaatagtcttttaaaatcctaatccaatatacccc 48136362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 39785104 - 39785192
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga--ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||   || |||||||||||||||| ||||  |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  39785104 aatcaatacaatctcgcacagtcttttaaaatcttaaagactttttttttattaaaatagtcttttaaaatcctaatccaatacacccc 39785192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 42677335 - 42677250
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacac 98  Q
    |||||||||||||||  ||||| |||||||||||||| |||||||||| |  ||||| | ||||  ||||||||||||||||||||    
T  42677335 aaaatcaatacaatcacacaaaatcttttaaaatctttaagattttttttgccaaaacaatcttgcaaaatctcaatccaatacac 42677250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 46197174 - 46197105
Alignment:
Q  32 aaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||| ||| ||||| | | |||||| | |||||||||||||||||||||||||||||    
T  46197174 aaagtcttttaaaatctccaatattttatttgtcaaaacaatcttttaaaatctcaatccaatacacccc 46197105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 36354716 - 36354653
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||||| || ||||| ||||||||||||||||||||||||||||  |||||||||    
T  36354716 tcttttaaaatcttcatgacttttt-tatcaaaatagtcttttaaaatctcaatttaatacaccc 36354653  T

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Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 7994164 - 7994246
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||| | ||| |||||| ||||||||||||  |||||||||||    
T  7994164 aatcaatacaatctcacacagtcttttaaaatcttaaagactttctttattaaaatactcttttaaaatcctaatccaataca 7994246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 32631550 - 32631612
Alignment:
Q  38 ttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||| || ||||| |  ||||||||||||| ||||||||||||||||||||||    
T  32631550 ttttaaaatcttcatgactttttttgccaaaatagtctttcaaaatctcaatccaatacaccc 32631612  T

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Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 39029061 - 39029147
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| | | |||||||||||| |||| ||||| ||| |||||| ||||||||||||  |||||||||||||||    
T  39029061 aatcaatacaatcttacacaatattttaaaatcttaaagactttttttattaaaataatcttttaaaatcctaatccaatacacccc 39029147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 21068364 - 21068452
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga--ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||| |||||||| || ||||  |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  21068364 aatcaatacaatctcacacagtcatttaaaattttaaagactttttttttattaaaatagtcttttaaaatcctaatccaatacacccc 21068452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 40459901 - 40459833
Alignment:
Q  34 agtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||| |||| |||||| ||| ||||||||||||||||||   |||||||||||||||    
T  40459901 agtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaattctaatccaatacacccc 40459833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 46035536 - 46035452
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatctt-caagattttttctatcaaaatagtcttttaaaatctcaatccaatacac 98  Q
    |||||||||||| | ||||||||||||||||||||  || | ||||| | | |||||||||||||||||||  ||||||||||||    
T  46035536 aatcaatacaattccacaaagtcttttaaaatcttaaaaaactttttttgttaaaatagtcttttaaaatcctaatccaatacac 46035452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 18916515 - 18916444
Alignment:
Q  31 caaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||| ||||||  |  ||||| ||| |||||||||  |||||||||||||||    
T  18916515 caaagtcttttaaaatcttcaagacttttttaaacaaaaattgtcctttaaaatcataatccaatacacccc 18916444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 977397 - 977467
Alignment:
Q  31 caaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||||||||||||| ||||||  |  ||||| |||||||||||||  || |||||||||||    
T  977397 caaagtcttttaaaatcttcaagacttttttaaacaaaaattgtcttttaaaatcctaaaccaatacaccc 977467  T

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Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 32884761 - 32884850
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttct------atcaaaatagtcttttaaaatctcaatccaatacac 98  Q
    ||||||||||||   ||| |||||||||||||||| |||| ||||| |      || |||||||||||||||||||| ||||||||||||    
T  32884761 aatcaatacaatttcacacagtcttttaaaatcttaaagacttttttttttattattaaaatagtcttttaaaatcttaatccaatacac 32884850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 37328834 - 37328924
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttct-atcaaaatagtcttttaaaatctcaatccaatacacccctta 104  Q
    |||||||||||||  ||| |||| ||| ||||||| ||  |||||| | || ||||||||||||||||||   ||||||||||||||||||    
T  37328834 aatcaatacaatctcacacagtccttttaaatcttaaatttttttttttattaaaatagtcttttaaaattctaatccaatacacccctta 37328924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 41061222 - 41061279
Alignment:
Q  35 gtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatcca 92  Q
    |||||||||||||| ||||||||| | |  |||||||||||||| ||||| |||||||    
T  41061222 gtcttttaaaatctgcaagattttgtttgccaaaatagtcttttgaaatcccaatcca 41061279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 10617396 - 10617432
Alignment:
Q  24 aatccaacaaagtcttttaaaatcttcaagatttttt 60  Q
    ||||| || ||||||||||||||||||||||||||||    
T  10617396 aatcctacgaagtcttttaaaatcttcaagatttttt 10617432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 26183102 - 26183134
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatc 47  Q
    |||||||||||||| ||||||||||||||||||    
T  26183102 aatcaatacaatcccacaaagtcttttaaaatc 26183134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 31495372 - 31495404
Alignment:
Q  65 caaaatagtcttttaaaatctcaatccaataca 97  Q
    ||||||||| |||||||||||||||||||||||    
T  31495372 caaaatagtattttaaaatctcaatccaataca 31495404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 7e-43; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 36054098 - 36054010
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36054098 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 36054010  T

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Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 30589843 - 30589931
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30589843 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 30589931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 46223394 - 46223308
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  46223394 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaattcaatacacc 46223308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 2124793 - 2124705
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  2124793 aaaatcaatacaatccaacaaagtcttttaaaattttcaagattttttttatcaaaacagtcttttaaaatctcaatccaatacacccc 2124705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 23360575 - 23360663
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||    
T  23360575 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttatatcaaaacagtcttttagaatctcaatccaatacacccc 23360663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 23367415 - 23367503
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||    
T  23367415 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttatatcaaaacagtcttttagaatctcaatccaatacacccc 23367503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 24149925 - 24149837
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24149925 aaaatcaatataatccaacaaagtcatttaaaatcttcaagattttttctatcaaaatagtcttttaaaatcttaatccaatacacccc 24149837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 26556865 - 26556953
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26556865 aaaatcaatacaatcgaacaaagtcttttaaaatctttaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 26556953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 38628908 - 38628820
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38628908 aaaatcaatacaattcaacaaagtcttttaaaattttcaagattttttctatcaaaagagtcttttaaaatctcaatccaatacacccc 38628820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 26292646 - 26292564
Alignment:
Q  19 aatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  26292646 aatacaatccaacaaagtcttttaaaatcttcaagatattttctatcaaaacagtcttttaaaatctcaatccaatacacccc 26292564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 35731864 - 35731939
Alignment:
Q  24 aatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  35731864 aatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacaatctgttaaaatctcaatccaatacacc 35731939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 50899534 - 50899470
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttt 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50899534 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttt 50899470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 26004937 - 26004848
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagatttttt-ctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||| ||||||| ||| ||||||| || |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  26004937 aaaatcaatacaattcaacaaactctcttaaaatatttaagatttttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 26004848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 23697969 - 23698058
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagatttt-ttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||||||||| | |   ||||||||||| | | |||||||||||||||||||||||||||    
T  23697969 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaaaataaattctatcaaaacaatgttttaaaatctcaatccaatacacccc 23698058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 23716424 - 23716513
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagatttt-ttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||||||||| | |   ||||||||||| | | |||||||||||||||||||||||||||    
T  23716424 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaaaataaattctatcaaaacaatgttttaaaatctcaatccaatacacccc 23716513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 23734880 - 23734969
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagatttt-ttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||||||||| | |   ||||||||||| | | |||||||||||||||||||||||||||    
T  23734880 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaaaataaattctatcaaaacaatgttttaaaatctcaatccaatacacccc 23734969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 27593967 - 27594034
Alignment:
Q  36 tcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    ||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||    
T  27593967 tcttttaaaatcttcaagacttttttttgtcaaaatagtcttttaaaatctcaatccaatacacccct 27594034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 45214172 - 45214081
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccctta 104  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||| |  ||||| | ||||| ||||||||||||||||||||| ||||    
T  45214172 aaaatcaatacaatcacacaaagtcttttaaaatctttaagattttttttgccaaaacaatctttcaaaatctcaatccaatacacctctta 45214081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 31645450 - 31645364
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  31645450 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcttaatccaatacacccc 31645364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 33417086 - 33417148
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacac 98  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  33417086 tcttttaaaattttcaagactttttcaatcaaaatagtcttttaaaatctcaatccaatacac 33417148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 36673346 - 36673260
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  36673346 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 36673260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 45254641 - 45254555
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||||||||| ||| |||||||||||||||||||  |||| ||||||||||    
T  45254641 aatcaatacaatctcacacagtcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatcctaatctaatacacccc 45254555  T

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Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 52617173 - 52617087
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  |||||||||||||||||||| |||| ||||| ||| ||||| |||||||||||||  |||||||||||||||    
T  52617173 aatcaatacaatctcacaaagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcctaatccaatacacccc 52617087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 23754543 - 23754635
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttc--aagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccctt 103  Q
    ||||||||||||||||||||||||||||||||||||||  || |     |||||||| ||| |||||||||||||||||||||||||||||||    
T  23754543 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaaaaaaaaaatctatcaacataatcttttaaaatctcaatccaatacacccctt 23754635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 19551241 - 19551153
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttt-tctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||||||| ||||||||||||||||||||| |      |||||||||| ||||||||||||||||||||||||||||||    
T  19551241 aaaatcaatacaatccaataaagtcttttaaaatcttcaaaaaaaaactctatcaaaacagtcttttaaaatctcaatccaatacaccc 19551153  T

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Target: chr3; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 11432555 - 11432641
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| ||||||||||||| || |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  11432555 aatcaatacaatctcacacagtcttttaaaattttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 11432641  T

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Target: chr3; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 44905043 - 44904961
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||||||||||  ||| |||||||||||||||| ||||  |||| ||| |||||||||||||||||||| |||||||||||    
T  44905043 aatcaatacaatctcacacagtcttttaaaatcttaaagaccttttttattaaaatagtcttttaaaatcttaatccaataca 44904961  T

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Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 50902508 - 50902418
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga----ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| ||||    |||||| ||| |||||||||||||||||||| |||||||||||||||    
T  50902508 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttttttattaaaatagtcttttaaaatcttaatccaatacacccc 50902418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 20833906 - 20833990
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||||||||||  ||| | |||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||    
T  20833906 aatcaatacaatcttacacaatcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacc 20833990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 27239418 - 27239327
Alignment:
Q  9 gaagaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||| |||||||||||||  ||| |||||||||||||||| ||  |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  27239418 gaagacaatcaatacaatcttacacagtcttttaaaatcttaaaactttttt-tattaaaatagtcttttaaaatcctaatccaatacacccc 27239327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 34290255 - 34290167
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||  ||||||||||||||||||| || |||||| | |  ||||||| |||||| ||||| ||||||||||||||||    
T  34290255 aaaatcaatacaatcacacaaagtcttttaaaatctgcaggattttatttgccaaaataatcttttgaaatcccaatccaatacacccc 34290167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 24573504 - 24573433
Alignment:
Q  30 acaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||| |||||| | |  ||||||| |||||||||||| ||||||||||||||||    
T  24573504 acaaagtcttttaaaatcttcaggattttgtttgccaaaataatcttttaaaatcccaatccaatacacccc 24573433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 28845650 - 28845716
Alignment:
Q  37 cttttaaaatcttcaaga--ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||  |||||| | ||||||||||||||||||| ||||||||||||||||||    
T  28845650 cttttaaaatcttcaagactttttttttgtcaaaatagtcttttaaaacctcaatccaatacacccc 28845716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 43152027 - 43152114
Alignment:
Q  12 gaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||| |||||| ||| ||| | ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||||||||||    
T  43152027 gaaaattaatacattcctacacaatcttttaaaatcttcaagactttgtttgctaaaatagtcttttaaaatctcaatccaatacacc 43152114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 6783247 - 6783189
Alignment:
Q  43 aaatcttcaagattttttct-atcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||    
T  6783247 aaatcttcaagatttttttttatcaaaatagtcttttaaaatttcaatccaatacaccc 6783189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 10728213 - 10728125
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga--ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| | |||||||||||||| ||||  |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  10728213 aatcaatacaatctcacacattcttttaaaatcttaaagactttttttttattaaaatagtcttttaaaatcctaatccaatacacccc 10728125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 18750641 - 18750729
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga--ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| ||||  |||||| ||| |||||||||||||||||||  ||| |||||||||||    
T  18750641 aatcaatacaatctcacacagtcttttaaaatcttaaagattttttttttattaaaatagtcttttaaaatcctaattcaatacacccc 18750729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 44707951 - 44708027
Alignment:
Q  21 tacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||||  |||||||||||||||||||| |||||||||| ||| |||||| ||||||||||||  ||| |||||||    
T  44707951 tacaatctcacaaagtcttttaaaatcttaaagattttttttattaaaataatcttttaaaatcataattcaataca 44708027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 10661195 - 10661278
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||||||||||  ||| | |||||||||||||| |||| |||||| ||| |||||||||||||||||||  |||||||||||    
T  10661195 aatcaatacaatctcacacaatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaataca 10661278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 50761310 - 50761220
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga--ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccctt 103  Q
    |||||||||||||  ||| | |||||||||||||| ||||  |||||| ||| ||||||||||||||| |||  |||||||||||||||||    
T  50761310 aatcaatacaatctcacacaatcttttaaaatcttaaagactttttttttattaaaatagtcttttaatatcctaatccaatacacccctt 50761220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 23752590 - 23752520
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatc 84  Q
    |||||||||||||  ||| |||||||||||||||| |||| |||||| ||| |||||||||||||||||||    
T  23752590 aatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatc 23752520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 17947226 - 17947314
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaa-gattttttct-atcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| ||||||||||||| || || |||||||| | || |||||||||||||||||||  |||||||||||||||    
T  17947226 aatcaatacaatctcacatagtcttttaaaattttaaaagatttttttttattaaaatagtcttttaaaatcctaatccaatacacccc 17947314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 51736954 - 51736870
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacac 98  Q
    |||||||||||||   || |||||||||||||||| |||| |||||| ||| |||||||| ||||||||||  ||||||||||||    
T  51736954 aatcaatacaatctcgcatagtcttttaaaatcttaaagacttttttttattaaaatagtattttaaaatcctaatccaatacac 51736870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 7319104 - 7319174
Alignment:
Q  31 caaagtcttttaaaatcttcaagattttttctat-caaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||  ||||||||||| ||| |||||| |||||||||||||  |||||||||||||||    
T  7319104 caaagtcttttaaaatccacaagatttttt-tatacaaaattgtcttttaaaatcctaatccaatacacccc 7319174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 35347161 - 35347090
Alignment:
Q  30 acaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||| |||||  | |  |||||||||||  ||||||||||||| ||||||||||    
T  35347161 acaaagtcttttaaaatcttcaggatttagtttgccaaaatagtctgataaaatctcaatcaaatacacccc 35347090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 39841642 - 39841555
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagatttt-ttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||   || |||||||||||||||| |||| ||| || ||| |||||||||||||||||||  ||| |||||||||||    
T  39841642 aatcaatacaatctcgcacagtcttttaaaatcttaaagactttcttttattaaaatagtcttttaaaatcataattcaatacacccc 39841555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 40898095 - 40898162
Alignment:
Q  34 agtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||| |||| ||||| ||| ||||||||||||||||||   |||| ||||||||||    
T  40898095 agtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaattctaatcgaatacacccc 40898162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 54629858 - 54629947
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga---ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||| ||||| ||||   |||||| ||| ||||| |||||||||||||  |||||||||||||||    
T  54629858 aatcaatacaatctcacacagtcttttaacatcttaaagacttttttttttattaaaattgtcttttaaaatcctaatccaatacacccc 54629947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 46251282 - 46251201
Alignment:
Q  18 caatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    ||||||||||  |||||||||||||||||||| |||||||||| |  ||||| | || || ||||||||||| ||||||||||    
T  46251282 caatacaatcacacaaagtcttttaaaatctttaagatttttt-tgccaaaacaatccttcaaaatctcaattcaatacaccc 46251201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 33416998 - 33417061
Alignment:
Q  21 tacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctca 87  Q
    |||||||| | ||| |||||||||||||||||||||||||| |||||   | |||||||||||||||    
T  33416998 tacaatcctataaaatcttttaaaatcttcaagattttttcaatcaa---attcttttaaaatctca 33417061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 39039084 - 39039168
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatctt-caaga-ttttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||||||||||  |||||||| |||||||||||  |||| |||||| ||| ||||| |||||||||||||  |||||||||||    
T  39039084 aatcaatacaatctcacaaagtcatttaaaatcttaaaagacttttttttattaaaattgtcttttaaaatcataatccaataca 39039168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 39337487 - 39337443
Alignment:
Q  55 ttttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||    
T  39337487 ttttttttatcaaaataatcttttaaaatctcaatccattacacc 39337443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 44040989 - 44040901
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||| ||||   |||| ||||||||||||||||  || || | |  ||||||||||| ||||||||| |||||||||||||||    
T  44040989 aaaatcaatataatctcgcaaaatcttttaaaatcttcagaatcttgtttgacaaaatagtctcttaaaatcttaatccaatacacccc 44040901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 995554 - 995483
Alignment:
Q  31 caaagtcttttaaaatcttcaagattttttctatc-aaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||| ||||||||||||  | | ||||| ||| |||||||||  |||||||||||||||    
T  995554 caaagtcttttaaaatcctcaagatttttttaaacaaaaattgtcctttaaaatcctaatccaatacacccc 995483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 1103218 - 1103273
Alignment:
Q  30 acaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatc 84  Q
    ||||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||    
T  1103218 acaaagtcttttaaattcttctagatttttttctattaaaatagtctcttaaaatc 1103273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 19254511 - 19254581
Alignment:
Q  31 caaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||||||||||||| ||||||  |  ||||| ||| |||||||||  ||||||||||||||    
T  19254511 caaagtcttttaaaatcttcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 19254581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 34483291 - 34483246
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagatttttt 60  Q
    |||||||||||||  ||| |||||||||||||||| ||||||||||    
T  34483291 aatcaatacaatctcacacagtcttttaaaatcttaaagatttttt 34483246  T

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Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 36786938 - 36787005
Alignment:
Q  37 cttttaaaatcttcaagattttttctatcaaaatagtcttttaaa---atctcaatccaatacacccc 101  Q
    |||||||||||||||| ||||| | |  |||||||||||||||||    |||||||||||||||||||    
T  36786938 cttttaaaatcttcaaaattttgttttccaaaatagtcttttaaatatttctcaatccaatacacccc 36787005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 20535 - 20447
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20535 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 20447  T

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Target: scaffold0153 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 33913 - 33825
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33913 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaaaagtcttttaaaatctcaatccaatacacccc 33825  T

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Target: scaffold0016 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 80881 - 80793
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  80881 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaaaagtcttttaaaatctcaatccaatacacccc 80793  T

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Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 3109438 - 3109350
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3109438 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 3109350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 29864840 - 29864752
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29864840 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 29864752  T

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Target: chr6; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 6475831 - 6475743
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  6475831 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaattcaatacacccc 6475743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 7104532 - 7104618
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||| | | |||| ||||||||||||||  |||||||||||||||    
T  7104532 aatcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatcctaatccaatacacccc 7104618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 8790098 - 8790012
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||| | | |||| ||||||||||||||  |||||||||||||||    
T  8790098 aatcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatcctaatccaatacacccc 8790012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 31068428 - 31068514
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  31068428 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 31068514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 35165661 - 35165725
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||    
T  35165661 tcttttaaaatcttcatgactttttttaccaaaatagtcttttaaaatctcaatccaatacaccc 35165725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 30384258 - 30384172
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||  ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  30384258 aatcaatacaatctcacacagtcttttaaaatcttaaaggctttttttattaaaatagtcttttaaaatcctaatccaatacacccc 30384172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 31896645 - 31896731
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| ||| |||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  31896645 aatcaatacaatctcacacagtattttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 31896731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 14261637 - 14261552
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| ||||| |||||||||||||  ||||||||||||||    
T  14261637 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcataatccaatacaccc 14261552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 4199674 - 4199587
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaa-gattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| || || ||||| ||| |||||||| ||||||||||  |||||||||||||||    
T  4199674 aatcaatacaatctcacacagtcttttaaaatcttaaaagactttttttattaaaatagtgttttaaaatcctaatccaatacacccc 4199587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 27585271 - 27585205
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaa 81  Q
    |||||||| ||||  ||| |||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  27585271 aatcaataaaatctcacacagtcttttaaaatcttaaagattttttttattaaaatagtcttttaaa 27585205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 10008411 - 10008375
Alignment:
Q  65 caaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||||||    
T  10008411 caaaatagtcttttaaaatctcaatccaatacacccc 10008375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 34774393 - 34774454
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtctt 76  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||    
T  34774393 aatcaatacaatcttacacagtcttttaaaatcttaaagactttttttattaaaatagtctt 34774454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 2300220 - 2300149
Alignment:
Q  31 caaagtcttttaaaatcttcaagattttttctatc-aaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||| ||||||||||||  | | ||||| ||| |||||||||  |||||||||||||||    
T  2300220 caaagtcttttaaaatcctcaagatttttttaaacaaaaattgtcctttaaaatcctaatccaatacacccc 2300149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 7498148 - 7498194
Alignment:
Q  55 ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  7498148 ttttttttattaaaatagtcttttaaaatcctaatccaatacacccc 7498194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 100
Target Start/End: Original strand, 5958074 - 5958103
Alignment:
Q  71 agtcttttaaaatctcaatccaatacaccc 100  Q
    ||||||||||||||||||||||||||||||    
T  5958074 agtcttttaaaatctcaatccaatacaccc 5958103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 11632774 - 11632686
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11632774 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 11632686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 10553527 - 10553437
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccctt 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  10553527 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtctttttaaatctcaatccaatacacccctt 10553437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 10553734 - 10553823
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10553734 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacatccct 10553823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 13949889 - 13949805
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13949889 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaataca 13949805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 40411415 - 40411504
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  40411415 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagatttttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 40411504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 18677019 - 18676939
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaa 93  Q
    ||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18677019 aaaatcactacaatacaacaaaatcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaa 18676939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 26629592 - 26629507
Alignment:
Q  21 tacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca-ccccttat 105  Q
    |||||||| ||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  26629592 tacaatcctacaaaatcttttaaaattttcaagactttttcaatcaaaatagtcttttaaaatctcaatccaatacagccccttat 26629507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 3603548 - 3603460
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||||||||| |   |||||||||||| ||||||||||||| |||||| ||||| ||||    
T  3603548 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaaaaaatttctatcaaaacagtcttttaaaatttcaatctaatacccccc 3603460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 13717101 - 13717190
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    |||||||||||||||  ||| | |||||||||||||| |||| ||||| ||| |||||||||||||||||||  ||||||||||||||||    
T  13717101 aaaatcaatacaatctcacacaatcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccct 13717190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 2275357 - 2275270
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||  |||||||||||||||||||| |||||| ||| | || ||||| |||||||||||| ||||||||||||||||    
T  2275357 aaaatcaatacaatcacacaaagtcttttaaaatctttaagattcttt-tttccaaataatcttttaaaatcccaatccaatacacccc 2275270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 13999301 - 13999214
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  13999301 aatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacacccc 13999214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 40012906 - 40012817
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||  |||  ||||||||||||||| |||| |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  40012906 aaaatcaatacaatctcacactgtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacacccc 40012817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 39853360 - 39853446
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||  |||| ||||| ||| ||||||||||||||||||   |||||||||||||||    
T  39853360 aatcaatacaatctcacagagtcttttaaaatctaaaagactttttatattaaaatagtcttttaaaattctaatccaatacacccc 39853446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 4239648 - 4239580
Alignment:
Q  34 agtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||| |||| |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  4239648 agtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacacccc 4239580  T

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Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 13926940 - 13927027
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttt-tctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||| ||||||| |||| |||| | ||| |||||||||||||||||||  |||||||||||||||    
T  13926940 aatcaatacaatctcacacagtctttttaaatcttaaagacttttatttattaaaatagtcttttaaaatcctaatccaatacacccc 13927027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 1459382 - 1459312
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatc 84  Q
    |||||||||||||  ||| |||||||||||||||| |||| |||||| ||| |||||||||||||||||||    
T  1459382 aatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatc 1459312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 6828018 - 6827952
Alignment:
Q  36 tcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||| |||||||| | |||||| | |||||||| |||||||||||||||||||||||||||||    
T  6828018 tcttttaagatcttcaaaacttttttttgtcaaaataatcttttaaaatctcaatccaatacacccc 6827952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 7947220 - 7947134
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  |||  ||||||||||||||| |||| ||||| ||  |||||||||||||||||||  ||| |||||||||||    
T  7947220 aatcaatacaatctcacacggtcttttaaaatcttaaagactttttttaataaaatagtcttttaaaatcctaattcaatacacccc 7947134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 4549452 - 4549364
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttct--atcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| | |||||||||||||| |||||||||| |  || |||||||||||||||||||  |||| ||||||||||    
T  4549452 aatcaatacaatctcacacaatcttttaaaatcttaaagattttttttttattaaaatagtcttttaaaatcctaatcgaatacacccc 4549364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 6901421 - 6901360
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    ||||||||||||||||| | ||||| |  |||||||||||||||||||||||||||| ||||    
T  6901421 tcttttaaaatcttcaaaactttttttgccaaaatagtcttttaaaatctcaatccattaca 6901360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 17519517 - 17519604
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    |||||||| ||||  ||||||||||||||||| |  || |||| || ||  |||||||||||||||||||| ||||||||||| ||||    
T  17519517 aatcaataaaatcttacaaagtcttttaaaatatcaaaaatttcttttactaaaatagtcttttaaaatcttaatccaatacatccct 17519604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 7858125 - 7858185
Alignment:
Q  38 ttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||||||||| |||| |||||| | ||| ||||||||||||||||| ||||||||||||    
T  7858125 ttttaaaatctttaagacttttttttgtcagaatagtcttttaaaatcacaatccaataca 7858185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 45
Target Start/End: Complemental strand, 32827928 - 32827897
Alignment:
Q  14 aaatcaatacaatccaacaaagtcttttaaaa 45  Q
    ||||||||||||||||||||||||||||||||    
T  32827928 aaatcaatacaatccaacaaagtcttttaaaa 32827897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 1151486 - 1151400
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| | |||||||||||||| |||| || || ||| |||||||| |||||||||   |||||| ||||||||    
T  1151486 aatcaatacaatctcacacaatcttttaaaatcttaaagacttattttattaaaatagttttttaaaattctaatccattacacccc 1151400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 37014887 - 37014951
Alignment:
Q  38 ttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||| |||| |||||| ||| |||||| |||||||||||   |||||||||||||||    
T  37014887 ttttaaaatcttaaagacttttttttattaaaataatcttttaaaattctaatccaatacacccc 37014951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 42315880 - 42315968
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42315880 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 42315968  T

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Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 7808996 - 7809084
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  7808996 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaccagtcttttaaaatctcaatccaatacacccc 7809084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 8583089 - 8583008
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaat 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8583089 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaat 8583008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 7820947 - 7821035
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  7820947 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagaatttttctatcaaatcagtcttttaaaatctcaatccaatacacccc 7821035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 3434915 - 3434832
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatac 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  3434915 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctattaaaatagtcttttaaaatctcaattcaatac 3434832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 42217535 - 42217447
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  42217535 aaaatcaatacaatccaacaaagtcttt-aaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcaaatacacccct 42217447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 44930623 - 44930698
Alignment:
Q  29 aacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccctta 104  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  44930623 aacaaagtcttttaaaatctttaagattttttttatcaaaacagtcttttaaaatctcaatccaatacacccctta 44930698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 47686842 - 47686907
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  47686842 tctttcaaaatcttcaagactttttttatcaaaatagtcttttaaaatctcaatccaatacacccc 47686907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 23988205 - 23988292
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    |||||||||||||  ||| | |||||||||||||| |||||||||| ||| |||||||||||||||||||  ||||||||||||||||    
T  23988205 aatcaatacaatctcacatattcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatcctaatccaatacacccct 23988292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 27769072 - 27769158
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  27769072 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 27769158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 32683221 - 32683135
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  32683221 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 32683135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 38234611 - 38234697
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||| | | |||| ||||||||||||||  |||||||||||||||    
T  38234611 aatcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatcctaatccaatacacccc 38234697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 28846239 - 28846170
Alignment:
Q  33 aagtcttttaaaatcttcaa-gattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||| || ||||||||  |||||||||||||||||||||||||||||||||||||||    
T  28846239 aagtcttttaaaatcttaaaagatttttttcatcaaaatagtcttttaaaatctcaatccaatacacccc 28846170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 54510581 - 54510646
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||||||    
T  54510581 tcttttaaaatcttccagactttttttgtcaaaatagtcttttaaaatctcaatccaatacacccc 54510646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 56399038 - 56399126
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    |||||||||| ||| ||||||||||||||||||||||||| |  ||| |||||||||  |||||||||||||||||| ||||||||||||    
T  56399038 aaaatcaataaaattcaacaaagtcttttaaaatcttcaaaaaattt-ctatcaaaacggtcttttaaaatctcaattcaatacacccct 56399126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 48262083 - 48262169
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||   ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  48262083 aatcaatacaatttcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 48262169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 54342155 - 54342241
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| ||||||||||||||||||   |||||||||||||||    
T  54342155 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaattctaatccaatacacccc 54342241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 5442399 - 5442485
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||  |||  ||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  5442399 aaaatcaatacaatctcaca--gtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 5442485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 29649216 - 29649131
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||| |||||    
T  29649216 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaattcaccc 29649131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 5117836 - 5117900
Alignment:
Q  36 tcttttaaaatcttcaaga-ttttttctat-caaaatagtcttttaaaatctcaatccaatacac 98  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||    
T  5117836 tcttttaaaatcttcaagacttttttttattcaaaatagtcttttaaaatctcaatccaatacac 5117900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 32323077 - 32323163
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||  ||| | |||||||||||||| |||| |||||| ||| |||||||||||||||||||  ||||||||||||||    
T  32323077 aatcaatacaatctcacacaatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacaccc 32323163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 50019199 - 50019285
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| ||||||||||||| || |||| ||||| ||| ||||||||||||||||||   |||||||||||||||    
T  50019199 aatcaatacaatctcacacagtcttttaaaattttaaagactttttttattaaaatagtcttttaaaattctaatccaatacacccc 50019285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 49834061 - 49833973
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||||  ||| | |||||||||||||| |||| |||||| ||| |||||||||||||||||||  ||||||||| ||||    
T  49834061 aaaatcaatacaatctcacataatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatataccc 49833973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 25936923 - 25937012
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccctt 103  Q
    ||||||||||||||   |||||||||||||||||||| ||| |||||| || ||||| | || || ||||||||||| |||||||||||||    
T  25936923 aaaatcaatacaattacacaaagtcttttaaaatctttaag-ttttttttaccaaaacaatccttcaaaatctcaattcaatacacccctt 25937012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 49500726 - 49500640
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||   || |||||||||||||||| |||||||| | ||| |||||||||||| |||||   |||||||||||||||    
T  49500726 aatcaatacaatctcgcacagtcttttaaaatcttaaagattttatttattaaaatagtctttcaaaattctaatccaatacacccc 49500640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 388654 - 388617
Alignment:
Q  64 tcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||    
T  388654 tcaaaatagtcttttaaaatctcaatccaatacacccc 388617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 41726114 - 41726198
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||||||||||  | | | |||||||||||||| ||||  |||| ||| |||||||||||||||||||  |||||||||||||    
T  41726114 aatcaatacaatctcaaacaatcttttaaaatcttaaagacattttttattaaaatagtcttttaaaatcataatccaatacacc 41726198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 52110258 - 52110345
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||  ||||| |||||||||||||| |||||||||| |  ||||| | || || ||||||||||| |||||||||||    
T  52110258 aaaatcaatacaatcgcacaaaatcttttaaaatctttaagatttttt-tgccaaaacaatcgttcaaaatctcaattcaatacacccc 52110345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 53272845 - 53272933
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||| ||||  ||||||||||||||||||| ||  ||||| | |  ||||||| ||| |||||||| ||||||||||||||||    
T  53272845 aaaatcaatagaatcacacaaagtcttttaaaatctgcagaattttgttttccaaaataatctcttaaaatcccaatccaatacacccc 53272933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 5104965 - 5105036
Alignment:
Q  31 caaagtcttttaaaatcttcaagattttttctat-caaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||  ||||| ||||| ||| |||||| |||||||||||||  |||||||||||||||    
T  5104965 caaagtcttttaaaatccacaagactttttttatacaaaattgtcttttaaaatcctaatccaatacacccc 5105036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 48532007 - 48531920
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    |||||||||||||  ||| | |||||||||||||| |||| || || ||| |||||||||||||||||||  |||| |||||| ||||    
T  48532007 aatcaatacaatcttacagaatcttttaaaatcttaaagacttattttattaaaatagtcttttaaaatcctaatcaaatacaaccct 48531920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 37827622 - 37827533
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-----ttttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||||||||||  ||| |||||||||||||||| ||||     |||||| ||| ||||||||||||||||||   |||||||||||||    
T  37827622 aatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttttttattaaaatagtcttttaaaattctaatccaatacacc 37827533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 16654196 - 16654267
Alignment:
Q  30 acaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||| |||||||||||||||| |||||| | |   |||||||| | |||||||||||||| ||||||||||    
T  16654196 acaaaatcttttaaaatcttcaggattttgttttcaaaaatagtttattaaaatctcaatctaatacacccc 16654267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 42721972 - 42722042
Alignment:
Q  31 caaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||| | |||| |||||  || ||||  ||| |||||||||| |||||||||||||||    
T  42721972 caaagtcttttaaaatccttaagactttttaaataaaaaatgtcctttaaaatcttaatccaatacacccc 42722042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 30966250 - 30966185
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||| ||||  |||| ||| |||||| ||||||||||||  ||||||||| |||||    
T  30966250 tcttttaaaatcttaaagacattttttattaaaataatcttttaaaatcataatccaatatacccc 30966185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 3437128 - 3437204
Alignment:
Q  24 aatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||| ||||||||||||||||| |||||| ||||||  |  ||||| |||||||||||||  ||| |||||||||    
T  3437128 aatccagcaaagtcttttaaaatcctcaagacttttttaaacaaaaattgtcttttaaaatcctaattcaatacacc 3437204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 25446678 - 25446750
Alignment:
Q  31 caaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    ||||||||||||||||| |||||| ||||||  |  ||||| ||| |||||||||  ||||||||||||||||    
T  25446678 caaagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacacccct 25446750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 26340586 - 26340654
Alignment:
Q  31 caaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    ||||||||||||||||| | |||| |||||  || ||||| ||| |||||||||  |||||||||||||    
T  26340586 caaagtcttttaaaatccttaagactttttaaataaaaattgtcctttaaaatcctaatccaatacacc 26340654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 31314495 - 31314423
Alignment:
Q  30 acaaagtcttttaaaatcttcaagattttttctatcaaaa-tagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||| |||| | |||||  | ||||| | ||| |||||||||| |||||||||||||||    
T  31314495 acaaagtcttttaaaatcctcaatacttttttaaacaaaaattgtcctttaaaatcttaatccaatacacccc 31314423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 36478890 - 36478854
Alignment:
Q  24 aatccaacaaagtcttttaaaatcttcaagatttttt 60  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  36478890 aatcctacaaagtcttttaaaatcttcaagacttttt 36478854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 101
Target Start/End: Complemental strand, 44929904 - 44929876
Alignment:
Q  73 tcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||    
T  44929904 tcttttaaaatctcaatccaatacacccc 44929876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 29941887 - 29941975
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29941887 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 29941975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 45547913 - 45548001
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45547913 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 45548001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 7487045 - 7486957
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  7487045 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacggtcttttaaaatctcaatccaatacacccc 7486957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 6288644 - 6288553
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccctta 104  Q
    ||||||||||||||||||||||||||||||||||||| || |   |||||||||||| |||||||||||||||||||||||| |||||||||    
T  6288644 aaaatcaatacaatccaacaaagtcttttaaaatctttaaaaaaatttctatcaaaacagtcttttaaaatctcaatccaatccacccctta 6288553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 35171473 - 35171381
Alignment:
Q  13 aaaatcaatacaatccaacaaa----gtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||| ||    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  35171473 aaaatcaatacaatccaacgaacgaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaacacacccc 35171381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 25289163 - 25289249
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||||||||| ||| |||||||||||||||||||  |||||||||||||||    
T  25289163 aatcaatacaatctcacacagtcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatcctaatccaatacacccc 25289249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 24192728 - 24192663
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  24192728 tcttttaaaatcttcaaaactttttttatcaaaatagtcttttaaaatctcaatccaatacacccc 24192663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 36599233 - 36599148
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacac 98  Q
    |||||||||| |||| |  ||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||| ||||||||||    
T  36599233 aaaatcaatataatcgattaaagtcttttaaaatcttcaagattttttctattaaaatagtcctttaaaatttcattccaatacac 36599148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 18178280 - 18178366
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  18178280 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 18178366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 26789793 - 26789879
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  26789793 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 26789879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 11535695 - 11535760
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||    
T  11535695 tcttttaaaatcttcaagactttttttgtcaaaatagtcttttaaaatctcaattcaatacacccc 11535760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 28845586 - 28845675
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccctta 104  Q
    |||||||||||||  ||| ||||||| |||||||| |||| ||||| ||| |||||||||||||||||||  ||||||||||||||||||    
T  28845586 aatcaatacaatctcacatagtctttaaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccctta 28845675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 24935356 - 24935292
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||    
T  24935356 tcttttaaaatcttcatgactttttttaccaaaatagtcttttaaaatctcaatccaatacaccc 24935292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 25684049 - 25683985
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||    
T  25684049 tcttttaaaatcttcatgactttttttaccaaaatagtcttttaaaatctcaatccaatacaccc 25683985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 2289282 - 2289370
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||  |||||||||||||||||||| |||||| ||| |   |||| | |||||||||||| ||||||||||||||||    
T  2289282 aaaatcaatacaatcacacaaagtcttttaaaatctttaagattcttttttctaaaacaatcttttaaaatcccaatccaatacacccc 2289370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 12135555 - 12135619
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||||| |||||||| |  ||||||||||||| ||||||||||||||||||||||    
T  12135555 tcttttaaaatcttcatgattttttttgccaaaatagtctttcaaaatctcaatccaatacaccc 12135619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 36597733 - 36597649
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||||||||||| || |||| ||||||||||||||||| |    |||||||||||||||| |||||||||||| |||||||||    
T  36597733 aaaatcaatacaattcatcaaaatcttttaaaatcttcaaaaaaaattctatcaaaatagtcctttaaaatctcattccaataca 36597649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 43079491 - 43079576
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||||||||||  ||| |||||||||||||||| |||| |||||| ||| ||||||||||||||||||   |||||||||||||    
T  43079491 aatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaattctaatccaatacacc 43079576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 3464593 - 3464681
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||| ||||  ||| |||||||||||||||| |||| |||||  || ||||||||||| |||||||  |||||||||||||||    
T  3464593 aaaatcaatagaatctgacacagtcttttaaaatcttaaagacttttttaattaaaatagtcttgtaaaatcctaatccaatacacccc 3464681  T

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Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 7027913 - 7027993
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaata 95  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||||||  |||||||||    
T  7027913 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaataatcttttaaaatcctaatccaata 7027993  T

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Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 27979895 - 27979979
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    ||||| |||||||||  |||||||||||||||||||| |||||| ||| |  ||||| | ||||| |||||||||||||||||||    
T  27979895 aaaattaatacaatcacacaaagtcttttaaaatctttaagattatttttgacaaaacaatctttcaaaatctcaatccaataca 27979979  T

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Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 28066425 - 28066509
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    ||||| |||||||||  |||||||||||||||||||| |||||| ||| |  ||||| | ||||| |||||||||||||||||||    
T  28066425 aaaattaatacaatcacacaaagtcttttaaaatctttaagattatttttgacaaaacaatctttcaaaatctcaatccaataca 28066509  T

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Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 30046606 - 30046669
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||||||||||||| || ||||| || ||||||||||||| ||||| |||||||||||||||    
T  30046606 tcttttaaaatcttcatgactttttttaccaaaatagtctttcaaaatttcaatccaatacacc 30046669  T

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Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 30137650 - 30137713
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||||||||||||| || ||||| || ||||||||||||| ||||| |||||||||||||||    
T  30137650 tcttttaaaatcttcatgactttttttaccaaaatagtctttcaaaatttcaatccaatacacc 30137713  T

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Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 33136602 - 33136691
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga---ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| ||||   |||||| ||| ||||| |||||||||||||  |||||||||||||||    
T  33136602 aatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttttattaaaattgtcttttaaaatcctaatccaatacacccc 33136691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 13832755 - 13832685
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatc 84  Q
    |||||||||||||  ||| |||||||||||||||| |||| |||||| ||| |||||||||||||||||||    
T  13832755 aatcaatacaatctcacacagtcttttaaaatcttaaagatttttttttattaaaatagtcttttaaaatc 13832685  T

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Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 10658436 - 10658524
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaa-gattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||  | | |||||||||||||||| || || ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  10658436 aaaatcaatacaatctcatacagtcttttaaaatcttaaaagacttttt-tattaaaatagtcttttaaaatcctaatccaatacacccc 10658524  T

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Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 38821339 - 38821254
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacac 98  Q
    |||||||||| ||||  ||||| ||||||||||||||||  ||||| | |  ||||||| ||||||||||||||||| ||||||||    
T  38821339 aaaatcaatataatctcacaaaatcttttaaaatcttcagaattttgtttgccaaaataatcttttaaaatctcaattcaatacac 38821254  T

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Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 214693 - 214625
Alignment:
Q  34 agtcttttaaaatcttcaa-gattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||| || || ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  214693 agtcttttaaaatcttaaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 214625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 34027861 - 34027781
Alignment:
Q  17 tcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||| ||||  ||||| || |||||||||||||||||||| | |  ||||||| | |||||||||||||||||||||||    
T  34027861 tcaatataatctcacaaaatcctttaaaatcttcaagattttgtttgccaaaataatattttaaaatctcaatccaataca 34027781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 35906968 - 35907036
Alignment:
Q  17 tcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatct 85  Q
    |||||| |||||  ||||||| ||||||||||| |||| |||||  |||||||||||||||||||||||    
T  35906968 tcaatataatcctgcaaagtcatttaaaatcttaaagacttttttcatcaaaatagtcttttaaaatct 35907036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 379935 - 380004
Alignment:
Q  34 agtcttttaaaatcttcaa-ga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||| || || |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  379935 agtcttttaaaatcttaaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacacccc 380004  T

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Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 15283687 - 15283598
Alignment:
Q  13 aaaatcaatacaatccaac-aaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||  || ||||| |||||||||||| |||||| ||| |   |||| | |||||||||||| ||||||||||||||||    
T  15283687 aaaatcaatacaatcacactaaagttttttaaaatctttaagattcttttttctaaaacaatcttttaaaatcccaatccaatacacccc 15283598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 43023524 - 43023600
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaat 89  Q
    |||||||||||||||  | ||||| |||||||||||| |||||| ||| |   |||| |||||||||||||||||||    
T  43023524 aaaatcaatacaatcacataaagttttttaaaatctttaagattcttttttctaaaacagtcttttaaaatctcaat 43023600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 14919844 - 14919805
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaa 52  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  14919844 aaaatcaatacaatccaacaaaatcttttaaaattttcaa 14919805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 22551445 - 22551374
Alignment:
Q  31 caaagtcttttaaaatcttcaagattttttctatcaaaa-tagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||| |||||| |||||  | ||||| | ||| |||||||||| |||||||||||||||    
T  22551445 caaagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaatccaatacacccc 22551374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 38534608 - 38534541
Alignment:
Q  36 tcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    |||||||||||||| |||| |||||| | | |||||||||||||||||||| |||| |||||| ||||    
T  38534608 tcttttaaaatctttaagacttttttttgtaaaaatagtcttttaaaatcttaatctaatacatccct 38534541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 20156410 - 20156344
Alignment:
Q  36 tcttttaaaatcttcaagattttttc-tatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||| | ||| |||||| ||  |||||||||||||||||||  |||||||||||||||    
T  20156410 tcttttaaaatctactagactttttcatacaaaaatagtcttttaaaatcctaatccaatacacccc 20156344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 18175612 - 18175538
Alignment:
Q  29 aacaaagtcttttaaaatc----ttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||||||||||||||||    || |||||||||| |  ||||| | ||||| |||||||||||||||||||||    
T  18175612 aacaaagtcttttaaaatcaatctttaagattttttttgccaaaacaatctttcaaaatctcaatccaatacacc 18175538  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 43848205 - 43848274
Alignment:
Q  32 aaagtcttttaaaatcttcaagattttttctatcaaaa-tagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||||||||  ||||||||||||  | ||||| | |||||||||||||  ||||||||||||||    
T  43848205 aaagtcttttaaaattctcaagatttttttaaacaaaaattgtcttttaaaatcataatccaatacaccc 43848274  T

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Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 45319473 - 45319561
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45319473 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 45319561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 52706386 - 52706474
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  52706386 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacattcttttaaaatctcaatccaatacacccc 52706474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 26881904 - 26881820
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26881904 aaaatcaatacaatccaacaaagtcttctaaaatctttaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 26881820  T

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Target: chr1; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 45535755 - 45535840
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacac 98  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45535755 aaaatcaatacaatccaacaaaatcttctaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacac 45535840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 14389420 - 14389508
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||||||||||||||||||||||||||| |   |||||||||||| |||||||||||||||||||||||||||||||    
T  14389420 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaaaaaatttctatcaaaacagtcttttaaaatctcaatccaatacacccc 14389508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 39758881 - 39758950
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaa 82  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  39758881 aaaatcaatacaatccaacaaagtcttttaaaatctgcaagattttttctatcaaaatagttttttaaaa 39758950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 39764235 - 39764304
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaa 82  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  39764235 aaaatcaatacaatccaacaaagtcttttaaaatctgcaagattttttctatcaaaatagttttttaaaa 39764304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 36403105 - 36403170
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||    
T  36403105 tcttttaaaatcttcaagactttttttgtcaaaatagtcttttaaaatctcaatccaatacacccc 36403170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 6313584 - 6313670
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  6313584 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 6313670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 10897662 - 10897728
Alignment:
Q  36 tcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||    
T  10897662 tcttttaaaatcttcaagacttttttttctcaaaatagtcttttaaaatctcaatccaatacacccc 10897728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 25613100 - 25613186
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  25613100 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 25613186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 29395624 - 29395538
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  29395624 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 29395538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 48198955 - 48199041
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||| | | |||| ||||||||||||||  |||||||||||||||    
T  48198955 aatcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatcctaatccaatacacccc 48199041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 48207538 - 48207624
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||| | | |||| ||||||||||||||  |||||||||||||||    
T  48207538 aatcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatcctaatccaatacacccc 48207624  T

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Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 9321706 - 9321619
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| |||||| ||| ||||||||||||||||||| |||| |||||||||||    
T  9321706 aatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcccaattcaatacacccc 9321619  T

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Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 49231992 - 49232079
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccct 102  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| ||||| |||||||||||||  ||||||||||||||||    
T  49231992 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcctaatccaatacacccct 49232079  T

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Target: chr1; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 20111768 - 20111682
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||| |||||||  |||||||||||||||||||| |||| ||||| ||| |||||||||||||||||||  |||| ||||||||||    
T  20111768 aatcagtacaatctcacaaagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcgtaatcaaatacacccc 20111682  T

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Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 51702602 - 51702688
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||  ||||| |||||||||    
T  51702602 aatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcctatacacccc 51702688  T

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Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 28386647 - 28386558
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||| ||||  ||| |||||||||||||||| |||| |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  28386647 aaaatcaatagaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacacccc 28386558  T

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Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 1923453 - 1923373
Alignment:
Q  17 tcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||| ||||  ||||| ||||||||||||||||||||||| | |  ||||||| |||||||||||||||||||||||||    
T  1923453 tcaatataatctcacaaaatcttttaaaatcttcaagattttgtttgccaaaataatcttttaaaatctcaatccaataca 1923373  T

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Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 51826049 - 51825965
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||| |  ||||| | ||||| ||| |||||||||||||||    
T  51826049 aaaatcaatacaatcacacaaagtcttttaaaatctttaagattttttttgccaaaacaatctttcaaactctcaatccaataca 51825965  T

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Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 8140063 - 8139980
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacac 98  Q
    |||||||||||||  ||| | |||||||||||||| ||||| |||| ||| |||||||||||||||||| | ||||||||||||    
T  8140063 aatcaatacaatctcacacaatcttttaaaatcttaaagatattttatattaaaatagtcttttaaaattttaatccaatacac 8139980  T

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Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 33242524 - 33242461
Alignment:
Q  39 tttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||| |||||| | |||||||||||||||||||||||||| |||||||||||    
T  33242524 tttaaaatcttcaagacttttttttgtcaaaatagtcttttaaaatctcaatgcaatacacccc 33242461  T

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Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 9174908 - 9174969
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    ||||||||||||||||||| ||||| | | ||||||||||||||||||||||||| ||||||    
T  9174908 tcttttaaaatcttcaagactttttttgttaaaatagtcttttaaaatctcaatcaaataca 9174969  T

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Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 9832738 - 9832802
Alignment:
Q  36 tcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||||||||||| ||||| | ||||| ||||||||||||||||||||| ||||||||||    
T  9832738 tcttttaaaatcttcaagactttttttgtcaaa-tagtcttttaaaatctcaatctaatacacccc 9832802  T

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Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 19894822 - 19894913
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccctta 104  Q
    |||||||||| ||||  ||||| |||||||||||||| |||||| ||| |  |||||||| ||||||||||| |||||||| | ||||||||    
T  19894822 aaaatcaatataatcacacaaaatcttttaaaatctttaagattctttttgccaaaatagacttttaaaatcccaatccaacaaacccctta 19894913  T

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Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 38535343 - 38535261
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    ||||||||||||| |||| || ||||||||||||| || | ||||| ||| |||||| ||||||||||||  |||||||||||    
T  38535343 aatcaatacaatctaacacagacttttaaaatcttaaatactttttttattaaaataatcttttaaaatcctaatccaataca 38535261  T

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Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 38557561 - 38557479
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    ||||||||||||| |||| || ||||||||||||| || | ||||| ||| |||||| ||||||||||||  |||||||||||    
T  38557561 aatcaatacaatctaacacagacttttaaaatcttaaatactttttttattaaaataatcttttaaaatcctaatccaataca 38557479  T

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Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 48176716 - 48176644
Alignment:
Q  32 aaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccctt 103  Q
    ||||||||||| || ||| |||| |||||| ||| |||||||||||||||||||  |||||||||||||||||    
T  48176716 aaagtcttttacaaacttaaagaattttttttattaaaatagtcttttaaaatcctaatccaatacacccctt 48176644  T

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Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 45273567 - 45273653
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    |||||||||| ||||  | | |||||||||||||||| || | ||||| ||| |||||| ||||||||||||  |||||||||||||    
T  45273567 aaaatcaatataatctcatatagtcttttaaaatcttaaaaactttttttattaaaataatcttttaaaatcctaatccaatacacc 45273653  T

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Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 29220120 - 29220191
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga---ttttttctatcaaaatagtcttttaaaat 83  Q
    |||||||||||||  ||| |||||||||||||||| ||||   |||||| ||| ||||||||||||||||||    
T  29220120 aatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttttattaaaatagtcttttaaaat 29220191  T

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Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 23326878 - 23326941
Alignment:
Q  21 tacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatc 84  Q
    |||||||  |||||||||||||||||||| | ||| |||| ||| |||||||| ||||||||||    
T  23326878 tacaatctcacaaagtcttttaaaatcttaatgatattttttattaaaatagttttttaaaatc 23326941  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 5494344 - 5494258
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| || | || || ||| |||||| |||||||||||   ||| |||||||||||    
T  5494344 aatcaatacaatctcacagagtcttttaaaatcttaaatacttcttttattaaaataatcttttaaaattctaattcaatacacccc 5494258  T

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Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 25830426 - 25830360
Alignment:
Q  36 tcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    ||||||||||| || |||| |||||| ||| |||||||||||||||||||  ||| |||||||||||    
T  25830426 tcttttaaaattttaaagacttttttttattaaaatagtcttttaaaatcctaattcaatacacccc 25830360  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 4289907 - 4289976
Alignment:
Q  30 acaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    ||||||||||||||||| | || |||||| | |  ||||||| ||| |||||||| ||||||||||||||    
T  4289907 acaaagtcttttaaaatatacaggattttgttttccaaaataatctcttaaaatcccaatccaatacacc 4289976  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 43556707 - 43556772
Alignment:
Q  33 aagtcttttaaaatcttca-agattttttctatcaaaatagtcttttaaaatctcaatccaataca 97  Q
    ||||||||||||||||||  ||||||| | |  ||||||||||||| | |||||||||||||||||    
T  43556707 aagtcttttaaaatcttctgagattttatttgccaaaatagtctttcacaatctcaatccaataca 43556772  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 46601480 - 46601419
Alignment:
Q  24 aatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatc 84  Q
    ||||| ||||||||||| ||||||||||||| ||||||  || ||||| |||||||||||||    
T  46601480 aatcctacaaagtctttcaaaatcttcaagacttttttaaataaaaattgtcttttaaaatc 46601419  T

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Target: scaffold0940 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 3660 - 3574
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| ||||| |||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  3660 aatcaatacaatctcacacagtctcttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 3574  T

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Target: scaffold0472 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 1026 - 938
Alignment:
Q  13 aaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||  ||||| |||||||||||||| |||||||||| |  ||||| | ||||  |||||||||||||||||||||||    
T  1026 aaaatcaatacaatcacacaaaatcttttaaaatctttaagattttttttgccaaaacaatcttgcaaaatctcaatccaatacacccc 938  T

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Target: scaffold0839 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 3196 - 3114
Alignment:
Q  19 aatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||||  ||| |||||||||||||||| |||| |||||| ||| |||||||||||||||||||| |||| |||||||||    
T  3196 aatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcttaatctaatacaccc 3114  T

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Target: scaffold0054 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 36487 - 36401
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaaga-ttttttctatcaaaatagtcttttaaaatctcaatccaatacaccc 100  Q
    |||||||| ||||  ||| |||||||||||||||| |||| |||||| ||| |||||||||||||||||||  ||||||||||||||    
T  36487 aatcaatataatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacaccc 36401  T

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Target: scaffold0042 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 57256 - 57170
Alignment:
Q  15 aatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||  ||| |||||||||||||||| | || ||||| ||| ||||||||||||||||||   |||||||||||||||    
T  57256 aatcaatacaatctcacacagtcttttaaaatcttaaggactttttttattaaaatagtcttttaaaattctaatccaatacacccc 57170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 21800 - 21865
Alignment:
Q  34 agtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacc 99  Q
    ||||||||||||| || |||| ||||| ||| |||||| ||||||||||||| |||||||||||||    
T  21800 agtcttttaaaatgttaaagactttttgtattaaaataatcttttaaaatcttaatccaatacacc 21865  T

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Target: scaffold0110 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 38815 - 38750
Alignment:
Q  34 agtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 101  Q
    |||||||||||||||| || | ||||| ||| ||  |||||||||||||||  |||||||||||||||    
T  38815 agtcttttaaaatcttaaaaactttttttattaa--tagtcttttaaaatcctaatccaatacacccc 38750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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