View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2604_low_39 (Length: 294)
Name: NF2604_low_39
Description: NF2604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2604_low_39 |
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Alignment Details
Target: chr2 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 15823239 - 15823520
Alignment:
| Q |
1 |
cacagtagtatacgtaatagcattcggcataactcctttacttgccattgtatcaatgacagcagccccttcatcatgaaacccggctctcacatacgct |
100 |
Q |
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| T |
15823239 |
cacagtagtatacgtaatagcattcggcataactcctttacttgccattgtatcaatgacagcagccccttcatcatgaaacccggctcttacatacgct |
15823338 |
T |
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| Q |
101 |
gccacaagctcattgtaagtaatagcatccggctcacaattattatcctccatttcttttaagatgttcaatgcctctgtgtaaactccagccttcccaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15823339 |
gccacaagctcattgtaagtaatagcatccggctcacaattattatcctccatttcttttaagatgttcaatgcctctgtgtaaactccagccttcccaa |
15823438 |
T |
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| Q |
201 |
aaacctgcaacatcgagttatatgtagccgttcccggtttatatccattcaatctcacatcatcaaaaaacctacttgcttc |
282 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| |
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| T |
15823439 |
aaacctgcaacatcgagttatatgtagccgttcccggtttatatccattcaatttcaaatcatcaaaaaacctccttgcttc |
15823520 |
T |
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