View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2604_low_9 (Length: 478)
Name: NF2604_low_9
Description: NF2604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2604_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 442; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 14 - 467
Target Start/End: Complemental strand, 55025294 - 55024841
Alignment:
| Q |
14 |
aggacaacaggatgttttgcattatacaaatccactgcatcaacaaaagcatgatattaagaaacgatgattgaacattattccttgatcaaagtctaat |
113 |
Q |
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| T |
55025294 |
aggactacatgatgttttgcattatacaaatccactgcatcaacaaaagcatgatattaagaaacgatgattgaacattattccttgatcaaagtctaat |
55025195 |
T |
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| Q |
114 |
ctacaactgagtagaatgatatcagaatggggtttaacttcgctcgatgagaaaatgtacttttctggttctctgaggctctttagaggaaatttagctt |
213 |
Q |
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| T |
55025194 |
ctacaactgagtagaatgatatcagaatggggtttaacttcgctcgatgagaaaatgtacttttctggttctctgaggctctttagaggaaatttagctt |
55025095 |
T |
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| Q |
214 |
gaagagggtaaacagaaaaggttaaaacgggtattttgtacacaaattctctcatatattaacaaaaagaaaacattttttcttcaaagtacagaaccat |
313 |
Q |
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| T |
55025094 |
gaagagggtaaacagaaaaggttaaaacgggtattttgtacacaaattctctcatatattaacaaaaagaaaacattttttcttcaaagtacagaaccat |
55024995 |
T |
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| Q |
314 |
ttctactctaaaatctcgaatgaagttgacaatacaatgaggttcttttattaattttatatttgtgattttcaatttaacaaatataaactaaagaacc |
413 |
Q |
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| T |
55024994 |
ttctactctaaaatctcgaatgaagttgacaatacaacgaggttcttttattaattttatatttgtgattttcaatttaacaaatataaactaaagaacc |
55024895 |
T |
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| Q |
414 |
taccaaaatgatgagcatctattgatggaacggacaatgtcctaatgtttgatg |
467 |
Q |
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| T |
55024894 |
taccaaaatgatgagcatctattgatggaacggacaatgtcctaatgtttgatg |
55024841 |
T |
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