View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2605_high_53 (Length: 236)
Name: NF2605_high_53
Description: NF2605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2605_high_53 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 14 - 236
Target Start/End: Complemental strand, 33351016 - 33350795
Alignment:
| Q |
14 |
agattatcattattttcgacaggcatgctctcggattagcatcctctcctttattttctctcatgttatccattctgccttaatctcgatacattttcta |
113 |
Q |
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| T |
33351016 |
agattatcattattttcgacaggcatgctctcggatttgcatcctctcctgttttttctctcatgttatccattctgccttaatctc-ataaattttcta |
33350918 |
T |
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| Q |
114 |
aattaatgttccttaactatatgtgacagataatatcgcagtacatttactatagatactttcgcagcagtgaatcatgtgatgatggagaatacttgaa |
213 |
Q |
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| T |
33350917 |
aattaatgttccttaactatatgtgacagataatatcgcagtacatttactatagatactttcgcagcagtgaatcaagtgatgatggagaatacttgaa |
33350818 |
T |
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| Q |
214 |
gtagaagcaagtcgatcaatctt |
236 |
Q |
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|||||||||||| |||||||||| |
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| T |
33350817 |
gtagaagcaagttgatcaatctt |
33350795 |
T |
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