View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2605_low_3 (Length: 717)

Name: NF2605_low_3
Description: NF2605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2605_low_3
NF2605_low_3
[»] chr3 (35 HSPs)
chr3 (8-585)||(48643030-48643607)
chr3 (605-664)||(3017527-3017586)
chr3 (605-664)||(34682278-34682337)
chr3 (604-664)||(51754252-51754312)
chr3 (605-664)||(40036999-40037058)
chr3 (602-664)||(29352400-29352462)
chr3 (606-663)||(47358150-47358207)
chr3 (605-664)||(21441293-21441352)
chr3 (604-663)||(35565040-35565099)
chr3 (606-664)||(16222832-16222890)
chr3 (606-664)||(23461186-23461244)
chr3 (606-660)||(44638623-44638677)
chr3 (607-664)||(51761123-51761180)
chr3 (607-664)||(54803359-54803416)
chr3 (605-664)||(51436997-51437056)
chr3 (609-664)||(52836632-52836687)
chr3 (606-664)||(27957460-27957518)
chr3 (606-648)||(31705470-31705512)
chr3 (606-664)||(44398231-44398289)
chr3 (606-664)||(47982363-47982421)
chr3 (606-664)||(47991650-47991708)
chr3 (606-664)||(48000937-48000995)
chr3 (606-664)||(48010224-48010282)
chr3 (607-648)||(11692529-11692570)
chr3 (607-664)||(19988223-19988280)
chr3 (604-664)||(38443315-38443375)
chr3 (605-664)||(54089839-54089898)
chr3 (602-664)||(26050493-26050555)
chr3 (606-664)||(26920934-26920992)
chr3 (606-660)||(33092336-33092389)
chr3 (606-648)||(55328809-55328851)
chr3 (606-664)||(16732273-16732331)
chr3 (606-636)||(40791159-40791189)
chr3 (619-664)||(19988192-19988237)
chr3 (603-664)||(54090164-54090225)
[»] chr5 (32 HSPs)
chr5 (606-664)||(27858662-27858720)
chr5 (606-664)||(9176958-9177016)
chr5 (603-664)||(26408634-26408695)
chr5 (608-664)||(18705525-18705581)
chr5 (604-664)||(20166421-20166481)
chr5 (604-664)||(23592478-23592538)
chr5 (605-664)||(27858387-27858446)
chr5 (605-664)||(39412474-39412533)
chr5 (604-664)||(973824-973884)
chr5 (604-664)||(4716816-4716876)
chr5 (605-664)||(2268226-2268285)
chr5 (605-664)||(5907259-5907318)
chr5 (602-664)||(3023394-3023455)
chr5 (606-664)||(8343384-8343442)
chr5 (606-664)||(15442974-15443032)
chr5 (606-664)||(25945329-25945387)
chr5 (607-664)||(11062673-11062730)
chr5 (607-664)||(16969040-16969097)
chr5 (604-664)||(23592807-23592867)
chr5 (605-664)||(13198239-13198298)
chr5 (605-648)||(23910294-23910337)
chr5 (606-664)||(5214592-5214650)
chr5 (606-664)||(22619447-22619505)
chr5 (604-664)||(13197907-13197967)
chr5 (605-664)||(17964648-17964707)
chr5 (605-664)||(18673909-18673968)
chr5 (605-664)||(32792362-32792421)
chr5 (602-660)||(974185-974243)
chr5 (605-647)||(21747674-21747716)
chr5 (604-660)||(2268613-2268669)
chr5 (605-664)||(8144672-8144731)
chr5 (606-664)||(18036577-18036635)
[»] chr8 (24 HSPs)
chr8 (604-664)||(26695761-26695821)
chr8 (604-664)||(10837164-10837224)
chr8 (604-664)||(30794805-30794865)
chr8 (604-664)||(41441412-41441472)
chr8 (605-664)||(34181487-34181546)
chr8 (606-664)||(7050880-7050938)
chr8 (606-664)||(27696696-27696754)
chr8 (605-699)||(32923723-32923818)
chr8 (604-664)||(2232730-2232790)
chr8 (605-664)||(2705494-2705553)
chr8 (605-664)||(17696609-17696668)
chr8 (605-664)||(42216611-42216670)
chr8 (606-664)||(9855307-9855365)
chr8 (605-662)||(4528973-4529030)
chr8 (609-664)||(2056723-2056778)
chr8 (603-664)||(37406227-37406288)
chr8 (604-664)||(7230325-7230385)
chr8 (604-664)||(7678596-7678656)
chr8 (608-664)||(42686346-42686402)
chr8 (605-664)||(10495721-10495780)
chr8 (606-648)||(43857463-43857505)
chr8 (604-664)||(44204497-44204557)
chr8 (605-660)||(2705162-2705217)
chr8 (605-660)||(27697026-27697081)
[»] scaffold0015 (1 HSPs)
scaffold0015 (605-663)||(49716-49774)
[»] chr7 (30 HSPs)
chr7 (602-664)||(38816233-38816295)
chr7 (604-664)||(31849752-31849812)
chr7 (606-664)||(10336473-10336531)
chr7 (602-664)||(39102795-39102857)
chr7 (603-664)||(19276636-19276697)
chr7 (604-648)||(18732996-18733040)
chr7 (605-664)||(6607635-6607694)
chr7 (605-664)||(6626522-6626581)
chr7 (605-664)||(21438596-21438655)
chr7 (605-664)||(39384711-39384770)
chr7 (605-664)||(48863500-48863559)
chr7 (606-664)||(2765061-2765119)
chr7 (610-664)||(24000277-24000331)
chr7 (606-664)||(24164339-24164397)
chr7 (602-664)||(26174947-26175009)
chr7 (606-664)||(41320367-41320425)
chr7 (607-664)||(21766865-21766922)
chr7 (608-664)||(38567823-38567879)
chr7 (608-664)||(47913476-47913532)
chr7 (605-664)||(1795439-1795498)
chr7 (605-664)||(31657743-31657802)
chr7 (605-664)||(47403847-47403906)
chr7 (606-664)||(35193318-35193376)
chr7 (595-664)||(5850829-5850898)
chr7 (602-663)||(17356599-17356660)
chr7 (604-648)||(8952415-8952459)
chr7 (608-648)||(11638352-11638392)
chr7 (605-664)||(21276334-21276393)
chr7 (602-664)||(36508060-36508122)
chr7 (608-660)||(47913121-47913173)
[»] chr6 (26 HSPs)
chr6 (606-664)||(17203865-17203923)
chr6 (606-664)||(33243169-33243227)
chr6 (604-664)||(33360445-33360505)
chr6 (605-664)||(6389911-6389970)
chr6 (604-699)||(14631049-14631145)
chr6 (606-664)||(9565996-9566054)
chr6 (605-660)||(3199306-3199361)
chr6 (608-663)||(6535736-6535791)
chr6 (605-664)||(10143210-10143269)
chr6 (605-664)||(21003127-21003186)
chr6 (605-664)||(33706156-33706215)
chr6 (606-664)||(1827056-1827114)
chr6 (606-664)||(2793034-2793092)
chr6 (606-664)||(21905414-21905472)
chr6 (606-664)||(22695555-22695613)
chr6 (604-661)||(5997191-5997248)
chr6 (603-664)||(12395660-12395721)
chr6 (604-664)||(605475-605535)
chr6 (606-649)||(16120581-16120624)
chr6 (611-664)||(32219201-32219254)
chr6 (604-664)||(2182264-2182324)
chr6 (606-664)||(16120401-16120459)
chr6 (606-664)||(16409096-16409154)
chr6 (603-664)||(3371332-3371393)
chr6 (604-664)||(584019-584079)
chr6 (606-660)||(21904865-21904919)
[»] chr2 (34 HSPs)
chr2 (606-664)||(34826039-34826097)
chr2 (603-664)||(9776968-9777029)
chr2 (604-664)||(430874-430934)
chr2 (604-664)||(32654171-32654231)
chr2 (604-664)||(40691639-40691699)
chr2 (605-664)||(2098620-2098679)
chr2 (605-664)||(4902953-4903012)
chr2 (606-664)||(32504336-32504394)
chr2 (606-664)||(42814311-42814369)
chr2 (608-664)||(18707495-18707551)
chr2 (604-664)||(45002843-45002903)
chr2 (605-664)||(3963052-3963111)
chr2 (605-664)||(4902622-4902681)
chr2 (605-664)||(4950020-4950079)
chr2 (604-663)||(14827852-14827911)
chr2 (605-664)||(16265584-16265643)
chr2 (606-664)||(4831473-4831531)
chr2 (606-664)||(8031374-8031432)
chr2 (606-664)||(32927710-32927768)
chr2 (602-664)||(41186601-41186663)
chr2 (606-663)||(9791550-9791607)
chr2 (608-664)||(18478648-18478704)
chr2 (604-664)||(18907279-18907339)
chr2 (604-664)||(39060726-39060786)
chr2 (605-664)||(33850452-33850511)
chr2 (606-664)||(970437-970495)
chr2 (606-664)||(11108407-11108465)
chr2 (604-648)||(5673993-5674037)
chr2 (606-645)||(19591442-19591481)
chr2 (608-663)||(28625823-28625878)
chr2 (609-664)||(39060409-39060464)
chr2 (605-648)||(14102945-14102988)
chr2 (605-660)||(14827497-14827552)
chr2 (604-649)||(41186247-41186292)
[»] chr4 (39 HSPs)
chr4 (604-664)||(13198971-13199031)
chr4 (604-664)||(40147349-40147409)
chr4 (605-664)||(322001-322060)
chr4 (605-664)||(15168912-15168971)
chr4 (605-664)||(51892662-51892721)
chr4 (602-664)||(16335052-16335114)
chr4 (606-664)||(23205699-23205757)
chr4 (606-664)||(42496284-42496342)
chr4 (606-664)||(46008977-46009035)
chr4 (606-664)||(52096897-52096955)
chr4 (604-661)||(35378017-35378074)
chr4 (604-664)||(49263872-49263932)
chr4 (605-664)||(8445012-8445071)
chr4 (605-664)||(31317582-31317641)
chr4 (602-664)||(888063-888125)
chr4 (606-664)||(53940699-53940757)
chr4 (606-663)||(45848628-45848685)
chr4 (608-664)||(10616464-10616520)
chr4 (605-661)||(32384094-32384150)
chr4 (608-660)||(43980134-43980186)
chr4 (604-664)||(45311194-45311254)
chr4 (605-664)||(919177-919236)
chr4 (606-661)||(41965497-41965552)
chr4 (605-664)||(42207866-42207924)
chr4 (605-664)||(47690291-47690350)
chr4 (606-664)||(5813772-5813830)
chr4 (606-664)||(32328061-32328119)
chr4 (604-649)||(39210626-39210671)
chr4 (605-649)||(1922832-1922876)
chr4 (603-663)||(40005411-40005473)
chr4 (605-660)||(51716483-51716538)
chr4 (602-660)||(47690650-47690708)
chr4 (604-649)||(29526247-29526292)
chr4 (609-694)||(43561811-43561896)
chr4 (608-648)||(44589028-44589068)
chr4 (605-648)||(1614280-1614323)
chr4 (605-660)||(43562052-43562107)
chr4 (606-664)||(13086609-13086666)
chr4 (604-658)||(52096564-52096618)
[»] chr1 (44 HSPs)
chr1 (603-663)||(44519337-44519397)
chr1 (606-664)||(1342432-1342490)
chr1 (606-664)||(1366628-1366686)
chr1 (606-664)||(39524269-39524327)
chr1 (606-664)||(45950903-45950961)
chr1 (604-664)||(6782916-6782976)
chr1 (604-664)||(28486976-28487036)
chr1 (604-664)||(47647856-47647916)
chr1 (605-664)||(36465935-36465994)
chr1 (605-664)||(38717685-38717744)
chr1 (605-664)||(47671999-47672058)
chr1 (606-664)||(2930961-2931019)
chr1 (606-664)||(5132686-5132744)
chr1 (602-664)||(17077322-17077384)
chr1 (606-664)||(49628127-49628185)
chr1 (603-664)||(25378962-25379023)
chr1 (604-649)||(28838473-28838518)
chr1 (606-663)||(32486859-32486916)
chr1 (607-664)||(37351288-37351345)
chr1 (604-664)||(2730735-2730795)
chr1 (608-664)||(38872864-38872920)
chr1 (607-663)||(44396060-44396116)
chr1 (605-664)||(36302427-36302486)
chr1 (605-664)||(39759276-39759334)
chr1 (606-660)||(30056927-30056981)
chr1 (607-649)||(32005720-32005762)
chr1 (605-664)||(5904812-5904872)
chr1 (608-648)||(14556018-14556058)
chr1 (605-664)||(23253324-23253383)
chr1 (604-663)||(38459350-38459409)
chr1 (605-664)||(39758950-39759009)
chr1 (605-664)||(39764304-39764363)
chr1 (606-664)||(52346229-52346287)
chr1 (607-664)||(39950553-39950610)
chr1 (604-648)||(40124779-40124823)
chr1 (605-661)||(50755656-50755712)
chr1 (605-660)||(2731067-2731122)
chr1 (605-664)||(36726432-36726491)
chr1 (602-660)||(5132422-5132480)
chr1 (606-664)||(15875169-15875226)
chr1 (602-660)||(44519698-44519756)
chr1 (607-648)||(14291618-14291659)
chr1 (603-660)||(14556372-14556429)
chr1 (603-660)||(28486617-28486674)
[»] scaffold0170 (1 HSPs)
scaffold0170 (605-664)||(5810-5869)
[»] scaffold0302 (1 HSPs)
scaffold0302 (606-664)||(14125-14183)
[»] scaffold0079 (1 HSPs)
scaffold0079 (602-664)||(57746-57808)
[»] scaffold0009 (1 HSPs)
scaffold0009 (603-664)||(58774-58835)
[»] scaffold0044 (1 HSPs)
scaffold0044 (604-664)||(9584-9644)
[»] scaffold0045 (1 HSPs)
scaffold0045 (605-664)||(35694-35753)
[»] scaffold0651 (1 HSPs)
scaffold0651 (605-660)||(6029-6084)
[»] scaffold0036 (1 HSPs)
scaffold0036 (605-664)||(17191-17250)
[»] scaffold0421 (1 HSPs)
scaffold0421 (607-663)||(2951-3007)
[»] scaffold0275 (1 HSPs)
scaffold0275 (604-664)||(1562-1622)
[»] scaffold0185 (1 HSPs)
scaffold0185 (605-648)||(8062-8105)


Alignment Details
Target: chr3 (Bit Score: 566; Significance: 0; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 566; E-Value: 0
Query Start/End: Original strand, 8 - 585
Target Start/End: Original strand, 48643030 - 48643607
Alignment:
Q  8 agataatactggaatacaactatattgctgcttgtgatgcctatagcatactgattttattaggttgtcattgtctatggcttttcaaaaaggttatttc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48643030 agataatactggaatacaactatattgctgcttgtgatgcctatagcatactgattttattaggttgtcattgtctatggcttttcaaaaaggttatttc 48643129  T
Q  108 attttaataggaatggaatagtaacaacacgttatgcatcattgaatttcataaaccgttagttactggcttgtttttgaaacatgtgaaagttcaatta 207  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48643130 attttaatagggatggaatagtaacaacacgttatgcatcattgaatttcataaaccgttagttactggcttgtttttgaaacatgtgaaagttcaatta 48643229  T
Q  208 gtaactcactttcttttgtaggcaaatgttagtaagtgggtgattatgtcaattttcaagatttgaatcttaagcctctataaaactcgtttaataccca 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48643230 gtaactcactttcttttgtaggcaaatgttagtaagtgggtgattatgtcaattttcaagatttgaatcttaagcctctataaaactcgtttaataccca 48643329  T
Q  308 ttattttagctatttccttccgaacactaataatgtgcttatttgttgaacgacatattaatccaatttcgagttgataattaactagttccgagtttat 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48643330 ttattttagctatttccttccgaacactaataatgtgcttatttgttgaacgacatattaatccaatttcgagttgataattaactagttccgagtttat 48643429  T
Q  408 atgacatacatgattaatttgcttctttctagctatgtgagtatccattatctcaatcatcctctgctacactgttgatattttatgacatgaatgtgtt 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48643430 atgacatacatgattaatttgcttctttctagctatgtgagtatccattatcttaatcatcctctgctacactgttgatattttatgacatgaatgtgtt 48643529  T
Q  508 gttgttttctctaatcatcgtatcagtttgtagttcggtctaaagacttccccatctcgacaaaatagtatactacta 585  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48643530 ggtgttttctctaatcatcgtatcagtttgtagttcggtctaaagacttccccatctcgacaaaatagtatactacta 48643607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 3017586 - 3017527
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  3017586 aggtttaaatgtgtcattggtccctgcattttcatcagattttggcattggtccctgcac 3017527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 34682278 - 34682337
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  34682278 aggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcac 34682337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 51754312 - 51754252
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  51754312 taggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 51754252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 40037058 - 40036999
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  40037058 aggtttaaatgtgtcattggtccctgcattttcatcaaattttggcattggtccctgcac 40036999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 602 - 664
Target Start/End: Original strand, 29352400 - 29352462
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| ||| ||||||||||    
T  29352400 aataggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctgcac 29352462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 606 - 663
Target Start/End: Original strand, 47358150 - 47358207
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||    
T  47358150 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgca 47358207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 21441352 - 21441293
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||    
T  21441352 aggtttaaatgtgtcactggtccctgcactttcatcagattttggcattggtccctgcac 21441293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 604 - 663
Target Start/End: Original strand, 35565040 - 35565099
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    |||||||||||||||||||||||||| || |||||||||||||||| ||| |||||||||    
T  35565040 taggtttaaatgtgtcattggtccctacactttcatcagattttggcattggtccctgca 35565099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 16222890 - 16222832
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||| ||||||||||    
T  16222890 ggtttaaatgtgtcattggtccctacactttcatcagattttggcattggtccctgcac 16222832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 23461244 - 23461186
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||| ||||||||||    
T  23461244 ggtttaaatgtgtcattggtccctacactttcatcagattttggcattggtccctgcac 23461186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 44638677 - 44638623
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  44638677 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 44638623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 51761180 - 51761123
Alignment:
Q  607 gtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||||    
T  51761180 gtttaaatgtgtcattggtccctgcactttcatcatattttggcattagtccctgcac 51761123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 54803416 - 54803359
Alignment:
Q  607 gtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||  |||||||||    
T  54803416 gtttaaatgtgtcattggtccctgcacttttatcagattttggtattgatccctgcac 54803359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 51436997 - 51437056
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| |||| || |||||||    
T  51436997 aggtttaaatgtgtcattggtccctgcactttaatcagattttgatattggttcctgcac 51437056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 609 - 664
Target Start/End: Original strand, 52836632 - 52836687
Alignment:
Q  609 ttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||| ||||||||||||||  |||| ||||||||||    
T  52836632 ttaaatgtgtcattggtccctgcactttcatcagattttaatattggtccctgcac 52836687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 27957460 - 27957518
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||| |||||||| |||||||| |||||||||||||||| ||| ||||||||||    
T  27957460 ggtttaaatttgtcattgatccctgcactttcatcagattttggcattggtccctgcac 27957518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 648
Target Start/End: Complemental strand, 31705512 - 31705470
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  31705512 ggtttaaatgtgtcattggtccctgcactttcatcagattttg 31705470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 44398289 - 44398231
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| |||  |||||||||    
T  44398289 ggtttaaatgtgtaattggtccctgcactttcatcagattttggcattgatccctgcac 44398231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 47982363 - 47982421
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||||  |||||||||    
T  47982363 ggtttaaatgtatcattggtccctgcactttcatcaaattttggtattgatccctgcac 47982421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 47991650 - 47991708
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||||  |||||||||    
T  47991650 ggtttaaatgtatcattggtccctgcactttcatcaaattttggtattgatccctgcac 47991708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 48000937 - 48000995
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||||  |||||||||    
T  48000937 ggtttaaatgtatcattggtccctgcactttcatcaaattttggtattgatccctgcac 48000995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 48010224 - 48010282
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||||  |||||||||    
T  48010224 ggtttaaatgtatcattggtccctgcactttcatcaaattttggtattgatccctgcac 48010282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 607 - 648
Target Start/End: Complemental strand, 11692570 - 11692529
Alignment:
Q  607 gtttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  11692570 gtttaaatgtgtcattggtccctgcattttcatcaaattttg 11692529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 19988280 - 19988223
Alignment:
Q  607 gtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||| |||||||||||||||||| |||| ||||||||||| ||| ||||||||||    
T  19988280 gtttaaacgtgtcattggtccctgcactttcttcagattttggcattggtccctgcac 19988223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 38443315 - 38443375
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||| ||| ||| ||||||    
T  38443315 taggtttaaatgtgtcattggtccttgcacttttatcagattttggcattggtctctgcac 38443375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 54089839 - 54089898
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||| |||  |||||||||    
T  54089839 aggtttaaatgtgtcattggtccccgcacttttatcagattttggcattgatccctgcac 54089898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 602 - 664
Target Start/End: Original strand, 26050493 - 26050555
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||| ||||||||||||||||||||||  | |||||||||||||||| ||| ||| ||||||    
T  26050493 aatagatttaaatgtgtcattggtccctaaactttcatcagattttggcattggtcactgcac 26050555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 26920992 - 26920934
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||| |||||||||||||||| |||| ||| |||||||||||| |||||| |||||||    
T  26920992 ggttttaatgtgtcattggtccatgcacttttatcagattttggcatttgttcctgcac 26920934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 33092389 - 33092336
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    ||||||||||||||||||||||||||| |||||||| | ||||||||| ||||||    
T  33092389 ggtttaaatgtgtcattggtccctgcactttcatca-aatttggtattggtccct 33092336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 648
Target Start/End: Complemental strand, 55328851 - 55328809
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  55328851 ggtttaaatgtgtcattagtccctgcactttcatcagattttg 55328809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 16732331 - 16732273
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||| |||| |||||||| || |||| ||| ||| ||||||    
T  16732331 ggtttaaatgtgtcattggtccttgcactttcatcaaatgttggcattggtctctgcac 16732273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 636
Target Start/End: Complemental strand, 40791189 - 40791159
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcatttt 636  Q
    |||||||||||||||||||||||||||||||    
T  40791189 ggtttaaatgtgtcattggtccctgcatttt 40791159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 619 - 664
Target Start/End: Complemental strand, 19988237 - 19988192
Alignment:
Q  619 cattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||| |||| ||||||||||| ||| ||||||||||    
T  19988237 cattggtccctgcactttcttcagattttggcattggtccctgcac 19988192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 603 - 664
Target Start/End: Complemental strand, 54090225 - 54090164
Alignment:
Q  603 ataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||| |||| || |||| |||| |||||| ||||||||| ||| ||||||||||    
T  54090225 ataggtttaaatatgtctttagtccttgcactttcattagattttggcattggtccctgcac 54090164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 3e-22; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 27858720 - 27858662
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27858720 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtattggtccctgcac 27858662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 9176958 - 9177016
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  9176958 ggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcac 9177016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 603 - 664
Target Start/End: Original strand, 26408634 - 26408695
Alignment:
Q  603 ataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  26408634 ataggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 26408695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 608 - 664
Target Start/End: Original strand, 18705525 - 18705581
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  18705525 tttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcac 18705581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 20166481 - 20166421
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  20166481 taggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 20166421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 23592478 - 23592538
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||    
T  23592478 taggtttaaatgtgtcattggtccctgcactttcatcagattttgatattggtccctgcac 23592538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 27858387 - 27858446
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  27858387 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 27858446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 39412533 - 39412474
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  39412533 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 39412474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 973824 - 973884
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||||    
T  973824 taggtttaaatgtgtcattggtccctgcactttcatcaaattttggcattggtccctgcac 973884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 4716816 - 4716876
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||| || |||||||||| ||||||||| ||||||||||    
T  4716816 taggtttaaatgtgtcattggtcccttcactttcatcagaatttggtattggtccctgcac 4716876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 2268226 - 2268285
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| ||| ||||||||||    
T  2268226 aggtttaaatgtgtcattagtccctgcactttcatcagattttggcattggtccctgcac 2268285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 5907259 - 5907318
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||||    
T  5907259 aggtttaaatgtgtcattggtccctgcactttcatcaaattttggcattggtccctgcac 5907318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 602 - 664
Target Start/End: Original strand, 3023394 - 3023455
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||||| ||||||||||    
T  3023394 aataggtttaaatgtgtcattggttc-tgcactttcatcagattttggtattggtccctgcac 3023455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 8343442 - 8343384
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| || |||||||    
T  8343442 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggttcctgcac 8343384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 15443032 - 15442974
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| |||| |||||    
T  15443032 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccttgcac 15442974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 25945329 - 25945387
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||||    
T  25945329 ggtttaaatgtgacattggtccctgcactttcatcagattttggcattggtccctgcac 25945387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 11062730 - 11062673
Alignment:
Q  607 gtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  11062730 gtttaaacatgtcattggtccctgcactttcatcagattttggtattggtccctgcac 11062673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 16969097 - 16969040
Alignment:
Q  607 gtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||    
T  16969097 gtttaaatgtgtcattgatccctgcactttcatcagattttggcattggtccctgcac 16969040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 23592867 - 23592807
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||| |||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  23592867 taggtttaaacgtgtcattggtccctgcactttcatcagattttgacattggtccctgcac 23592807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 13198298 - 13198239
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||| |||||||| |||| |||||||||||||||| ||| ||||||||||    
T  13198298 aggtttaaatgtgttattggtccttgcactttcatcagattttggcattggtccctgcac 13198239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 648
Target Start/End: Original strand, 23910294 - 23910337
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  23910294 aggtttaaatgtgtcattggtccctgcactttcatcagattttg 23910337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 5214650 - 5214592
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||| |||| |||||||||||||||  ||| ||||||||||    
T  5214650 ggtttaaatgtgtcattggtccatgcactttcatcagattttgacattggtccctgcac 5214592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 22619447 - 22619505
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| |||  |||||||||    
T  22619447 ggtttaaatgtgtcattggtctctgcactttcatcagattttggcattgttccctgcac 22619505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 13197907 - 13197967
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||| |||  |||||||||    
T  13197907 taggattaaatgtgtcattggtccatgcactttcatcagattttggcattgatccctgcac 13197967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 17964648 - 17964707
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||| |||||| |||||| |||||||||||||| | ||| ||||||||||    
T  17964648 aggtttaaatgtgttattggttcctgcactttcatcagatttttgcattggtccctgcac 17964707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 18673909 - 18673968
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||| || ||| |||| ||||||| ||| ||||||||||    
T  18673909 aggtttaaatgtgtcattggtccctacacttttatcatattttggcattcgtccctgcac 18673968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 32792362 - 32792421
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||| ||| ||| ||||||    
T  32792362 aggtttaaatgtgtcattggtccctgcacttttatcaaattttggcattggtctctgcac 32792421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 602 - 660
Target Start/End: Complemental strand, 974243 - 974185
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    |||||| |||||| |||| || ||||||||| |||||||||||||||||||| ||||||    
T  974243 aataggcttaaatatgtctttagtccctgcactttcatcagattttggtattggtccct 974185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 605 - 647
Target Start/End: Original strand, 21747674 - 21747716
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagatttt 647  Q
    ||||||||||||||||||||||| | |||||||||||||||||    
T  21747674 aggtttaaatgtgtcattggtccttacattttcatcagatttt 21747716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 604 - 660
Target Start/End: Complemental strand, 2268669 - 2268613
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    ||||||||||| |||| || |||| |||| |||||||||||||||||||| ||||||    
T  2268669 taggtttaaatatgtctttagtccttgcactttcatcagattttggtattggtccct 2268613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 8144672 - 8144731
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||| |||||||  |||| ||| |||||||||||| ||| ||||||||||    
T  8144672 aggtttaaatgtgttattggtctatgcacttttatcagattttggcattggtccctgcac 8144731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 18036635 - 18036577
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||| ||| | |||||| ||||||||| |||  |||||||||    
T  18036635 ggtttaaatgtgtcattggtctctgtaatttcataagattttggcattgatccctgcac 18036577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 5e-21; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 26695821 - 26695761
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  26695821 taggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcac 26695761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 10837164 - 10837224
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  10837164 taggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 10837224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 30794805 - 30794865
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  30794805 taggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 30794865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 41441412 - 41441472
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  41441412 taggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 41441472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 34181546 - 34181487
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  34181546 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 34181487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 7050938 - 7050880
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  7050938 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 7050880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 27696696 - 27696754
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  27696696 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 27696754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 605 - 699
Target Start/End: Original strand, 32923723 - 32923818
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcacnnnnnnngtttggcattgatctctgca-tttgtaaa 699  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||       |||||||||||||| ||||| ||||||||    
T  32923723 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtctctgcactttttttgtttggcattgatccctgcactttgtaaa 32923818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 2232730 - 2232790
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  2232730 taggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcac 2232790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 2705553 - 2705494
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||    
T  2705553 aggtttaaatgtgtcattgatccctgcactttcatcagattttggcattggtccctgcac 2705494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 17696609 - 17696668
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  17696609 aggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcac 17696668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 42216670 - 42216611
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| ||| ||||||||||    
T  42216670 aggtttaaatgtgtcattggtccctgcactttcatcggattttggcattggtccctgcac 42216611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 9855307 - 9855365
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||    
T  9855307 ggtttaaatgtgtcattggtccctgtactttcatcagattttggcattggtccctgcac 9855365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 605 - 662
Target Start/End: Complemental strand, 4529030 - 4528973
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgc 662  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||    
T  4529030 aggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgc 4528973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 609 - 664
Target Start/End: Original strand, 2056723 - 2056778
Alignment:
Q  609 ttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| || |||||||    
T  2056723 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggttcctgcac 2056778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 603 - 664
Target Start/End: Complemental strand, 37406288 - 37406227
Alignment:
Q  603 ataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||| |||||||| |||| ||| |||||||||||| ||| ||||||||||    
T  37406288 ataggtttaaatgtgttattggtccttgcactttgatcagattttggcattggtccctgcac 37406227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 7230385 - 7230325
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||| |||  |||||||||    
T  7230385 taggtttaaatgtgtcattgatccttgcactttcatcagattttggcattgatccctgcac 7230325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 7678656 - 7678596
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||  |||| |||||||| ||||||| ||| ||||||||||    
T  7678656 taggtttaaatgtgtcattggtcgatgcactttcatcaaattttggcattggtccctgcac 7678596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 608 - 664
Target Start/End: Complemental strand, 42686402 - 42686346
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||| |||||| |||||| |||||||||||||||||||| || |||||||    
T  42686402 tttaaatgtgttattggttcctgcactttcatcagattttggtattggttcctgcac 42686346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 10495721 - 10495780
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||| |||||||| |||||||| |||||||||||||||  ||| ||||||||||    
T  10495721 aggtttaaatatgtcattgatccctgcactttcatcagattttgacattggtccctgcac 10495780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 648
Target Start/End: Original strand, 43857463 - 43857505
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  43857463 ggtttaaatgtgtcattggtccctgcactttcatcaaattttg 43857505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 44204557 - 44204497
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||| |||||||||| ||||||||||||| ||||   ||||||||||||| ||||||||||    
T  44204557 taggcttaaatgtgtaattggtccctgcactttcgcaagattttggtattggtccctgcac 44204497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 660
Target Start/End: Original strand, 2705162 - 2705217
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    |||||||||| |||| || |||| |||| |||||||||||||||||||| ||||||    
T  2705162 aggtttaaatatgtctttagtccttgcactttcatcagattttggtattggtccct 2705217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 660
Target Start/End: Complemental strand, 27697081 - 27697026
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    |||||||||| |||| || |||| ||||||||||||||||||||| ||| ||||||    
T  27697081 aggtttaaatatgtctttagtccttgcattttcatcagattttggcattggtccct 27697026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 605 - 663
Target Start/End: Original strand, 49716 - 49774
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  49716 aggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgca 49774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 8e-20; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 602 - 664
Target Start/End: Original strand, 38816233 - 38816295
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  38816233 aataggtttaaatgtgtcattggtccctgcactttcatcagattttggaattggtccctgcac 38816295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 31849812 - 31849752
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  31849812 taggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 31849752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 10336531 - 10336473
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  10336531 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattagtccctgcac 10336473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 602 - 664
Target Start/End: Original strand, 39102795 - 39102857
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||    
T  39102795 aataggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtctctgcac 39102857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 603 - 664
Target Start/End: Original strand, 19276636 - 19276697
Alignment:
Q  603 ataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  19276636 ataggtttaaatgtgtcattggtccctgcactttcatcagattttgaaattggtccctgcac 19276697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 604 - 648
Target Start/End: Complemental strand, 18733040 - 18732996
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18733040 taggtttaaatgtgtcattggtccctgcattttcatcagattttg 18732996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 6607635 - 6607694
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| ||| ||||||||||    
T  6607635 aggtttaaatgtgtcattggtccctgcactttcatccgattttggcattggtccctgcac 6607694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 6626581 - 6626522
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| ||| ||||||||||    
T  6626581 aggtttaaatgtgtcattggtccctgcactttcatccgattttggcattggtccctgcac 6626522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 21438655 - 21438596
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||    
T  21438655 aggtttaaatgtgtcattgatccctgcactttcatcagattttggcattggtccctgcac 21438596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 39384711 - 39384770
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  39384711 aggtttgaatgtgtcattggtccctgcactttcatcagattttggcattagtccctgcac 39384770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 48863559 - 48863500
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| ||| ||||||||||    
T  48863559 aggtttaaatgtgtcattggtccttgcactttcatcagattttggcattggtccctgcac 48863500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 2765061 - 2765119
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||| || |||||||    
T  2765061 ggtttaaatgtgttattggtccctgcactttcatcagattttggtattggttcctgcac 2765119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 610 - 664
Target Start/End: Complemental strand, 24000331 - 24000277
Alignment:
Q  610 taaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  24000331 taaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 24000277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 24164397 - 24164339
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||| ||||||||||    
T  24164397 ggtttaaatgtgtcattggtccctacactttcatcagattttggcattggtccctgcac 24164339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 602 - 664
Target Start/End: Complemental strand, 26175009 - 26174947
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| ||| |||| |||||    
T  26175009 aataggtttaaatgtgtcatttgtccctgcactttcatcagattttggcattggtccttgcac 26174947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 41320367 - 41320425
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||| |||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  41320367 ggtttacatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 41320425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 21766922 - 21766865
Alignment:
Q  607 gtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||    
T  21766922 gtttaaatgtgtcattggtccctgtactttcatcagattttggcattggtccctgcac 21766865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 608 - 664
Target Start/End: Complemental strand, 38567879 - 38567823
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||    
T  38567879 tttaaatgtgtcactggtccctgcactttcatcagattttggcattggtccctgcac 38567823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 608 - 664
Target Start/End: Complemental strand, 47913532 - 47913476
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||||||    
T  47913532 tttaaatgtgttattggtccctgcactttcatcagattttggcattggtccctgcac 47913476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 1795439 - 1795498
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||| |||||    
T  1795439 aggtttaaatgtgtcattggtccctgcactttcatcaaattttggaattggtccatgcac 1795498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 31657802 - 31657743
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||| ||||| | ||| ||||||||||    
T  31657802 aggtttaaatgtgtcattggtccctgcactttcatcaaattttagcattggtccctgcac 31657743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 47403847 - 47403906
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||  |||||||||    
T  47403847 aggtttaaatgagtcattggtccctgcactttcatcagattttggcattgatccctgcac 47403906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 35193318 - 35193376
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||| |||||||| ||||||| |||||||| ||| ||||||||||    
T  35193318 ggtttaaatgtgtcattgatccctgcactttcatcggattttggcattggtccctgcac 35193376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 595 - 664
Target Start/End: Complemental strand, 5850898 - 5850829
Alignment:
Q  595 aatttgcaataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||| ||| ||||||||||||||| ||||||| | || |||||||||||||||| ||| ||||||||||    
T  5850898 aatttacaaaaggtttaaatgtgtcgttggtccatacactttcatcagattttggcattggtccctgcac 5850829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 663
Target Start/End: Original strand, 17356599 - 17356660
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    |||||||||||||||||||||||||||| || |||||||| ||||||  ||| |||||||||    
T  17356599 aataggtttaaatgtgtcattggtccctacactttcatcaaattttgacattggtccctgca 17356660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 648
Target Start/End: Original strand, 8952415 - 8952459
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    |||||||||| |||||||||||||||||| |||||||||||||||    
T  8952415 taggtttaaacgtgtcattggtccctgcactttcatcagattttg 8952459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 608 - 648
Target Start/End: Complemental strand, 11638392 - 11638352
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  11638392 tttaaatgtgtcattggtccctgcactttcatcagattttg 11638352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 21276334 - 21276393
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||| ||| ||| ||||||    
T  21276334 aggtttaaatgtatcattggtccctgcactttcatcaaattttggcattggtctctgcac 21276393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 602 - 664
Target Start/End: Original strand, 36508060 - 36508122
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||| ||||||||||||||||||||| || | |||||||||||||||| ||| || |||||||    
T  36508060 aataagtttaaatgtgtcattggtccttgtactttcatcagattttggcattggtacctgcac 36508122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 47913121 - 47913173
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    ||||||||||| |||||||| |||| |||||||||||||||| ||| ||||||    
T  47913121 tttaaatgtgttattggtccttgcactttcatcagattttggcattggtccct 47913173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 8e-20; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 17203865 - 17203923
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  17203865 ggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcac 17203923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 33243169 - 33243227
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  33243169 ggtttaaatgtgtcattggtccctgcattttcatcagattttggcattggtccctgcac 33243227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 33360445 - 33360505
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  33360445 taggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 33360505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 6389911 - 6389970
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||    
T  6389911 aggtttaaatgtgtcattggtccctgcactttcatcagattttgatattggtccctgcac 6389970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 604 - 699
Target Start/End: Complemental strand, 14631145 - 14631049
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcacnnnnnnngtttggcattgatctctgca-tttgtaaa 699  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||  || ||||||       |||||||||||||||||||| ||||||||    
T  14631145 taggtttaaatgtgtcattggtccctgcactttcatcagattttggcattgatctctgcactttttttgtttggcattgatctctgcactttgtaaa 14631049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 9565996 - 9566054
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  9565996 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 9566054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 660
Target Start/End: Original strand, 3199306 - 3199361
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  3199306 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 3199361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 608 - 663
Target Start/End: Complemental strand, 6535791 - 6535736
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||    
T  6535791 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgca 6535736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 10143210 - 10143269
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||| ||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  10143210 aggtttaaatgtctcattggtccctgcactttcatcagattttggcattggtccctgcac 10143269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 21003186 - 21003127
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||  |||||||||    
T  21003186 aggtttaaatgtgtcattggtccctgcactttcatcagattttgatattgatccctgcac 21003127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 33706215 - 33706156
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||    
T  33706215 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattagtctctgcac 33706156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 1827056 - 1827114
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| ||| ||||||||||    
T  1827056 ggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctgcac 1827114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 2793034 - 2793092
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||||    
T  2793034 ggtttaaatgtgtcattggtccctgcactttcatcatattttggcattggtccctgcac 2793092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 21905472 - 21905414
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  21905472 ggtttaaatgtgtcattggtccctgcactttcatcagattttgccattggtccctgcac 21905414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 22695555 - 22695613
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  22695555 ggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcac 22695613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 604 - 661
Target Start/End: Original strand, 5997191 - 5997248
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctg 661  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||    
T  5997191 taggtttaaatgtgtcattggtccctgcactttcatcaaattttggcattggtccctg 5997248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 603 - 664
Target Start/End: Original strand, 12395660 - 12395721
Alignment:
Q  603 ataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||| |||||    
T  12395660 ataggtttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccatgcac 12395721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 605475 - 605535
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||| |||| || ||||||||||||| ||| ||||||||||    
T  605475 taggtttaaatgtgtcattggtccttgcacttccatcagattttggcattggtccctgcac 605535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 606 - 649
Target Start/End: Complemental strand, 16120624 - 16120581
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttgg 649  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  16120624 ggtttaaatgtgtcattggtccctgcactttcatcagattttgg 16120581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 611 - 664
Target Start/End: Complemental strand, 32219254 - 32219201
Alignment:
Q  611 aaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||| |||| |||||||||||||||| ||| ||||||||||    
T  32219254 aaatgtgtcattggtccttgcactttcatcagattttggcattggtccctgcac 32219201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 2182324 - 2182264
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||| |||  |||||||||    
T  2182324 taggcttaaatgtgtcattggtccctgcaatttcatcatattttgggattgatccctgcac 2182264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 16120401 - 16120459
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||| || || ||| |||| |||||    
T  16120401 ggtttaaatgtgtcattggtccctgcactttcatcagacttcggcattggtccttgcac 16120459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 16409154 - 16409096
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||| | |||||| |||||||||||||||  ||| ||||||||||    
T  16409154 ggtttaaatgtgtcattgattcctgcactttcatcagattttgacattggtccctgcac 16409096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 603 - 664
Target Start/End: Original strand, 3371332 - 3371393
Alignment:
Q  603 ataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||| |||||||||| ||||||||||||| ||||   ||||||||||||| ||||||||||    
T  3371332 ataggcttaaatgtgtaattggtccctgcactttcgcaagattttggtattggtccctgcac 3371393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 584079 - 584019
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||| |||||||| |||||| |||||| ||||||||| ||| ||||| ||||    
T  584079 taggtttaaatgtatcattggttcctgcactttcattagattttggcattcgtcccagcac 584019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 21904865 - 21904919
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    ||||||||| |||| || |||| |||| |||||||||||||||||||| ||||||    
T  21904865 ggtttaaatatgtctttagtccttgcactttcatcagattttggtattagtccct 21904919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 8e-20; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 34826097 - 34826039
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  34826097 ggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcac 34826039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 603 - 664
Target Start/End: Original strand, 9776968 - 9777029
Alignment:
Q  603 ataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  9776968 ataggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 9777029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 430934 - 430874
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  430934 taggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 430874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 32654231 - 32654171
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||    
T  32654231 taggtttaaatgtgtcattggtccctgcactttcatcagattttgatattggtccctgcac 32654171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 40691699 - 40691639
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  40691699 taggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 40691639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 2098679 - 2098620
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  2098679 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 2098620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 4903012 - 4902953
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  4903012 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 4902953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 32504394 - 32504336
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  32504394 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 32504336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 42814369 - 42814311
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  42814369 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattagtccctgcac 42814311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 608 - 664
Target Start/End: Original strand, 18707495 - 18707551
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  18707495 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 18707551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 45002843 - 45002903
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||||||||    
T  45002843 taggtttaaatgtgtcattggtccctgcactctcatcagattttggcattggtccctgcac 45002903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 3963052 - 3963111
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  ||| ||||||||||    
T  3963052 aggtttaaatgtgtcattggtccctgcattttcatcaaattttgacattggtccctgcac 3963111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 4902622 - 4902681
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  4902622 aggtttaaatgtgtcattggtccctgcactttcatcagattttgtcattggtccctgcac 4902681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 4950020 - 4950079
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  4950020 aggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcac 4950079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 604 - 663
Target Start/End: Complemental strand, 14827911 - 14827852
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| ||| |||||||||    
T  14827911 taggtttaaatgtgtcattggtccttgcactttcatcagattttggcattggtccctgca 14827852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 16265584 - 16265643
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  16265584 aggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcac 16265643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 4831531 - 4831473
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||    
T  4831531 ggtttaaatgtgtcattggtccctgcactttcatcatattttgacatttgtccctgcac 4831473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 8031432 - 8031374
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||| ||||||||||||||||||||  ||| ||||||||||    
T  8031432 ggtttaaatgtgtcattggtccttgcattttcatcagattttgacattggtccctgcac 8031374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 32927710 - 32927768
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  32927710 ggtttaaatatgtcattggtccctgcactttcatcagattttggcattggtccctgcac 32927768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 602 - 664
Target Start/End: Complemental strand, 41186663 - 41186601
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||  ||| ||||||||||    
T  41186663 aataggtttaaatgtgtcgttggtccctgcactttcatcagattttgacattggtccctgcac 41186601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 606 - 663
Target Start/End: Complemental strand, 9791607 - 9791550
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||  ||||||||    
T  9791607 ggtttaaatgtgtcattgatccctgcactttcatcagattttggtattgatccctgca 9791550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 608 - 664
Target Start/End: Complemental strand, 18478704 - 18478648
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||    
T  18478704 tttaaatgtgtcattggtccctggactttcatcagattttggcattggtccctgcac 18478648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 18907339 - 18907279
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||| |||| ||||||||||    
T  18907339 taggtttaaatgtgtcattggtctctgcacttttatcagattttgatattggtccctgcac 18907279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 39060786 - 39060726
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||  ||| ||||||||||    
T  39060786 taggtttaaatgtgtcattggtccctgcaattttatcagattttgacattggtccctgcac 39060726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 33850452 - 33850511
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||| ||||||||||||| |||||||||||||||| |||  |||||||||    
T  33850452 aggtttaaatgtgtaattggtccctgcactttcatcagattttggcattgatccctgcac 33850511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 970437 - 970495
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| |||  |||||||||    
T  970437 ggtttaaatgtgtaattggtccctgcactttcatcagattttggcattgatccctgcac 970495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 11108407 - 11108465
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||| || |||||||||||||||| |||  |||||||||    
T  11108407 ggtttaaatgtgtcattggtccctacactttcatcagattttggcattgatccctgcac 11108465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 648
Target Start/End: Original strand, 5673993 - 5674037
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||    
T  5673993 taggtttaaatgtgtcattggtccctgcacttttatcagattttg 5674037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 606 - 645
Target Start/End: Original strand, 19591442 - 19591481
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagatt 645  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  19591442 ggtttaaatgtgtcattggtccctgcactttcatcagatt 19591481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 608 - 663
Target Start/End: Complemental strand, 28625878 - 28625823
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    ||||||||||||||||||| ||||| |||||||||||||||  ||| |||||||||    
T  28625878 tttaaatgtgtcattggtcgctgcactttcatcagattttgacattggtccctgca 28625823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 609 - 664
Target Start/End: Original strand, 39060409 - 39060464
Alignment:
Q  609 ttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||| |||| || ||||||||| |||||||||||||||||||| ||||||||||    
T  39060409 ttaaatatgtctttagtccctgcactttcatcagattttggtattggtccctgcac 39060464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 648
Target Start/End: Complemental strand, 14102988 - 14102945
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||    
T  14102988 aggtataaatgtgtcattggtccctgcactttcatcaaattttg 14102945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 660
Target Start/End: Original strand, 14827497 - 14827552
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    |||||||||| || | || |||| |||| |||||||||||||||||||||||||||    
T  14827497 aggtttaaatatgcctttagtccttgcactttcatcagattttggtatttgtccct 14827552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 649
Target Start/End: Original strand, 41186247 - 41186292
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttgg 649  Q
    ||||||||||| |||| ||||||| |||| ||||||||||||||||    
T  41186247 taggtttaaatatgtctttggtccatgcactttcatcagattttgg 41186292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 13198971 - 13199031
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  13198971 taggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 13199031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 40147349 - 40147409
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  40147349 taggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 40147409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 322060 - 322001
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  322060 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 322001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 15168912 - 15168971
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  15168912 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 15168971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 51892662 - 51892721
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  51892662 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 51892721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 602 - 664
Target Start/End: Original strand, 16335052 - 16335114
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  16335052 aataggtttaaatctgtcattggtccctgcactttcatcagattttggcattggtccctgcac 16335114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 23205699 - 23205757
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  23205699 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 23205757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 42496342 - 42496284
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  42496342 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 42496284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 46009035 - 46008977
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  46009035 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 46008977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 52096955 - 52096897
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||    
T  52096955 ggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggttcctgcac 52096897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 604 - 661
Target Start/End: Complemental strand, 35378074 - 35378017
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctg 661  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  35378074 taggtttaaatgtgtcattggtccctgcaatttcatcagattttggcattggtccctg 35378017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 49263872 - 49263932
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||||||||||    
T  49263872 taggtttaaatgtgtcattggtccctgcactttcattagattttggcattggtccctgcac 49263932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 8445071 - 8445012
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||||||    
T  8445071 aggtttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccctgcac 8445012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 31317641 - 31317582
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| ||| ||||||||||    
T  31317641 aggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctgcac 31317582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 602 - 664
Target Start/End: Original strand, 888063 - 888125
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||| |||||    
T  888063 aataggtttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccatgcac 888125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 53940757 - 53940699
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||||||    
T  53940757 ggtttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccctgcac 53940699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 606 - 663
Target Start/End: Complemental strand, 45848685 - 45848628
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| ||| |||||||||    
T  45848685 ggtttaaatgtgtcattggtcccagcactttcatcagattttggcattggtccctgca 45848628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 608 - 664
Target Start/End: Original strand, 10616464 - 10616520
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||    
T  10616464 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtctctgcac 10616520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 605 - 661
Target Start/End: Original strand, 32384094 - 32384150
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctg 661  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| ||| |||||||    
T  32384094 aggtttaaatatgtcattggtccctgcactttcatcagattttggcattggtccctg 32384150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 608 - 660
Target Start/End: Complemental strand, 43980186 - 43980134
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  43980186 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 43980134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 45311194 - 45311254
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||| ||| ||||||||||    
T  45311194 taggtttaaatgtgtcattggtccctgtactttcatcatattttggcattggtccctgcac 45311254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 919177 - 919236
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| ||| ||| ||||||    
T  919177 aggtttaaatgtgtcattagtccctgcactttcatcagattttggcattggtctctgcac 919236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 606 - 661
Target Start/End: Complemental strand, 41965552 - 41965497
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctg 661  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| ||| |||||||    
T  41965552 ggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctg 41965497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 42207866 - 42207924
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| ||| ||||||||||    
T  42207866 aggtttaaatgtgtcattggtcc-tgcactttcatcagattttggcattagtccctgcac 42207924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 47690291 - 47690350
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||| ||| ||||||||||    
T  47690291 aggtttaaatgtgtcattggtccctgcactttcattagattatggcattggtccctgcac 47690350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 5813772 - 5813830
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||| ||||||||||    
T  5813772 ggtttaaatgtgtcattggtcccttcactttcttcagattttggcattggtccctgcac 5813830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 32328061 - 32328119
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||| ||| ||||||    
T  32328061 ggtttaaatgtgtcactggtccctgcactttcatcagattttggcattggtctctgcac 32328119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 604 - 649
Target Start/End: Complemental strand, 39210671 - 39210626
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttgg 649  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||    
T  39210671 taggtttaaatgtgtcattggtccctgcactttcatcaaattttgg 39210626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 605 - 649
Target Start/End: Complemental strand, 1922876 - 1922832
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttgg 649  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  1922876 aggtttaaatgtgtcattggtccttgcattttcatcatattttgg 1922832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 603 - 663
Target Start/End: Original strand, 40005411 - 40005473
Alignment:
Q  603 ataggtttaaatgtgtcat--tggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||  ||| |||||||||    
T  40005411 ataggtttaaatgtgtcatattggtccctgcactttcatcagattttgacattggtccctgca 40005473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 605 - 660
Target Start/End: Complemental strand, 51716538 - 51716483
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||| ||| ||||||    
T  51716538 aggtttaaatgtgttattggtccctgcactttcattagattttggcattggtccct 51716483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 602 - 660
Target Start/End: Complemental strand, 47690708 - 47690650
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    ||||||||||||| |||| || ||||||||| |||||||||||||||| ||| ||||||    
T  47690708 aataggtttaaatatgtctttagtccctgcactttcatcagattttggcattggtccct 47690650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 649
Target Start/End: Original strand, 29526247 - 29526292
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttgg 649  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||    
T  29526247 taggtttaaatgtgtctttggtccttgcactttcatcagattttgg 29526292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 609 - 694
Target Start/End: Original strand, 43561811 - 43561896
Alignment:
Q  609 ttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcacnnnnnnngtttggcattgatctctgcattt 694  Q
    |||||||||||||||||||||| | |||||||||||||||  ||| ||| ||||||       ||||||||||| || ||||||||    
T  43561811 ttaaatgtgtcattggtccctgtactttcatcagattttgacattcgtctctgcactttttttgtttggcattggtccctgcattt 43561896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 608 - 648
Target Start/End: Original strand, 44589028 - 44589068
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  44589028 tttaaatgtgtcattggttcctgcactttcatcagattttg 44589068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 648
Target Start/End: Complemental strand, 1614323 - 1614280
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    |||||||||||||||||||||||||||| |||||| | ||||||    
T  1614323 aggtttaaatgtgtcattggtccctgcactttcattaaattttg 1614280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 660
Target Start/End: Complemental strand, 43562107 - 43562052
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    |||||||||| || | || |||||||||||||||||||||||||| ||| ||||||    
T  43562107 aggtttaaatatgcctttagtccctgcattttcatcagattttggcattggtccct 43562052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 13086666 - 13086609
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||| ||||||||||||| | ||| |||||||||||| ||| ||||||||||    
T  13086666 ggtttaaatgtatcattggtccctgtacttt-atcagattttggcattggtccctgcac 13086609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 604 - 658
Target Start/End: Original strand, 52096564 - 52096618
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtcc 658  Q
    |||| |||||| |||| || |||||||||||||||||||||||||| ||| ||||    
T  52096564 taggcttaaatatgtctttagtccctgcattttcatcagattttggcattggtcc 52096618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 603 - 663
Target Start/End: Original strand, 44519337 - 44519397
Alignment:
Q  603 ataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  44519337 ataggtttaaatgtgtcattggtctctgcattttcatcagattttggcattggtccctgca 44519397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 1342432 - 1342490
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  1342432 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 1342490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 1366686 - 1366628
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  1366686 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 1366628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 39524269 - 39524327
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  39524269 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 39524327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 45950903 - 45950961
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  45950903 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 45950961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 6782976 - 6782916
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| ||| ||||||||||    
T  6782976 taggtttaaatgtgtcattggtccttgcactttcatcagattttggcattggtccctgcac 6782916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 28487036 - 28486976
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| ||| ||||||||||    
T  28487036 taggtttaaatgtgtcattggtccctgcactttcatcagatattggcattggtccctgcac 28486976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 47647856 - 47647916
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||    
T  47647856 taggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtctctgcac 47647916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 36465935 - 36465994
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  36465935 aggtttaaatgtgtcattggtccctgcactttcatcagattttgaaattggtccctgcac 36465994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 38717744 - 38717685
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| |||| |||||    
T  38717744 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccttgcac 38717685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 47671999 - 47672058
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  47671999 aggtttaaatgtgtcattggtccctgcactttcatcagatttaggcattggtccctgcac 47672058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 2930961 - 2931019
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  2930961 ggtttaattgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 2931019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 5132744 - 5132686
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  5132744 ggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcac 5132686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 602 - 664
Target Start/End: Original strand, 17077322 - 17077384
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||| |||| |||||||| ||||||| ||| ||||||||||    
T  17077322 aataggtttaaatgtgtcattggtccttgcactttcatcatattttggcattggtccctgcac 17077384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 49628127 - 49628185
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  49628127 ggtttaaatatgtcattggtccctgcactttcatcagattttggcattagtccctgcac 49628185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 603 - 664
Target Start/End: Complemental strand, 25379023 - 25378962
Alignment:
Q  603 ataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||    
T  25379023 ataggtttgaatgtgtcattggtccctgcactttcatcagattttggcattggtctctgcac 25378962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 604 - 649
Target Start/End: Complemental strand, 28838518 - 28838473
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttgg 649  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  28838518 taggtttaaatgtgtcattggtccctgcactttcatcagattttgg 28838473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 606 - 663
Target Start/End: Original strand, 32486859 - 32486916
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| ||| |||||||||    
T  32486859 ggtttaaatgtgtcattagtccctgcactttcatcagattttggcattggtccctgca 32486916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 37351345 - 37351288
Alignment:
Q  607 gtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| |||| |||||    
T  37351345 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccttgcac 37351288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 2730735 - 2730795
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||||||||||    
T  2730735 taggtttaaatgtgttattggtccctgcacttttatcagattttggcattggtccctgcac 2730795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 608 - 664
Target Start/End: Complemental strand, 38872920 - 38872864
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  38872920 tttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcac 38872864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 607 - 663
Target Start/End: Original strand, 44396060 - 44396116
Alignment:
Q  607 gtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    |||||||||||| ||||||||||||| ||||||||||||||| |||| |||||||||    
T  44396060 gtttaaatgtgttattggtccctgcactttcatcagattttgatattggtccctgca 44396116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 36302427 - 36302486
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| ||| |||| |||||    
T  36302427 aggtttaaatgtgtcattggtccatgcactttcatcagattttggcattggtccatgcac 36302486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 39759334 - 39759276
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||||    
T  39759334 aggtttaaatgtgtcattggtccctgcactttcatcaga-tttggcattggtccctgcac 39759276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 30056927 - 30056981
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| ||| ||||||    
T  30056927 ggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccct 30056981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 607 - 649
Target Start/End: Complemental strand, 32005762 - 32005720
Alignment:
Q  607 gtttaaatgtgtcattggtccctgcattttcatcagattttgg 649  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  32005762 gtttaaatgtgtcattggtccctgcactttcatcagattttgg 32005720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 5904812 - 5904872
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcag-attttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||| ||| ||||||||||    
T  5904812 aggtttaaatgtgtcattggtccctgcacttttatcagaattttggcattggtccctgcac 5904872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 608 - 648
Target Start/End: Original strand, 14556018 - 14556058
Alignment:
Q  608 tttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  14556018 tttaaatgtgtcattggtccctgcactttcatcagattttg 14556058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 23253324 - 23253383
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||| |  | |||||||||||||||| ||| ||||||||||    
T  23253324 aggtttaaatgtgtcattggtccttcaactttcatcagattttggcattggtccctgcac 23253383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 604 - 663
Target Start/End: Complemental strand, 38459409 - 38459350
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||  || |||||||||    
T  38459409 taggtttaaatgtgtaattggtccctgcactttcatcagtttttggctttggtccctgca 38459350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 39758950 - 39759009
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||| ||||||||| || || |||||||||||||||| ||| ||||||||||    
T  39758950 aggtttaaatgtatcattggtctctacactttcatcagattttggcattggtccctgcac 39759009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 39764304 - 39764363
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||| ||||||||| || || |||||||||||||||| ||| ||||||||||    
T  39764304 aggtttaaatgtatcattggtctctacactttcatcagattttggcattggtccctgcac 39764363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 52346229 - 52346287
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||| ||| ||||||||||    
T  52346229 ggtttaaatatgttattggtccatgcactttcatcagattttggcattggtccctgcac 52346287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 39950610 - 39950553
Alignment:
Q  607 gtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||| || |||||| |||||||||||||||| |||  |||||||||    
T  39950610 gtttaaatgtgtcatttgttcctgcactttcatcagattttggcattgatccctgcac 39950553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 604 - 648
Target Start/End: Original strand, 40124779 - 40124823
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    |||||||||||||||||||||||||| || |||||||| ||||||    
T  40124779 taggtttaaatgtgtcattggtccctacactttcatcaaattttg 40124823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 605 - 661
Target Start/End: Original strand, 50755656 - 50755712
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctg 661  Q
    |||||||||||||| |||||||||  || |||||||||||||||| ||| |||||||    
T  50755656 aggtttaaatgtgttattggtcccgacactttcatcagattttggcattggtccctg 50755712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 660
Target Start/End: Complemental strand, 2731122 - 2731067
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    |||||||||| |||| || |||| |||| |||||||||||||||||||| ||||||    
T  2731122 aggtttaaatatgtctttagtccttgcactttcatcagattttggtattggtccct 2731067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 36726491 - 36726432
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||  ||||||||||||||||||||  |||||||  || ||||||||||    
T  36726491 aggtttaaatgtgtgtttggtccctgcattttcatctaattttggctttggtccctgcac 36726432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 602 - 660
Target Start/End: Original strand, 5132422 - 5132480
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    ||||||||||||| |||| || |||| |||| |||||||||||||||| ||| ||||||    
T  5132422 aataggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccct 5132480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 15875226 - 15875169
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||| ||| || ||| |||||||||||| ||| ||||||||||    
T  15875226 ggtttaaatgtgtcattggt-cctacacttttatcagattttggcattggtccctgcac 15875169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 602 - 660
Target Start/End: Complemental strand, 44519756 - 44519698
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    ||||||||||||| |||| ||  ||| |||| |||||||||||||||||||| ||||||    
T  44519756 aataggtttaaatatgtctttaatccttgcactttcatcagattttggtattggtccct 44519698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 607 - 648
Target Start/End: Complemental strand, 14291659 - 14291618
Alignment:
Q  607 gtttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    |||||||||||| |||| |||||||| |||||||||||||||    
T  14291659 gtttaaatgtgttattgatccctgcactttcatcagattttg 14291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 603 - 660
Target Start/End: Complemental strand, 14556429 - 14556372
Alignment:
Q  603 ataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    ||||| |||||| | || || ||||||||| |||||||||||||||| ||||||||||    
T  14556429 ataggcttaaatatatctttagtccctgcactttcatcagattttggcatttgtccct 14556372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 603 - 660
Target Start/End: Original strand, 28486617 - 28486674
Alignment:
Q  603 ataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    |||||||||||| |||| || |||| |||| |||||||||||||||| ||| ||||||    
T  28486617 ataggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccct 28486674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 5869 - 5810
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  5869 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 5810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 664
Target Start/End: Original strand, 14125 - 14183
Alignment:
Q  606 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  14125 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 14183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 602 - 664
Target Start/End: Complemental strand, 57808 - 57746
Alignment:
Q  602 aataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  57808 aataggtttaaatctgtcattggtccctgcactttcatcagattttggcattggtccctgcac 57746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 603 - 664
Target Start/End: Complemental strand, 58835 - 58774
Alignment:
Q  603 ataggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| ||| ||||||||||    
T  58835 ataggtttaaatgtgtcattggtccatgcactttcatcagattttggcattggtccctgcac 58774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 9584 - 9644
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  9584 taggtataaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 9644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 35753 - 35694
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||  |||||||||    
T  35753 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattgatccctgcac 35694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 660
Target Start/End: Original strand, 6029 - 6084
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccct 660  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| ||| ||||||    
T  6029 aggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccct 6084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 17250 - 17191
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||| ||| ||||||||||    
T  17250 aggtttaaatgtgttattggtccctgcactttcattagattttggcattggtccctgcac 17191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0421 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 607 - 663
Target Start/End: Original strand, 2951 - 3007
Alignment:
Q  607 gtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgca 663  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||||  ||||||||    
T  2951 gtttaaatgtgtcattggttcctgcactttcatcagattttgatattgatccctgca 3007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 1622 - 1562
Alignment:
Q  604 taggtttaaatgtgtcattggtccctgcattttcatcagattttggtatttgtccctgcac 664  Q
    ||||||||||||||| |||||||| |||| |||||||||||||||| |||  |||||||||    
T  1622 taggtttaaatgtgtaattggtccttgcactttcatcagattttggcattgatccctgcac 1562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 648
Target Start/End: Original strand, 8062 - 8105
Alignment:
Q  605 aggtttaaatgtgtcattggtccctgcattttcatcagattttg 648  Q
    |||||||||| ||||| ||||||||||| |||||||||||||||    
T  8062 aggtttaaatatgtcactggtccctgcactttcatcagattttg 8105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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