View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2605_low_46 (Length: 285)
Name: NF2605_low_46
Description: NF2605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2605_low_46 |
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Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 15 - 271
Target Start/End: Original strand, 1676817 - 1677073
Alignment:
| Q |
15 |
acctgtgtttttggcaagggcatcaagatgatgaatatttcaaattcttttagcttctacaaaaagctaaaaccaattaacacatccaattttccaatat |
114 |
Q |
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| T |
1676817 |
acctgtgtttttggcaagggcatcaagatgatgaatatttcaaattcttttagcttttacaaaaagctaaaaccaattaacacatccaattttccaatat |
1676916 |
T |
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| Q |
115 |
atcttagtttgtgaagggaattactacttttacttggttggtttattgcaagcaaatgcttagttagaccaagtttatttcttccatttgttggtcatgc |
214 |
Q |
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| T |
1676917 |
atcttagtttgtgaagggaattactacttttacttggttggtttattgcaagcaaatgcttagttagaccaagtttatttcttccctttgttggtcatgc |
1677016 |
T |
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| Q |
215 |
ttggtggtggaggagcttctttgtatatatttttaaatagaatttaagatgatatat |
271 |
Q |
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| T |
1677017 |
ttggtggtggaggagcttctttgtatatatttttaaatagaatttcagatgatatat |
1677073 |
T |
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