View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2606_high_8 (Length: 420)
Name: NF2606_high_8
Description: NF2606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2606_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 393; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 2 - 398
Target Start/End: Complemental strand, 41152035 - 41151639
Alignment:
| Q |
2 |
atatccccagttaaacattctgaatgcactcttactagaacatcttgcccatctcctatgtttccctaagtaaccaataagaaattataattgagaaaaa |
101 |
Q |
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| T |
41152035 |
atatccccagttaaacattctgaatgcactcttactagaacatcttgcccatctcctatgtttccctaagtaaccaataagaaattataattgagaaaaa |
41151936 |
T |
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| Q |
102 |
tattatgctttaatttgtttaggttttcataaataaaattataagttccaagttttatcttgaaaatcaaattaactaagttatatttacctttacaaca |
201 |
Q |
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| T |
41151935 |
tattatgctttaatttgtttaggttttcataaataaaattataagttccaagttttatcttgaaaatcaaattaactaagttatatttacctttacaaca |
41151836 |
T |
|
| Q |
202 |
gccacatgctcagttccatccaactttgaactataacaatatgcttgaaatagaccccatttagtaggaagatgtgagacatatgttctttcaaccaatt |
301 |
Q |
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| T |
41151835 |
gccacatgctcagttccatccaactttgaactataacaatatgcttgaaatagaccccatttagtaggaagatgtgagacatatgttctttcaaccaatt |
41151736 |
T |
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| Q |
302 |
tctctcgctttcttcgataccttgaagcgtcacactcacatacattaacatcgttaagcgaatttgattggattagcttataatgaagtgcttattc |
398 |
Q |
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| T |
41151735 |
tctctcgctttcttcgataccttgaagcgtcacactcacatacattaacatcgttacgcgaatttgattggattagcttataatgaagtgcttattc |
41151639 |
T |
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