View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2608_low_12 (Length: 260)

Name: NF2608_low_12
Description: NF2608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2608_low_12
NF2608_low_12
[»] chr1 (81 HSPs)
chr1 (1-155)||(38478278-38478432)
chr1 (1-152)||(34725097-34725248)
chr1 (1-152)||(19414445-19414596)
chr1 (1-139)||(47214517-47214655)
chr1 (1-154)||(45812534-45812687)
chr1 (9-153)||(35253185-35253329)
chr1 (1-129)||(32632579-32632708)
chr1 (1-152)||(20004089-20004244)
chr1 (1-152)||(30395725-30395880)
chr1 (1-155)||(46247949-46248105)
chr1 (1-152)||(12126836-12126987)
chr1 (1-152)||(14617044-14617197)
chr1 (1-155)||(46991810-46991966)
chr1 (1-154)||(6925106-6925261)
chr1 (1-154)||(18944649-18944807)
chr1 (1-134)||(23768337-23768472)
chr1 (1-129)||(18724567-18724697)
chr1 (5-106)||(11596523-11596625)
chr1 (1-152)||(41319805-41319958)
chr1 (1-155)||(27201653-27201811)
chr1 (1-152)||(6983810-6983961)
chr1 (1-154)||(45402101-45402257)
chr1 (9-152)||(10668239-10668386)
chr1 (1-130)||(25468284-25468415)
chr1 (1-152)||(27474287-27474439)
chr1 (11-152)||(35005139-35005284)
chr1 (1-106)||(22930114-22930219)
chr1 (1-140)||(35117776-35117920)
chr1 (58-151)||(4349703-4349796)
chr1 (1-106)||(17470390-17470498)
chr1 (1-153)||(18741955-18742113)
chr1 (1-154)||(8197049-8197204)
chr1 (41-154)||(23796511-23796626)
chr1 (67-154)||(1517308-1517395)
chr1 (1-104)||(2435833-2435939)
chr1 (1-127)||(20036226-20036355)
chr1 (36-154)||(31382211-31382330)
chr1 (1-140)||(10378746-10378877)
chr1 (1-107)||(44485153-44485261)
chr1 (11-139)||(45264411-45264542)
chr1 (1-102)||(33222990-33223093)
chr1 (1-152)||(9939467-9939623)
chr1 (3-89)||(50760288-50760376)
chr1 (1-154)||(35019236-35019390)
chr1 (1-107)||(19932797-19932904)
chr1 (12-106)||(23371141-23371236)
chr1 (61-129)||(15505632-15505700)
chr1 (1-90)||(22327105-22327196)
chr1 (1-97)||(4430080-4430178)
chr1 (59-154)||(43768205-43768300)
chr1 (5-97)||(31272429-31272522)
chr1 (1-107)||(50811945-50812054)
chr1 (1-126)||(25290169-25290305)
chr1 (1-139)||(19701576-19701717)
chr1 (88-154)||(50606498-50606564)
chr1 (66-107)||(21910693-21910734)
chr1 (1-61)||(2435985-2436045)
chr1 (27-90)||(22324925-22324989)
chr1 (29-107)||(31442433-31442515)
chr1 (41-134)||(34148977-34149072)
chr1 (41-94)||(21723730-21723784)
chr1 (58-153)||(42304205-42304302)
chr1 (66-126)||(6358194-6358255)
chr1 (4-106)||(18335333-18335437)
chr1 (1-106)||(27136696-27136804)
chr1 (4-121)||(39214988-39215108)
chr1 (1-94)||(52910223-52910319)
chr1 (60-104)||(10158266-10158310)
chr1 (1-106)||(15511193-15511303)
chr1 (6-152)||(19974073-19974221)
chr1 (68-152)||(20999849-20999933)
chr1 (58-152)||(5549582-5549678)
chr1 (4-96)||(34679274-34679368)
chr1 (70-104)||(4430046-4430080)
chr1 (1-47)||(34714629-34714675)
chr1 (1-39)||(40424748-40424786)
chr1 (5-47)||(43768168-43768210)
chr1 (74-107)||(4249487-4249520)
chr1 (74-107)||(4249811-4249844)
chr1 (74-107)||(4250135-4250168)
chr1 (5-94)||(24564354-24564445)
[»] chr8 (53 HSPs)
chr8 (1-154)||(12670247-12670400)
chr8 (1-154)||(30454094-30454247)
chr8 (1-151)||(13160685-13160836)
chr8 (1-151)||(17823559-17823711)
chr8 (1-153)||(28817624-28817778)
chr8 (1-152)||(36720779-36720932)
chr8 (1-164)||(39460980-39461148)
chr8 (1-151)||(29521685-29521837)
chr8 (1-155)||(35261662-35261818)
chr8 (1-128)||(20869523-20869648)
chr8 (1-150)||(45071248-45071398)
chr8 (1-129)||(2626502-2626635)
chr8 (1-152)||(31457156-31457308)
chr8 (1-154)||(7136524-7136681)
chr8 (1-145)||(20284075-20284225)
chr8 (1-153)||(18164758-18164911)
chr8 (1-145)||(21070703-21070854)
chr8 (1-154)||(6760805-6760962)
chr8 (1-107)||(24365103-24365212)
chr8 (1-152)||(26954115-26954271)
chr8 (5-152)||(44530136-44530285)
chr8 (1-154)||(8897761-8897916)
chr8 (25-129)||(5135311-5135417)
chr8 (1-153)||(25250505-25250661)
chr8 (1-106)||(35105906-35106014)
chr8 (1-152)||(12625872-12626026)
chr8 (41-152)||(19729365-19729476)
chr8 (1-134)||(44781521-44781658)
chr8 (4-107)||(23000263-23000365)
chr8 (1-107)||(42083742-42083851)
chr8 (27-129)||(8483960-8484064)
chr8 (77-154)||(26102578-26102655)
chr8 (53-154)||(20869960-20870063)
chr8 (35-128)||(29877111-29877206)
chr8 (1-107)||(22598140-22598248)
chr8 (44-101)||(23286375-23286432)
chr8 (27-140)||(5689640-5689755)
chr8 (1-123)||(11748282-11748408)
chr8 (1-61)||(28407399-28407459)
chr8 (17-104)||(389642-389733)
chr8 (58-153)||(10857871-10857966)
chr8 (29-134)||(17250892-17251001)
chr8 (58-114)||(43942366-43942424)
chr8 (67-129)||(11000971-11001033)
chr8 (1-106)||(14018013-14018121)
chr8 (53-151)||(16225056-16225156)
chr8 (53-105)||(44742564-44742617)
chr8 (1-45)||(24245434-24245478)
chr8 (1-61)||(30962865-30962925)
chr8 (66-103)||(26457779-26457816)
chr8 (73-153)||(16013511-16013593)
chr8 (53-111)||(36918161-36918219)
chr8 (1-152)||(40604905-40605057)
[»] chr7 (68 HSPs)
chr7 (1-154)||(42391097-42391250)
chr7 (1-152)||(21172008-21172159)
chr7 (1-160)||(32758244-32758403)
chr7 (1-151)||(10693073-10693223)
chr7 (1-151)||(48735122-48735273)
chr7 (1-154)||(47077852-47078005)
chr7 (1-150)||(42476856-42477005)
chr7 (1-150)||(11741778-11741927)
chr7 (15-152)||(31591108-31591245)
chr7 (1-154)||(43557455-43557613)
chr7 (1-153)||(42805507-42805663)
chr7 (1-150)||(11617589-11617740)
chr7 (1-152)||(40463860-40464012)
chr7 (1-153)||(42798652-42798806)
chr7 (1-151)||(2541019-2541172)
chr7 (1-108)||(33871953-33872061)
chr7 (1-149)||(35334818-35334966)
chr7 (1-151)||(47716442-47716596)
chr7 (1-153)||(27629617-27629771)
chr7 (1-154)||(19426887-19427041)
chr7 (1-121)||(28362175-28362297)
chr7 (1-106)||(13805085-13805191)
chr7 (1-154)||(19265798-19265951)
chr7 (1-122)||(28078161-28078283)
chr7 (1-154)||(34626205-34626359)
chr7 (7-150)||(29907408-29907552)
chr7 (19-154)||(7879639-7879776)
chr7 (1-154)||(32233132-32233286)
chr7 (28-133)||(2662954-2663058)
chr7 (1-127)||(14099030-14099158)
chr7 (1-127)||(14409047-14409175)
chr7 (5-106)||(23419719-23419822)
chr7 (9-154)||(38262193-38262340)
chr7 (1-107)||(46354177-46354287)
chr7 (4-150)||(18747472-18747621)
chr7 (1-129)||(19266433-19266563)
chr7 (68-155)||(27889312-27889399)
chr7 (1-101)||(22699018-22699122)
chr7 (1-104)||(48123531-48123636)
chr7 (17-129)||(18512475-18512588)
chr7 (1-96)||(6736873-6736969)
chr7 (1-106)||(7644939-7645047)
chr7 (1-108)||(8148988-8149098)
chr7 (28-140)||(21566445-21566560)
chr7 (1-61)||(42495927-42495987)
chr7 (16-107)||(16341276-16341370)
chr7 (1-152)||(39123873-39124031)
chr7 (1-140)||(14732832-14732974)
chr7 (41-129)||(38604550-38604639)
chr7 (34-151)||(23231573-23231692)
chr7 (53-153)||(23618975-23619075)
chr7 (30-154)||(1408469-1408595)
chr7 (1-60)||(7193068-7193127)
chr7 (1-129)||(5180177-5180309)
chr7 (5-129)||(44123644-44123769)
chr7 (1-90)||(12473287-12473378)
chr7 (1-106)||(3469220-3469331)
chr7 (1-74)||(18327017-18327091)
chr7 (43-152)||(35787268-35787378)
chr7 (58-115)||(21139784-21139841)
chr7 (1-53)||(7794606-7794658)
chr7 (29-111)||(15108437-15108520)
chr7 (16-129)||(35203437-35203554)
chr7 (45-153)||(13792148-13792257)
chr7 (1-107)||(42101928-42102037)
chr7 (69-101)||(36267868-36267900)
chr7 (59-153)||(39093437-39093532)
chr7 (88-156)||(45811919-45811986)
[»] chr6 (43 HSPs)
chr6 (1-154)||(1346947-1347100)
chr6 (1-152)||(1354756-1354907)
chr6 (1-153)||(29355853-29356009)
chr6 (1-164)||(9161106-9161271)
chr6 (1-152)||(12221913-12222069)
chr6 (36-153)||(26097178-26097295)
chr6 (36-153)||(25557743-25557860)
chr6 (1-140)||(28007609-28007749)
chr6 (1-155)||(2166406-2166564)
chr6 (1-155)||(2178039-2178197)
chr6 (4-105)||(23240870-23240971)
chr6 (28-136)||(32579436-32579545)
chr6 (25-101)||(33138840-33138918)
chr6 (1-140)||(3815088-3815229)
chr6 (3-154)||(18277190-18277343)
chr6 (1-149)||(15866041-15866189)
chr6 (1-84)||(8409226-8409311)
chr6 (1-96)||(13905034-13905131)
chr6 (1-107)||(6024216-6024326)
chr6 (11-107)||(7947415-7947514)
chr6 (1-61)||(12063450-12063510)
chr6 (5-107)||(24097568-24097668)
chr6 (73-152)||(23930126-23930205)
chr6 (1-102)||(1941838-1941941)
chr6 (1-61)||(14975172-14975232)
chr6 (1-153)||(20400650-20400804)
chr6 (1-105)||(14553495-14553602)
chr6 (74-151)||(383760-383837)
chr6 (13-154)||(3116126-3116263)
chr6 (73-154)||(12892064-12892147)
chr6 (1-122)||(2755451-2755576)
chr6 (72-152)||(12885967-12886049)
chr6 (1-104)||(12889409-12889515)
chr6 (79-153)||(13267788-13267862)
chr6 (17-106)||(15865902-15865992)
chr6 (1-96)||(32728211-32728308)
chr6 (4-121)||(11849041-11849159)
chr6 (1-54)||(33922927-33922980)
chr6 (89-153)||(6808468-6808532)
chr6 (58-142)||(14341080-14341163)
chr6 (77-105)||(22967237-22967265)
chr6 (77-105)||(23821128-23821156)
chr6 (1-61)||(24734616-24734676)
[»] chr4 (84 HSPs)
chr4 (1-153)||(48598823-48598975)
chr4 (1-160)||(47528521-47528680)
chr4 (1-151)||(20224967-20225117)
chr4 (1-153)||(9832311-9832463)
chr4 (1-154)||(11054145-11054298)
chr4 (10-149)||(29207900-29208039)
chr4 (1-153)||(5648242-5648395)
chr4 (1-129)||(17043416-17043546)
chr4 (1-150)||(6430627-6430777)
chr4 (1-154)||(30639363-30639517)
chr4 (1-154)||(39077793-39077946)
chr4 (17-154)||(47443956-47444095)
chr4 (5-107)||(5306708-5306811)
chr4 (1-154)||(16408598-16408755)
chr4 (1-152)||(16911545-16911700)
chr4 (1-150)||(8473621-8473772)
chr4 (1-140)||(19027831-19027972)
chr4 (1-150)||(40915812-40915962)
chr4 (1-148)||(21646947-21647098)
chr4 (1-155)||(35567153-35567309)
chr4 (25-153)||(10277755-10277883)
chr4 (1-154)||(23501776-23501927)
chr4 (1-153)||(54175046-54175202)
chr4 (1-100)||(14590820-14590922)
chr4 (4-129)||(25463108-25463235)
chr4 (1-108)||(41018837-41018945)
chr4 (1-151)||(44363130-44363284)
chr4 (35-154)||(20639655-20639777)
chr4 (1-155)||(54730232-54730391)
chr4 (1-107)||(47441574-47441682)
chr4 (1-129)||(49938615-49938742)
chr4 (1-107)||(30496366-30496472)
chr4 (1-107)||(7385520-7385628)
chr4 (1-153)||(13256397-13256549)
chr4 (3-139)||(30690188-30690333)
chr4 (41-129)||(49796821-49796910)
chr4 (53-153)||(25629086-25629186)
chr4 (1-134)||(37494834-37494969)
chr4 (30-129)||(21489099-21489201)
chr4 (154-247)||(49304117-49304210)
chr4 (1-152)||(14983817-14983970)
chr4 (1-154)||(20908633-20908790)
chr4 (3-107)||(32629313-32629418)
chr4 (80-154)||(38786673-38786747)
chr4 (1-98)||(487187-487287)
chr4 (36-150)||(7909281-7909397)
chr4 (1-106)||(10660387-10660496)
chr4 (1-106)||(10874532-10874641)
chr4 (1-129)||(54967004-54967133)
chr4 (61-151)||(20225119-20225211)
chr4 (1-154)||(30352577-30352743)
chr4 (1-76)||(42164224-42164300)
chr4 (30-106)||(9987879-9987957)
chr4 (1-134)||(30581482-30581619)
chr4 (1-107)||(32478835-32478937)
chr4 (42-129)||(51865060-51865149)
chr4 (1-61)||(17315390-17315450)
chr4 (1-61)||(23580300-23580360)
chr4 (1-90)||(25343170-25343261)
chr4 (1-129)||(39029082-39029213)
chr4 (87-164)||(28494222-28494298)
chr4 (1-151)||(20405076-20405224)
chr4 (90-154)||(32484307-32484371)
chr4 (1-61)||(54640431-54640491)
chr4 (6-90)||(7038041-7038126)
chr4 (1-55)||(12257691-12257745)
chr4 (1-55)||(43035231-43035285)
chr4 (58-107)||(4222072-4222121)
chr4 (53-106)||(17079696-17079749)
chr4 (90-151)||(44718641-44718702)
chr4 (77-154)||(33836484-33836563)
chr4 (4-108)||(44357206-44357313)
chr4 (1-107)||(55766510-55766618)
chr4 (66-105)||(12711495-12711534)
chr4 (70-164)||(36816371-36816466)
chr4 (89-151)||(25388249-25388311)
chr4 (89-151)||(38755908-38755970)
chr4 (9-97)||(10379997-10380086)
chr4 (29-129)||(9037741-9037844)
chr4 (87-151)||(11394923-11394987)
chr4 (87-151)||(11404650-11404714)
chr4 (1-99)||(49938490-49938590)
chr4 (1-45)||(50856344-50856388)
chr4 (1-107)||(55830765-55830873)
[»] chr5 (54 HSPs)
chr5 (5-152)||(32703411-32703558)
chr5 (1-154)||(35710296-35710449)
chr5 (1-153)||(8169982-8170134)
chr5 (1-152)||(38879564-38879719)
chr5 (1-154)||(24448873-24449028)
chr5 (1-152)||(41014302-41014454)
chr5 (1-152)||(22861668-22861818)
chr5 (1-155)||(1405170-1405326)
chr5 (1-152)||(4619103-4619258)
chr5 (1-153)||(43334185-43334341)
chr5 (33-148)||(7368413-7368528)
chr5 (1-129)||(27328735-27328867)
chr5 (3-103)||(22907913-22908014)
chr5 (1-81)||(37024626-37024706)
chr5 (1-151)||(1565414-1565566)
chr5 (56-151)||(34154814-34154909)
chr5 (2-106)||(1850624-1850729)
chr5 (1-150)||(12006329-12006482)
chr5 (1-107)||(19142987-19143094)
chr5 (1-121)||(34074592-34074714)
chr5 (1-105)||(2838761-2838867)
chr5 (27-151)||(13801767-13801895)
chr5 (1-107)||(22600437-22600545)
chr5 (1-152)||(28516432-28516586)
chr5 (42-139)||(7097772-7097870)
chr5 (1-151)||(22187268-22187422)
chr5 (1-106)||(208972-209079)
chr5 (41-150)||(20135627-20135740)
chr5 (29-129)||(43574617-43574719)
chr5 (1-90)||(31299615-31299705)
chr5 (1-107)||(39301106-39301215)
chr5 (1-107)||(30006308-30006416)
chr5 (76-152)||(16957374-16957450)
chr5 (43-151)||(16880647-16880757)
chr5 (53-116)||(41425985-41426048)
chr5 (1-76)||(23974763-23974840)
chr5 (1-152)||(3771324-3771475)
chr5 (66-156)||(11657694-11657785)
chr5 (67-153)||(12477118-12477205)
chr5 (92-154)||(16028621-16028683)
chr5 (1-48)||(17419897-17419944)
chr5 (29-129)||(24323727-24323829)
chr5 (29-129)||(24360351-24360453)
chr5 (10-90)||(42924895-42924977)
chr5 (58-140)||(9794389-9794471)
chr5 (1-51)||(10634248-10634298)
chr5 (41-107)||(29334418-29334487)
chr5 (13-61)||(22025538-22025586)
chr5 (73-151)||(12575660-12575739)
chr5 (92-151)||(30877564-30877623)
chr5 (65-102)||(3176803-3176840)
chr5 (104-149)||(11462913-11462958)
chr5 (3-83)||(18698596-18698675)
chr5 (1-37)||(39079882-39079918)
[»] scaffold0187 (2 HSPs)
scaffold0187 (1-149)||(10052-10200)
scaffold0187 (1-149)||(20380-20528)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-153)||(30562-30714)
[»] chr2 (60 HSPs)
chr2 (1-152)||(21779260-21779411)
chr2 (1-152)||(8455315-8455468)
chr2 (1-151)||(23397749-23397899)
chr2 (1-152)||(9671163-9671315)
chr2 (9-154)||(10546153-10546301)
chr2 (1-151)||(14530301-14530455)
chr2 (1-154)||(25249735-25249889)
chr2 (1-151)||(10543681-10543835)
chr2 (1-107)||(12023963-12024070)
chr2 (1-152)||(11514419-11514571)
chr2 (1-134)||(99282-99415)
chr2 (9-159)||(14444720-14444871)
chr2 (1-153)||(21377072-21377225)
chr2 (1-107)||(22371040-22371145)
chr2 (1-152)||(5841011-5841166)
chr2 (1-155)||(17667985-17668141)
chr2 (1-151)||(25079717-25079870)
chr2 (1-155)||(17623547-17623703)
chr2 (1-153)||(17896242-17896397)
chr2 (1-152)||(24200622-24200777)
chr2 (34-154)||(36871509-36871629)
chr2 (7-152)||(44643511-44643659)
chr2 (1-106)||(5450268-5450376)
chr2 (3-107)||(25641487-25641592)
chr2 (1-153)||(27573604-27573757)
chr2 (7-139)||(19614981-19615116)
chr2 (1-107)||(19977758-19977866)
chr2 (1-107)||(4516395-4516503)
chr2 (1-151)||(40416871-40417023)
chr2 (1-157)||(45235811-45235970)
chr2 (1-139)||(31158451-31158593)
chr2 (1-152)||(39914305-39914458)
chr2 (11-107)||(23145742-23145840)
chr2 (11-107)||(23557532-23557630)
chr2 (1-106)||(17380282-17380388)
chr2 (1-88)||(17705478-17705567)
chr2 (1-154)||(24859985-24860138)
chr2 (3-104)||(31821390-31821491)
chr2 (15-129)||(32781310-32781426)
chr2 (1-86)||(7214517-7214604)
chr2 (1-129)||(33795268-33795398)
chr2 (1-151)||(14544046-14544201)
chr2 (53-151)||(25632546-25632644)
chr2 (41-151)||(40762234-40762346)
chr2 (66-134)||(24890461-24890529)
chr2 (7-107)||(44449427-44449529)
chr2 (1-90)||(29419946-29420041)
chr2 (41-139)||(30826060-30826158)
chr2 (1-129)||(26684642-26684774)
chr2 (12-95)||(2003592-2003678)
chr2 (1-61)||(44604837-44604897)
chr2 (1-129)||(44521395-44521525)
chr2 (66-107)||(13245139-13245180)
chr2 (81-134)||(31523296-31523349)
chr2 (17-106)||(12315697-12315787)
chr2 (27-90)||(15296468-15296533)
chr2 (41-122)||(30864446-30864528)
chr2 (91-152)||(34080176-34080237)
chr2 (14-140)||(17471544-17471674)
chr2 (90-154)||(41409936-41410000)
[»] chr3 (68 HSPs)
chr3 (1-153)||(1217095-1217247)
chr3 (1-159)||(22122909-22123067)
chr3 (1-151)||(39203521-39203671)
chr3 (24-151)||(31592877-31593004)
chr3 (1-156)||(40272807-40272964)
chr3 (1-152)||(13628789-13628944)
chr3 (1-154)||(13730599-13730756)
chr3 (1-150)||(22609771-22609921)
chr3 (1-154)||(26869712-26869866)
chr3 (1-152)||(29366719-29366874)
chr3 (45-157)||(15797271-15797383)
chr3 (1-152)||(16735446-16735598)
chr3 (1-150)||(7696893-7697037)
chr3 (1-154)||(46421031-46421189)
chr3 (1-154)||(52926216-52926362)
chr3 (1-152)||(12914034-12914187)
chr3 (4-153)||(516417-516571)
chr3 (1-129)||(8247709-8247841)
chr3 (1-107)||(34420687-34420796)
chr3 (1-141)||(6411832-6411973)
chr3 (1-107)||(26573132-26573240)
chr3 (1-153)||(5173717-5173872)
chr3 (1-135)||(9607208-9607346)
chr3 (57-153)||(34771362-34771458)
chr3 (1-154)||(7942995-7943150)
chr3 (1-153)||(53996563-53996718)
chr3 (1-101)||(4495714-4495816)
chr3 (1-98)||(45620881-45620981)
chr3 (36-153)||(54484730-54484850)
chr3 (7-106)||(33926094-33926195)
chr3 (4-121)||(30928177-30928296)
chr3 (1-78)||(10870025-10870103)
chr3 (1-140)||(19731007-19731148)
chr3 (2-119)||(8410899-8411016)
chr3 (28-151)||(14986989-14987116)
chr3 (7-101)||(54032609-54032705)
chr3 (11-156)||(54374340-54374488)
chr3 (25-151)||(10795423-10795553)
chr3 (41-155)||(49013469-49013587)
chr3 (29-140)||(829453-829567)
chr3 (46-153)||(26292382-26292489)
chr3 (7-108)||(45139519-45139624)
chr3 (1-107)||(25944474-25944583)
chr3 (42-107)||(47624088-47624154)
chr3 (53-149)||(353351-353449)
chr3 (42-151)||(45786214-45786327)
chr3 (1-140)||(45948849-45948993)
chr3 (4-140)||(19751586-19751724)
chr3 (70-152)||(25517169-25517251)
chr3 (76-155)||(24577917-24577996)
chr3 (76-155)||(24578007-24578086)
chr3 (15-102)||(52428526-52428616)
chr3 (1-51)||(53062043-53062093)
chr3 (85-154)||(24851298-24851367)
chr3 (91-152)||(30452892-30452953)
chr3 (41-94)||(31831244-31831297)
chr3 (3-76)||(12525414-12525489)
chr3 (53-96)||(9276323-9276366)
chr3 (34-106)||(50624998-50625072)
chr3 (35-102)||(31904906-31904975)
chr3 (29-101)||(43114918-43114994)
chr3 (113-154)||(6242282-6242323)
chr3 (28-105)||(55401208-55401288)
chr3 (5-61)||(9627724-9627780)
chr3 (1-103)||(33235535-33235641)
chr3 (1-61)||(35417921-35417981)
chr3 (2-110)||(29106555-29106665)
chr3 (9-85)||(39212003-39212081)
[»] scaffold0223 (1 HSPs)
scaffold0223 (9-151)||(11122-11264)
[»] scaffold0049 (1 HSPs)
scaffold0049 (4-151)||(58963-59114)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-153)||(13022-13175)
[»] scaffold0015 (1 HSPs)
scaffold0015 (27-152)||(48633-48758)
[»] scaffold0057 (4 HSPs)
scaffold0057 (1-154)||(46814-46969)
scaffold0057 (1-154)||(24769-24919)
scaffold0057 (31-152)||(43672-43794)
scaffold0057 (66-129)||(46729-46793)
[»] scaffold1176 (1 HSPs)
scaffold1176 (1-107)||(1631-1737)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-100)||(226456-226558)
[»] scaffold0180 (1 HSPs)
scaffold0180 (66-154)||(24130-24218)
[»] scaffold0036 (1 HSPs)
scaffold0036 (4-106)||(35062-35167)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-152)||(10793-10946)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-107)||(4140-4251)
[»] scaffold0167 (1 HSPs)
scaffold0167 (9-108)||(23590-23691)
[»] scaffold0954 (1 HSPs)
scaffold0954 (34-151)||(3560-3679)
[»] scaffold0018 (1 HSPs)
scaffold0018 (25-151)||(72867-72996)
[»] scaffold0031 (1 HSPs)
scaffold0031 (4-99)||(43115-43210)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-46)||(83858-83903)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-49)||(24647-24695)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-101)||(32913-33016)
[»] scaffold0867 (1 HSPs)
scaffold0867 (73-101)||(3719-3747)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-61)||(8874-8934)


Alignment Details
Target: chr1 (Bit Score: 111; Significance: 4e-56; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 38478432 - 38478278
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||    
T  38478432 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggaacc 38478333  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    ||||| |  || |||||||||| ||||||||||| ||||| ||||||||||||||    
T  38478332 ccttctcggaccctgcatatgcgggagctctagtgcaccgggttgccctttttta 38478278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 34725248 - 34725097
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  34725248 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacactaaatggtgggacc 34725149  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||  || |||||||||| ||||||||||| ||||| |||||||||||    
T  34725148 ccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 34725097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 19414445 - 19414596
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||||||| |||||||||||| |||||||||||||||||||| |||||||| | ||||||||  ||||||||||||||||||||||||||||||||||    
T  19414445 ttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttatgtaaaacaggttaaggctgcgtacaatacaccaaatggtgggacc 19414544  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||  || |||||||||| ||||||||||| ||||| |||||||||||    
T  19414545 ccttcccgtaccctgcatatgcgggagctctagtgcaccgggttgccctttt 19414596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 47214517 - 47214655
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  47214517 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtttaaaacagggtaaggttgcgtacaatacaccaaatggtgggacc 47214616  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacacc 139  Q
    |||||||| || |||||||||| ||||||||||| ||||    
T  47214617 ccttcccagaccctgcatatgcgggagctctagtgcacc 47214655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 45812687 - 45812534
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| || ||||||||||||  |||||| ||||||| ||||| || |||||||||| ||||||||||||||||||||||||    
T  45812687 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgtaaaagagggtaaggctgcatacaatacaccaaatggtgggacc 45812588  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||||| |||||||||| ||||||||||| ||||| |||||| ||||||    
T  45812587 ccttcccaaaccctgcatatgcgggagctctagtgcaccgggttgccttttttt 45812534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 35253329 - 35253185
Alignment:
Q  9 atgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttccca 108  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  35253329 atgtgactgaaagatcacgggttcaagtcctcgaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 35253230  T
Q  109 aactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
     || |||||||||| ||||||||||| |||||  |||||||||||    
T  35253229 gaccctgcatatgcgggagctctagtgcaccggattgcccttttt 35253185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 32632708 - 32632579
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    |||||||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  32632708 ttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggac 32632609  T
Q  100 cccttcccaaactctgcatatgcaggagct 129  Q
    |||||||||||| |||||||||| ||||||    
T  32632608 cccttcccaaaccctgcatatgcgggagct 32632579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 20004244 - 20004089
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||  |||| ||||||  |||||||||||||||||||||||  ||||||||    
T  20004244 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgg 20004145  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||||| || | |||||||| |||||| |||| ||||| |||||||||||    
T  20004144 gaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 20004089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 30395880 - 30395725
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||  ||||| ||||||||||||||| ||||||||||||  |||| ||||||| |||||||||||||||||||||||  ||||||||    
T  30395880 ttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgg 30395781  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||||  || | |||||||| |||||| |||| |||||||||||||||||    
T  30395780 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgccctttt 30395725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 46248105 - 46247949
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||||||||||||||| || ||||||||||||| | ||||||||||||||| |||||  ||| ||||| |||||||||||||||||||||||||||    
T  46248105 ttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtggga 46248006  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    |||||||||  || |||| ||||| |||||| ||||  |||| ||||||||||||||    
T  46248005 ccccttcccggaccctgcgtatgcgggagctttagtgtaccgggttgccctttttta 46247949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 12126987 - 12126836
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||||||||| | |||||||| ||||||| |||| || |||||||| |||||| |||||||| |||||||||||||||||||||||||| ||||||||    
T  12126987 ttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgtgtaaaacagggtaaggctgcgtacaatacaccaaattgtgggacc 12126888  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||  || |||||||||| |||||| |||| ||| | |||||||||||    
T  12126887 ccttcccggaccctgcatatgcgggagctgtagtgcactgcgttgccctttt 12126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 14617044 - 14617197
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaa--acagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||| ||||  |||  |||||| ||||||||||||||||||||||||||    
T  14617044 ttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggtaaggttgcgtacaatacaccaaatggtggga 14617143  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
     ||||||||  || |||||||||| |||||| |||| ||||| ||| |||||||    
T  14617144 tcccttcccggaccctgcatatgcgggagctttagtgcaccgggttaccctttt 14617197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 46991810 - 46991966
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||| |||||  ||| ||||||||| |||||||||||| ||||||||||    
T  46991810 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccgaatggtggga 46991909  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    |||||||||  || |||| ||||  |||||| |||| ||||| ||||||| ||||||    
T  46991910 ccccttcccggaccctgcgtatgtgggagctttagtgcaccgggttgcccattttta 46991966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 6925106 - 6925261
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||| |||||||||| ||||| | ||  |||||||||| |||||||||| ||||||||||    
T  6925106 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcggacaatacaccgaatggtggga 6925205  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||||   | |||| ||||| |||||| |||| |||||||||||| ||||||    
T  6925206 ccccttcccggtccctgcgtatgcgggagctttagtgcaccgagttgccttttttt 6925261  T

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Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 18944649 - 18944807
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||||||||| || |||||||| ||| ||||||||||||  |||| ||||||| |||||||||||||||||||||||  ||||||||    
T  18944649 ttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaacaatggtgg 18944748  T
Q  97 gaccccttcccaaactctgcatatgcaggagc-tctagtacaccgagttgccctttttt 154  Q
    |||||||||||  || |||| ||||| ||||| | |||| ||||| |||||||||||||    
T  18944749 gaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttttt 18944807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 23768472 - 23768337
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| || |||||||||| | ||||||||||||||| |||||  ||| |||||||||||||||||||||||||||||||||    
T  23768472 ttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtggga 23768373  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagt 134  Q
    | |||||||| || |||| ||||| |||||| ||||    
T  23768372 caccttcccagaccctgcgtatgcgggagctttagt 23768337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 18724697 - 18724567
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||  |||| ||||||| ||||||||| ||||||||||||||||  |||||    
T  18724697 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaaatcttggga 18724598  T
Q  99 ccccttcccaaactctgcatatgcaggagct 129  Q
    |||||||||  || || ||||||| ||||||    
T  18724597 ccccttcccggaccctacatatgcgggagct 18724567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 11596523 - 11596625
Alignment:
Q  5 tgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggacccct 103  Q
    |||||||||||||||| || |||||||||||||||||||||| |||||||| | ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  11596523 tgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaaaaacagggtaaggctgcgtataatacaccaaatggtgggacccct 11596622  T
Q  104 tcc 106  Q
    |||    
T  11596623 tcc 11596625  T

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Target: chr1; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 41319958 - 41319805
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||||||||| || |||| ||||||| ||||||| ||||||| |||||  ||| ||||||||||||||||||||||||||| |||||    
T  41319958 ttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatgatggga 41319859  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||||||| ||| || ||||||| |||| |  ||| ||| | |||||||||||    
T  41319858 ccccttcccgaacccttcatatgcgggagtttcagtgcactgggttgccctttt 41319805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 27201653 - 27201811
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacacc--aaatggtgg 96  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||||||||||||| |   |||||| ||||||||||||||||||||||  |||||||||    
T  27201653 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtacaatacaccaaaaatggtgg 27201752  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    |||||||||||  ||  ||| ||||| |||||| |||| ||  | ||||||||||||||    
T  27201753 gaccccttcccggaccttgcgtatgcgggagctttagtgcattgggttgccctttttta 27201811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 6983961 - 6983810
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||| ||||||||||||| || |||||||||||| ||||||||||| | || ||||||| |||||  ||||||||||||||||||||||||||||    
T  6983961 ttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcgtataaaaaacagggtaagtatgcgtacaatacaccaaatggtgggacc 6983862  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||| ||  || |||| || ||||||||| | || ||||| | |||||||||    
T  6983861 cctttccggaccctgcgtaggcaggagctttggtgcaccgggctgccctttt 6983810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 45402101 - 45402257
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagt--aagg-ctgcgtacaatacaccaaatggtgg 96  Q
    |||||||||||||| || ||||| ||||||||||||||| ||||||||||||||| ||||| ||| ||  |||  |||||||||||||||||||||||||    
T  45402101 ttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggttcaagttctgcgtacaatacaccaaatggtgg 45402199  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||||||| || |||| ||||| |||||| |||| ||||| ||||||| |||||    
T  45402200 gaccccttcccagaccctgcgtatgcgggagctttagtgcaccgggttgcccgttttt 45402257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 10668239 - 10668386
Alignment:
Q  9 atgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgggacccctt 104  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||  |||| ||||||  |||||| ||||||||||||||||  ||||||||||||||||    
T  10668239 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacaccaataatggtgggacccctt 10668338  T
Q  105 cccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||   | |||| ||||| |||||| |||| ||||| |||||||||||    
T  10668339 cccggtccctgcgtatgcgggagctttagtgcaccgggttgccctttt 10668386  T

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Target: chr1; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 25468415 - 25468284
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||||||| |||||  ||| |||||| |||||||||||||||||||||| |||    
T  25468415 ttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaatacaccaaatggttgga 25468316  T
Q  99 ccccttcccaaactctgcatatgcaggagctc 130  Q
    || ||||||| || |||| ||||| |||||||    
T  25468315 cctcttcccagaccctgcgtatgcgggagctc 25468284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 27474287 - 27474439
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||||||||| || |||||||||| | ||||||| ||||||| ||||| ||| | || ||||||||||||||||  |||||||||||    
T  27474287 ttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaaacagggcaaagctgcgtacaatacactgaatggtgggac 27474386  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||||||  || |||| ||||| |||||| |||| |||||  ||||||||||    
T  27474387 cccttcccggaccctgcgtatgcgggagctttagtgcaccggattgccctttt 27474439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 35005139 - 35005284
Alignment:
Q  11 gtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc--aaatggtgggaccccttcc 106  Q
    ||||||||||||| ||||||||||||| |  |||||||||||  |||| ||||||| |||||||||| |||||||||||  |||||||||||||||||||    
T  35005139 gtgactgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcc 35005238  T
Q  107 caaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |  || |||| ||||| || ||| |||| ||||| |||||||||||    
T  35005239 cggaccctgcgtatgcgggcgctttagtgcaccgggttgccctttt 35005284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22930219 - 22930114
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||||| |||| | ||||||| |||||| || | ||||||||||||||||||||||    
T  22930219 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaaaaacagggtaaggttgtg-acaatacaccaaatggtgggac 22930121  T
Q  100 cccttcc 106  Q
    |||||||    
T  22930120 cccttcc 22930114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 35117920 - 35117776
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaa--acagagtaaggctgcgtacaatacacc--aaatggtgg 96  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||| |||||||||| ||||  |||| ||||||||| ||||||||||||  ||||| |||    
T  35117920 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggctgtgtacaatacaccaaaaatgatgg 35117821  T
Q  97 gaccccttcccaaactctgcat-atgcaggagctctagtacaccg 140  Q
    |||||||||||  || |||| | ||||||||||| |||| |||||    
T  35117820 gaccccttcccggaccctgcgtaatgcaggagctttagtgcaccg 35117776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 4349703 - 4349796
Alignment:
Q  58 aaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||  || |||| ||||| |||||| |||| ||||| ||||||||||    
T  4349703 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 4349796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17470498 - 17470390
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc-aaatggtggg 97  Q
    ||||||||| ||||||||| ||| | ||||||||||||||||||||||||||  |||| ||||||| |||||||||||||||||||||| |||| |||||    
T  17470498 ttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatagtggg 17470399  T
Q  98 accccttcc 106  Q
    |||| ||||    
T  17470398 acccgttcc 17470390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 18742113 - 18741955
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctag-aaacagcctcttgtataaaa---cagagtaaggctgcgtacaatacaccaaa--tggt 94  Q
    ||||||||||||||||||||||| | |||||||| || | | |||||| || ||||||||||   ||| |||||||||||||||||||||||||  ||||    
T  18742113 ttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaaacagtcttttgtataaaaaaacagggtaaggctgcgtacaatacaccaaaaatggt 18742014  T
Q  95 gggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||||||||| || |||| |||||  ||||| |||| ||||| ||| ||||||||    
T  18742013 gggaccccttcccagaccctgcgtatgcgagagctttagtgcaccgggtttcccttttt 18741955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 8197049 - 8197204
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||  ||||||  |||| ||||||  |||||||| |||||| ||||||||||||| |||    
T  8197049 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggtaaggctacgtacagtacaccaaatggtagga 8197148  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||| |  || |||| ||||  |||||| ||||  |||| |||||||||||||    
T  8197149 ccccttctcggaccctgcgtatgttggagctttagtgtaccgggttgccctttttt 8197204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 23796511 - 23796626
Alignment:
Q  41 gaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacac 138  Q
    ||||||||||||||| |||||  ||  |||||| ||||||||||||||||||||||| |||||||||||| || |||||||||| |||||| |||| |||    
T  23796511 gaaacagcctcttgtgtaaaaatcaatgtaaggttgcgtacaatacaccaaatggtgagaccccttcccagaccctgcatatgctggagctttagtgcac 23796610  T
Q  139 cgagttgccctttttt 154  Q
    || | |||||||||||    
T  23796611 cgggctgccctttttt 23796626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 1517395 - 1517308
Alignment:
Q  67 taaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||||||||||||||||| ||||||||||||||| || || |||| |||||||||||| |||| ||||| |||||||||||||    
T  1517395 taaggctgcgtacaatacaccaattggtgggaccccttctcagaccctgcgtatgcaggagctttagtgcaccgggttgccctttttt 1517308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2435939 - 2435833
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacacc-aaatggtggg 97  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| |  |||| || ||||| |||||||||||||||| ||||||||||    
T  2435939 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaagcctgcgtacaatacaccaaaatggtggg 2435840  T
Q  98 acccctt 104  Q
    |||||||    
T  2435839 acccctt 2435833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 20036226 - 20036355
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaa---acagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||  ||||||| ||||   | || |||||  ||||| ||||||||||||||||||     
T  20036226 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaagagaaagggtaagattgcgttcaatacaccaaatggtgga 20036325  T
Q  98 accccttcccaaactctgcatatgcaggag 127  Q
    ||||||||||  || |||| ||||||||||    
T  20036326 accccttcccggaccctgcgtatgcaggag 20036355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 31382330 - 31382211
Alignment:
Q  36 tcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagt 134  Q
    |||| ||||||||||||||| ||||| |||  ||||||||||||||||||||||||||||||||||||||||   || |||||||||| |||||| || |    
T  31382330 tcctggaaacagcctcttgtgtaaaaacaggataaggctgcgtacaatacaccaaatggtgggaccccttcctggaccctgcatatgcgggagctttact 31382231  T
Q  135 acaccgagttgccctttttt 154  Q
      |||| |||||||||||||    
T  31382230 gtaccgggttgccctttttt 31382211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 10378877 - 10378746
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||  |        | ||||||| |||||||||||||||||||||||||||||||||||    
T  10378877 ttgttgtcacgtgactgaaaggttacgggttcaagtcctggaaagtg--------agaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 10378786  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccg 140  Q
    |||||    || |||||||||| |||||| |||| |||||    
T  10378785 ccttcttggaccctgcatatgcgggagctttagtgcaccg 10378746  T

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Target: chr1; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 44485261 - 44485153
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||||||||| |||||||| |||||||  |||||| |||||| || ||||| ||||| | |  ||||||||||||||||||||||||||||| |||    
T  44485261 ttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggtaaggctgcgtacaatacaccaaatggttgga 44485162  T
Q  99 ccccttccc 107  Q
    |||||||||    
T  44485161 ccccttccc 44485153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 45264542 - 45264411
Alignment:
Q  11 gtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt--ataaaacagagtaaggctgcgtacaatacaccaaa-tggtgggaccccttccc 107  Q
    |||| |||||||| ||  ||||||||||| |||||| ||||||||  | ||||||||||||||||| || |||||||||||| ||||||||||||||| |    
T  45264542 gtgattgaaaggtcacatgttcaagtcctggaaacaacctcttgtgcaaaaaacagagtaaggctgtgtgcaatacaccaaaatggtgggaccccttctc 45264443  T
Q  108 aaactctgcatatgcaggagctctagtacacc 139  Q
    | || |||||||||| |||||| |||| ||||    
T  45264442 agaccctgcatatgcgggagctttagtgcacc 45264411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33222990 - 33223093
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacacc-aaatggtggga 98  Q
    ||||||||||||||||||||||| |||| || ||||| | ||||||||||||||| | ||||||| | |||| ||||||||||||||| |||||||||||    
T  33222990 ttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaaaaacagggaaaggttgcgtacaatacaccaaaatggtggga 33223089  T
Q  99 cccc 102  Q
    ||||    
T  33223090 cccc 33223093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 9939467 - 9939623
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtata--aaacagagtaaggctgcgtacaatacacc--aaatggtgg 96  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||| |||||||| ||  |||||  |||||| ||||| |||||||||  |||||||||    
T  9939467 ttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggtaaggttgcgtgcaatacaccaaaaatggtgg 9939566  T
Q  97 ga-ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    || ||||||| |  || |||| ||||| |||||| |||| ||||| ||| |||||||    
T  9939567 gacccccttctcggaccctgcgtatgcgggagctttagtgcaccgggttaccctttt 9939623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 50760376 - 50760288
Alignment:
Q  3 gttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaa 89  Q
    |||||||||||||||| |||| |||||||||||||||  |||||||||||  |||||||||| | ||||||||||||| ||||||||||    
T  50760376 gttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactgggtaaggctgcgtataatacaccaa 50760288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 35019236 - 35019390
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||||  |||||||||||| || | ||||||||||  ||||| ||||||||||||||  |||  ||||||||| ||||||||||||| ||||||||    
T  35019236 ttgttgtcacatgactgaaaggtcacagattcaagtcctgtaaacaacctcttgtataaaaatcagtataaggctgcatacaatacaccaattggtggga 35019335  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||| ||||| || |||| |||||  ||||| |||| ||||| | |||| ||||||    
T  35019336 cccc-tcccagaccctgcgtatgcgagagctttagtgcaccgggctgccatttttt 35019390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19932904 - 19932797
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct-tgtataaaacagagtaaggctgcgtacaatacacc--aaatggtggg 97  Q
    ||||||||||||||||||||||| | ||||||||||  | || ||| ||| | |||| ||||||| ||||||||||||||||||||||  ||||||||||    
T  19932904 ttgttgtcatgtgactgaaaggtcatgggttcaagt--tggatacaacctttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtggg 19932807  T
Q  98 accccttccc 107  Q
    ||||||||||    
T  19932806 accccttccc 19932797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 23371141 - 23371236
Alignment:
Q  12 tgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaaca-gagtaaggctgcgtacaatacaccaaatggtgggaccccttcc 106  Q
    |||||||||||| ||||||||||||||||||||||||| ||||  ||||| | | | |||| || ||||||||||||||||| |||||||||||||    
T  23371141 tgactgaaaggtcacgggttcaagtcctagaaacagccacttgggtaaaaaacgggcaaggttgtgtacaatacaccaaatgctgggaccccttcc 23371236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 15505632 - 15505700
Alignment:
Q  61 acagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagct 129  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||    
T  15505632 acagggtaagactgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcgggagct 15505700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22327105 - 22327196
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaa 90  Q
    |||||||||||||||||||||||  |||||||||||||| |||||| |||||  |||| ||||||| ||||||||| |||| || |||||||    
T  22327105 ttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtacgatgcaccaaa 22327196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4430178 - 4430080
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||||||||||||||| ||||| ||||||| ||||| |  ||||||  |||||| |||||  ||| ||||| ||||||||||||||||||||||||||    
T  4430178 ttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtggg 4430080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 43768205 - 43768300
Alignment:
Q  59 aaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||| |||||||||| ||||||||||||| |||||||||||||||||| || |||| ||| | |||||| || | ||||| | |||||||||||    
T  43768205 aaacagggtaaggctgcctacaatacaccaattggtgggaccccttcccagaccctgcgtatacgggagctttaatgcaccgggctgccctttttt 43768300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 31272522 - 31272429
Alignment:
Q  5 tgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||| ||||||||||||| || |||||||||||| |||||| |||||||| | ||||||  |||||||||||||||  ||| |||||||||||    
T  31272522 tgtcacgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaacatggtaaggctgcgtacagcacatcaaatggtggg 31272429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 50811945 - 50812054
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt---ataaaacagagtaaggctgcgtacaatacacc-aaatggtgg 96  Q
    ||||||||| ||||||||||||| ||||  ||| ||||| |||||||| ||||||   | ||||||| |||||| ||||||||||||||| ||||||| |    
T  50811945 ttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggtaaggttgcgtacaatacaccaaaatggt-g 50812043  T
Q  97 gaccccttccc 107  Q
    |||||||||||    
T  50812044 gaccccttccc 50812054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 25290169 - 25290305
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaa--acagcctct--tgtataaaacagagtaaggc-----tgcgtacaatacacc--aa 89  Q
    ||||||||||||||||||||||| ||| ||||||||| | |||  |||||||||  |||| ||||||| |||||||     || ||||||||||||  ||    
T  25290169 ttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaaacagggtaaggcaaggttgtgtacaatacaccaaaa 25290268  T
Q  90 atggtgggaccccttcccaaactctgcatatgcagga 126  Q
    ||| | ||||||||||||| |||||||||||| ||||    
T  25290269 atgataggaccccttcccagactctgcatatgtagga 25290305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 19701576 - 19701717
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacacc-aaatggtggg 97  Q
    |||||||| ||||||||||| || ||||||| ||||| |  |||||||||||||| ||||| |    |||||| || |||||||||||| ||||||||||    
T  19701576 ttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaacttggtaaggatgggtacaatacaccaaaatggtggg 19701675  T
Q  98 accccttcccaaactctgcatatgcaggagctctagtacacc 139  Q
     |||||||||  || |||| ||||| |||||| |||| ||||    
T  19701676 gccccttcccggaccctgcgtatgcgggagctttagtgcacc 19701717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 50606498 - 50606564
Alignment:
Q  88 aaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||||||||||||||  || |||||||||| |||||| |||| ||||| |||||||||||||    
T  50606498 aaatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttttt 50606564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 21910734 - 21910693
Alignment:
Q  66 gtaaggctgcgtacaatacaccaaatggtgggaccccttccc 107  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  21910734 gtaaggttgcgtacaatacaccaaatggtgggaccccttccc 21910693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2436045 - 2435985
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||| |||| ||| |||||    
T  2436045 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaa 2435985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 22324925 - 22324989
Alignment:
Q  27 gggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaa 90  Q
    ||||||||||| | ||||||||||||||| ||||| ||| |||||||||| ||||||||||||||    
T  22324925 gggttcaagtcttggaaacagcctcttgtgtaaaaacagggtaaggctgcatacaatacaccaaa 22324989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 31442515 - 31442433
Alignment:
Q  29 gttcaagtcctagaaacagcctcttgt---ataaaacagagtaaggctgcgtacaatacacc-aaatggtgggaccccttccc 107  Q
    ||||||||| |||||||||||| || |   | ||||||| |||||| ||||||||||||||| ||||||||||||||||||||    
T  31442515 gttcaagtcttagaaacagccttttatgtaaaaaaacagggtaaggatgcgtacaatacaccaaaatggtgggaccccttccc 31442433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 34149072 - 34148977
Alignment:
Q  41 gaaacagcctcttgtata--aaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagt 134  Q
    ||||||||||||||| ||  ||| || |||||| ||||||||| | ||||||||||| ||||||||||   || |||||||||||||||| |||||    
T  34149072 gaaacagcctcttgtgtagaaaatagggtaaggttgcgtacaaaagaccaaatggtgagaccccttcctggaccctgcatatgcaggagcgctagt 34148977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 21723730 - 21723784
Alignment:
Q  41 gaaacagcctcttgtataaaac-agagtaaggctgcgtacaatacaccaaatggt 94  Q
    |||||||||||||||||||||  || ||||||||| |||||||||||||||||||    
T  21723730 gaaacagcctcttgtataaaaatagggtaaggctgagtacaatacaccaaatggt 21723784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 42304302 - 42304205
Alignment:
Q  58 aaaacagagtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    ||||||| |||||| |||||||||||||| |||  |||||||||||||||||  || |||| ||||  |||||| |||| |||||  |||||||||||    
T  42304302 aaaacagggtaaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccggattgcccttttt 42304205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 6358194 - 6358255
Alignment:
Q  66 gtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccaaactctgcatatgcagga 126  Q
    |||| ||||||||||| |||||||| |||||||||||||||||| || |||| |||||||||    
T  6358194 gtaaagctgcgtacaaaacaccaaaatggtgggaccccttcccagaccctgcgtatgcagga 6358255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 18335437 - 18335333
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaac--agagtaaggctgcgtacaatacaccaaatggtgggaccc 101  Q
    |||||||||| ||||||||| ||  ||| ||||||| ||||||| ||||||| |||||   || |||| | ||||||||||||| |||||| ||||||||    
T  18335437 ttgtcatgtgtctgaaaggtcacaagttaaagtcctggaaacagtctcttgtttaaaaattagggtaaagttgcgtacaatacatcaaatgatgggaccc 18335338  T
Q  102 cttcc 106  Q
     ||||    
T  18335337 tttcc 18335333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 27136804 - 27136696
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacacc-aaatggtggg 97  Q
    ||||||||| |||| || ||||  ||| |||||||| || | |||| |||||||| ||||| | |  |||||| ||||||||||||||| ||||||||||    
T  27136804 ttgttgtcacgtgattggaaggacacgagttcaagttctgggaacaacctcttgtgtaaaaaacatggtaaggttgcgtacaatacaccaaaatggtggg 27136705  T
Q  98 accccttcc 106  Q
    |||||||||    
T  27136704 accccttcc 27136696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 39215108 - 39214988
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaaca--gagtaaggctgcgtacaatacaccaaa-tggtgggacc 100  Q
    |||||| |||||| ||||||  |  |||||||| || |||||| |||||||| ||||| |  | ||||||||||||||||||  ||||| ||||||| ||    
T  39215108 ttgtcacgtgactaaaaggtcccaagttcaagtactggaaacaacctcttgtgtaaaaaactgggtaaggctgcgtacaatattccaaaatggtgggtcc 39215009  T
Q  101 ccttcccaaactctgcatatg 121  Q
    ||||||||||| |||| ||||    
T  39215008 ccttcccaaaccctgcgtatg 39214988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 52910223 - 52910319
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctctt--gt-ataaaacagagtaaggctgcgtacaatacaccaaatggt 94  Q
    ||||||||||||||||||||||| || ||||||| || | |||||||||||||  || | ||||||| ||| | ||| |||||||||||| ||||||    
T  52910223 ttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacagcctcttaggtaaaaaaacagggtaggactgtgtacaatacacctaatggt 52910319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 10158266 - 10158310
Alignment:
Q  60 aacagagtaaggctgcgtacaatacaccaaatggtgggacccctt 104  Q
    |||||||||| ||| |||||||||||||||||||||| |||||||    
T  10158266 aacagagtaatgctacgtacaatacaccaaatggtggcacccctt 10158310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 15511303 - 15511193
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcg--tacaatacacc-aaatggtg 95  Q
    ||||||| ||||| ||||||||| ||   || ||||||| ||||| ||||||||| |||||  ||| |||||||||||  ||||||||||| ||||||||    
T  15511303 ttgttgtaatgtggctgaaaggtcacatattgaagtcctggaaaccgcctcttgtgtaaaaaacagggtaaggctgcggatacaatacaccaaaatggtg 15511204  T
Q  96 ggaccccttcc 106  Q
    | |||||||||    
T  15511203 gtaccccttcc 15511193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 19974221 - 19974073
Alignment:
Q  6 gtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacacc-aaatggtgggacccct 103  Q
    |||| ||||||||||| | ||||||||||||| | |||||||||||  || | |||| || | |||| ||||||||||||||| ||||| |||||||| |    
T  19974221 gtcacgtgactgaaagatcacgggttcaagtcttggaaacagcctcaagtgtaaaaatagggcaaggttgcgtacaatacaccaaaatgatgggacccat 19974122  T
Q  104 tcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||  |||||   ||||| |||||| |||| ||| | | |||||||||    
T  19974121 tcccggactctatgtatgcgggagctttagtgcacggggctgccctttt 19974073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 20999933 - 20999849
Alignment:
Q  68 aaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||||||||||||||||||||||| |||| ||||||||   || |||| || || |||||| |||| ||||| | |||||||||    
T  20999933 aaggctgcgtacaatacaccaaatgatggggccccttccggcaccctgcgtacgcgggagctttagtgcaccgggctgccctttt 20999849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 5549582 - 5549678
Alignment:
Q  58 aaaacagagtaaggctgcgtacaatacaccaaa---tggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||||| |||| |||||| |||||||||||||   || ||||||||||| |   ||||||| |||||||||||| |||||||| | |||||||||||    
T  5549582 aaaacagggtaaagctgcgcacaatacaccaaaaaatgatgggacccctttctggactctgcctatgcaggagctttagtacacag-gttgccctttt 5549678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 34679368 - 34679274
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtgg 96  Q
    |||||||||||||||||  | ||  |||| | ||||||||||| |||||  |||| ||||||| ||||| |||||||| ||||| ||||||||||    
T  34679368 ttgtcatgtgactgaaatatcacatgttccattcctagaaacaacctcttgtgtaaaaaacagggtaagactgcgtactatacatcaaatggtgg 34679274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 104
Target Start/End: Complemental strand, 4430080 - 4430046
Alignment:
Q  70 ggctgcgtacaatacaccaaatggtgggacccctt 104  Q
    ||||||||||||||||||||||||||| |||||||    
T  4430080 ggctgcgtacaatacaccaaatggtggaacccctt 4430046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34714629 - 34714675
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacag 47  Q
    |||||||||||||| |||||||| ||||||||||||| | |||||||    
T  34714629 ttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaacag 34714675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40424748 - 40424786
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcct 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  40424748 ttgttgtcatgtgactgaaaggccacgggttcaagtcct 40424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 43768168 - 43768210
Alignment:
Q  5 tgtcatgtgactgaaaggttacgggttcaagtcctagaaacag 47  Q
    |||||||| |||||||||| ||||||||||||||| |||||||    
T  43768168 tgtcatgtcactgaaaggtcacgggttcaagtcctggaaacag 43768210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 4249520 - 4249487
Alignment:
Q  74 gcgtacaatacaccaaatggtgggaccccttccc 107  Q
    ||||||||||||||||||||||||| ||||||||    
T  4249520 gcgtacaatacaccaaatggtgggatcccttccc 4249487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 4249844 - 4249811
Alignment:
Q  74 gcgtacaatacaccaaatggtgggaccccttccc 107  Q
    ||||||||||||||||||||||||| ||||||||    
T  4249844 gcgtacaatacaccaaatggtgggatcccttccc 4249811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 4250168 - 4250135
Alignment:
Q  74 gcgtacaatacaccaaatggtgggaccccttccc 107  Q
    ||||||||||||||||||||||||| ||||||||    
T  4250168 gcgtacaatacaccaaatggtgggatcccttccc 4250135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 24564354 - 24564445
Alignment:
Q  5 tgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggt 94  Q
    |||| ||||| ||||||||  | | |||||||| | |||||| |||||||| |||||  ||| |||||| |||||||||| |||||||||||    
T  24564354 tgtcttgtgattgaaaggtcgcagattcaagtcttggaaacaacctcttgtgtaaaaaacagggtaagggtgcgtacaattcaccaaatggt 24564445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 12670400 - 12670247
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  12670400 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 12670301  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||  || |||||||||| ||||||||||| ||||| ||| |||||||||    
T  12670300 ccttcccggaccctgcatatgcgggagctctagtgcaccgggttaccctttttt 12670247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 30454247 - 30454094
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||  |||||||||||||| ||||||||||||||||||||    
T  30454247 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacaaggtaaggctgcgtacgatacaccaaatggtgggacc 30454148  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||  || |||||||||| ||||||||||| ||||| |||||||||||||    
T  30454147 ccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 30454094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 13160685 - 13160836
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  13160685 ttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggac 13160784  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||||||  || |||| ||||| ||||||  ||| | ||| ||||||||||    
T  13160785 cccttcccggaccctgcgtatgcgggagcttcagtgcgccgggttgcccttt 13160836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 17823559 - 17823711
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| |||||  |||  |||| ||||||| ||||||||||||||||| |    
T  17823559 ttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggataagactgcgtaaaatacaccaaatggtggaa 17823658  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||||||| ||| ||||||||||||||||| |||| ||||| ||||||||||    
T  17823659 ccccttcccgaaccctgcatatgcaggagctttagtgcaccgggttgcccttt 17823711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 28817778 - 28817624
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| |||||  ||| |||||||||||||||||||||| ||||||||||    
T  28817778 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacccaatggtggga 28817679  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||||  || |||| ||||| |||||| |||| || || ||||||||||||    
T  28817678 ccccttcccggaccctgcgtatgcgggagctttagtgcatcgggttgcccttttt 28817624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 36720779 - 36720932
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| |||||  ||| |||||||||||||||||||||||||||||||||    
T  36720779 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtggga 36720878  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||  || |||| ||||| | |||| |||| ||||  |||||||||||    
T  36720879 ccccttcccggaccctgcgtatgcggaagctttagtgcacccggttgccctttt 36720932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 39461148 - 39460980
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||  |||| |||||||||||||||||||||||||||||||  |||||||     
T  39461148 ttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtga 39461049  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttttat-tatatata 164  Q
    |||||||||||  || |||| ||||| |||||| |||| ||||| ||||||||||| ||| ||||||||    
T  39461048 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttatatatatatata 39460980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 29521837 - 29521685
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||| |||||  ||| |||||||||||||||||||||||||||||||||    
T  29521837 ttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgtacaatacaccaaatggtggga 29521738  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
     ||| ||||| || |||| ||||| |||||| |||| ||||| ||||| ||||    
T  29521737 acccatcccagaccctgcgtatgcgggagctttagtgcaccgggttgctcttt 29521685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 35261662 - 35261818
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| ||||||||||| ||| ||||||| ||||||| |||||  ||| |||||| ||||||||||||||||||||||||||    
T  35261662 ttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaatggtggga 35261761  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    ||||||||   || |||| ||||| |||||| |||| ||||| ||||||||||||||    
T  35261762 ccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttta 35261818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 20869648 - 20869523
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||  |||| ||||    
T  20869648 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacagggtaaggctgtgtacaatacaccaa--ggtgagacc 20869551  T
Q  101 ccttcccaaactctgcatatgcaggagc 128  Q
    |||||||  || |||||||||| |||||    
T  20869550 ccttcccggaccctgcatatgcgggagc 20869523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 45071248 - 45071398
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    |||||||||||||| || ||||| |||||||||||| || ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  45071248 ttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggac 45071347  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    ||||||||  ||  ||| ||||| ||||||  ||| ||||| |||||||||    
T  45071348 cccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 45071398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 2626502 - 2626635
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt-----ataaaacagagtaaggctgcgtacaatacaccaaatggtg 95  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||     | ||||||| ||||| ||||||||||||||||||||| ||    
T  2626502 ttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaaatgatg 2626601  T
Q  96 ggaccccttcccaaactctgcatatgcaggagct 129  Q
    ||||||||||||| || |||||||||| ||||||    
T  2626602 ggaccccttcccagaccctgcatatgcgggagct 2626635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 31457156 - 31457308
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaac-agagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||| ||||||||| |||||||||||||||  ||||| |||||||| |||||  ||   |||||||||||||||||| |||||||| ||||    
T  31457156 ttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaataggaaaaggctgcgtacaatacatcaaatggtaggac 31457255  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||||| |||| ||||| ||||||||||| |||||  ||||||||||    
T  31457256 cccttcccaaaccctgcgtatgcgggagctctagtgcaccggattgccctttt 31457308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 7136681 - 7136524
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||| ||||| | ||||||||||||| |||||| |||||||| |||||  ||| |||||||||||||||||||||||  ||||||||    
T  7136681 ttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgcgtacaatacaccaataatggtgg 7136582  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||||||  || | |||||||| |||||| |||| ||||| ||| |||||||||    
T  7136581 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttaccctttttt 7136524  T

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Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 20284225 - 20284075
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga----gtaaggctgcgtacaatacacca--aatggt 94  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | |    |||||||||||||||||||||||  ||||||    
T  20284225 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgtacaatacaccaataatggt 20284126  T
Q  95 gggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttg 145  Q
    |||||||||||||  || |||| ||||| |||| | |||| ||||| ||||    
T  20284125 gggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgggttg 20284075  T

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Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 18164911 - 18164758
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | ||||||| |||||| |||||||||||||||||| | || |||    
T  18164911 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggttgcgtacaatacaccaaaggatgtgac 18164812  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |  |||||  || |||| ||||| |||||| |||| ||||| |||||| |||||    
T  18164811 catttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccattttt 18164758  T

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Target: chr8; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 21070854 - 21070703
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga-----gtaaggctgcgtacaatacacca--aatgg 93  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | |     |||||||||||||||||||||||  |||||    
T  21070854 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaataatgg 21070755  T
Q  94 tgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttg 145  Q
    ||||||||||||||  || |||| ||||| |||| | |||| ||||| ||||    
T  21070754 tgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgggttg 21070703  T

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Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 6760805 - 6760962
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    |||||||||| |||||  ||||| ||||||||||||||| ||||||||||||  |||| ||||||| |||||||| ||||||||||||||  ||||||||    
T  6760805 ttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtacaatacaccaataatggtgg 6760904  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||| |  || | |||||||| |||||| |||| ||||| |||||||||||||    
T  6760905 gaccccttctcggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 6760962  T

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Target: chr8; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 24365212 - 24365103
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa---cagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    |||||||||||||||| ||| || ||||||||||| ||||||||||||||||||| |||||   ||| ||||||||||| ||||||||||||||||||||    
T  24365212 ttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggtaaggctgcgaacaatacaccaaatggtggg 24365113  T
Q  98 accccttccc 107  Q
    ||||||||||    
T  24365112 accccttccc 24365103  T

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Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 26954115 - 26954271
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt---ataaaacagagtaaggctgcgtacaatacacca--aatggtg 95  Q
    |||||||||||||| |  ||||| ||||||||||||||| |||||||||||||||   | ||||||| |||||||||||||||||||||||  |||||||    
T  26954115 ttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaataatggtg 26954214  T
Q  96 ggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||||||||||| ||   |||||||| |||||| |||| ||| | |||||||||||    
T  26954215 ggaccccttcccagacctcgcatatgcgggagctttagtgcactgggttgccctttt 26954271  T

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Target: chr8; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 44530136 - 44530285
Alignment:
Q  5 tgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggacccc 102  Q
    ||||||||||||  ||||| ||||||||||||| | |||||| |||||||| |||||  ||| |||||||||||||||||||||||||||||||||||||    
T  44530136 tgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggacccc 44530235  T
Q  103 ttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||   || |||| ||||| |||||| |||| ||||| |||| ||||||    
T  44530236 ttcctggaccctgcgtatgcgggagctttagtgcaccgggttgacctttt 44530285  T

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Target: chr8; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 8897916 - 8897761
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||| | ||||| ||||||| ||||||| |||||| || ||||| ||||| | ||  ||||||| ||||||||||||||||||||||||    
T  8897916 ttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtacaatacaccaaatggtggga 8897817  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||||  || |||||||||| |||||| || | ||||  |||||||||||||    
T  8897816 ccccttcccggaccctgcatatgcgggagctttactgcacccggttgccctttttt 8897761  T

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Target: chr8; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 5135417 - 5135311
Alignment:
Q  25 acgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgc 122  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||  |||||||| ||||||||||||||||||||||||||||||||  || |||| |||||    
T  5135417 acgggttcaagtcctggaaacagcctcttgtgtaaaaaagagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 5135318  T
Q  123 aggagct 129  Q
    |||||||    
T  5135317 aggagct 5135311  T

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Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 25250505 - 25250661
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||| ||||| ||  ||||||||||| |||||||||| |  |||| |||| || ||| |||||||||||||||||||  ||||||||    
T  25250505 ttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggtatggctgcgtacaatacaccaataatggtgg 25250604  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    ||||||||||| ||| | |||||||| |||| | |||| ||||| ||||||||||||    
T  25250605 gaccccttcccgaaccccgcatatgcgggagatttagtgcaccgggttgcccttttt 25250661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 35105906 - 35106014
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacacca-aatggtggg 97  Q
    ||||||||| ||| ||||||||| ||||||||||||||| |||||| |||||||| ||||| |||  ||||||||||||||||||||||| |||||||||    
T  35105906 ttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaagagagtgtaaggctgcgtacaatacaccagaatggtggg 35106005  T
Q  98 accccttcc 106  Q
    ||| |||||    
T  35106006 acctcttcc 35106014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 12625872 - 12626026
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa---cagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    |||||||| |||||||   |||| ||||| ||||||||| |||||| |||||||| |||||   ||| ||||| |||| |||||||||||||||||||||    
T  12625872 ttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggtaagactgcatacaatacaccaaatggtggg 12625971  T
Q  98 accccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||| ||||  || |||| ||||| |||||| |||| ||||| |||||||||||    
T  12625972 accccctcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 12626026  T

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Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 152
Target Start/End: Original strand, 19729365 - 19729476
Alignment:
Q  41 gaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccg 140  Q
    ||||||| ||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||  || |||||||| | ||||||||||| ||| |    
T  19729365 gaaacagtctcttatgtaaaacagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcatatacgggagctctagtgcactg 19729464  T
Q  141 agttgccctttt 152  Q
      ||||||||||    
T  19729465 gattgccctttt 19729476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 44781658 - 44781521
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaa--acagagtaaggctgcgtacaatacacc--aaatggtgg 96  Q
    ||||||||| ||||||||||| | ||||||||||||||| |||||| |||||||| ||||  |||| ||||||||| ||||||||||||  ||||| |||    
T  44781658 ttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaaggctgtgtacaatacaccaaaaatgttgg 44781559  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagt 134  Q
    |||||| ||||| || |||| ||||| |||||| ||||    
T  44781558 gaccccgtcccagaccctgcgtatgcgggagctttagt 44781521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 23000365 - 23000263
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggacccc 102  Q
    |||||||||||||||||||| ||||||  ||||||| ||||||||||||||| ||||| ||  |||||| | | ||||||||||||||||||||||||||    
T  23000365 ttgtcatgtgactgaaaggtcacgggt--aagtcctggaaacagcctcttgtgtaaaaacacggtaaggttccatacaatacaccaaatggtgggacccc 23000268  T
Q  103 ttccc 107  Q
    |||||    
T  23000267 ttccc 23000263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 42083851 - 42083742
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaaca--gagtaaggctgcgtacaatacacc-aaatggtggg 97  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||| ||||| |  | | ||||||||||||| || ||| ||||||||||    
T  42083851 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaaggctgcgtacagtataccaaaatggtggg 42083752  T
Q  98 accccttccc 107  Q
    ||||||||||    
T  42083751 accccttccc 42083742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 8484064 - 8483960
Alignment:
Q  27 gggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcag 124  Q
    ||||||||||||| |||||| |||||||| |||||  ||| | |||||||||||||||||||||| |||||||||||| ||||| || |||| ||||| |    
T  8484064 gggttcaagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcgtacaatacaccaattggtgggaccccatcccagaccctgcgtatgcgg 8483965  T
Q  125 gagct 129  Q
    |||||    
T  8483964 gagct 8483960  T

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Target: chr8; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 26102578 - 26102655
Alignment:
Q  77 tacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||||||||||||||||||||||||||  || |||| ||||| ||||||||||| ||||| |||||||||||||    
T  26102578 tacaatacaccaaatggtgggaccccttcccggaccctgcttatgcgggagctctagtgcaccgggttgccctttttt 26102655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 20869960 - 20870063
Alignment:
Q  53 tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    |||| ||||||| |||||||||||||||||||||||  ||||||||||||||||||   || | |||||||| |||||| |||| ||||| |||||||||    
T  20869960 tgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggagctttagtgcaccgggttgccctt 20870059  T
Q  151 tttt 154  Q
    ||||    
T  20870060 tttt 20870063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 29877111 - 29877206
Alignment:
Q  35 gtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagc 128  Q
    ||||| |||||||||| |||| |||||  ||| ||||||||||||||||||||||||||||||||||||||||||  || |||| ||||| |||||    
T  29877111 gtcctggaaacagccttttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagc 29877206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22598140 - 22598248
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||||  |||||||||||| |||||||||| |||| |||||| |||||  |||| ||||||| ||||||||  |||||||||||||| ||||| ||    
T  22598140 ttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaatacaccaattggtgaga 22598239  T
Q  99 ccccttccc 107  Q
    ||| |||||    
T  22598240 ccctttccc 22598248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 23286432 - 23286375
Alignment:
Q  44 acagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccc 101  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  23286432 acagcctcttgtgtaaaacagggtaaagctgcgtacaatacaccaaatggtgggaccc 23286375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 140
Target Start/End: Original strand, 5689640 - 5689755
Alignment:
Q  27 gggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcag 124  Q
    ||||||||||| |  ||| |||||||||| |||||  ||| ||||||||||||||||||||||||||||||| |||||||||| |||  ||| ||||  |    
T  5689640 gggttcaagtcttgtaaatagcctcttgtgtaaaaagcagggtaaggctgcgtacaatacaccaaatggtggaaccccttcccgaaccatgcgtatgtgg 5689739  T
Q  125 gagctctagtacaccg 140  Q
    ||||| |||| |||||    
T  5689740 gagctttagtgcaccg 5689755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 11748282 - 11748408
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctc--ttgtataaaacagagtaaggctgcgtaca--atacaccaaatggtgg 96  Q
    |||||||||||||||||||| || ||||||||||||| | |||||||||||  ||||| ||| ||| ||||| | |||||||  |||||  ||||||| |    
T  11748282 ttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggtaagacagcgtacaatatacaaaaaatggtag 11748381  T
Q  97 gaccccttcccaaactctgcatatgca 123  Q
    ||||||||||| ||  |||||||||||    
T  11748382 gaccccttcccgaatcctgcatatgca 11748408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28407399 - 28407459
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| |||||    
T  28407399 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 28407459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 389642 - 389733
Alignment:
Q  17 gaaaggttacgggttcaagtcctagaaacagcctcttgtat----aaaacagagtaaggctgcgtacaatacaccaaatggtgggacccctt 104  Q
    ||||||| ||||||||||||||| |||||| |||||||| |    ||||||| |||||| |||||||||||||||||||| ||||| |||||    
T  389642 gaaaggtcacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggtaaggttgcgtacaatacaccaaatgatgggatccctt 389733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 10857871 - 10857966
Alignment:
Q  58 aaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    ||||||| ||||||||||| |||||||||||| |||||||||| |||||   ||  ||| ||||| |||||| |||| ||||| ||||||||||||    
T  10857871 aaaacagggtaaggctgcgcacaatacaccaattggtgggaccacttcctggaccttgcgtatgcgggagctttagtgcaccgggttgcccttttt 10857966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 17251001 - 17250892
Alignment:
Q  29 gttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaa--atggtgggaccccttcccaaactctgcatatgcag 124  Q
    ||||||||||| ||| ||||||||||| ||||| | ||  |||||| ||||||||||||||||  |||||||||||| ||||| ||| |||| |||| ||    
T  17251001 gttcaagtcctggaagcagcctcttgtgtaaaaaacaggttaaggcagcgtacaatacaccaataatggtgggaccctttcccgaaccctgcgtatgaag 17250902  T
Q  125 gagctctagt 134  Q
    ||||| ||||    
T  17250901 gagctttagt 17250892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 43942366 - 43942424
Alignment:
Q  58 aaaacagagtaaggctgcgtacaatacacc--aaatggtgggaccccttcccaaactct 114  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  43942366 aaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagactct 43942424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 11001033 - 11000971
Alignment:
Q  67 taaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagct 129  Q
    |||||||| |||||||||||||||||||||||||||| ||| ||| |||  ||||||||||||    
T  11001033 taaggctgtgtacaatacaccaaatggtgggacccctacccgaaccctgtttatgcaggagct 11000971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 14018121 - 14018013
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaa-tggtggg 97  Q
    ||||||||| |||| |||||||| | ||||||||||| | ||||||| ||||  |||| ||||||| || || ||||||||||||||| ||| |||||||    
T  14018121 ttgttgtcacgtgattgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaaacagggtgagactgcgtacaatacactaaattggtggg 14018022  T
Q  98 accccttcc 106  Q
    ||| |||||    
T  14018021 accacttcc 14018013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 151
Target Start/End: Original strand, 16225056 - 16225156
Alignment:
Q  53 tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    |||| ||||||| ||||| |||||||||||||||||  |||||||||| ||||||||  || | |||||||| |||||| |||| ||||| |||| ||||    
T  16225056 tgtaaaaaacagggtaagactgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagctttagtgcaccgggttgtcctt 16225155  T
Q  151 t 151  Q
    |    
T  16225156 t 16225156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 44742617 - 44742564
Alignment:
Q  53 tgtataaaacagagtaaggctgcgtacaatacacc-aaatggtgggaccccttc 105  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  44742617 tgtaaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttc 44742564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24245434 - 24245478
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaac 45  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  24245434 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30962925 - 30962865
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    |||||||||||||| |||||||| |||  |||||||||| ||||||||||||||| |||||    
T  30962925 ttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaa 30962865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 26457779 - 26457816
Alignment:
Q  66 gtaaggctgcgtacaatacaccaaatggtgggacccct 103  Q
    |||||||||||||||||||||||| |||||||||||||    
T  26457779 gtaaggctgcgtacaatacaccaattggtgggacccct 26457816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 16013511 - 16013593
Alignment:
Q  73 tgcgtacaatacaccaaa--tggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||||||||| |||  ||||| |||||||||||| || |||| ||||| |||||| |||| ||||| |||| |||||||    
T  16013511 tgcgtacaatacactaaaaatggtgcgaccccttcccagaccctgcctatgcgggagctttagtgcaccgggttgtccttttt 16013593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 36918161 - 36918219
Alignment:
Q  53 tgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaac 111  Q
    |||| ||||||| ||||||||| |||||||||||||||| || |||  |||||||||||    
T  36918161 tgtaaaaaacagggtaaggctgtgtacaatacaccaaatagtaggattccttcccaaac 36918219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 40605057 - 40604905
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||||||||| || | | ||| ||||||||||| | ||||||  || |||| ||||| |  |  ||||| |||||||||||||| ||||| | |||    
T  40605057 ttgttgtcatgtgattggatgattatgggttcaagtcatggaaacaatcttttgtgtaaaaaattggataaggttgcgtacaatacactaaatgat-gga 40604959  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
     ||||||| |||| || | ||||| |||||| |||| |||||| ||||||||||    
T  40604958 tcccttccgaaaccctacgtatgcgggagctttagtgcaccgaattgccctttt 40604905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 42391250 - 42391097
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  42391250 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 42391151  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||  || |||||||||| ||||||||||| ||||| |||||||||||||    
T  42391150 ccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 42391097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 21172159 - 21172008
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  21172159 ttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 21172060  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||  || |||||||||| ||||||||||| ||||| |||||||||||    
T  21172059 ccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 21172008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 32758244 - 32758403
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||    
T  32758244 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaacagggtaaggctgtgtacaatacaccaaatggtgggacc 32758343  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttttattata 160  Q
    |||||||  || |||||||||| ||||||||||| ||||| ||||||||||||| |||||    
T  32758344 ccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttttttata 32758403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10693223 - 10693073
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  10693223 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaagagggtaaggctgcgtacaatacaccaaatggtgggacc 10693124  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||  || |||||||||| ||||||||||| ||| | ||||||||||    
T  10693123 ccttcccggaccctgcatatgcgggagctctagtgcactgggttgcccttt 10693073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 48735273 - 48735122
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctag-aaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||||| |||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  48735273 ttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgtaaaacacggtaaggctgcgtacaatacaccaaatggtgggac 48735174  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||||||  || |||||||||| ||||||||||| ||||| ||||||||||    
T  48735173 cccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 48735122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 47078005 - 47077852
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||| ||||| ||||||| | |||||||||||||| |||||||||||||    
T  47078005 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaatagagtaaagttgcgtacaatacacaaaatggtgggacc 47077906  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||||| || ||||||| ||||||||||| |||||  ||||| ||||||    
T  47077905 ccttcccaaaccctacatatgcgggagctctagtgcaccggattgccttttttt 47077852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 42476856 - 42477005
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||||||||||||| |||||| |||| ||||||| || ||||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  42476856 ttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgtaaaacaaggtaaggctgcgtacaatacaccaaatggtgggacc 42476955  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    |||||| |  |||||||||||| ||||||||||| ||||  |||||||||    
T  42476956 ccttcctaggctctgcatatgcgggagctctagtgcaccaggttgccctt 42477005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 11741778 - 11741927
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| | |||||||||||||  ||||||| ||| || ||||| || ||||||||||||||||||||||||||||||||| |    
T  11741778 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgtaaaatagggtaaggctgcgtacaatacaccaaatggtgggatc 11741877  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    |||||||  | |||||| |||| ||||||||||| ||||| |||||||||    
T  11741878 ccttcccggattctgcacatgcgggagctctagtgcaccgggttgccctt 11741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 31591245 - 31591108
Alignment:
Q  15 ctgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactct 114  Q
    ||||||||| ||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||  ||  |    
T  31591245 ctgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaacagagtaaggctgcgtacaatacaataaatggtgggaccccttcccggacctt 31591146  T
Q  115 gcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||| ||||||||||| ||||| |||||||||||    
T  31591145 gcatatgcgggagctctagtgcaccgggttgccctttt 31591108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 43557455 - 43557613
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||||||||||  |||| |||||||||||||||||||||||||||||||  ||||||||    
T  43557455 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgg 43557554  T
Q  97 gaccccttcccaaactctgcatatgcaggagc-tctagtacaccgagttgccctttttt 154  Q
    |||||| ||||  ||||||| ||||| ||||| | |||| ||||| |||||||||||||    
T  43557555 gaccccctcccggactctgcgtatgcgggagcttttagtgcaccgggttgccctttttt 43557613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 42805507 - 42805663
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||  |||| ||||||| ||||||||| |||||||||||||  ||||||||    
T  42805507 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgg 42805606  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||||||  || | |||||||| |||||| |||| ||||| ||||||||||||    
T  42805607 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 42805663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 11617740 - 11617589
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||||||||| || |||||||||||| |||||| |||||||| |||||  ||| ||||| |||||||||||||||||||||||||||    
T  11617740 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtggga 11617641  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    ||||||||   || |||| ||||||||| || |||| ||||| |||||||||    
T  11617640 ccccttcctggaccctgcgtatgcaggacctttagtgcaccgggttgccctt 11617589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 40463860 - 40464012
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||||| ||||| | | ||||||||||||| ||||||||||||||||||||    
T  40463860 ttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgtaaaaactgggtaaggctgcgtataatacaccaaatggtgggac 40463959  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||| |  || |||| ||||| ||||||  ||| |||||||||||||||||    
T  40463960 cccttctcggaccctgcgtatgcgggagcttcagtgcaccgagttgccctttt 40464012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 42798652 - 42798806
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||||| ||||| | |  |||||||||||||||||||||||||||||||||    
T  42798652 ttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaaatggtggga 42798751  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    ||| |||||  || |||||||||| |||||| |||| || || ||||||||||||    
T  42798752 ccctttcccggaccctgcatatgcgggagctatagtgcatcgggttgcccttttt 42798806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 2541172 - 2541019
Alignment:
Q  1 ttgttgtcatgtgactg-aaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||| |||||  ||| |||||||||||||| |||||||||||||||||    
T  2541172 ttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtactatacaccaaatggtggg 2541073  T
Q  98 accccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||||||||   | |||| ||||| |||||| |||| ||||| ||| ||||||    
T  2541072 accccttcccggtccctgcgtatgcgggagctttagtgcaccgggtttcccttt 2541019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 33872061 - 33871953
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    |||||||||||||||||||||||  |||||||||||||| |||||| |||||||| ||||| |||  |||||||||||||||||||||||||||||||||    
T  33872061 ttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaacaggataaggctgcgtacaatacaccaaatggtgggac 33871962  T
Q  100 cccttccca 108  Q
    |||||||||    
T  33871961 cccttccca 33871953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 35334966 - 35334818
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||| ||||| ||| ||||||||||| ||||||| ||| |||| ||||||| ||||| ||| |||||||||||| ||||||||||||    
T  35334966 ttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacagtctcgtgtaaaaaacagggtaagactgtgtacaatacaccgaatggtgggacc 35334867  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccct 149  Q
    |||||||  || |||| |||||||||||| |||| ||||| ||| ||||    
T  35334866 ccttcccggaccctgcgtatgcaggagctttagtgcaccgggtttccct 35334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 47716442 - 47716596
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    |||||| |||||||||| ||||| ||||||||||||||| ||||||||||||  |||| ||||||| |||||||||||||||||||||||  ||||||||    
T  47716442 ttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgg 47716541  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||||||  || | |||||||| |||||| | || ||||| ||||||||||    
T  47716542 gaccccttcccggaccccgcatatgcgggagctttggtgcaccgggttgcccttt 47716596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 27629617 - 27629771
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||||| |||| ||||||| ||||||||||||||| ||||||||||||||| |||||  ||| |||||| |||||| |||||||||||||||||||    
T  27629617 ttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtaaaatacaccaaatggtggga 27629716  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||||   | |||||||||| | ||||  ||| ||||| ||||||||||||    
T  27629717 ccccttcccgggccctgcatatgcggtagcttcagtgcaccgggttgcccttttt 27629771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 19427041 - 19426887
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||  |||| |||| || ||||| |||||||||||||||||||||||||||    
T  19427041 ttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgtacaatacaccaaatggtggga 19426942  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
     |||||| |  || ||||||||||  |||||  ||| ||||| |||||||||||||    
T  19426941 -cccttctcggaccctgcatatgcgagagcttcagtgcaccgggttgccctttttt 19426887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 28362297 - 28362175
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||| ||||||||| || |||||||||||||||||| ||||||||| ||||| |    |||||||||||||||||||||||||||||||||    
T  28362297 ttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaaggctgcgtacaatacaccaaatggtggga 28362198  T
Q  99 ccccttcccaaactctgcatatg 121  Q
    |||||||||| ||  ||||||||    
T  28362197 ccccttcccagaccttgcatatg 28362175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 13805085 - 13805191
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaaca-gagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| ||||||| || ||||||| | ||||||||| ||||||||||||||||||||||||    
T  13805085 ttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgtaaaacaggggtaaggctgtgtacaatacaccaaatggtgggac 13805184  T
Q  100 cccttcc 106  Q
    | |||||    
T  13805185 cacttcc 13805191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 19265798 - 19265951
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaac-agagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||| ||||||||||||| ||||||||||||| | || |||||| ||||| |||||  || ||||||||||||||||||||||||||||||||||    
T  19265798 ttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaaaaagagggtaaggctgcgtacaatacaccaaatggtgggac 19265897  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||  || || ||||||  |||||| |||| ||||| | |||||||||||    
T  19265898 cccttcccggac-ctacatatgtgggagctttagtgcaccgggctgccctttttt 19265951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 28078283 - 28078161
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt-ataaaacagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||| ||| ||| | ||||||| |||||| ||| | |||||||||||||||||||||    
T  28078283 ttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagtctcgtgtaaaaaaacagggtaaggttgcatgcaatacaccaaatggtgggac 28078184  T
Q  100 cccttcccaaactctgcatatgc 122  Q
    |||||||| ||  ||||||||||    
T  28078183 cccttcccgaatcctgcatatgc 28078161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 34626359 - 34626205
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    |||||||||||||| |||||||  || | |||||||||| ||||||||||| ||| ||||| ||| |||||||||||| ||||||||||||||||||||     
T  34626359 ttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgtaaaaacagggtaaggctgcgttcaatacaccaaatggtgggat 34626260  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||  || |||| ||||| |||||| |||| || || |||||||||||||    
T  34626259 cccttcccggaccctgcgtatgcgggagctttagttcatcgggttgccctttttt 34626205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 29907408 - 29907552
Alignment:
Q  7 tcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc-aaatggtgggacccct 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||  |||| |||| || |||||||||||| ||||||||| |||||||||||||||     
T  29907408 tcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggctgcgttcaatacaccaaaatggtgggacccca 29907507  T
Q  104 tcccaaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    ||||  || |||  ||||| |||||| |||| ||||| |||||||||    
T  29907508 tcccggaccctg--tatgcgggagctttagtgcaccgggttgccctt 29907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 7879639 - 7879776
Alignment:
Q  19 aaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgc 116  Q
    ||||| ||||||||||||||| ||||||  ||||||| ||||| | |  ||||||||||||||||||||||||||||||||||||||||||  || ||||    
T  7879639 aaggtcacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgc 7879738  T
Q  117 atatgcaggagctctagtacaccgagttgccctttttt 154  Q
     ||||| ||||||  ||| ||||| |||||||||||||    
T  7879739 gtatgcgggagcttcagtgcaccgggttgccctttttt 7879776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 32233286 - 32233132
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    |||||||||  |||||||||||| | ||||||||||||| |||||| |||||||| ||||| ||| ||||||| ||||| | |||||||||||||||||     
T  32233286 ttgttgtcacctgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaacagggtaaggcagcgtatattacaccaaatggtgggat 32233187  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
     ||||||||||| |||||||||  ||||||  ||| ||||| | |||||||||||    
T  32233186 tccttcccaaaccctgcatatgagggagcttcagtgcaccgggctgccctttttt 32233132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 2663058 - 2662954
Alignment:
Q  28 ggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggag 127  Q
    |||||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||  || || |||||||||| ||||    
T  2663058 ggttcaagtcctggaaacagcctcttgtgtaaaatagggtaaggctgcgtacaatacaccaaatggtggga-cccttttcagaccctgcatatgcgggag 2662960  T
Q  128 ctctag 133  Q
    ||||||    
T  2662959 ctctag 2662954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14099158 - 14099030
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||||||||| | ||||| ||||||| |||| ||||| |||| ||||| | ||  |||| |||||||||||||||||||||||||||    
T  14099158 ttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatacaccaaatggtggga 14099059  T
Q  99 ccccttcccaaactctgcatatgcaggag 127  Q
    ||||||||| ||| || | ||||||||||    
T  14099058 ccccttcccgaaccctacgtatgcaggag 14099030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14409175 - 14409047
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||||||||| | ||||| ||||||| |||| ||||| |||| ||||| | ||  |||| |||||||||||||||||||||||||||    
T  14409175 ttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatacaccaaatggtggga 14409076  T
Q  99 ccccttcccaaactctgcatatgcaggag 127  Q
    ||||||||| ||| || | ||||||||||    
T  14409075 ccccttcccgaaccctacgtatgcaggag 14409047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 23419822 - 23419719
Alignment:
Q  5 tgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggacccc 102  Q
    |||||||||||| |||||| || ||||||||| || ||||||||||||||| |||||  ||| ||||| |||||||||||||||||||||||||||||||    
T  23419822 tgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggacccc 23419723  T
Q  103 ttcc 106  Q
    ||||    
T  23419722 ttcc 23419719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 38262340 - 38262193
Alignment:
Q  9 atgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaatggtgggaccccttcc 106  Q
    ||||||||| ||||| ||||||||||||||| ||||||| ||||||| ||||| | |  |||| | ||| |||||||||||||||| |||||||||||||    
T  38262340 atgtgactggaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaatatggtaatgttgcatacaatacaccaaatgatgggaccccttcc 38262241  T
Q  107 caaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    | ||| |||| ||||| |||||| |||| |||||  ||||||||||||    
T  38262240 cgaacactgcgtatgcgggagctttagtgcaccggattgccctttttt 38262193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 46354177 - 46354287
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    |||||||||||||| || ||||| ||||||||||||||| |||||| |||||  |||| ||||||| |||||||||||||||||||||||  ||||||||    
T  46354177 ttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgg 46354276  T
Q  97 gaccccttccc 107  Q
    |||||||||||    
T  46354277 gaccccttccc 46354287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 150
Target Start/End: Original strand, 18747472 - 18747621
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa---cagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||| ||||||||||||| ||||| ||||||| | |||||||||| |||| |||||   ||| ||||||||||||| |||||||||| ||||||||||    
T  18747472 ttgtcacgtgactgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggtaaggctgcgtataatacaccaattggtgggacc 18747571  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    ||||||  ||| |||| ||||| |||||| |||| ||||| | |||||||    
T  18747572 ccttcctgaaccctgcgtatgcgggagctttagtgcaccgggctgccctt 18747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 19266433 - 19266563
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttg--tataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||||||||||||||||||   |||||||||||||  ||| |||| ||||  || ||||||| |||||||||||||||||||||||||| ||||||    
T  19266433 ttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaattgtggga 19266532  T
Q  99 ccccttcccaaactctgcatatgcaggagct 129  Q
     ||||||||  || |||| ||||| ||||||    
T  19266533 tcccttcccggaccctgcgtatgcgggagct 19266563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 27889399 - 27889312
Alignment:
Q  68 aaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    ||||||||||||||||||||||||||||||||||||||||  || |||| ||||| |||||| | |||||||| ||||||||||||||    
T  27889399 aaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttggtacaccgggttgccctttttta 27889312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 22699122 - 22699018
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc--aaatggtgg 96  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| || ||||  |||| ||||||| ||||| ||||||||||||||||  |||||||||    
T  22699122 ttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaaaatggtgg 22699023  T
Q  97 gaccc 101  Q
    |||||    
T  22699022 gaccc 22699018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 48123636 - 48123531
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataa--aacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||| ||||||| ||||||||| | ||||||||||||| ||||||||||||||| |||  ||||| ||||  |||| ||||||||||||||||||||||    
T  48123636 ttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaaaactgcatacaatacaccaaatggtggga 48123537  T
Q  99 cccctt 104  Q
    ||||||    
T  48123536 cccctt 48123531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 18512588 - 18512475
Alignment:
Q  17 gaaaggttacgggttcaagtcctagaaacagcctcttgtataaaac-agagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctg 115  Q
    ||||||| ||||||||||||||| |||||| | |||||| |||||  || |||||||||||||||||||||| |||||||||||||||||||  || |||    
T  18512588 gaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacaccgaatggtgggaccccttcccggaccctg 18512489  T
Q  116 catatgcaggagct 129  Q
    | ||||| ||||||    
T  18512488 cgtatgcgggagct 18512475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6736873 - 6736969
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgg 96  Q
    ||||||||||| ||||||||||| |||||||||||||||  ||||| |||||||||| ||||||  ||||| |||| ||||||||||||||||||||    
T  6736873 ttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataaaaacaaggtaagactgcatacaatacaccaaatggtgg 6736969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7644939 - 7645047
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc-aaatggtggg 97  Q
    ||||||| | ||||||||||||| ||||||||||||||| ||||||||||||  |||| ||||||| |||||   |||||||||||||| |||| |||||    
T  7644939 ttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagatagcgtacaatacaccaaaattgtggg 7645038  T
Q  98 accccttcc 106  Q
    |||||||||    
T  7645039 accccttcc 7645047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 8149098 - 8148988
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat---aaaacagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||||||||||||||| || || ||| |||||||||||  ||||  |||||||| |   |||| || |||||| |||||||||||||||||||||||||    
T  8149098 ttgttgtcatgtgactgcaaagtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaaggttgcgtacaatacaccaaatggtggg 8148999  T
Q  98 accccttccca 108  Q
    |||||||||||    
T  8148998 accccttccca 8148988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 21566445 - 21566560
Alignment:
Q  28 ggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccaaactctgcatatgcag 124  Q
    |||||||||| | ||||| ||||||||| |||||  ||||| ||| ||||||||||||||||||| |||| |||||||||||| ||| |||||||||| |    
T  21566445 ggttcaagtcttggaaaccgcctcttgtgtaaaaaacagaggaagactgcgtacaatacaccaaaatggtaggaccccttcccgaaccctgcatatgcgg 21566544  T
Q  125 gagctctagtacaccg 140  Q
    ||||| |||| |||||    
T  21566545 gagctttagtgcaccg 21566560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42495987 - 42495927
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  42495987 ttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaa 42495927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 16341276 - 16341370
Alignment:
Q  16 tgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc-aaatggtgggaccccttccc 107  Q
    |||||||| |||||||||||| |||||||||||||||  |||| ||||||| |||||||| ||||||||||||| |||||||||| || ||||||    
T  16341276 tgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaaggctacgtacaatacaccaaaatggtgggccctcttccc 16341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 39123873 - 39124031
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagt----aaggctgcgtacaatacacc--aaatgg 93  Q
    |||||||||||||||||||| |  ||||||||||||||||||||| | ||||||| | ||||||| ||    ||||||||||| ||||||||  ||||||    
T  39123873 ttgttgtcatgtgactgaaacgacacgggttcaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 39123972  T
Q  94 tgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||||||||||||  || |||| ||||  |||||| | || |||| || |||||||||    
T  39123973 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccaagctgccctttt 39124031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 14732974 - 14732832
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcct--cttgtataaaacagagtaaggctgcgtacaatacacc--aaatggtgg 96  Q
    |||||||||||||||||||| || | ||||||||||||| ||||||||||  | |||| ||||||| |||||||||||| |||||||||  ||||||||     
T  14732974 ttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggtaaggctgcgt-caatacaccaaaaatggtga 14732876  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccg 140  Q
     || ||||||| ||| |||  ||||| |||||| |||| |||||    
T  14732875 aactccttcccgaaccctgtttatgcgggagctttagtgcaccg 14732832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 38604550 - 38604639
Alignment:
Q  41 gaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagct 129  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||||||| ||  || |||| ||||| ||||||    
T  38604550 gaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgagacccctttccggaccctgcgtatgcgggagct 38604639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 23231573 - 23231692
Alignment:
Q  34 agtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctct 131  Q
    |||||| |||| |||||||||| ||||| | |  ||||||||||||| |||||||| |||| |||||||||||||| ||| |||| ||||| | |||| |    
T  23231573 agtcctggaaagagcctcttgtgtaaaatataaggtaaggctgcgtataatacaccgaatgatgggaccccttcccgaaccctgcgtatgcggcagcttt 23231672  T
Q  132 agtacaccgagttgcccttt 151  Q
    ||| ||||||||| ||||||    
T  23231673 agtgcaccgagtttcccttt 23231692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 23619075 - 23618975
Alignment:
Q  53 tgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||||||||||||||||  || |||||||||| ||||||||||||||||||| || ||  ||| | |||||||||| |||| || || |||||||||||    
T  23619075 tgtataaaacagagtaagcttgtgtacaatacatcaaatggtgggaccccttcgcagaccttgcgtttgcaggagctttagtgcagcgggttgccctttt 23618976  T
Q  153 t 153  Q
    |    
T  23618975 t 23618975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 1408469 - 1408595
Alignment:
Q  30 ttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggag 127  Q
    |||||||||| |||| |||||||||| ||||| | |  ||||||||| |||||||||| |||||||||||||||||||||  || |||| ||||||| |     
T  1408469 ttcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggctgtgtacaatacagcaaatggtgggaccccttcccggaccctgcgtatgcagaat 1408568  T
Q  128 ctctagtacaccgagttgccctttttt 154  Q
    || |||| |||||  ||||| ||||||    
T  1408569 ctttagttcaccggattgccttttttt 1408595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7193068 - 7193127
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaa 60  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| ||||    
T  7193068 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaa 7193127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 5180309 - 5180177
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacacc--aaatggtgg 96  Q
    ||||||||||||||||||||||| | |||||||| | || ||||||||||||||| |  ||||||| ||||| ||| |||||| |||||  ||||| | |    
T  5180309 ttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggtaagactgtgtacaacacaccaaaaatgattg 5180210  T
Q  97 gaccccttcccaaactctgcatatgcaggagct 129  Q
    |||||||| |||||  || | ||||||||||||    
T  5180209 gacccctttccaaatcctacgtatgcaggagct 5180177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 44123769 - 44123644
Alignment:
Q  5 tgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggacccct 103  Q
    ||||||||||||||||| |||||||||||||| || ||||||||||||||| | ||||||  |||||| ||| |  ||||||||| ||  |||||||| |    
T  44123769 tgtcatgtgactgaaagattacgggttcaagtactggaaacagcctcttgtgtaaaaacaaggtaaggttgcatgaaatacaccatataatgggacccgt 44123670  T
Q  104 tcccaaactctgcatatgcaggagct 129  Q
    || |  || |||| ||||||||||||    
T  44123669 tctcggacactgcgtatgcaggagct 44123644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 12473287 - 12473378
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacaccaaa 90  Q
    ||||||||||||  ||||||||| | |||||||||||||  ||||| |||||||| |  ||||||| |||||| ||||||||||||||||||    
T  12473287 ttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggtaaggatgcgtacaatacaccaaa 12473378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3469331 - 3469220
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt----ataaaacagagtaaggctgcgtacaatacacc--aaatggt 94  Q
    ||||||||||||||||||||||| || |  ||||||||||||||||  |||||||    | ||||||| ||| || |||||||||||||||  ||||||     
T  3469331 ttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaacattctcttgtgtaaaaaaaacagggtacggttgcgtacaatacaccaaaaatggc 3469232  T
Q  95 gggaccccttcc 106  Q
    ||||||||||||    
T  3469231 gggaccccttcc 3469220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18327017 - 18327091
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctg 74  Q
    ||||||||||||||||  ||||| ||||||||||||||  ||||||||||||||| | ||||||| |||||||||    
T  18327017 ttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgtaaaaacagggtaaggctg 18327091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 35787378 - 35787268
Alignment:
Q  43 aacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccga 141  Q
    ||||||||||||| ||||| ||  |||||| ||||||||||||||||||||| |||||||||||||  ||  ||| ||||| ||||||  | | |||||     
T  35787378 aacagcctcttgtgtaaaaacatggtaaggttgcgtacaatacaccaaatggcgggaccccttcccggaccttgcgtatgcgggagcttcaatgcaccgg 35787279  T
Q  142 gttgccctttt 152  Q
    |||||||||||    
T  35787278 gttgccctttt 35787268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 21139841 - 21139784
Alignment:
Q  58 aaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctg 115  Q
    |||||||||||||| ||  |||| |||||||||||||||||||||||||| |||||||    
T  21139841 aaaacagagtaaggttggatacagtacaccaaatggtgggaccccttcccgaactctg 21139784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7794658 - 7794606
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctctt 53  Q
    ||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||    
T  7794658 ttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctctt 7794606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 15108520 - 15108437
Alignment:
Q  29 gttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaac 111  Q
    ||||||||||| |||||||  |||||| ||||| ||  ||||||||| |||||||||| ||||| |||||| ||||||||||||    
T  15108520 gttcaagtcctggaaacagtttcttgtgtaaaaacaaggtaaggctgtgtacaatacatcaaatagtgggatcccttcccaaac 15108437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 35203437 - 35203554
Alignment:
Q  16 tgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc--aaatggtgggaccccttcccaaac 111  Q
    |||||||| ||||||||||||||| ||||||  ||||  |||| |||||||  |||| |||||||||||| |||  ||||||||||| |||||||  |||    
T  35203437 tgaaaggtcacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggataagactgcgtacaatataccaaaaatggtgggatcccttcctgaac 35203536  T
Q  112 tctgcatatgcaggagct 129  Q
    ||| | ||||| ||||||    
T  35203537 tctacgtatgcgggagct 35203554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 13792257 - 13792148
Alignment:
Q  45 cagcctcttgtataaaacagagtaaggctgcgtacaatacacc-aaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagt 143  Q
    ||||||| |||| |||||   ||||| |||| ||||||||||| |||||| ||||||||||| | ||| |||| ||||| |||||| | || |||||||     
T  13792257 cagcctcgtgtaaaaaacttggtaagactgcatacaatacacccaaatggcgggaccccttctcgaaccctgcgtatgctggagcttttgtgcaccgagc 13792158  T
Q  144 tgcccttttt 153  Q
    ||||||||||    
T  13792157 tgcccttttt 13792148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 42102037 - 42101928
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctctt--gtataaaacagagtaaggctgcgtacaatacaccaaa-tggtggg 97  Q
    ||||||||| ||||||| ||||| |   ||||||||||| |||||||||||||  ||| ||||||| ||||  ||||||||| ||| | ||| |||||||    
T  42102037 ttgttgtcacgtgactggaaggtcaaaagttcaagtcctggaaacagcctcttccgtaaaaaacagggtaacactgcgtacagtactctaaagtggtggg 42101938  T
Q  98 accccttccc 107  Q
    |||| |||||    
T  42101937 accctttccc 42101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 36267900 - 36267868
Alignment:
Q  69 aggctgcgtacaatacaccaaatggtgggaccc 101  Q
    |||||||||||||||||||||||||| ||||||    
T  36267900 aggctgcgtacaatacaccaaatggttggaccc 36267868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 39093532 - 39093437
Alignment:
Q  59 aaacagagtaaggctgcgtacaatacacca-aatggtgggaccccttccca-aactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||| ||||| ||| ||||||||||||| ||| |||||| ||||||||  |||| ||||||||||| |||| |||| ||||| | ||||||||||    
T  39093532 aaacagggtaagactgtgtacaatacaccataatagtgggaacccttcccggaact-tgcatatgcagaagctttagtgcaccgggctgcccttttt 39093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 45811919 - 45811986
Alignment:
Q  88 aaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttttat 156  Q
    ||||||||||| ||||| ||| || |||| |||||||||||| |||| || || |||||||||||||||    
T  45811919 aaatggtgggatccctttccagaccctgcttatgcaggagctttagtgca-cgggttgcccttttttat 45811986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 1346947 - 1347100
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  1346947 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 1347046  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||  || |||||||||| ||||||||||| ||||| |||||||||||||    
T  1347047 ccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 1347100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 1354907 - 1354756
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  1354907 ttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 1354808  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||  || |||||||||| ||||||||||| ||||| |||||||||||    
T  1354807 ccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 1354756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 29356009 - 29355853
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtata--aaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||  |||||| |||||||||||||||||||||||  ||||||||    
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgg 29355910  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||||||  || |||| ||||| |||||| |||| ||||| ||||||||||||    
T  29355909 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 29355853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9161106 - 9161271
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacacca--aatggtggg 97  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| ||  |||||||||    
T  9161106 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacagagtaaggctgcgtacaatacatcaataatggtggg 9161205  T
Q  98 accccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttttattatatata 164  Q
    |||||||| |  || |||| ||||| | |||| |||| ||||  ||||||||||||| |||||||||    
T  9161206 accccttctcggaccctgcgtatgcggaagctttagtgcaccaggttgccctttttt-ttatatata 9161271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 12222069 - 12221913
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||||||||  |||| ||||||| |||||||||||||||||||||||  ||||||||    
T  12222069 ttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgg 12221970  T
Q  97 gaccccttcccaaactctgcatatgcaggagc-tctagtacaccgagttgccctttt 152  Q
    |||||||||||  || |||| ||||| ||||| | |||| ||||| |||||||||||    
T  12221969 gaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttt 12221913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 26097178 - 26097295
Alignment:
Q  36 tcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagta 135  Q
    |||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||  |||||||||||||  || |||||||||| |||||||||||     
T  26097178 tcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatgaagggaccccttcccggaccctgcatatgcgggagctctagtg 26097277  T
Q  136 caccgagttgcccttttt 153  Q
    ||||| ||||||||||||    
T  26097278 caccgggttgcccttttt 26097295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 25557743 - 25557860
Alignment:
Q  36 tcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagta 135  Q
    |||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||  || ||||||||||  || |||||||||| |||||||||||     
T  25557743 tcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatgaaggaaccccttcccggaccctgcatatgcgggagctctagtg 25557842  T
Q  136 caccgagttgcccttttt 153  Q
    ||||| ||||||||||||    
T  25557843 caccgggttgcccttttt 25557860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 28007609 - 28007749
Alignment:
Q  1 ttgttgtcatgtgac-tgaaa-ggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||| ||||| ||| ||||||||||||||| |||| |||||||||| |||||||| || |||||||||||||||||||||||| |||||    
T  28007609 ttgttgtcatgtgacatgaaaaggtcacgggttcaagtcctggaaagagcctcttgtgtaaaacagggtcaggctgcgtacaatacaccaaatgctggga 28007708  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccg 140  Q
    ||||||||| ||| || ||||||| | ||||||||| |||||    
T  28007709 ccccttccctaac-ctccatatgcggaagctctagtgcaccg 28007749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 2166564 - 2166406
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaa--acagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||| |||||||| ||||  ||||  ||||| ||||||||||||||||  ||||||||    
T  2166564 ttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataatggtgg 2166465  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    |||||||||||  || ||  |||| | |||||| |||| ||||| ||||||||||||||    
T  2166464 gaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttttta 2166406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 2178197 - 2178039
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaa--acagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||| |||||||| ||||  ||||  ||||| ||||||||||||||||  ||||||||    
T  2178197 ttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataatggtgg 2178098  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    |||||||||||  || ||  |||| | |||||| |||| ||||| ||||||||||||||    
T  2178097 gaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttttta 2178039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 23240971 - 23240870
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacccct 103  Q
    |||||| ||||||||||||| || ||| |||||||| ||||||||||||||| |||||||| |||||  ||||||||||| ||||| |||||||||||||    
T  23240971 ttgtcacgtgactgaaaggtcacaggtgcaagtcctggaaacagcctcttgtgtaaaacagggtaagtttgcgtacaatataccaattggtgggacccct 23240872  T
Q  104 tc 105  Q
    ||    
T  23240871 tc 23240870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 32579436 - 32579545
Alignment:
Q  28 ggttcaagtcctagaaacagcctcttgtataaaac-agagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcagga 126  Q
    |||||||||||| |||||||||||| ||||||||  |  ||||| ||||||||||||| ||||||||||||||||||||||| || |||||||||| |||    
T  32579436 ggttcaagtcctggaaacagcctctggtataaaaatacggtaagcctgcgtacaataccccaaatggtgggaccccttcccagaccctgcatatgcggga 32579535  T
Q  127 gctctagtac 136  Q
    ||| ||||||    
T  32579536 gctttagtac 32579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 33138840 - 33138918
Alignment:
Q  25 acgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggaccc 101  Q
    ||||||||||||||| |||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||    
T  33138840 acgggttcaagtcctggaaacaacctcttgtataaaaaacagagtaaggccgcgtacaatacaccaaatggtgggaccc 33138918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3815229 - 3815088
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||| || |||| ||||| | |  ||| | |||||||||||||||||||||||||||    
T  3815229 ttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaaatatggtacgactgcgtacaatacaccaaatggtggga 3815130  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccg 140  Q
    ||| ||||| ||| || | ||||| | |||| |||| |||||    
T  3815129 ccctttcccgaaccctacgtatgcggaagctttagtgcaccg 3815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 18277343 - 18277190
Alignment:
Q  3 gttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||| ||||||| |||||| |||||||||| || | ||||||||||||||| |||||  ||| |||||| || |||||  ||||||||||||||||||    
T  18277343 gttgtcctgtgactaaaaggtcacgggttcaaatcttggaaacagcctcttgtgtaaaaatcagggtaaggttgagtacagaacaccaaatggtgggacc 18277244  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||| | ||||| | ||||| |||||| || | ||||| |||| ||||||||    
T  18277243 ccttcctagactctacgtatgcgggagctttactgcaccgggttgtcctttttt 18277190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 15866189 - 15866041
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctctt--gtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||| ||||||| |||||||| | |||||||| |||| |||||||||||||  ||| ||||||| |||| ||||||||  ||||||||||||||||||    
T  15866189 ttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctcttaagtaaaaaacagggtaaagctgcgta--atacaccaaatggtggga 15866092  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccct 149  Q
    |||||||||  || |||| | ||| ||| || |||| ||| ||||||||||    
T  15866091 ccccttcccggaccctgcgtttgcgggatctatagtgcactgagttgccct 15866041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 8409226 - 8409311
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatac 84  Q
    ||||||| ||||||||||||||| |||| |||||||||| ||||| ||||||  |||| ||||||| |||||||||||||||||||    
T  8409226 ttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgcgtacaatac 8409311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13905131 - 13905034
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtgg 96  Q
    ||||||||||||||||||||||| ||||| |||||||||  ||||  |||||  |||| ||||||| |||||||||| |||||| |||||||||||||    
T  13905131 ttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaaggctgcatacaattcaccaaatggtgg 13905034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 6024216 - 6024326
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    |||||||||||||| || ||||| |||| ||||| |||||||||||||||||  |||| ||||||  ||||| |||||||||||||||||  |||| |||    
T  6024216 ttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggtaagactgcgtacaatacaccaataatgatgg 6024315  T
Q  97 gaccccttccc 107  Q
    |||| ||||||    
T  6024316 gacctcttccc 6024326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 7947514 - 7947415
Alignment:
Q  11 gtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacacc-aaatggtgggaccccttccc 107  Q
    ||||||||||||| || ||||||| |||| |||||| |||| ||| |||||  ||| |||||||||||||||||||||| |||||||||| |||||||||    
T  7947514 gtgactgaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaaggctgcgtacaatacaccaaaatggtgggcccccttccc 7947415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12063450 - 12063510
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  12063450 ttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttgtataaaa 12063510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 24097568 - 24097668
Alignment:
Q  5 tgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacaccaaatggtgggacccc 102  Q
    |||||||| |||||||||| ||| ||| ||||||| ||| |||||||||||||  ||||||| |||||||||| ||||    ||||||||||||||||||    
T  24097568 tgtcatgttactgaaaggtcacgagtttaagtcctcgaaccagcctcttgtataaaaaacagggtaaggctgcttaca----accaaatggtgggacccc 24097663  T
Q  103 ttccc 107  Q
    |||||    
T  24097664 ttccc 24097668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 23930205 - 23930126
Alignment:
Q  73 tgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||||||||| |||||||||||||||| |  || |||| ||||| |||||| |||| |||||||||||||||||    
T  23930205 tgcgtacaatacaccagatggtgggaccccttcacggaccctgcttatgcgggagctttagtgcaccgagttgccctttt 23930126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1941838 - 1941941
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||||| |||||| |||||  ||| || ||||| |  ||||| |||||||| |||||  ||| |||||||||||||||||||||| ||||||||||    
T  1941838 ttgttgtcatctgactggaaggtcgcggattgaagtcatgtaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccgaatggtggga 1941937  T
Q  99 cccc 102  Q
    ||||    
T  1941938 cccc 1941941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14975232 - 14975172
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    ||||||||||||||||| ||||| |||| |||||||||| ||||||||||||||| |||||    
T  14975232 ttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaa 14975172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 20400650 - 20400804
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||||||||| || |||||||||  | ||||||  ||||  |||| ||||||| ||||| ||||||||| ||||| |||| | ||||    
T  20400650 ttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaagactgcgtacagtacactaaatagcggga 20400749  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    ||| || || ||| || | ||||||| | || |||| |||||| ||| |||||||    
T  20400750 cccttttccgaaccctacgtatgcagaaactttagtgcaccgaattgtccttttt 20400804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 14553495 - 14553602
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaa--tggtgg 96  Q
    |||||||||||||||| |||||| || |||||||||||| |||| ||| |||  |||| |||| || ||||||||| ||| |||||||||||  ||||||    
T  14553495 ttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggctgtgtataatacaccaaaactggtgg 14553593  T
Q  97 gaccccttc 105  Q
    |||||||||    
T  14553594 gaccccttc 14553602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 383837 - 383760
Alignment:
Q  74 gcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||||||||||||| ||||||||||||| || || |||| ||||| ||||||  ||| ||||| ||||||||||    
T  383837 gcgtacaatacaccaaattgtgggaccccttctcagaccctgcgtatgcgggagcttcagtccaccgggttgcccttt 383760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 3116263 - 3116126
Alignment:
Q  13 gactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccaaa 110  Q
    ||||||||||| | ||||||||||| | |||||| ||||||||||||||  ||      ||||| |||||||||||||  ||||||||||||||| |  |    
T  3116263 gactgaaaggtcatgggttcaagtcatggaaacaacctcttgtataaaaatga------ctgcgcacaatacaccaaaaatggtgggaccccttctcgga 3116170  T
Q  111 ctctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |  ||| ||||| |||||| ||||||||||  ||||||||||||    
T  3116169 ccttgcgtatgcgggagctttagtacaccggattgccctttttt 3116126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 12892064 - 12892147
Alignment:
Q  73 tgcgtacaatacaccaa--atggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||| ||||||||||  ||||||||||||||||||  || | |||||||| |||||| |||| ||||| |||||||||||||    
T  12892064 tgcgtataatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 12892147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 2755576 - 2755451
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacacc--aaatggtgg 96  Q
    |||||||||||||||||||||||    |||||||||| |  ||||| |||||| ||  ||| | ||  |||||||||||||||||||||  |||||||||    
T  2755576 ttgttgtcatgtgactgaaaggtcgtaggttcaagtcttgcaaacatcctcttataccaaaaataggctaaggctgcgtacaatacaccaaaaatggtgg 2755477  T
Q  97 gaccccttcccaaactctgcatatgc 122  Q
    ||  ||||||||||  ||||||||||    
T  2755476 gagtccttcccaaatcctgcatatgc 2755451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 12885967 - 12886049
Alignment:
Q  72 ctgcgtacaatacaccaaa--tggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||||||||||||| |||  |||||||||||||||||| || |||| ||||  |||||| |||| ||||| |||||||||||    
T  12885967 ctgcgtacaatacacaaaaaatggtgggaccccttcccagaccctgcgtatgtgggagctttagtgcaccgggttgccctttt 12886049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 12889409 - 12889515
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacacc-aaatggtggg 97  Q
    ||||||||| |||| |||||||| || |||||||||| |  |||||||||||||| |  ||||||| | |||||||| ||||||||||| ||| | ||||    
T  12889409 ttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgttaaaaacagggcaaggctgcatacaatacacctaaacgatggg 12889508  T
Q  98 acccctt 104  Q
    |||||||    
T  12889509 acccctt 12889515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 13267788 - 13267862
Alignment:
Q  79 caatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    ||||||||||||||||||||||||||||   || |||| ||||| ||||||  ||| ||||| ||||||||||||    
T  13267788 caatacaccaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccgggttgcccttttt 13267862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 15865992 - 15865902
Alignment:
Q  17 gaaaggttacgggttcaagtcctagaaacagcctctt--gt-ataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcc 106  Q
    ||||||| | |||||||| |||| |||||||||||||  || | ||||||| |||| |||||||  |||||||||||||||||||||||||||    
T  15865992 gaaaggtcatgggttcaattcctggaaacagcctcttacgtaaaaaaacagggtaaagctgcgt--aatacaccaaatggtgggaccccttcc 15865902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 32728308 - 32728211
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtgg 96  Q
    ||||||||||||||||||||||| || | |||||||  | |||||| |||||  |||| ||||||| ||||| ||| |||||||| ||||||| ||||    
T  32728308 ttgttgtcatgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaaacagggtaagactgtgtacaatataccaaatagtgg 32728211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 11849041 - 11849159
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacaccaaa-tggtgggacc 100  Q
    |||||| |||||||||| |||   |||||||||||  |||||| |||||||| |  |||||||  ||| | |||  ||||||||||||| ||||||||||    
T  11849041 ttgtcacgtgactgaaatgttt--ggttcaagtccaggaaacaacctcttgtgttaaaaacaggataaagttgcccacaatacaccaaaatggtgggacc 11849138  T
Q  101 ccttcccaaactctgcatatg 121  Q
    ||||||| |||||||| ||||    
T  11849139 ccttcccgaactctgcgtatg 11849159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33922980 - 33922927
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttg 54  Q
    |||||||||| ||||||||| || || ||||||||||||||||||  |||||||    
T  33922980 ttgttgtcatttgactgaaaagtcacaggttcaagtcctagaaacgtcctcttg 33922927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 6808468 - 6808532
Alignment:
Q  89 aatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||||||||||||||  || |||  ||||| |||||| |||| ||||| ||||||||||||    
T  6808468 aatggtgggaccccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgcccttttt 6808532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 14341163 - 14341080
Alignment:
Q  58 aaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgag 142  Q
    ||||||| |||||||||||||||||||||| | || || ||| |||| ||| || |||  |||||| ||||| ||||||||||||    
T  14341163 aaaacagggtaaggctgcgtacaatacaccgattgctgagactcctttccagac-ctgtgtatgcaagagctttagtacaccgag 14341080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 105
Target Start/End: Original strand, 22967237 - 22967265
Alignment:
Q  77 tacaatacaccaaatggtgggaccccttc 105  Q
    |||||||||||||||||||||||||||||    
T  22967237 tacaatacaccaaatggtgggaccccttc 22967265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 105
Target Start/End: Complemental strand, 23821156 - 23821128
Alignment:
Q  77 tacaatacaccaaatggtgggaccccttc 105  Q
    |||||||||||||||||||||||||||||    
T  23821156 tacaatacaccaaatggtgggaccccttc 23821128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24734616 - 24734676
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    ||||||||||||||||||||||| |   |||||| |||| |||||| |||||||| |||||    
T  24734616 ttgttgtcatgtgactgaaaggtcaaaagttcaaatccttgaaacaacctcttgtgtaaaa 24734676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 6e-55; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 48598975 - 48598823
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  48598975 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 48598876  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||  ||  ||||||||| ||||||||||| ||||| ||||||||||||    
T  48598875 ccttcccggaccatgcatatgccggagctctagtgcaccgggttgcccttttt 48598823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 47528680 - 47528521
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  47528680 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 47528581  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttttattata 160  Q
    |||||||  || ||| |||||  ||||||||||| ||||| ||||||||||||| |||||    
T  47528580 ccttcccggaccctgaatatgtgggagctctagtgcaccgggttgccctttttttttata 47528521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20224967 - 20225117
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  20224967 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 20225066  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||  || |||||||||| ||||||||||| ||||| ||||||||||    
T  20225067 ccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 20225117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 9832463 - 9832311
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||| || |||||||||||| |||||||||||||||  |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  9832463 ttgttgtgatctgactgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 9832364  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||  || |||||||||||||| ||||||| ||||| ||||||||||||    
T  9832363 ccttcccggaccctgcatatgcaggaactctagtgcaccgggttgcccttttt 9832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 11054298 - 11054145
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||| ||||||| |||||||| ||||| |||||||||||||||||||||| || |||    
T  11054298 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgtaaaacagggtaagactgcgtacaatacaccaaatggcggaacc 11054199  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||  || |||||||||| ||||||||||| ||||| |||||||||||||    
T  11054198 ccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 11054145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 29208039 - 29207900
Alignment:
Q  10 tgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaa 109  Q
    |||||||||||||| ||||||||||||||| ||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||      
T  29208039 tgtgactgaaaggtcacgggttcaagtcctggaaattgcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 29207940  T
Q  110 actctgcatatgcaggagctctagtacaccgagttgccct 149  Q
    || |||||||||| ||||||||||| ||||| ||||||||    
T  29207939 accctgcatatgcgggagctctagtgcaccgggttgccct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 5648242 - 5648395
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  5648242 ttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggac 5648341  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    ||||||||  || |||| ||||| ||||||  ||| ||| | ||||||||||||    
T  5648342 cccttcccggaccctgcgtatgcgggagcttcagtgcactgggttgcccttttt 5648395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 17043546 - 17043416
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||| ||||||||||||| || |||||||||||| ||||||||||||||| |||||  ||| |||||||||||||||||||||||||||||||||    
T  17043546 ttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaaatggtggga 17043447  T
Q  99 ccccttcccaaactctgcatatgcaggagct 129  Q
    |||||||||| || |||||||||| ||||||    
T  17043446 ccccttcccagaccctgcatatgctggagct 17043416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 6430777 - 6430627
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  6430777 ttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggac 6430678  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    | ||||||  || |||| ||||| |||||| |||  ||||| |||||||||    
T  6430677 cacttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctt 6430627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 30639363 - 30639517
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    |||||||| |||||||||||||| || |||||||||||| ||||||| ||||||| ||||| ||| |||||||||||||||||||||||||||||| |||    
T  30639363 ttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgagac 30639462  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||  || |||||||||| |||||| |||| ||| | |||||||||||||    
T  30639463 cccttcccggaccctgcatatgcgggagctttagtgcactgggttgccctttttt 30639517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 39077946 - 39077793
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| |||||||| |||||| ||||||||||| ||||||||||| |||     
T  39077946 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacagggtaaggttgcgtacaatataccaaatggtgagaca 39077847  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
     ||| ||  || |||||||||| ||||||||||| ||||| |||||| ||||||    
T  39077846 tctttccggaccctgcatatgcgggagctctagtgcaccgggttgccttttttt 39077793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 47443956 - 47444095
Alignment:
Q  17 gaaaggttacgggttcaagtcctagaaacagcctcttg--tataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactct 114  Q
    ||||||| ||||||||||||||| ||||||||||||||  || ||||||| ||||||||||||||||||||||||||||||||||||||||||  || ||    
T  47443956 gaaaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccct 47444055  T
Q  115 gcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||||||||||  ||| ||| | |||||||||||||    
T  47444056 gcatatgcaggagcttcagtgcactgggttgccctttttt 47444095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 5306811 - 5306708
Alignment:
Q  5 tgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggacccct 103  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  5306811 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaatcagggtaaggttgcgtacaatacaccaaatggtgggacccct 5306712  T
Q  104 tccc 107  Q
    ||||    
T  5306711 tccc 5306708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 16408755 - 16408598
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||  |||| ||||||| ||||| |||||||||||||||||  ||||||||    
T  16408755 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaataatggtgg 16408656  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
     ||||||||||  || | |||||||| |||||| |||| ||||| |||||||||||||    
T  16408655 aaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 16408598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 16911545 - 16911700
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||  |||| ||| ||| |||||||||||||||||||||||  ||||||||    
T  16911545 ttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgcgtacaatacaccaataatggtgg 16911644  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||||  || |||| || || |||||| ||||  |||| |||||||||||    
T  16911645 gaccccttcccggaccctgcgtacgcgggagctttagtttaccgggttgccctttt 16911700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 8473772 - 8473621
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||||||| |||| | |||||| |||||||||||||| ||||||||||||||| |  ||||| |||||||||| ||||||||||||||||||||||||    
T  8473772 ttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctcttgtgtttaacagggtaaggctgcatacaatacaccaaatggtgggacc 8473673  T
Q  101 ccttccc--aaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    |||||||   | | |||||||||| |||||| |||| ||||| |||||||||    
T  8473672 ccttccccggacccctgcatatgcgggagctttagtgcaccgggttgccctt 8473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 19027831 - 19027972
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||| | |||||| |||||  ||| |||||||||||||||||||||||| ||||||||    
T  19027831 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaattggtggga 19027930  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccg 140  Q
    |||||| ||| ||||||| ||||  |||||| |||| |||||    
T  19027931 cccctttccagactctgcgtatgtgggagctttagtgcaccg 19027972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 40915812 - 40915962
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||  ||||| ||||||||||||||| ||||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||     
T  40915812 ttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggag 40915911  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    ||||||||  || |||| ||||| ||||||  ||| |||||  ||||||||    
T  40915912 cccttcccggaccctgcgtatgcgggagcttcagtgcaccggattgccctt 40915962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 21646947 - 21647098
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||| ||||| || |||||||||||| ||||||||||||  |||| |||| || |||||||||||||||||| ||||  ||||||||    
T  21646947 ttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggctgcgtacaatataccaataatggtgg 21647046  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccc 148  Q
    |||||||||||| || | |||||||| |||||| |||| ||||| |||||||    
T  21647047 gaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccc 21647098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 35567153 - 35567309
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||||||| |||||||||| | ||||||||||| | ||||||||| ||||| |||||  ||| ||||||||| |||||| ||||||||||||||||    
T  35567153 ttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggtaaggctgtgtacaacacaccaaatggtggga 35567252  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    ||||||||| ||| |||| | ||| |||||| |||| ||||| | ||||||||||||    
T  35567253 ccccttcccgaaccctgcgtctgcgggagctttagtgcaccgggctgccctttttta 35567309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 25 - 153
Target Start/End: Complemental strand, 10277883 - 10277755
Alignment:
Q  25 acgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcag 124  Q
    |||||||||| |||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||  ||||||||||| || |||||||||| |    
T  10277883 acgggttcaaatccttgaaacagcctcttgtataaaataggataaggctgcgtacaatacaccaaatggtgaaaccccttcccagaccctgcatatgcgg 10277784  T
Q  125 gagctctagtacaccgagttgcccttttt 153  Q
    ||| ||||||  ||||  |||||||||||    
T  10277783 gagttctagtgaaccggattgcccttttt 10277755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 23501776 - 23501927
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaa--atggtgg 96  Q
    ||||||||||||||||||||||| |||||||||||||      |||||||||||| |||||  ||| |||||| |||||||||||||||||  |||||||    
T  23501776 ttgttgtcatgtgactgaaaggtcacgggttcaagtc------acagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgg 23501869  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||||||  || |||||||||| |||||| |||| ||||| |||||||||||||    
T  23501870 gaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttttt 23501927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 54175046 - 54175202
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaa-cagcctcttgtataaaa-cagagtaaggctgcgtacaatacacc-aaatggtggg 97  Q
    |||||||||||||||||||| || |||| |||||||||| |||| ||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||    
T  54175046 ttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaaatggtggg 54175145  T
Q  98 acccctt-cccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    ||||||| |||  || |||||||||| |||||| |||| ||||| | ||||||||||    
T  54175146 accccttccccggaccctgcatatgcgggagctttagtgcaccgggctgcccttttt 54175202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 14590820 - 14590922
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt---ataaaacagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||   | ||||||| |||||||||| ||||||||| |||||||||||    
T  14590820 ttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaatacatcaaatggtggg 14590919  T
Q  98 acc 100  Q
    |||    
T  14590920 acc 14590922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 25463108 - 25463235
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccc 101  Q
    |||||||||||||||||||| ||||||||||||||| |||||| |||||  |||| ||||| | | |||| ||||||||| |||||||||||||||||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaactgggaaaggttgcgtacaacacaccaaatggtgggaccc 25463207  T
Q  102 cttcccaaactctgcatatgcaggagct 129  Q
    ||||||  || |||||||||| ||||||    
T  25463208 cttcccggaccctgcatatgcgggagct 25463235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 41018945 - 41018837
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||| |||||||| |||||  || |||||||| ||||||||||||||||| |||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaattagggtaaggctacgtacaatacaccaaatagtgggac 41018846  T
Q  100 cccttccca 108  Q
    |||||||||    
T  41018845 cccttccca 41018837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 44363284 - 44363130
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctc--ttgtataaaacagagtaaggctgcgtacaatacacc--aaatggtgg 96  Q
    ||||||||||||||||||||||| ||| |||||||||||  ||||||||||   |||| ||||||| ||| ||||||||||||  ||||  |||||||||    
T  44363284 ttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtacaacgcaccaaaaatggtgg 44363185  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||||||  || |||| ||||| |||||| |||| ||||| ||||||||||    
T  44363184 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 44363130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 154
Target Start/End: Complemental strand, 20639777 - 20639655
Alignment:
Q  35 gtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccaaactctgcatatgcaggagctct 131  Q
    ||||| ||||||||||||||| |||||  ||| ||||||||||||||||||||||||| |||||||||||||||||  || |||| ||||| |||||| |    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccctgcgtatgcgggagcttt 20639678  T
Q  132 agtacaccgagttgccctttttt 154  Q
    ||| ||||| |||||||||||||    
T  20639677 agtgcaccgggttgccctttttt 20639655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 54730232 - 54730391
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt---ataaaacagagtaaggctgcgtacaatacacca--aatggtg 95  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||||||||||   | |||| ||  |||||||||||| |||||||||  |||| ||    
T  54730232 ttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaataggataaggctgcgtataatacaccaataatgatg 54730331  T
Q  96 ggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    | ||||||||||  || |||| ||||| |||||| |||| |||||| || ||||||||||    
T  54730332 gaaccccttcccggaccctgcgtatgcgggagctttagtgcaccgaattaccctttttta 54730391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 47441682 - 47441574
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||| ||||||||||||| || ||||||||||| |||||||| ||||| | |||||  ||| ||||||||| ||||||||||||||||||| |||    
T  47441682 ttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggtaaggctgtgtacaatacaccaaatggttgga 47441583  T
Q  99 ccccttccc 107  Q
    |||||||||    
T  47441582 ccccttccc 47441574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 49938742 - 49938615
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacacc-aaatggtggga 98  Q
    ||||||||| ||||||||||||| || |||||||||||| ||||||||||||||| | ||||| | |||||   | |||||||||||| |||||||||||    
T  49938742 ttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacggggtaag---gtgtacaatacaccaaaatggtggga 49938646  T
Q  99 ccccttcccaaactctgcatatgcaggagct 129  Q
    |||||||||| || |||||||||| ||||||    
T  49938645 ccccttcccataccctgcatatgcgggagct 49938615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30496472 - 30496366
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||| ||||||||||||| ||| ||||||||| | ||||||||||||||| ||||   | |||||||||| ||||||||||||||||| |||||     
T  30496472 ttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaacacgggtaaggctgcatacaatacaccaaatggggggact 30496373  T
Q  101 ccttccc 107  Q
    |||||||    
T  30496372 ccttccc 30496366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 7385628 - 7385520
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctc--ttgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||||||||   |||| |||| || |||||| || || ||||||||||||||||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaaggttgtgtgcaatacaccaaatggtggga 7385529  T
Q  99 ccccttccc 107  Q
    ||| |||||    
T  7385528 ccctttccc 7385520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 13256549 - 13256397
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||| ||||| |  |||||||||||| |    |||||||  |||| ||||||| |||||||||||||||||||||||  ||| ||||    
T  13256549 ttgttgtcatgtgactggaaggtcataggttcaagtcctgg----agcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatagtgg 13256454  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    ||||||||||| ||| | |||| ||| |||||| |||| ||||| ||||||||||||    
T  13256453 gaccccttcccgaaccccgcatctgcgggagctttagtgcaccgggttgcccttttt 13256397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 30690333 - 30690188
Alignment:
Q  3 gttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa---------cagagtaaggctgcgtacaatacaccaaatgg 93  Q
    ||||||| ||||||||||||| ||||||||||||||| |||| |||||||||| |||||         ||| |||||||||| ||||||||||||| |||    
T  30690333 gttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaataaaaaacagggtaaggctgcatacaatacaccaattgg 30690234  T
Q  94 tgggaccccttcccaaactctgcatatgcaggagctctagtacacc 139  Q
    ||||||||||||||  || |||| ||||| |||||| |||| ||||    
T  30690233 tgggaccccttcccggaccctgcgtatgcgggagctttagtgcacc 30690188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 49796821 - 49796910
Alignment:
Q  41 gaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagct 129  Q
    ||||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||    
T  49796821 gaaacagcctcttgtgttaaaacatggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcgggagct 49796910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 153
Target Start/End: Original strand, 25629086 - 25629186
Alignment:
Q  53 tgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||| |||| || ||||||||| ||||||||||||||||||||||||||||||||  || || ||||||| |||||| |||| ||||| |||||||||||    
T  25629086 tgtaaaaaatagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctacatatgcgggagctttagtgcaccgggttgccctttt 25629185  T
Q  153 t 153  Q
    |    
T  25629186 t 25629186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 37494834 - 37494969
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||| |||| ||||||||||| || |||||||||||| |||||| |||||  |||| ||||||| |||||| ||| ||||||| ||||||||||||||    
T  37494834 ttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggttgcatacaatataccaaatggtggga 37494933  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagt 134  Q
    |||||| |   || |||| |||||||||||| ||||    
T  37494934 cccctttcgggaccctgcgtatgcaggagctttagt 37494969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 21489099 - 21489201
Alignment:
Q  30 ttcaagtcctagaaacagcctcttg--tataaaacagagtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccaaactctgcatatgcagga 126  Q
    |||||||||| ||||||||||||||  || ||||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||| |||| ||||| |||    
T  21489099 ttcaagtcctggaaacagcctcttgcgtaaaaaacagagtaagactgcgtacaatgcaccaaaatggtgggaccccttcccgaaccctgcgtatgcggga 21489198  T
Q  127 gct 129  Q
    |||    
T  21489199 gct 21489201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 154 - 247
Target Start/End: Original strand, 49304117 - 49304210
Alignment:
Q  154 tattatatatagcatttcattaaactaatttcataccaaggnnnnnnnnnnnnnngagcttccaaacaggcaactcagttgatgagttgagagt 247  Q
    |||||||||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||||||||||||    
T  49304117 tattatatatagcatttcattaaactaatttcataccaaggaaaaaaaagaaaaagagcttccaaacaggcaactcagttgatgagttgagagt 49304210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 14983817 - 14983970
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||||| ||| || ||||| |||| |||||||| | ||||||||||||||| ||||| | ||  ||||| ||| |||||||||| |||||||||||    
T  14983817 ttgttgtcatatgattggaaggtcacggattcaagtctttgaaacagcctcttgtgtaaaaaatagggtaaggttgcctacaatacactaaatggtggga 14983916  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||  || |||| ||||| |||||| ||||  |||  |||||||||||    
T  14983917 ccccttcccggaccctgcgtatgcgggagctttagtgtaccatgttgccctttt 14983970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20908790 - 20908633
Alignment:
Q  1 ttgttgtcatgtgactgaaag-gttacgggttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaa-tggtgg 96  Q
    ||||||||||||||||||||  |||||  ||||||||| | |||||| | |||| | ||||| |||  ||||||||||||||||||||||||| ||||||    
T  20908790 ttgttgtcatgtgactgaaaatgttacatgttcaagtcatggaaacatcgtcttttctaaaaaagaaggtaaggctgcgtacaatacaccaaaatggtgg 20908691  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||||| ||| |||| ||||| |||||| |||| |||   | |||||||||||    
T  20908690 gaccccttcccgaaccctgcgtatgcgggagctttagtgcacaaggctgccctttttt 20908633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 32629418 - 32629313
Alignment:
Q  3 gttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt-ataaaacagagtaaggctgcgtacaatacaccaaa-tggtgggacc 100  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||||||||||| | ||||||| ||||||| || ||| |||||||||| ||| ||||||    
T  32629418 gttgtcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctcttgtaaaaaaacagggtaaggccgcctac-atacaccaaattggcgggacc 32629320  T
Q  101 ccttccc 107  Q
    |||||||    
T  32629319 ccttccc 32629313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 38786673 - 38786747
Alignment:
Q  80 aatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||||||||||||||||||||||  || |||||||||| ||||||||||| ||||| |||||||||||||    
T  38786673 aatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 38786747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 487287 - 487187
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacac-caaatggtggg 97  Q
    ||||||||||||||||||||||| ||||||||||||| | |||||| |||||  |||||||||||  |||| ||||||||||||||||  ||||||||||    
T  487287 ttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaaagctgcgtacaatacactaaaatggtggg 487188  T
Q  98 a 98  Q
    |    
T  487187 a 487187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 150
Target Start/End: Complemental strand, 7909397 - 7909281
Alignment:
Q  36 tcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgc-aggagctctag 133  Q
    |||| ||||||| ||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||| |||||  |||||| |||    
T  7909397 tcctggaaacagtctcttgtgtaaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcggggagctttag 7909298  T
Q  134 tacaccgagttgccctt 150  Q
    | || || |||||||||    
T  7909297 tgcatcgggttgccctt 7909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 10660387 - 10660496
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||| |||||  |||| |||| || ||| |||||| ||||||||||||  |||||||     
T  10660387 ttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcatacaatacaccaataatggtga 10660486  T
Q  97 gaccccttcc 106  Q
    ||||||||||    
T  10660487 gaccccttcc 10660496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 10874532 - 10874641
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||| |||||  |||| |||| || ||| |||||| ||||||||||||  |||||||     
T  10874532 ttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcatacaatacaccaataatggtga 10874631  T
Q  97 gaccccttcc 106  Q
    ||||||||||    
T  10874632 gaccccttcc 10874641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 54967004 - 54967133
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||||||||| ||  |||||||| || |||| | |||||  |||| ||||||| |||||| ||| ||||||| ||||||||||||||    
T  54967004 ttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggtaaggttgc-tacaatataccaaatggtggga 54967102  T
Q  99 ccccttcccaaactctgcatatgcaggagct 129  Q
    |||||||||  || || ||||||| ||||||    
T  54967103 ccccttcccgtaccctacatatgcgggagct 54967133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 151
Target Start/End: Original strand, 20225119 - 20225211
Alignment:
Q  61 acagagtaaggctgcgtacaatacaccaa--atggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||  || | |||||||| |||||| |||| ||||| ||||||||||    
T  20225119 acagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 20225211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 30352743 - 30352577
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-------cagagtaag----gctgcgtacaatacaccaa 89  Q
    ||||||||| ||||| ||||||| |||||||  |||||| ||||||||||||||| |||||       ||| |||||    |||||||||||||||||||    
T  30352743 ttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaaaaaaaacagggtaagtaaagctgcgtacaatacaccaa 30352644  T
Q  90 a--tggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |  ||||||||||||||| |  || |||| ||||| |||||| |||| ||||| |||||||||||||    
T  30352643 aaatggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccgtgttgccctttttt 30352577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42164300 - 42164224
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcg 76  Q
    ||||||||||||||||||||||| ||||||||||||| | |||||| |||||||| | ||||||| |||||||||||    
T  42164300 ttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaacagggtaaggctgcg 42164224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 9987957 - 9987879
Alignment:
Q  30 ttcaagtcctagaaacagcctcttgtataaa--acagagtaaggctgcgtacaatacaccaaatggtgggaccccttcc 106  Q
    |||||||||| |||||| |||||||| ||||  | || |||||||||| ||||||||||||||||||||||||||||||    
T  9987957 ttcaagtcctggaaacaacctcttgtgtaaacaatagggtaaggctgcatacaatacaccaaatggtgggaccccttcc 9987879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 30581619 - 30581482
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa---cagagtaaggctgcgtacaatacaccaaa-tggtgg 96  Q
    |||||||||  | ||| |||||| | ||||||||||| | |||||| |||||||| |||||   ||| |||||| || ||||||||||||||| ||||||    
T  30581619 ttgttgtcacatcactaaaaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaaacagggtaagggtgtgtacaatacaccaaaatggtgg 30581520  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagt 134  Q
    |||||||||||  || ||||||||| ||||||| ||||    
T  30581519 gaccccttcccggaccctgcatatgtaggagctttagt 30581482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 32478937 - 32478835
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||| || |||| || |||||||||||| |||||| ||||| || | ||||||| |||||||||     ||||||||||||||||||||    
T  32478937 ttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctctagtgtaaaaacagggtaaggctg-----aatacaccaaatggtgggac 32478843  T
Q  100 cccttccc 107  Q
    ||||||||    
T  32478842 cccttccc 32478835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 51865149 - 51865060
Alignment:
Q  42 aaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagct 129  Q
    |||||||||||||| ||||| | |  |||||||||||||||||||||||||||||||| |||||||||  || |||| ||||| ||||||    
T  51865149 aaacagcctcttgtgtaaaaaacatggtaaggctgcgtacaatacaccaaatggtggggccccttcccggaccctgcgtatgcgggagct 51865060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17315450 - 17315390
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||| |||||||| |||||    
T  17315450 ttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgtaaaa 17315390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23580360 - 23580300
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||| |||||||||| |||||    
T  23580360 ttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaa 23580300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 25343170 - 25343261
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaa 90  Q
    ||||||||| |||||||| |||| || ||||||||| || |||| || ||||||| |||||  ||| |||||||||||||||||||||||||    
T  25343170 ttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 25343261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 39029213 - 39029082
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacac-caaatggtggg 97  Q
    |||||||| ||||||| |||||| |  |||||||| | | ||||||||||||  |||| ||||||| ||||||||| |||||||||||  ||||||||||    
T  39029213 ttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacacgaaaatggtggg 39029114  T
Q  98 accccttcccaaactctgcatatgcaggagct 129  Q
    ||| ||| ||  || |||||||||| ||||||    
T  39029113 accactttccggaccctgcatatgcgggagct 39029082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 28494222 - 28494298
Alignment:
Q  87 caaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttttattatatata 164  Q
    |||||||||||||||||||||| |  |||||||||| ||||||||||| ||||| | || |||||||| |||||||||    
T  28494222 caaatggtgggaccccttcccagatcctgcatatgcgggagctctagtgcaccgggctg-cctttttttttatatata 28494298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20405076 - 20405224
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa---cagagtaaggctgcgtacaatacaccaa--atggtg 95  Q
    ||||||||||||||||| ||||| |||||       ||||||||||||||||||| |||||   ||| |||||  |||||||||||||| ||  ||||||    
T  20405076 ttgttgtcatgtgactggaaggtcacggg-------cctagaaacagcctcttgtgtaaaaaaacagggtaagattgcgtacaatacactaataatggtg 20405168  T
Q  96 ggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||||||||||  || | |||||||| |||||| |||| ||  | ||||||||||    
T  20405169 ggaccccttcccggaccccgcatatgcgggagctttagtgcattgggttgcccttt 20405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 32484307 - 32484371
Alignment:
Q  90 atggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||||||||||||  || |||||||||| |||||| |||| ||||| |||||||||||||    
T  32484307 atggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttttt 32484371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 54640491 - 54640431
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    ||||||||| ||| ||||||||| ||||||||||||| | ||||||||||||||| |||||    
T  54640491 ttgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaa 54640431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 7038041 - 7038126
Alignment:
Q  6 gtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaa 90  Q
    |||||||||||||||||| || |||||||||||| |||||||| |||  |||| |||| || ||||| || ||||||||||||||||    
T  7038041 gtcatgtgactgaaaggtcacaggttcaagtcct-gaaacagcttcttgtgtaaaaaatagggtaagacttcgtacaatacaccaaa 7038126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12257745 - 12257691
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt 55  Q
    ||||||||| |||| |||||||| |||||||||| ||||||||||||| ||||||    
T  12257745 ttgttgtcacgtgattgaaaggtcacgggttcaaatcctagaaacagcgtcttgt 12257691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43035231 - 43035285
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt 55  Q
    ||||||||| ||||||||||||| ||||||||||||||  |||||| ||||||||    
T  43035231 ttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctcttgt 43035285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 4222121 - 4222072
Alignment:
Q  58 aaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttccc 107  Q
    |||||| |||||||||||||| ||||||| || |||||||||||||||||    
T  4222121 aaaacaaagtaaggctgcgtagaatacacaaattggtgggaccccttccc 4222072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 17079749 - 17079696
Alignment:
Q  53 tgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcc 106  Q
    |||||||||||| |||||||||| |||||||| | |||||||||||||| ||||    
T  17079749 tgtataaaacagggtaaggctgcatacaatacgctaaatggtgggaccctttcc 17079696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 44718641 - 44718702
Alignment:
Q  90 atggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||||||||||||||||| || |||| ||||| |||||| ||| |||||| ||||||||||    
T  44718641 atggtgggaccccttcccagaccctgcgtatgcgggagctttagcacaccgggttgcccttt 44718702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 33836563 - 33836484
Alignment:
Q  77 tacaatacaccaa--atggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||||||||  ||||||||||||||||||  || |||| ||||| |||||| |||| || || |||||||||||||    
T  33836563 tacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggttgccctttttt 33836484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 44357206 - 44357313
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtata--aaacagagtaaggctgcgtacaatacacc-aaatggtgggacc 100  Q
    |||| |||| |||||||||| | | |||||||||||||||||| ||| |||| ||  ||| |||||||| |  ||||||||||||| |||||| ||||||    
T  44357206 ttgttatgtaactgaaaggtcatgagttcaagtcctagaaacaaccttttgtgtaataaatagagtaagacgacgtacaatacaccaaaatggcgggacc 44357305  T
Q  101 ccttccca 108  Q
     |||||||    
T  44357306 tcttccca 44357313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 55766618 - 55766510
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacggg-ttcaagtcctagaaacagcctcttgtata-aaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||| | ||||| ||||| |||||||  | |||||||  |||||| |  |||||| |||||||||||||||||||||  |||||||| |    
T  55766618 ttgttgtcatgtgaccggaaggtcacggggttcaagttttggaaacagtttcttgtgtgtaaacagggtaaggctgcgtacaatacactgaatggtggaa 55766519  T
Q  99 ccccttccc 107  Q
    |||| ||||    
T  55766518 ccccatccc 55766510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 12711534 - 12711495
Alignment:
Q  66 gtaaggctgcgtacaatacaccaaatggtgggaccccttc 105  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  12711534 gtaagactgcgtacaatacaccaaatggcgggaccccttc 12711495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 164
Target Start/End: Complemental strand, 36816466 - 36816371
Alignment:
Q  70 ggctgcgtacaatacaccaaat-ggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttttattatatata 164  Q
    |||||||||||||||||||||  |||||||| ||||||   || |||  ||||| |||||| ||||  |||| ||||||||||||| |||||||||    
T  36816466 ggctgcgtacaatacaccaaaaaggtgggactccttcctggaccctgtgtatgcgggagctttagtgtaccgggttgccctttttttttatatata 36816371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 25388249 - 25388311
Alignment:
Q  89 aatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||||||||||||||  || |||| |||||| ||||| |||| ||||| ||||||||||    
T  25388249 aatggtgggaccccttcccggaccctgcgtatgcatgagctttagtgcaccgggttgcccttt 25388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 38755970 - 38755908
Alignment:
Q  89 aatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||||||||||||||  || |||| ||||| |||||| |||| ||||| ||||||||||    
T  38755970 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 38755908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 10380086 - 10379997
Alignment:
Q  9 atgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||||||||||||| ||  |||||||||||| ||||| |||||||| | |||| ||  |||   ||||||||||||||||||| |||||    
T  10380086 atgtgactgaaaggtcacttgttcaagtcctacaaacaacctcttgtgtaaaaataggataaaattgcgtacaatacaccaaatagtggg 10379997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 9037741 - 9037844
Alignment:
Q  29 gttcaagtcctagaaacagcctcttgt--ataaaacagagtaaggctgcgtacaatacaccaaatggtgggacccc-ttcccaaactctgcatatgcagg 125  Q
    ||||||||| |||||| |  |||||||  |||||| || ||||| |||| ||||||||||| |||||| ||||||| || || ||| |||| ||||||||    
T  9037741 gttcaagtcatagaaataatctcttgtgcataaaatagggtaagactgcatacaatacaccgaatggtaggaccccttttccgaacactgcgtatgcagg 9037840  T
Q  126 agct 129  Q
    ||||    
T  9037841 agct 9037844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 11394923 - 11394987
Alignment:
Q  87 caaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||||||||||||| ||  || |||| ||||| |||||| |||| ||||| ||||||||||    
T  11394923 caaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11394987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 11404650 - 11404714
Alignment:
Q  87 caaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||||||||||||| ||  || |||| ||||| |||||| |||| ||||| ||||||||||    
T  11404650 caaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11404714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 49938590 - 49938490
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaataca-ccaaatggtggga 98  Q
    ||||||||| ||||||||||||| || | |||||||| | ||| |||| | |||| | ||||||| |||||||||||| |||| || | |||||||||||    
T  49938590 ttgttgtcacgtgactgaaaggtcacagattcaagtcttggaagcagcgtattgtgtaaaaacagggtaaggctgcgtccaattcatcaaaatggtggga 49938491  T
Q  99 c 99  Q
    |    
T  49938490 c 49938490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 50856388 - 50856344
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaac 45  Q
    |||||||||  ||| |||||||| |||||||||||||||||||||    
T  50856388 ttgttgtcacatgattgaaaggtcacgggttcaagtcctagaaac 50856344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 55830873 - 55830765
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgg-gttcaagtcctagaaacagcctcttgtata-aaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||  | ||||| |||| ||||||||  | ||||||| ||||||| |  |||||| |||| ||||||||||||||||  |||||||| |    
T  55830873 ttgttgtcatgtgatcggaaggtcacggagttcaagttttggaaacagtctcttgtgtgtaaacagggtaatgctgcgtacaatacactgaatggtggaa 55830774  T
Q  99 ccccttccc 107  Q
    |||| ||||    
T  55830773 ccccatccc 55830765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 3e-54; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 32703411 - 32703558
Alignment:
Q  5 tgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacccctt 104  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacccctt 32703510  T
Q  105 cccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||  || |||||||||| ||||||||||| ||||| |||||||||||    
T  32703511 cccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 32703558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 35710296 - 35710449
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||    
T  35710296 ttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaatagggtaaggctgcgttcaatacaccaaatggtgggacc 35710395  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||  |   ||||||||| ||||||||||| ||||| |||||||||||||    
T  35710396 ccttcccggaacatgcatatgcgggagctctagtgcaccgggttgccctttttt 35710449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 8170134 - 8169982
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||    
T  8170134 ttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 8170035  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||  || |||||||||| |||| |  ||| ||||| ||||||||||||    
T  8170034 ccttcccggaccctgcatatgcgggagtttcagtgcaccgggttgcccttttt 8169982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 38879564 - 38879719
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||| |||||||||||||||||||||||  ||||||||    
T  38879564 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgg 38879663  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||||  || |||| ||||| |||||| |||| ||||| |||||||||||    
T  38879664 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 38879719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 24448873 - 24449028
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||| ||||| | ||  ||||||||||||||||||||||||||||||||    
T  24448873 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgtacaatacaccaaatggtggga 24448972  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||||  || |||| |||||||||||| |||| ||||| |||||||||||||    
T  24448973 ccccttcccggaccctgcgtatgcaggagctttagtgcaccgggttgccctttttt 24449028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 41014302 - 41014454
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  41014302 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggac 41014401  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||   || | |||||||| |||||| |||| ||||| |||||||||||    
T  41014402 cccttcctggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 41014454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 22861818 - 22861668
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||| ||||||| ||||||| |||||| ||||  |||||||| ||||||||||||||    
T  22861818 ttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttgtgtaaaaca-agtaagactgctcacaatacatcaaatggtgggacc 22861720  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||| | ||| |||||||||| ||||||||||| |||||| ||||||||||    
T  22861719 ccttctcgaaccctgcatatgcgggagctctagtgcaccgaattgccctttt 22861668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 1405170 - 1405326
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaaca--gagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||  ||||| ||||||||||||||| |||||| |||||| ||||||| |  |||||||  ||||||||||||||||||||||||||    
T  1405170 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaacaacctcttatataaaaaatagagtaagtttgcgtacaatacaccaaatggtggga 1405269  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    ||| ||||  ||| |||||||||| |||||||||||||||||  |||||||||||||    
T  1405270 ccctttcctgaaccctgcatatgcgggagctctagtacaccggattgccctttttta 1405326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 4619258 - 4619103
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||| |||||||  |||| ||||||| |||||||||||||||||||||||  ||||||||    
T  4619258 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgg 4619159  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||||  || | ||||||||  ||||| |||| ||||| |||||||||||    
T  4619158 gaccccttcccggaccccgcatatgcgagagctttagtgcaccgggttgccctttt 4619103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 43334185 - 43334341
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt---ataaaacagagtaaggctgcgtacaatacacc--aaatggtg 95  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||   | ||||||| ||||||||||||||||||||||  ||||||||    
T  43334185 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtg 43334284  T
Q  96 ggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    ||||||||||||  || ||||  |||| |||||| |||| ||||| ||||||||||||    
T  43334285 ggaccccttcccggaccctgc-gatgcgggagctttagtgcaccgggttgcccttttt 43334341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 7368413 - 7368528
Alignment:
Q  33 aagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctcta 132  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||  || |||||||||  |||||||||    
T  7368413 aagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaattggtgggaccccttcccggaccctgcatatgtgggagctcta 7368512  T
Q  133 gtacaccgagttgccc 148  Q
    || ||||| |||||||    
T  7368513 gtgcaccgggttgccc 7368528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 27328735 - 27328867
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||| ||||  |||| ||||||| |||||||||||||||||||||||  ||||||||    
T  27328735 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgg 27328834  T
Q  97 gaccccttcccaaactctgcatatgcaggagct 129  Q
    ||||||||||| ||| |||| ||||| ||||||    
T  27328835 gaccccttcccgaaccctgcgtatgcgggagct 27328867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 22908014 - 22907913
Alignment:
Q  3 gttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggaccc 101  Q
    ||||| ||||||||||||||| | |||||||||||| |||||||||||||||| | |||||||||||||| ||| |||||||||||||||||||||||||    
T  22908014 gttgttatgtgactgaaaggtcaagggttcaagtccaagaaacagcctcttgtgtaaaaacagagtaaggttgcatacaatacaccaaatggtgggaccc 22907915  T
Q  102 ct 103  Q
    ||    
T  22907914 ct 22907913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37024706 - 37024626
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaa 81  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  37024706 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaa 37024626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 1565414 - 1565566
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttg---tataaaacagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    |||||||||||||||||||||||  |||||||||||||| |||||| |||||||    | |||||| | |||||||||||||||| |||||||||| |||    
T  1565414 ttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaaaaaaacatattaaggctgcgtacaatgcaccaaatggcggg 1565513  T
Q  98 accccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||||||||  || |||||||||  |||||| |||| ||||| ||||||||||    
T  1565514 accccttcccggaccctgcatatgtgggagct-tagtgcaccgggttgcccttt 1565566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 151
Target Start/End: Complemental strand, 34154909 - 34154814
Alignment:
Q  56 ataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||| | ||||||||| ||||| ||||||||||    
T  34154909 ataaatcagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcggtagctctagtgcaccgggttgcccttt 34154814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 1850624 - 1850729
Alignment:
Q  2 tgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||||||||||||||||||| ||||||||||||||  |||| | |||||||| | |||||||| ||||| ||||||||||||| ||||||||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaaaaacagaataagggtgcgtacaatacatcaaatggtgggacc 1850723  T
Q  101 ccttcc 106  Q
     |||||    
T  1850724 acttcc 1850729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 12006482 - 12006329
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacggg-ttcaagtcctagaaacagcctctt--gtataaaacagagtaaggctgcgtacaatacaccaa--atggtg 95  Q
    ||||||||||||||||||||||| ||||| |||||||| | |||||| ||||||  ||| |||| || |||||||| | |||||||||||||  ||||||    
T  12006482 ttgttgtcatgtgactgaaaggtcacggggttcaagtc-tggaaacaacctcttatgtaaaaaatagggtaaggctccatacaatacaccaataatggtg 12006384  T
Q  96 ggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    ||||||||||||| || |||| ||||| |||||| |||| ||||| |||||||||    
T  12006383 ggaccccttcccagaccctgcctatgcgggagctttagtgcaccgtgttgccctt 12006329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19143094 - 19142987
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||| |||||| ||| |  || |||||||||||| |||||| |||||||| ||||| ||| ||||||||||||||| ||||||||||||||||||    
T  19143094 ttgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgtaaaaacagggtaaggctgcgtacagtacaccaaatggtgggac 19142995  T
Q  100 cccttccc 107  Q
    ||||||||    
T  19142994 cccttccc 19142987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 34074714 - 34074592
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    |||||||||  |||||||||||| ||  ||||||||||||||||||||||||  |||| |||||| ||||||| ||||| |||||||||||||||  ||     
T  34074714 ttgttgtcacatgactgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaaacacagtaaggttgcgttcaatacaccaaatggcaggg 34074615  T
Q  99 ccccttcccaaactctgcatatg 121  Q
    ||||||||||||| |||| ||||    
T  34074614 ccccttcccaaaccctgcgtatg 34074592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 2838761 - 2838867
Alignment:
Q  1 ttgttgtcatgtgactg-aaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| |||||| ||| | |||||||  ||||||||| |||||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  2838761 ttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtggga 2838860  T
Q  99 ccccttc 105  Q
     ||||||    
T  2838861 tcccttc 2838867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 13801895 - 13801767
Alignment:
Q  27 gggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacacca--aatggtgggaccccttcccaaactctgcatatgc 122  Q
    ||||||||||||| ||| ||||||||||| |||||  ||| |||||||||||||||||||||||  |||||||||||||||||||  || | ||||||||    
T  13801895 gggttcaagtcctggaagcagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 13801796  T
Q  123 aggagctctagtacaccgagttgcccttt 151  Q
      ||||| |||| ||||| ||||||||||    
T  13801795 gagagctttagtgcaccgggttgcccttt 13801767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22600437 - 22600545
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||||   | |||| ||||||| ||  |||||||| |||||||||||||||||||||||    
T  22600437 ttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggtaaggctgtgtacaatacaccaaatggtggga 22600536  T
Q  99 ccccttccc 107  Q
     ||||||||    
T  22600537 tcccttccc 22600545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 28516586 - 28516432
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaataca-ccaaatggtggg 97  Q
    ||||||||| ||| ||||||||| ||||||||||||| | |||||| |||||  |||| |||||||  || |||||||||||||||| | ||||||||||    
T  28516586 ttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctagggctgcgtacaatacatcaaaatggtggg 28516487  T
Q  98 accccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||| |||||| || ||||  ||||||||||| ||||  |||  |||||||||||    
T  28516486 acccattcccagaccctgcgcatgcaggagctttagtggaccaggttgccctttt 28516432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 7097870 - 7097772
Alignment:
Q  42 aaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacacc 139  Q
    |||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||| ||||||||||| ||| |||| ||||| |||||| |||| ||||    
T  7097870 aaacagcctcttgtgtaaaaacagggtaaggttgcgtacaatacaccaaatggtgagaccccttcccgaaccctgcgtatgcgggagctttagtgcacc 7097772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 22187268 - 22187422
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacacc--aaatggtgg 96  Q
    |||||||||| |||||||||||| || |||| ||||||| ||||||||||||||| ||||| | |   |||| ||||||||||||||||  |||   ||     
T  22187268 ttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaaacatgataagactgcgtacaatacaccaaaaacaatga 22187367  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||||||||||||| || |||||||||||||| |||| || |  ||||||||||    
T  22187368 gaccccttcccaaaccctacatatgcaggagctttagtgcatcaggttgcccttt 22187422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 209079 - 208972
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacacc-aaatggtggga 98  Q
    |||||||||||||||| |||||| ||  ||||||||||| | |||| |||||||| | ||||||| |||||||||| | ||||||||| |||||||||||    
T  209079 ttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgtaaaaacagggtaaggctgcattcaatacaccaaaatggtggga 208980  T
Q  99 ccccttcc 106  Q
    ||||||||    
T  208979 ccccttcc 208972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 20135627 - 20135740
Alignment:
Q  41 gaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaa--atggtgggaccccttcccaaactctgcatatgcaggagctctagtac 136  Q
    ||||||||||||||| ||||| | |  ||||||||||||||||||||||||  ||||||||||||||||||  || | |||||||||||||||  ||| |    
T  20135627 gaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggagcttcagtgc 20135726  T
Q  137 accgagttgccctt 150  Q
    |||| |||||||||    
T  20135727 accgggttgccctt 20135740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 43574617 - 43574719
Alignment:
Q  29 gttcaagtcctagaaacagcctcttgtata--aaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcagga 126  Q
    ||||||||||| ||||||  ||||||| ||  |||||| |||||||||||||||||| |||||||||||||||||||||||  || |||| ||||| |||    
T  43574617 gttcaagtcctggaaacaatctcttgtgtagaaaacagggtaaggctgcgtacaatataccaaatggtgggaccccttcccggaccctgcgtatgcggga 43574716  T
Q  127 gct 129  Q
    |||    
T  43574717 gct 43574719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31299615 - 31299705
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgta-taaaacagagtaaggctgcgtacaatacaccaaa 90  Q
    |||||||||||||||| | |||| ||  |||||||||||||||||||||||||||| |||||||| ||||  |||||||||||||| ||||    
T  31299615 ttgttgtcatgtgacttacaggtcactagttcaagtcctagaaacagcctcttgtattaaaacagtgtaaaactgcgtacaatacatcaaa 31299705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 39301106 - 39301215
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc-aaatggtggg 97  Q
    |||||||||||| |||||||||| ||||||||||||| | | |||| |||||  |||||||||||| |||||| |||||| ||| |||| ||| ||||||    
T  39301106 ttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgtataaaacagggtaaggatgcgtataatgcaccaaaaaggtggg 39301205  T
Q  98 accccttccc 107  Q
    ||||||||||    
T  39301206 accccttccc 39301215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 30006308 - 30006416
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaa--acagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||||||||| |  | |||||||||   ||||| |||||| ||||||  |||| ||||||||| ||||| ||||| |||||||||||    
T  30006308 ttgttgtcatgtgactgaaaggtcatagattcaagtccggaaaacaacctcttatataaacaacagggtaaggctgtgtacattacactaaatggtggga 30006407  T
Q  99 ccccttccc 107  Q
    |||||||||    
T  30006408 ccccttccc 30006416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 16957374 - 16957450
Alignment:
Q  76 gtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||||||||||||||||||||||||||||||  || |||| ||||| |||||| |||| ||||| |||||||||||    
T  16957374 gtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 16957450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 16880757 - 16880647
Alignment:
Q  43 aacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccg 140  Q
    ||||||||||||| |||||  ||| |||||||||||||||||||||||||||||| |||| ||||||  ||  ||| ||||| |||||| |||| |||||    
T  16880757 aacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcaccg 16880658  T
Q  141 agttgcccttt 151  Q
     ||| ||||||    
T  16880657 ggtttcccttt 16880647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 41425985 - 41426048
Alignment:
Q  53 tgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgc 116  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  41425985 tgtaaaaaacagggtaaggctgcatacaatacaccaattggtgggaccccttcccagactctgc 41426048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 23974763 - 23974840
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcg 76  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||| ||||| |||  |||||||||||    
T  23974763 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaagagggtaaggctgcg 23974840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 3771324 - 3771475
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||| ||| ||||||||||||| || |||| ||||| |  |||||| || |   | ||||||| ||||||||| | |||||||||||| ||||||||||    
T  3771324 ttgttctcacgtgactgaaaggtcacaggtttaagtcatgtaaacagtctgtgtaaaaaaacagggtaaggctgtgaacaatacaccaattggtgggacc 3771423  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||  ||||||  ||||  |||||| |||| ||||| | |||||||||    
T  3771424 ccttcccggactctgtgtatgtgggagctttagtgcaccgggctgccctttt 3771475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 156
Target Start/End: Complemental strand, 11657785 - 11657694
Alignment:
Q  66 gtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttttat 156  Q
    |||||||||| |||||||||||||| ||||||||||||||||| ||| ||||| | || ||| || |||| ||||| | |||||||||||||    
T  11657785 gtaaggctgcatacaatacaccaaaatggtgggaccccttcccgaaccctgcacacgcgggaactttagttcaccgggctgcccttttttat 11657694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 12477205 - 12477118
Alignment:
Q  67 taaggctgcgtacaatacaccaaa-tggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||||||||||||||||||| |||||||||||||||||  | ||||| |||||| ||||| |||| |||| |  ||||||||||    
T  12477205 taaggctgcgtacaatacaccaaaatggtgggaccccttcccggattctgcgtatgcaagagctttagtgcacccaactgcccttttt 12477118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 16028683 - 16028621
Alignment:
Q  92 ggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||||||||||  || |||||||||| ||||||||||| ||||| |||||||||||||    
T  16028683 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 16028621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 17419897 - 17419944
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagc 48  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  17419897 ttgttgtaatgtgactgaaaggttacgagttcaagtcctggaaacagc 17419944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 24323829 - 24323727
Alignment:
Q  29 gttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcagga 126  Q
    |||||||| || |||||| |||||||| |||||  ||| |||||  |||||| ||||| |||||| |||||||||||||||| || ||| |||||| |||    
T  24323829 gttcaagttctggaaacaacctcttgtgtaaaagacagggtaagcttgcgtataatactccaaatagtgggaccccttcccagaccctgtatatgcggga 24323730  T
Q  127 gct 129  Q
    |||    
T  24323729 gct 24323727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 24360453 - 24360351
Alignment:
Q  29 gttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcagga 126  Q
    |||||||| || |||||| |||||||| |||||  ||| |||||  |||||| ||||| |||||| |||||||||||||||| || ||| |||||| |||    
T  24360453 gttcaagttctggaaacaacctcttgtgtaaaagacagggtaagcttgcgtataatactccaaatagtgggaccccttcccagaccctgtatatgcggga 24360354  T
Q  127 gct 129  Q
    |||    
T  24360353 gct 24360351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 42924977 - 42924895
Alignment:
Q  10 tgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaa 90  Q
    |||||||||||||| ||| |||||||||||  ||||| | |||||| |||||  ||| |||||| ||||||||||||||||||    
T  42924977 tgtgactgaaaggtcacgagttcaagtcctgaaaacaacatcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaa 42924895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 9794471 - 9794389
Alignment:
Q  58 aaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccg 140  Q
    ||||||| ||||| |||| ||||||||||||||| |||||| |||||| || || | |||||||||| |||| |||| |||||    
T  9794471 aaaacagggtaagactgcatacaatacaccaaatagtgggatcccttcacagacccagcatatgcagaagctttagtgcaccg 9794389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10634298 - 10634248
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctc 51  Q
    ||||||||| ||||||||||||| | |||||||||||||||||||| ||||    
T  10634298 ttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaacctc 10634248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 29334418 - 29334487
Alignment:
Q  41 gaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacacca-aatggtgggaccccttccc 107  Q
    ||||||||||||||| ||||| | |  ||||||||||||||||||||||| ||||||||||||| |||||    
T  29334418 gaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccagaatggtgggacccattccc 29334487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 22025538 - 22025586
Alignment:
Q  13 gactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    ||||||||||| | ||||||||||||| ||||||||||||||| |||||    
T  22025538 gactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaa 22025586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 12575739 - 12575660
Alignment:
Q  73 tgcgtacaatacaccaaa-tggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||||||||||||| ||||||||||||||||   || |||| |||||||||||| | || ||||| | ||||||||    
T  12575739 tgcgtacaatacaccaaaatggtgggaccccttcctggaccctgcgtatgcaggagctttggtgcaccgggctgcccttt 12575660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 30877623 - 30877564
Alignment:
Q  92 ggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||||||||||||||  || |||||||||  ||||||||||| ||||| ||||||||||    
T  30877623 ggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcccttt 30877564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 3176840 - 3176803
Alignment:
Q  65 agtaaggctgcgtacaatacaccaaatggtgggacccc 102  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  3176840 agtaaggttgcgtacaatacaccaactggtgggacccc 3176803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 11462913 - 11462958
Alignment:
Q  104 tcccaaactctgcatatgcaggagctctagtacaccgagttgccct 149  Q
    |||| |||||||||||||| ||||||||||| ||||| ||||||||    
T  11462913 tcccgaactctgcatatgcgggagctctagtgcaccgggttgccct 11462958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 18698596 - 18698675
Alignment:
Q  3 gttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaata 83  Q
    ||||||| |||| |||| ||| |||||||||||| ||  ||||||||||||||| ||||||  ||| |||||| |||||||    
T  18698596 gttgtcacgtgattgaacggtcacgggttcaagtactgaaaacagcctcttgta-aaaacaaggtacggctgcatacaata 18698675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39079918 - 39079882
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtc 37  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  39079918 ttgttgtcatgtgacagaaaggtcacgggttcaagtc 39079882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10200 - 10052
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||    
T  10200 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacagagtaagactgcgtacaatacaccaaatagtgggacc 10101  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccct 149  Q
    |||||||  || |||||||||||||||||| ||| ||||| ||||||||    
T  10100 ccttcccggaccctgcatatgcaggagctccagtgcaccgggttgccct 10052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 20528 - 20380
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||    
T  20528 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacagagtaagactgcgtacaatacaccaaatagtgggacc 20429  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccct 149  Q
    |||||||  || |||||||||||||||||| ||| ||||| ||||||||    
T  20428 ccttcccggaccctgcatatgcaggagctccagtgcaccgggttgccct 20380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 30562 - 30714
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  30562 ttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgtaaaacagggtagggctgcgtacaatacaccaaatggtgggacc 30661  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||  || |||||||||| ||||||||||| ||||| ||||||||||||    
T  30662 ccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 30714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 6e-52; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 21779411 - 21779260
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| || |||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  21779411 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgtaaaacagggtaaggttgcgtacaatacaccaaatggtgggacc 21779312  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||  || |||||||||| ||||||||||| ||||| |||||||||||    
T  21779311 ccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 21779260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 8455468 - 8455315
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||    
T  8455468 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgtacaatacaccaaatggtggga 8455369  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||  || |||| ||||| |||||| |||| ||||| |||||||||||    
T  8455368 ccccttcccggaccctgcgtatgccggagctttagtgcaccgggttgccctttt 8455315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 23397749 - 23397899
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||    
T  23397749 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaatagggtaaggctacgtacaatacaccaaatggtgggacc 23397848  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||| |  || || ||||||| ||||||||||| ||||| ||||||||||    
T  23397849 ccttctcggaccctacatatgcgggagctctagtgcaccgggttgcccttt 23397899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 9671163 - 9671315
Alignment:
Q  1 ttgttgtcatgtgactg-aaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||| ||| || |||||||||| |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  9671163 ttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggac 9671262  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||||||  || |||| ||||| |||||| |||| ||||| |||||||||||    
T  9671263 cccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 9671315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 10546153 - 10546301
Alignment:
Q  9 atgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa---cagagtaaggctgcgtacaatacaccaaatggtgggaccccttc 105  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 10546252  T
Q  106 ccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||  || |||| ||||| |||||| |||| ||||| |||||||||||||    
T  10546253 ccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 10546301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 14530301 - 14530455
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||| |||||||| ||||||||||||||  ||||||||    
T  14530301 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgtacaatacaccaataatggtgg 14530400  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||||||  || |||| ||||| |||||| |||| ||||| ||||||||||    
T  14530401 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 14530455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 25249889 - 25249735
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtata-aaacagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||||| || |||||| |||||||||||||||||||||||||||||||||     
T  25249889 ttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgtacaaacagggtaaggctgcgtacaatacaccaaatggtgggat 25249790  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||| ||| |||| |||||  ||||| |||| ||||| |||||||||||||    
T  25249789 cccttcccgaaccctgcgtatgcgtgagctttagtgcaccgggttgccctttttt 25249735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 10543681 - 10543835
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc--aaatggtgg 96  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||  |||| ||||||| ||||||||||||||||||||||  |||||||||    
T  10543681 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgg 10543780  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||||||  || |||| ||||| |||||| |||| ||||| ||||||||||    
T  10543781 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10543835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12024070 - 12023963
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  12024070 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggac 12023971  T
Q  100 cccttccc 107  Q
    ||| ||||    
T  12023970 cccctccc 12023963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 11514419 - 11514571
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| |||||||||| |||| ||||||||||||  |||| |||||| ||||||||||||||||||||||||||||||||||    
T  11514419 ttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgtacaatacaccaaatggtggga 11514518  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
     ||||||||| || |||| ||||| |||||| |||| |||||  ||||||||||    
T  11514519 -cccttcccagaccctgcgtatgcgggagctttagtgcaccggattgccctttt 11514571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 99415 - 99282
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||||| |||    
T  99415 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtaaaaaacatggcaaggctgcgtacaatacaccaaatggtggaacc 99316  T
Q  101 ccttcccaaactctgcatatgcaggagctctagt 134  Q
    ||||| || || |||  ||||| |||||| ||||    
T  99315 ccttctcagaccctgtgtatgcgggagctttagt 99282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 14444720 - 14444871
Alignment:
Q  9 atgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggaccccttccc 107  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||| ||| ||||||||| |||| |||||||||||||||||||||||||||    
T  14444720 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgtgtacgatacaccaaatggtgggaccccttccc 14444819  T
Q  108 aaactctgcatatgcaggagctctagtacaccgagttgcccttttttattat 159  Q
      || |||| ||||| |||||| |||| ||||  ||||||||||||| ||||    
T  14444820 ggaccctgcgtatgcgggagctttagtgcaccaggttgccctttttttttat 14444871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 21377225 - 21377072
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||| |||||  |||| ||||||| ||||||||| ||||||| |||||||||||||||    
T  21377225 ttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggtaaggctgggtacaatgcaccaaatggtggga 21377126  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    ||||||||| ||| |||| ||||  |||||| | || ||||||| ||||||||||    
T  21377125 ccccttcccgaaccctgcgtatgtgggagct-ttgtgcaccgagctgcccttttt 21377072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22371040 - 22371145
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||||||||||||||  |||| ||||||||||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  22371040 ttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctcgtgta-aaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 22371138  T
Q  101 ccttccc 107  Q
    |||||||    
T  22371139 ccttccc 22371145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 5841011 - 5841166
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||| |  |||| |||| || |||||| ||||||||||||| ||  ||||||||    
T  5841011 ttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaaggatgcgtacaatacatcaataatggtgg 5841110  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||||  || | |||||||| |||||| |||| |||||||||||||||||    
T  5841111 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgccctttt 5841166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 17667985 - 17668141
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||| | |||||||| |||||  ||| ||||||||||||||||||||||||||||||| |    
T  17667985 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaatggtggaa 17668084  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    ||||||| | ||| |||| |||   |||||| |||| ||||| ||||||||||||||    
T  17668085 ccccttctcgaaccctgcgtatatgggagctttagtgcaccgggttgccctttttta 17668141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 25079870 - 25079717
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa---cagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||||||||||||||| ||||| ||||||||||||| |||||||| |||||||| |||||   ||  |||||| ||||||||||||||| |||||||||    
T  25079870 ttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaaacaaggtaaggatgcgtacaatacaccgaatggtggg 25079771  T
Q  98 accccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||||||||  || |||| |||||| ||||| |||| ||||| ||||||||||    
T  25079770 accccttcccggaccctgcgtatgcaagagctttagtgcaccgggttgcccttt 25079717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 17623547 - 17623703
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||| ||||| ||||| ||||||||||||||| |||||| |||||||| |||||  ||| ||||||||||||||||||||||||||||||| |    
T  17623547 ttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaatggtggaa 17623646  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    ||||||||| ||  |||| ||||  | |||| |||| ||| | ||||||||||||||    
T  17623647 ccccttcccgaatcctgcgtatgtggaagctttagtgcactgggttgccctttttta 17623703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 17896242 - 17896397
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaaca---gagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||| |||||||| ||||| |   | |||||||||||||||||| |||||||||||||    
T  17896242 ttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaaggctgcgtacaatataccaaatggtggg 17896341  T
Q  98 accccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||| |  || |||| ||||  |||||| |||| || |||||||||||||||    
T  17896342 accccttctcggaccctgcgtatgtgggagctttagtgcatcgagttgcccttttt 17896397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 24200777 - 24200622
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc--aaatggtgg 96  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||  |||| ||||||| ||||||||||||||||||||||  |||||||||    
T  24200777 ttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgg 24200678  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    || ||||||||  || |||  ||||   ||||| |||| ||||| |||||||||||    
T  24200677 gaacccttcccggaccctgagtatgtgagagctttagtgcaccgggttgccctttt 24200622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 154
Target Start/End: Original strand, 36871509 - 36871629
Alignment:
Q  34 agtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctcta 132  Q
    |||||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||  || |||| ||||| |||||| ||    
T  36871509 agtcctggaaacagcctcttgtgtgaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggac-ctgcgtatgcgggagcttta 36871607  T
Q  133 gtacaccgagttgccctttttt 154  Q
    || ||||| |||||||||||||    
T  36871608 gtgcaccgggttgccctttttt 36871629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 44643511 - 44643659
Alignment:
Q  7 tcatgtgactgaaaggttacgggttcaagtcctagaaacagcctctt--gt-ataaaacagagtaaggctgcgtacaatacaccaaatggtgggacccct 103  Q
    ||||||||||||||||| ||| |||||||| ||||||| ||||||||  || | |||||||||||||||||||||||||  |||||||||||||||||||    
T  44643511 tcatgtgactgaaaggtcacgtgttcaagttctagaaagagcctcttccgtaaaaaaacagagtaaggctgcgtacaatgtaccaaatggtgggacccct 44643610  T
Q  104 tcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||| || |||| ||||| |||||  |||| ||||| | |||||||||    
T  44643611 tcccagaccctgcgtatgcgggagccttagtgcaccgggctgccctttt 44643659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 5450268 - 5450376
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt---ataaaacagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||| ||||||||   | ||||||  ||||||||||||||||||||||||| ||||||    
T  5450268 ttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggtaaggctgcgtacaatacaccaaagggtggg 5450367  T
Q  98 accccttcc 106  Q
    |||||||||    
T  5450368 accccttcc 5450376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 25641487 - 25641592
Alignment:
Q  3 gttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggaccc 101  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| | |||| | ||||||| |||| | ||||||||||||||||||| |||||||||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcattttgtgtgaaaacagggtaaagttgcgtacaatacaccaaattgtgggaccc 25641586  T
Q  102 cttccc 107  Q
    ||||||    
T  25641587 cttccc 25641592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 27573604 - 27573757
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtata-aaacagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||||||||| |  |||||||||||  | ||||||||||||| || |||||  ||||||||||||||||||||||||||||||| ||    
T  27573604 ttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttgtgtataaacatggtaaggctgcgtacaatacaccaaatggtggaac 27573703  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |  ||||||||| |||  ||||  |||||| |||| || || ||||||||||||    
T  27573704 catttcccaaaccctgtgtatgtgggagctttagtgcatcgggttgcccttttt 27573757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 19614981 - 19615116
Alignment:
Q  7 tcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacacca--aatggtgggacccc 102  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||||||  ||||||| ||||| |||||||||||| ||||  ||| || |||||||    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaatataccaataatagt-ggacccc 19615079  T
Q  103 ttcccaaactctgcatatgcaggagctctagtacacc 139  Q
    ||||| ||| |||| |||||||||||| |||| ||||    
T  19615080 ttcccgaaccctgcgtatgcaggagctttagtgcacc 19615116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19977866 - 19977758
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctc--ttgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||| ||||||| |||||||||||| || |||||||||||  ||||| |||| ||  ||||| ||||||||||||||||||||||||||    
T  19977866 ttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataaggttgcgtacaatacaccaaatggtggga 19977767  T
Q  99 ccccttccc 107  Q
     ||||||||    
T  19977766 tcccttccc 19977758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4516503 - 4516395
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||| ||||||||||||| ||   ||||||| |||||||||||||||||| |||||  ||| | || ||||||||||||||||||| ||||||||    
T  4516503 ttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaaacagggcaacgctgcgtacaatacaccaattggtggga 4516404  T
Q  99 ccccttccc 107  Q
    |||||||||    
T  4516403 ccccttccc 4516395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 40417023 - 40416871
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| ||||||||||||| | |||||| ||||||||||  ||||||| | ||||||| |||||||||||||| || |||||    
T  40417023 ttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctgtgtacaatacaccaattgatggga 40416924  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||| ||     || ||||||||||  ||||| |||| ||||| ||||||||||    
T  40416923 cccttttttggaccctgcatatgcgagagctttagtgcaccgggttgcccttt 40416871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 45235970 - 45235811
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaaca---gagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||| ||||||||||||||| | ||| ||||||||||||||||||| ||||| | ||||| |   | |||||||| |||  ||||||| ||||||||||    
T  45235970 ttgttctcatgtgactgaaagatcacgagttcaagtcctagaaacagtctcttctgtaaaataatagggtaaggctacgtgtaatacacaaaatggtggg 45235871  T
Q  98 accccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttttatt 157  Q
    ||||||| ||| || || | |||||||||||| ||||  ||| |||||||| ||||||||    
T  45235870 accccttaccagaccctacgtatgcaggagctttagtgtaccaagttgcccctttttatt 45235811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 31158593 - 31158451
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttg--tataaaacagagtaaggctgcgtacaatacaccaaa--tggtgg 96  Q
    ||||||||||||||||||||||| | ||||| ||||| |  |||||||||||||  || ||||||| |||||  ||| ||||||| ||||||  ||||||    
T  31158593 ttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaaacagggtaagattgcatacaataaaccaaaaatggtgg 31158494  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacacc 139  Q
    |||||||||||| || |||| ||||| |||||| |||||||||    
T  31158493 gaccccttcccagaccctgcgtatgcgggagctttagtacacc 31158451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 39914458 - 39914305
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa---cagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||||||||||||||| ||||| ||||| |||||| || |||||| |||||||| |||||   ||| |||||| || |||||||||||| |||||||||    
T  39914458 ttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaaacagggtaaggatgtgtacaatacaccgaatggtggg 39914359  T
Q  98 accccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||||| ||  || |||| ||||| |||||| |||| || || |||||||||||    
T  39914358 acccctt-cctgaccctgcgtatgcgggagctttagtgcatcgggttgccctttt 39914305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 23145840 - 23145742
Alignment:
Q  11 gtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggaccccttccc 107  Q
    ||||||||||||| ||||||||||||| |  |||||| ||||||| |||||  ||| |||||||||||||||||||||||| ||||||||||| |||||    
T  23145840 gtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaattggtgggaccctttccc 23145742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 23557630 - 23557532
Alignment:
Q  11 gtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggaccccttccc 107  Q
    ||||||||||||| ||||||||||||| |  |||||| ||||||| |||||  ||| |||||||||||||||||||||||| ||||||||||| |||||    
T  23557630 gtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaattggtgggaccctttccc 23557532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17380388 - 17380282
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtata-aaacagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||| ||||||| ||||||||||||| | |||||| |||||||| || |||||| |||||| || || |||||||||||||| ||| ||    
T  17380388 ttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaacagggtaaggttgtgtgcaatacaccaaatgatggaac 17380289  T
Q  100 cccttcc 106  Q
    |||||||    
T  17380288 cccttcc 17380282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 17705478 - 17705567
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataa--aacagagtaaggctgcgtacaatacacca 88  Q
    ||||||||||||||||  ||||| ||||||||||||||| ||||| ||||||||| |||  ||||||||||||||| |||||||||||||    
T  17705478 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaacaacagagtaaggctgtgtacaatacacca 17705567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 24860138 - 24859985
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||| ||||||||||||| ||| ||| |||||| ||||| || ||||| ||  ||| ||||||||||||||||||||||||| | ||    
T  24860138 ttgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgtaaaaacatggta-ggctgcgtacaatacaccaaatggtagaac 24860040  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||| |  || |||| ||||| |||||| |||| |||||  ||||| ||||||    
T  24860039 cccttctcggaccctgcgtatgcgggagctttagtgcaccggattgccttttttt 24859985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 31821491 - 31821390
Alignment:
Q  3 gttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacccc 102  Q
    ||||| ||||||||||||||| ||| ||||||||| |||||||||||   |||| |||| || |||||| || ||||||||||||||||| |||||||||    
T  31821491 gttgttatgtgactgaaaggtcacgagttcaagtcgtagaaacagccgtgtgtaaaaaatagggtaaggttgtgtacaatacaccaaatgatgggacccc 31821392  T
Q  103 tt 104  Q
    ||    
T  31821391 tt 31821390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 32781426 - 32781310
Alignment:
Q  15 ctgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaact 112  Q
    ||||||||| ||| |||||||||   |||||| |||||||| |||||  ||| ||||| ||||||||||||||||||||||||||||||||||||| ||     
T  32781426 ctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcccagacc 32781327  T
Q  113 ctgcatatgcaggagct 129  Q
    |||  ||||| ||||||    
T  32781326 ctgtgtatgcgggagct 32781310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 7214517 - 7214604
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaa--acagagtaaggctgcgtacaatacac 86  Q
    ||||||||||||||||||||||| | ||||||||||| | ||||||| ||||||| ||||  |||| |||||||||||||||||||||    
T  7214517 ttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgtacaatacac 7214604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 33795268 - 33795398
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctctt--gtataaaacagagtaaggctgcgtac-aatacaccaaatggtggg 97  Q
    ||||||||| |||| |||||||| ||||||||||||||  |||||| ||||||  ||| ||||||| |||||||||||||| ||||||||  ||||||||    
T  33795268 ttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgtacaaatacacc-tatggtggg 33795366  T
Q  98 accccttcccaaactctgcatatgcaggagct 129  Q
    ||||||||||| || |||  ||||| ||||||    
T  33795367 accccttcccagaccctgtgtatgcgggagct 33795398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 14544046 - 14544201
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat---aaaacagagtaaggctgcgtacaata--caccaaatggtg 95  Q
    |||||||||||||||||||||||||| ||| || || || ||||||||||||||| |   ||||||| ||||| |||||| |||||  ||  |||||||     
T  14544046 ttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctcttgtgtagaaaaacagggtaagactgcgtgcaataaccaaaaaatggtc 14544145  T
Q  96 ggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||||||   || |||| ||||| |||||| |||| |||| |||||||||||    
T  14544146 ggaccccttccgggaccctgcgtatgcgggagctttagtgcaccaagttgcccttt 14544201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 151
Target Start/End: Original strand, 25632546 - 25632644
Alignment:
Q  53 tgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||| |||||||  ||||||||||||||||||||||||||||||||  ||||||| |||  | | ||||| |||||| |||| ||||| ||||||||||    
T  25632546 tgtaaaaaacaggataaggctgcgtacaatacaccaaatggtgggattccttcccgaaccttacgtatgcgggagctttagtgcaccgggttgcccttt 25632644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 40762346 - 40762234
Alignment:
Q  41 gaaacagcctcttgtataaaaca--gagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacac 138  Q
    ||||||||||||||| ||||| |  | |||||||| ||||||||||||||||||||||||||| ||||   || |||| ||||  |||||| |||| |||    
T  40762346 gaaacagcctcttgtgtaaaaaactgggtaaggctacgtacaatacaccaaatggtgggaccctttcctggaccctgcgtatgtgggagctttagtgcac 40762247  T
Q  139 cgagttgcccttt 151  Q
    || ||||||||||    
T  40762246 cgggttgcccttt 40762234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 24890461 - 24890529
Alignment:
Q  66 gtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagt 134  Q
    |||||||||| ||||||||||||| |||||||||||||||||  || |||| |||||||||||| ||||    
T  24890461 gtaaggctgcatacaatacaccaattggtgggaccccttcccggaccctgcgtatgcaggagctttagt 24890529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 44449529 - 44449427
Alignment:
Q  7 tcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacacc-aaatggtgggacccct 103  Q
    |||||| |||||||||| ||| |||||| ||||| ||||| ||||||| ||  |||||||  ||||||||||||||||||||| |||| |||||||||||    
T  44449529 tcatgtaactgaaaggtcacgagttcaa-tcctaaaaacaacctcttgaatgaaaaacaggataaggctgcgtacaatacaccaaaatagtgggacccct 44449431  T
Q  104 tccc 107  Q
    ||||    
T  44449430 tccc 44449427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 29420041 - 29419946
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cag----agtaaggctgcgtacaatacaccaaa 90  Q
    |||||||||  |||||||||||| ||| ||||||||||| |||||| |||||||| |||||  |||    ||||||||||||||||||||||||||    
T  29420041 ttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagtaaggctgcgtacaatacaccaaa 29419946  T

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Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 30826060 - 30826158
Alignment:
Q  41 gaaacagcctcttgtataaaac-agagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacacc 139  Q
    ||||||||||||||| |||||  || |||||| |||||||||||||||||||||| ||| ||||||||| || || ||||||| |||||| |||| ||||    
T  30826060 gaaacagcctcttgtgtaaaaatagggtaaggttgcgtacaatacaccaaatggt-ggaacccttcccagaccctacatatgcgggagctttagtgcacc 30826158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 26684774 - 26684642
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacag-cctcttgtataaaacaga---gtaaggctgcgtacaatacaccaaatggtgg 96  Q
    |||||||||||||| |||||||| |  |||| |||||||  |||||| |||||||| ||||| |     |||||||||||||||||| || |||||||||    
T  26684774 ttgttgtcatgtgattgaaaggtcaaaggtttaagtcctgaaaacagacctcttgtgtaaaaaaatatggtaaggctgcgtacaatatactaaatggtgg 26684675  T
Q  97 gaccccttcccaaactctgcatatgcaggagct 129  Q
    |||| |||||| ||| |||| ||||| ||||||    
T  26684674 gacctcttcccgaaccctgcgtatgcgggagct 26684642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 2003678 - 2003592
Alignment:
Q  12 tgactgaaaggttacgggttcaagtcctagaaacagcctcttg---tataaaacagagtaaggctgcgtacaatacaccaaatggtg 95  Q
    |||||||||||| |||||| |||||||| ||||||||| ||||    | ||||||| |||||| ||||||||||||| |||||||||    
T  2003678 tgactgaaaggtcacgggtacaagtcctggaaacagccccttgcgtaaaaaaacagggtaaggatgcgtacaatacaacaaatggtg 2003592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44604837 - 44604897
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    ||||||||||||||||| ||||| || |||||||||||| |||||| |||||||| |||||    
T  44604837 ttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaa 44604897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 44521525 - 44521395
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||| ||| ||||||||||||| ||| |||||| || | ||||||  ||||||| ||||| | |  |||||||||| || |||||||||||||| ||||    
T  44521525 ttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctcttgtgtaaaaaacaaggtaaggctgcatataatacaccaaatggcggga 44521426  T
Q  99 ccccttcccaaactctgcatatgcaggagct 129  Q
     ||||||||| ||  ||||||| | ||||||    
T  44521425 gcccttcccagacattgcatatacgggagct 44521395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 13245180 - 13245139
Alignment:
Q  66 gtaaggctgcgtacaatacaccaaatggtgggaccccttccc 107  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  13245180 gtaaggctgcgtacattacactaaatggtgggaccccttccc 13245139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 31523296 - 31523349
Alignment:
Q  81 atacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagt 134  Q
    |||||||||||||||| |||| ||||||||| |||||||||| |||||| ||||    
T  31523296 atacaccaaatggtggaaccctttcccaaaccctgcatatgcgggagctttagt 31523349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 12315787 - 12315697
Alignment:
Q  17 gaaaggttacgggttcaagtcctagaaacagcctcttgt-ataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcc 106  Q
    ||||||| ||| ||||||||| | |||||||| |||| | | ||||||| ||||| ||| |||||||||||||||| ||| ||| ||||||    
T  12315787 gaaaggtcacgagttcaagtcatggaaacagcttcttattaaaaaacagggtaagactgtgtacaatacaccaaatagtgagactccttcc 12315697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 15296533 - 15296468
Alignment:
Q  27 gggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaa 90  Q
    ||||||||||||  |||||||||| |||| |||||  ||| |||||||||||||||||| ||||||    
T  15296533 gggttcaagtcccggaaacagcctgttgtgtaaaatacagggtaaggctgcgtacaatataccaaa 15296468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 30864528 - 30864446
Alignment:
Q  41 gaaacagcctcttgtataaaac-agagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgc 122  Q
    ||||||||||||||| |||||  || |||||| ||||||||||| ||||||||||  || || ||||||||| |||| |||||    
T  30864528 gaaacagcctcttgtgtaaaaatagggtaagggtgcgtacaatataccaaatggtaagatcctttcccaaaccctgcgtatgc 30864446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 34080176 - 34080237
Alignment:
Q  91 tggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||||||||||  || |||||||||| |||| | |||| ||||| |||||||||||    
T  34080176 tggtgggaccccttcccggaccctgcatatgcgggagttttagtgcaccgggttgccctttt 34080237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 17471544 - 17471674
Alignment:
Q  14 actgaaaggttacgggttcaagtcctagaaacagcctcttgt---ataaaacagagtaaggctgcgtacaatacacc-aaatggtgggaccccttcccaa 109  Q
    ||||||| || || ||||||||||  ||||||||||||||||   | |||||||  |||| |||||||||||| ||| ||||| || |||||||||||      
T  17471544 actgaaatgtcacaggttcaagtctcagaaacagcctcttgtgtaaaaaaacaggataagactgcgtacaatataccaaaatgatgagaccccttccctg 17471643  T
Q  110 actctgcatatgcaggagctctagtacaccg 140  Q
    || |||| ||||| |||| | |||| |||||    
T  17471644 accctgcctatgcgggagttttagtgcaccg 17471674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 41409936 - 41410000
Alignment:
Q  90 atggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||||||||||||  || |||||||||| ||||||  ||| ||||| |||||||| ||||    
T  41409936 atggtgggaccccttcccggaccctgcatatgcgggagcttcagtgcaccgggttgccctctttt 41410000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 1217095 - 1217247
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||| ||||||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  1217095 ttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggcgggacc 1217194  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||  || |||||||||| ||||||||||| ||||| ||||||||||||    
T  1217195 ccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 1217247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 22123067 - 22122909
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  22123067 ttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 22122968  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttttattat 159  Q
    |||||||  || ||||||||||  |||||||||| ||||| ||||||||| ||| ||||    
T  22122967 ccttcccggaccctgcatatgcgagagctctagtgcaccgggttgcccttattttttat 22122909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 39203521 - 39203671
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  39203521 ttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgtaaaacagggtaaggttgcgtacaatacaccaaatggtgggacc 39203620  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    |||||||  ||  ||||||||| |||||| |||| ||||| ||||||||||    
T  39203621 ccttcccggaccttgcatatgcgggagctttagtgcaccgggttgcccttt 39203671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 31592877 - 31593004
Alignment:
Q  24 tacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgca 123  Q
    |||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||  || ||||||||||     
T  31592877 tacgggttcaagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggactccttcccggaccctgcatatgcg 31592976  T
Q  124 ggagctctagtacaccgagttgcccttt 151  Q
    ||||||||||| ||||| ||||||||||    
T  31592977 ggagctctagtgcaccgggttgcccttt 31593004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 40272964 - 40272807
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| | ||||||||||||| |||||| |||||||| |||||  ||| |||||||||||||||||||||||||||||||||    
T  40272964 ttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtggga 40272865  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttttat 156  Q
    |||||||||  || |||| ||||| |||||| |||| ||||| |||||||||||||||    
T  40272864 ccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttttat 40272807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 13628944 - 13628789
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtata--aaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||  |||||| |||||||||||||||||||||||  ||||||||    
T  13628944 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgg 13628845  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||||  || |||| ||||| |||||| |||| ||||| |||||||||||    
T  13628844 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 13628789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 13730756 - 13730599
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||  |||| ||||||| ||||||||| |||||||||||||  ||||||||    
T  13730756 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgg 13730657  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||||||  || | |||||||| |||||| |||| ||||| |||||||||||||    
T  13730656 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 13730599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 22609771 - 22609921
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||| ||||| ||||||||||||| | ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  22609771 ttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggac 22609870  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    ||||||||  ||  ||| ||||| ||||||  ||| ||||| |||||||||    
T  22609871 cccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 22609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 26869712 - 26869866
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||||||| || ||||| ||| ||||||||||||||||||||||||||||||||||    
T  26869712 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggac 26869811  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||| ||  ||  ||| ||||| |||||| | || ||||| |||||||||||||    
T  26869812 cccttgccggaccatgcgtatgcgggagctttggtgcaccgggttgccctttttt 26869866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 29366874 - 29366719
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    |||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||  ||||||| |||||||||||||||||||||||  ||||||||    
T  29366874 ttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgg 29366775  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||||  || |||| ||||  |||||| |||| ||| | |||||||||||    
T  29366774 gaccccttcccggaccctgcgtatgtgggagctttagtgcactgggttgccctttt 29366719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 15797271 - 15797383
Alignment:
Q  45 cagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagtt 144  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||  ||||||||||| ||||| |||    
T  15797271 cagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggtt 15797370  T
Q  145 gcccttttttatt 157  Q
    |||||||||||||    
T  15797371 gcccttttttatt 15797383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 16735446 - 16735598
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||| || || ||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||    
T  16735446 ttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgtagaaaaacagggtaaggctgcgtacaatacaccaaatggtgggac 16735545  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||||||  || |||| ||||| | ||||  ||| ||| | |||||||||||    
T  16735546 cccttcccggacactgcgtatgcggtagcttcagtgcactgggttgccctttt 16735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 7697037 - 7696893
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||||||     ||    
T  7697037 ttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatgg-----cc 7696943  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctt 150  Q
    |||||||  || |||||||||  ||||||||||| ||||| ||| |||||    
T  7696942 ccttcccggacactgcatatgtgggagctctagtgcaccgggtttccctt 7696893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 46421189 - 46421031
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||||||||  |||| ||||||| |||||||||||||||||||||||  ||||||||    
T  46421189 ttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgg 46421090  T
Q  97 gaccccttcccaaactctgcatatgcaggagctct-agtacaccgagttgccctttttt 154  Q
    |||||||||||  || |||| ||||| |||||| | ||| |||||  ||||||||||||    
T  46421089 gaccccttcccggaccctgcgtatgcgggagctttaagtgcaccggtttgccctttttt 46421031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 52926362 - 52926216
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||       ||||||||||||||||||||||||||||||||||     
T  52926362 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta-------gtaaggctgcgtacaatacaccaaatggtgggaca 52926270  T
Q  101 ccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||  || |||| ||||| |||||| |||  ||||| |||||||||||||    
T  52926269 ccttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctttttt 52926216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 12914187 - 12914034
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||| ||||||| ||||||| ||  ||||||||||| ||||||||||||||| |||||  ||| ||||||| |||||||||||||||||||||| ||    
T  12914187 ttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggcgtacaatacaccaaatggtgaga 12914088  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||| || |||||||||| ||||||  | | ||||| |||||||||||    
T  12914087 ccccttcccagaccctgcatatgcgggagcttcaatgcaccgggttgccctttt 12914034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 153
Target Start/End: Original strand, 516417 - 516571
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc---aaatggtggga 98  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||  |||| ||||||| ||||||||||| |||||| |||   |||||| ||||    
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaataaaccaaaaaatggcggga 516516  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||||  || |||| ||||| |||||| |||| ||||| ||||||||||||    
T  516517 ccccttccccgaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 516571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 8247841 - 8247709
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||  |||| ||||||| |||||| ||||||||||||||||  ||||||||    
T  8247841 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgg 8247742  T
Q  97 gaccccttcccaaactctgcatatgcaggagct 129  Q
    ||| |||||||  || |||| ||||| ||||||    
T  8247741 gactccttcccggaccctgcgtatgcgggagct 8247709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 34420796 - 34420687
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc-aaatggtggg 97  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||  |||| ||||||| |||||||||||||| ||||||| ||||||||||    
T  34420796 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtaccatacaccaaaatggtggg 34420697  T
Q  98 accccttccc 107  Q
    ||||||||||    
T  34420696 accccttccc 34420687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 6411973 - 6411832
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    |||||||||||| ||||| |||| | ||||||||||| |  |||||||||||||| ||||| ||| ||||||||||||||||||||||||||| ||||||    
T  6411973 ttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatgatgggac 6411874  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccga 141  Q
    ||||||||| ||  ||| ||||| |||||| |||| ||||||    
T  6411873 cccttcccagaccttgcgtatgcgggagctttagtgcaccga 6411832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 26573132 - 26573240
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctc--ttgtataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||   |||| ||||||| |||||||||||||||||||||||| ||||||||    
T  26573132 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgtacaatacaccaattggtggga 26573231  T
Q  99 ccccttccc 107  Q
    |||| ||||    
T  26573232 ccccatccc 26573240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 5173872 - 5173717
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacacc--aaatggtggg 97  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| | |||||| ||||||| ||| | |||||||||  ||||||||||    
T  5173872 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaacaaagtaaggttgcatgcaatacaccaaaaatggtggg 5173773  T
Q  98 accccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
     |||||||||  ||  ||| ||||| |||||| |||| ||||| ||||||||||||    
T  5173772 gccccttcccggaccttgcgtatgcgggagctttagtgcaccgggttgcccttttt 5173717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 9607208 - 9607346
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctctt--gtataaaacagagtaaggctgcgtacaatacacca--aatggtgg 96  Q
    ||||||||||||||||||||||| |  |||||||||||| |||||||||||||  ||| ||||||| ||||||||||||| |||||||||  |||| |||    
T  9607208 ttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtagaatacaccaataatgttgg 9607307  T
Q  97 gaccccttcccaaactctgcatatgcaggagctctagta 135  Q
    |||||||||||| || | |||||||| |||||| |||||    
T  9607308 gaccccttcccagaccccgcatatgcgggagctttagta 9607346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 34771458 - 34771362
Alignment:
Q  57 taaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||| ||||||||||| ||||| | ||||||||||    
T  34771458 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgcccttttt 34771362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 7942995 - 7943150
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttg--tataaaacagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| |||| |||||||||| |||||||| |||||  || ||||||| ||||| |||||||||||||| ||||||||||||    
T  7942995 ttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgtacaatacatcaaatggtggga 7943094  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
     ||||| ||| ||  ||| ||||| |||||| |||| ||| | |||||| ||||||    
T  7943095 tccctttccagaccatgcgtatgcgggagctttagtgcactgggttgccttttttt 7943150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 53996718 - 53996563
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc-aaatggtggg 97  Q
    |||||||||| |||||||||||| ||| ||||||||| | |||||| |||||  |||| ||||||| |||||||||| ||||||||||| ||||||||||    
T  53996718 ttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggctgcttacaatacaccaaaatggtggg 53996619  T
Q  98 accccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    ||||||||||  || |||| ||||  |||||| |||| ||||| | ||||||||||    
T  53996618 accccttccctgacactgcgtatgtgggagctttagtgcaccgggctgcccttttt 53996563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4495816 - 4495714
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| |||||||||||||||  ||| ||||| |||| |||||  ||| |||||||||||||||||||||||||||||||||    
T  4495816 ttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtggga 4495717  T
Q  99 ccc 101  Q
    |||    
T  4495716 ccc 4495714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45620981 - 45620881
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt---ataaaacagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||||||| ||||||||||||| |||||||||||| || |||||||||||||||   | ||||||| |||||||||||||||||||||||| |||||||    
T  45620981 ttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaattggtggg 45620882  T
Q  98 a 98  Q
    |    
T  45620881 a 45620881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 54484730 - 54484850
Alignment:
Q  36 tcctagaaacagcctcttgtataaaa---cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctcta 132  Q
    |||| ||||||||||||||| |||||   ||  ||||||||||||||||||||||||||||||||||||||||||  || |||| ||||| |||||| ||    
T  54484730 tcctggaaacagcctcttgtgtaaaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 54484829  T
Q  133 gtacaccgagttgcccttttt 153  Q
    || ||||| ||||||||||||    
T  54484830 gtgcaccgggttgcccttttt 54484850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 33926094 - 33926195
Alignment:
Q  7 tcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacacca-aatggtgggacccctt 104  Q
    ||||||||||||||||| | ||||||||||||| |||| |||||||||| | ||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  33926094 tcatgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaaaaacagggtaaggctgtgtacaatacaccataatggtgggacccctt 33926193  T
Q  105 cc 106  Q
    ||    
T  33926194 cc 33926195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 30928296 - 30928177
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccc 101  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||  |||| ||||||  |||||| || ||| |||||||||| ||| |||||||    
T  30928296 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgtgtaaaatacaccaattggcgggaccc 30928197  T
Q  102 cttcccaaactctgcatatg 121  Q
    ||||||  || |||||||||    
T  30928196 cttcccggaccctgcatatg 30928177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10870103 - 10870025
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgta 78  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||    
T  10870103 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgta 10870025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 19731007 - 19731148
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||| |||| |||||||| |||| | |||||||| |||| |||||||||| ||||| | |  |||||| ||||||||||||||| | ||||||||    
T  19731007 ttgttgtcacgtgattgaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacacctattggtggga 19731106  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccg 140  Q
    ||| |||||| ||||||  |||||||||||| |||| |||||    
T  19731107 ccctttcccagactctgtgtatgcaggagctttagtgcaccg 19731148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 8411016 - 8410899
Alignment:
Q  2 tgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccc 101  Q
    |||||||||| ||||||||||| || |||||| ||||| ||||| ||||| |||| ||||||| ||||||||||  |||||||||||| ||||||||||     
T  8411016 tgttgtcatgggactgaaaggtcaccggttcaggtcctggaaactgcctcgtgtaaaaaacagggtaaggctgctcacaatacaccaactggtgggacct 8410917  T
Q  102 cttcccaaactctgcata 119  Q
    |||| || || |||||||    
T  8410916 cttctcagaccctgcata 8410899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 14986989 - 14987116
Alignment:
Q  28 ggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacacca--aatggtgggaccccttcccaaactctgcatatgca 123  Q
    |||||||||||| ||||||||||||||| |||||  ||| |||||||||||||||||||||||  ||||||||||||| |||||  ||  |||||||||     
T  14986989 ggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcg 14987088  T
Q  124 ggagctctagtacaccgagttgcccttt 151  Q
    |||||| |||| ||||| ||| ||||||    
T  14987089 ggagctttagtgcaccgggtttcccttt 14987116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 54032705 - 54032609
Alignment:
Q  7 tcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccc 101  Q
    ||||||||||| ||||| ||||||||||||||| |||||| |||||  |||| ||||||| |||||||||| ||||||||||| |||||||||||||    
T  54032705 tcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccgaatggtgggaccc 54032609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 54374488 - 54374340
Alignment:
Q  11 gtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaa-tggtgggaccccttccc 107  Q
    ||||||||||||| || |||||||||| | |||||| |||||||| ||||| | ||  |||||||||||||||| ||||||| |||||||||||||||||    
T  54374488 gtgactgaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgtacaatccaccaaaatggtgggaccccttccc 54374389  T
Q  108 aaactctgcatatgcaggagctctagtacaccgagttgcccttttttat 156  Q
      || |||||||||| |||||| |||| ||||  | |||| ||||||||    
T  54374388 ggaccctgcatatgcgggagctttagttcaccaggctgccattttttat 54374340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 10795553 - 10795423
Alignment:
Q  25 acgggttcaagtcctagaaacagcctcttgtataaa--acagagtaaggctgcgtacaatacacc--aaatggtgggaccccttcccaaactctgcatat 120  Q
    ||||||||||||||| ||||||||||||||| ||||  |||| ||||||||||||||||||||||  |||||||||||||||||||   || |||| |||    
T  10795553 acgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtat 10795454  T
Q  121 gcaggagctctagtacaccgagttgcccttt 151  Q
    || ||||||  ||| ||||  ||||||||||    
T  10795453 gcgggagcttcagtgcaccaggttgcccttt 10795423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 49013587 - 49013469
Alignment:
Q  41 gaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaa--atggtgggaccccttcccaaactctgcatatgcaggagctctagtac 136  Q
    ||||||||||||||| |||||  ||| ||||||||||||||||||||||||  ||||||||||||||||||  || | ||||| || |||||| |||| |    
T  49013587 gaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagctttagtgc 49013488  T
Q  137 accgagttgccctttttta 155  Q
    |||| ||||||||||||||    
T  49013487 accgggttgccctttttta 49013469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 829567 - 829453
Alignment:
Q  29 gttcaagtcctagaaacagcctcttgtataaa--acagagtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccaaactctgcatatgcagg 125  Q
    |||||||| ||||||||| |||||||| ||||  ||| ||||| | |||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||    
T  829567 gttcaagttctagaaacaacctcttgtctaaagaacatagtaaagttgcgtacaatacaccaaaatggtgggaccccttcccgaaccctgcgtatgcagg 829468  T
Q  126 agctctagtacaccg 140  Q
    |||| |||| |||||    
T  829467 agctttagtgcaccg 829453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 46 - 153
Target Start/End: Original strand, 26292382 - 26292489
Alignment:
Q  46 agcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttg 145  Q
    |||||||||| |||||||| ||||| | |||||| |||||||||||| ||||| |||||||| ||| |||||||||| ||| ||||||| ||||| ||||    
T  26292382 agcctcttgtgtaaaacagggtaagaccgcgtacgatacaccaaatgatgggatcccttcccgaaccctgcatatgcgggaactctagtgcaccgggttg 26292481  T
Q  146 cccttttt 153  Q
     |||||||    
T  26292482 tccttttt 26292489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 45139624 - 45139519
Alignment:
Q  7 tcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaa--acagagtaaggctgcgtacaatacacc--aaatggtgggacccc 102  Q
    ||||||||||||||||| ||||||||||||  | |||||| |||||||| ||||  |||| |||||||||| |||||||||||  |||||||||||||||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgcatacaatacaccaaaaatggtgggacccc 45139525  T
Q  103 ttccca 108  Q
    ||||||    
T  45139524 ttccca 45139519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 25944474 - 25944583
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc-aaatggtggg 97  Q
    ||||||||| ||||||||||||| | ||||||||||||| ||||| ||||||  |||| ||||| | | ||||||| |||||||||||| ||||||||||    
T  25944474 ttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgggcaaggctgagtacaatacaccaaaatggtggg 25944573  T
Q  98 accccttccc 107  Q
    ||||||||||    
T  25944574 accccttccc 25944583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 47624088 - 47624154
Alignment:
Q  42 aaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggaccccttccc 107  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  47624088 aaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 47624154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 149
Target Start/End: Complemental strand, 353449 - 353351
Alignment:
Q  53 tgtataaaacagagtaaggctgcgtacaatacaccaa--atggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccct 149  Q
    |||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||||  || | |||||||| |||||| |||| ||||| ||||||||    
T  353449 tgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccct 353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 151
Target Start/End: Complemental strand, 45786327 - 45786214
Alignment:
Q  42 aaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacacc--aaatggtgggaccccttcccaaactctgcatatgcaggagctctagtaca 137  Q
    |||||||||||||| |||||  ||| ||||||||||||||||||||||  ||||||||||||||||||||  || ||||  |||| |||||| |||| ||    
T  45786327 aaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtgca 45786228  T
Q  138 ccgagttgcccttt 151  Q
    ||| ||||||||||    
T  45786227 ccgggttgcccttt 45786214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 45948993 - 45948849
Alignment:
Q  1 ttgttgtcatgtgactgaa---aggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaatggtg 95  Q
    ||||| |||||||||||||   |||| |||||||||| |||| |||||| |||||||| ||||| | ||  ||||||||| ||||||||||||| |||||    
T  45948993 ttgttttcatgtgactgaaggaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaaggctgcatacaatacaccaattggtg 45948894  T
Q  96 ggaccccttcccaaactctgcatatgcaggagctctagtacaccg 140  Q
    |||||||||| |  || |||| ||||| |||||| |||| |||||    
T  45948893 ggaccccttctcggaccctgcgtatgcgggagctttagtgcaccg 45948849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 19751586 - 19751724
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggaccc 101  Q
    |||||| |||| |||||||| |||| | |||||||| |||| |||||||||| |||||  ||  |||||| ||||||||||||||| | |||||||||||    
T  19751586 ttgtcacgtgattgaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaatcaaggtaaggttgcgtacaatacacctattggtgggaccc 19751685  T
Q  102 cttcccaaactctgcatatgcaggagctctagtacaccg 140  Q
     |||||| ||| ||  |||||| ||||| |||| |||||    
T  19751686 tttcccagactttgtgtatgcatgagctttagtgcaccg 19751724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 25517251 - 25517169
Alignment:
Q  70 ggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    ||||||||||||||||| ||||||||||||||||||||  |  |||| ||||| |||||| |||| ||||| |||||||||||    
T  25517251 ggctgcgtacaatacacaaaatggtgggaccccttcccggatcctgcgtatgctggagctttagtgcaccgggttgccctttt 25517169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 24577917 - 24577996
Alignment:
Q  76 gtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    ||||||||||| ||||||||||| || |||||| || |||||||| | ||||||||||| |||||  |||||||||||||    
T  24577917 gtacaatacactaaatggtgggatcctttcccagaccctgcatatacgggagctctagtgcaccggattgccctttttta 24577996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 24578007 - 24578086
Alignment:
Q  76 gtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttta 155  Q
    ||||||||||| |||||||||||| | |||||| || || ||||||| ||| ||||||| ||||| ||||||||||||||    
T  24578007 gtacaatacactaaatggtgggactctttcccagaccctacatatgcgggaactctagtgcaccgggttgccctttttta 24578086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 52428616 - 52428526
Alignment:
Q  15 ctgaaaggttacgggttcaagtc-ctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggacccc 102  Q
    ||||||||| ||||||| ||||| || ||| ||||||||||| |||||  ||| |||||||||||||||||||||||||| |||| |||||    
T  52428616 ctgaaaggtcacgggtttaagtctctggaagcagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaaatagtggaacccc 52428526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 53062043 - 53062093
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctc 51  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  53062043 ttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctc 53062093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 24851367 - 24851298
Alignment:
Q  85 accaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||||||||||||||||||  |  |||||||||| |||||| |||| ||||| |||||||||||||    
T  24851367 accaaatggtgggaccccttcccggatcctgcatatgcgggagctttagtgcaccgggttgccctttttt 24851298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 30452892 - 30452953
Alignment:
Q  91 tggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||||||||||  || |||||||||| ||||||||||| ||||| |||||||||||    
T  30452892 tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 30452953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 31831244 - 31831297
Alignment:
Q  41 gaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggt 94  Q
    ||||||||||||||| ||||| || |||||||||| ||||||||||||||||||    
T  31831244 gaaacagcctcttgtgtaaaatagggtaaggctgcatacaatacaccaaatggt 31831297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 12525414 - 12525489
Alignment:
Q  3 gttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcg 76  Q
    |||||||| |||||||||||| || ||||| |||||| ||||||||||||||| |||||  ||| |||||||||||    
T  12525414 gttgtcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggtaaggctgcg 12525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 9276323 - 9276366
Alignment:
Q  53 tgtataaaacagagtaaggctgcgtacaatacaccaaatggtgg 96  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
T  9276323 tgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgg 9276366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 50625072 - 50624998
Alignment:
Q  34 agtcctagaaacagcctcttgt--ataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcc 106  Q
    ||||||||||||||||||||||  |||||| || ||||||  |||||||||||||||  ||||||||| ||||||    
T  50625072 agtcctagaaacagcctcttgtgtataaaaaagggtaaggtagcgtacaatacaccatttggtgggacgccttcc 50624998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 31904975 - 31904906
Alignment:
Q  35 gtcctagaaacagcctctt--gtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacccc 102  Q
    ||||| |||||||||| ||  ||| ||||||| ||| | |||||||||||||||||||||||||||||||    
T  31904975 gtcctggaaacagcctattatgtaaaaaacagggtatgactgcgtacaatacaccaaatggtgggacccc 31904906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 43114994 - 43114918
Alignment:
Q  29 gttcaagtcctagaaacagcctcttgtataaaa---cagagtaagg-ctgcgtacaatacaccaaatggtgggaccc 101  Q
    ||||||||||| ||||||||||||||| |||||   ||| |||||| || | |||||||||||||||||||||||||    
T  43114994 gttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaagggctacctacaatacaccaaatggtgggaccc 43114918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 6242323 - 6242282
Alignment:
Q  113 ctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||||||||||||||||| ||||| |||||||||||||    
T  6242323 ctgcatatgcaggagctctagtgcaccgggttgccctttttt 6242282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 55401208 - 55401288
Alignment:
Q  28 ggttcaagtcctagaaacagcctct--tgtataaaacagagtaaggctgcgtacaatacacc-aaatggtgggaccccttc 105  Q
    ||||||||||||  |||||||||||  |||| |||||||  |||| ||||||| |||||||| ||||||||||||||||||    
T  55401208 ggttcaagtcctgtaaacagcctcttgtgtaaaaaacaggttaagactgcgtataatacaccaaaatggtgggaccccttc 55401288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 9627724 - 9627780
Alignment:
Q  5 tgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    ||||| |||||||||||| || ||||| ||||||||||||||| ||||||| |||||    
T  9627724 tgtcacgtgactgaaagggtatgggtttaagtcctagaaacagactcttgtgtaaaa 9627780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33235535 - 33235641
Alignment:
Q  1 ttgttgtcatgtgac-tgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa---cagagtaaggctgcgtacaatacaccaaatggtgg 96  Q
    ||||||||||||||| |||||||| ||  |||||| || |  ||| |||||||||| |||||   ||| ||||| ||| ||||||||||| |||||||||    
T  33235535 ttgttgtcatgtgacatgaaaggtcacaagttcaaatcgtgtaaagagcctcttgtgtaaaaaaacagggtaagactgtgtacaatacactaaatggtgg 33235634  T
Q  97 gacccct 103  Q
    |||||||    
T  33235635 gacccct 33235641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35417921 - 35417981
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    ||||| |||||||||||| |||| ||| |||||| |||| ||||||||||||||| |||||    
T  35417921 ttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaaaa 35417981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 29106555 - 29106665
Alignment:
Q  2 tgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaatggtgggac 99  Q
    |||||||||||| || |||| | |||||| |||||| |  ||||| |||||||| ||||| | ||  ||||| | ||||||||||||||||| ||||||     
T  29106555 tgttgtcatgtggctcaaagatcacgggtacaagtcttgaaaacaacctcttgtgtaaaaaataggataaggttacgtacaatacaccaaattgtgggat 29106654  T
Q  100 cccttcccaaa 110  Q
    ||||| |||||    
T  29106655 ccctttccaaa 29106665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 39212003 - 39212081
Alignment:
Q  9 atgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataa--aacagagtaaggctgcgtacaataca 85  Q
    |||||||||||| || ||||||||||||||| |||| | |||||||| |||  ||||  ||||| ||||||||||||||    
T  39212003 atgtgactgaaatgtcacgggttcaagtcctggaaataacctcttgtgtaaataacaaggtaagactgcgtacaataca 39212081  T

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Target: scaffold0223 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 11122 - 11264
Alignment:
Q  9 atgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttccca 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| |||||||     
T  11122 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacaaagtaaggctgcttacaatacaccaaatggtgggacaccttcccg 11221  T
Q  109 aactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
     || |||||||||| ||||||||||| ||||  ||||||||||    
T  11222 gaccctgcatatgcgggagctctagtgcaccaggttgcccttt 11264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 58963 - 59114
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat--aaaacagagtaaggctgcgtacaatacacc--aaatggtgggac 99  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||| ||||| ||||||||||||||||  ||||||||||||    
T  58963 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgcgtacaatacaccaaaaatggtgggac 59062  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttt 151  Q
    ||||||||| ||||||| ||||| |||||| |||| || || ||||||||||    
T  59063 cccttcccagactctgcgtatgcgggagctttagtgcatcgggttgcccttt 59114  T

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Target: scaffold0258 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 13175 - 13022
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa-cagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||||  ||||| ||  |||||||||||||||||||||| |||||||||||    
T  13175 ttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaaaaacaaggtaaggctgcgtacaatacaccgaatggtgggac 13076  T
Q  100 cccttcccaaactctgcatatgcaggagctctagtacaccgagttgcccttttt 153  Q
    ||||||||| || |||| ||||| || ||| |||| ||||| ||||||||||||    
T  13075 cccttcccagaccctgcgtatgcgggggctttagtgcaccgggttgcccttttt 13022  T

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Target: scaffold0015 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 48758 - 48633
Alignment:
Q  27 gggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcagga 126  Q
    ||||||||||  | ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||| |||    
T  48758 gggttcaagtggtggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcggga 48659  T
Q  127 gctctagtacaccgagttgccctttt 152  Q
    |||||||| ||||| |||||||||||    
T  48658 gctctagtgcaccgggttgccctttt 48633  T

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Target: scaffold0057 (Bit Score: 73; Significance: 2e-33; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 46814 - 46969
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagag--taaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||  ||||| |||||||||||| || |||||| |||||||| ||||| | ||  ||||| ||||||||||||||||||||||||||    
T  46814 ttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaaggttgcgtacaatacaccaaatggtggga 46913  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    |||||||||  || |||| ||||| |||||| |||| ||||| |||||||||||||    
T  46914 ccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 46969  T

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Target: scaffold0057; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 24919 - 24769
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||||||||| | |||||||||||     ||||||||||||| |||||  ||| |||||||||||||||| ||||||||||||||||    
T  24919 ttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaaacagggtaaggctgcgtacaacacaccaaatggtggga 24825  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||| ||| |||| ||||| |||||| |||| || |  |||||||||||||    
T  24824 ccccttcccgaaccctgcgtatgcgggagctttagtgcagccggttgccctttttt 24769  T

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Target: scaffold0057; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 43672 - 43794
Alignment:
Q  31 tcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacccc-ttcccaaactctgcatatgcaggagct 129  Q
    |||||| || |||||||| |||||| |||||||  ||||||||||||||||||||||||||||||||||||| ||| |  || |||||||||| ||||||    
T  43672 tcaagttctggaaacagcgtcttgtgtaaaacaaggtaaggctgcgtacaatacaccaaatggtgggacccctttctcggaccctgcatatgcgggagct 43771  T
Q  130 ctagtacaccgagttgccctttt 152  Q
    ||||| ||| |||||||||||||    
T  43772 ctagtgcactgagttgccctttt 43794  T

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Target: scaffold0057; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 129
Target Start/End: Complemental strand, 46793 - 46729
Alignment:
Q  66 gtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccaaactctgcatatgcaggagct 129  Q
    |||||| ||| ||||||| |||||| |||||||||||||||||| || |||| ||||| ||||||    
T  46793 gtaaggatgcatacaatataccaaaatggtgggaccccttcccagaccctgcgtatgcgggagct 46729  T

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Target: scaffold1176 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1737 - 1631
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    ||||||||||||||||||||||| | |||||||||||||  ||||| |||||||| ||||||||  ||||||||| |||||||||||||||| |||||||    
T  1737 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaaaacaggataaggctgcatacaatacaccaaatgatgggacc 1638  T
Q  101 ccttccc 107  Q
    |||||||    
T  1637 ccttccc 1631  T

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Target: scaffold0005 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 226558 - 226456
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgt---ataaaacagagtaaggctgcgtacaatacaccaaatggtggg 97  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||   | ||||||| |||||||||| ||||||||| |||||||||||    
T  226558 ttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaatacatcaaatggtggg 226459  T
Q  98 acc 100  Q
    |||    
T  226458 acc 226456  T

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Target: scaffold0180 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 24218 - 24130
Alignment:
Q  66 gtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttttt 154  Q
    ||||||||||||||||||||||||||||||||||||||||||  || |||||||||| ||||||||||| |||||  ||||||||||||    
T  24218 gtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccggattgccctttttt 24130  T

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Target: scaffold0036 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 35167 - 35062
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat---aaaacagagtaaggctgcgtacaatacaccaaatggtgggacc 100  Q
    |||||||||||||| ||||| |||||||||||||||  |||||| ||||||| |   ||||||| |||||||||||||||||||||||||||||||||||    
T  35167 ttgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 35068  T
Q  101 ccttcc 106  Q
    | ||||    
T  35067 ctttcc 35062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 10793 - 10946
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtggga 98  Q
    ||||||||||||||||| ||||| |||||||||||  ||  ||||| |||||||| |||||  ||| ||| |||||||| ||||||||||||||||||||    
T  10793 ttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggctgcgtccaatacaccaaatggtggga 10892  T
Q  99 ccccttcccaaactctgcatatgcaggagctctagtacaccgagttgccctttt 152  Q
    |||||||||  || |||| ||||| |||||| |||| ||| | ||||| |||||    
T  10893 ccccttcccggaccctgcgtatgcgggagctttagtgcactgggttgctctttt 10946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4140 - 4251
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaa--acagagtaaggctgcgtacaatacacc---aaatggtg 95  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||| |||||||| ||||  ||||  ||||| |||||||||||||||   || |||||    
T  4140 ttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataattggtg 4239  T
Q  96 ggaccccttccc 107  Q
    ||||||||||||    
T  4240 ggaccccttccc 4251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 23590 - 23691
Alignment:
Q  9 atgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa--cagagtaaggctgcgtacaatacaccaaatggtgggaccccttcc 106  Q
    |||||||||||||| |||||||||||||| |  ||||| |||||||| |||||  ||| || ||||||||||||||  | ||||||||||||||||||||    
T  23590 atgtgactgaaagggtacgggttcaagtcttgcaaacaacctcttgtgtaaaaaacagggtgaggctgcgtacaatgtagcaaatggtgggaccccttcc 23689  T
Q  107 ca 108  Q
    ||    
T  23690 ca 23691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 3560 - 3679
Alignment:
Q  34 agtcctagaaacagcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatgcaggagctct 131  Q
    |||||| |||| |||||||||| ||||| | |  ||||||||||||| |||||||| |||| |||||||||||||| ||| |||| ||||| | |||| |    
T  3560 agtcctggaaagagcctcttgtgtaaaatataaggtaaggctgcgtataatacaccgaatgatgggaccccttcccgaaccctgcgtatgcggcagcttt 3659  T
Q  132 agtacaccgagttgcccttt 151  Q
    ||| ||||||||| ||||||    
T  3660 agtgcaccgagtttcccttt 3679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 72996 - 72867
Alignment:
Q  25 acgggttcaagtcctagaaaca-gcctcttgtataaaacaga--gtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaactctgcatatg 121  Q
    |||||||||||||||||||||| | ||||||| ||||| | |  |||||||||| |||||||||||||||||| | ||||||||||  |  |||| ||||    
T  72996 acgggttcaagtcctagaaacaagtctcttgtgtaaaaaacacggtaaggctgcctacaatacaccaaatggtagtaccccttcccggaacctgcgtatg 72897  T
Q  122 caggagctctagtacaccgagttgcccttt 151  Q
    | |||||| |||| ||||  ||||||||||    
T  72896 cgggagctttagtgcaccaggttgcccttt 72867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 43115 - 43210
Alignment:
Q  4 ttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtat-aaaacagagtaaggctgcgtacaatacaccaaatggtgggac 99  Q
    ||||||||||| |||||||| ||| ||||| ||||||||||||||||||||| | ||||||||||||| |    ||||||||| |||||||||||||    
T  43115 ttgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaaacagagtaagac-atttacaatacatcaaatggtgggac 43210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 83858 - 83903
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaaca 46  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||    
T  83858 ttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaaca 83903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24647 - 24695
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcc 49  Q
    ||||||||| ||||||| ||||| ||||||||||||||| |||||||||    
T  24647 ttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaacagcc 24695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 32913 - 33016
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctctt--gtataaaacagagtaaggctgcgtacaatacaccaaa-tggtggg 97  Q
    |||||| || |||||| |||||| | ||||||||||||  |||| | ||||||  ||| ||||||||||||| |||  |||||||||||||| |||||||    
T  32913 ttgttgccacgtgacttaaaggtcatgggttcaagtccgcgaaaaaacctcttctgtaaaaaacagagtaagactgtatacaatacaccaaattggtggg 33012  T
Q  98 accc 101  Q
    ||||    
T  33013 accc 33016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 101
Target Start/End: Complemental strand, 3747 - 3719
Alignment:
Q  73 tgcgtacaatacaccaaatggtgggaccc 101  Q
    |||||||||||||||||||||||||||||    
T  3747 tgcgtacaatacaccaaatggtgggaccc 3719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8874 - 8934
Alignment:
Q  1 ttgttgtcatgtgactgaaaggttacgggttcaagtcctagaaacagcctcttgtataaaa 61  Q
    ||||||||||||||||| ||||| || ||||||| |||| |||||| | |||||| |||||    
T  8874 ttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttcttgtgtaaaa 8934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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