View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2608_low_13 (Length: 259)
Name: NF2608_low_13
Description: NF2608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2608_low_13 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 17 - 259
Target Start/End: Complemental strand, 39014093 - 39013851
Alignment:
| Q |
17 |
agacaagaatggtataaggaaatgcttgactttgcttctgacaacgatgagagacgtaaactccttgaaaggtatttatatgatgtttaaatatatttca |
116 |
Q |
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| T |
39014093 |
agacaagaatggtataaggaaatgcttgactttgcttctgacaacgatgagagacgtaaactccttgaaaggtatttatatgatgtttaaatatatttca |
39013994 |
T |
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| Q |
117 |
cattttccttgtatactctaacaattgttgagtccaagacaactcaattgtataaatagtaaatcaagaattgaataagagacattatgacattggtgca |
216 |
Q |
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| T |
39013993 |
cattttccttgtatactctaacaattgtttagtccaagacaactcaattgtataaatagtaaatcaagaattgaataagagacattatgacattggtgca |
39013894 |
T |
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| Q |
217 |
tagtgaattgagcataatgtaatgaagttttgtttgcaatttc |
259 |
Q |
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| T |
39013893 |
tagtgaattgagcataatgcaatgaagttttgtttgcaatttc |
39013851 |
T |
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