View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2609-Insertion-1 (Length: 875)

Name: NF2609-Insertion-1
Description: NF2609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2609-Insertion-1
NF2609-Insertion-1
[»] chr2 (34 HSPs)
chr2 (397-618)||(26165004-26165225)
chr2 (41-180)||(32216171-32216310)
chr2 (238-408)||(26164829-26164981)
chr2 (45-121)||(27471566-27471643)
chr2 (181-241)||(26164740-26164801)
chr2 (749-801)||(26165279-26165331)
chr2 (45-108)||(19203156-19203219)
chr2 (45-93)||(23970521-23970569)
chr2 (8-52)||(32215669-32215713)
chr2 (669-738)||(3044371-3044441)
chr2 (53-115)||(24669899-24669961)
chr2 (53-114)||(24680349-24680410)
chr2 (665-731)||(28864077-28864145)
chr2 (65-168)||(23713748-23713851)
chr2 (63-121)||(20634681-20634740)
chr2 (45-84)||(27950248-27950287)
chr2 (45-88)||(28000421-28000464)
chr2 (41-183)||(18241445-18241588)
chr2 (53-180)||(18359987-18360114)
chr2 (41-121)||(24698353-24698434)
chr2 (130-181)||(19671029-19671080)
chr2 (45-88)||(20320196-20320238)
chr2 (130-181)||(21178231-21178282)
chr2 (63-113)||(24316751-24316801)
chr2 (836-874)||(26165331-26165369)
chr2 (45-95)||(26391687-26391737)
chr2 (130-180)||(32452831-32452881)
chr2 (669-737)||(2702258-2702327)
chr2 (54-95)||(21083157-21083198)
chr2 (45-121)||(23003999-23004076)
chr2 (131-168)||(24435149-24435186)
chr2 (128-181)||(24866311-24866364)
chr2 (41-181)||(25106082-25106223)
chr2 (130-167)||(41524043-41524080)
[»] scaffold0023 (4 HSPs)
scaffold0023 (41-183)||(18836-18978)
scaffold0023 (61-167)||(40938-41044)
scaffold0023 (8-52)||(18332-18376)
scaffold0023 (130-183)||(80392-80445)
[»] chr8 (29 HSPs)
chr8 (41-168)||(32120627-32120754)
chr8 (41-165)||(14591926-14592051)
chr8 (41-161)||(29333061-29333181)
chr8 (45-181)||(17440352-17440488)
chr8 (45-157)||(19155719-19155830)
chr8 (45-183)||(22420241-22420379)
chr8 (41-168)||(17462234-17462360)
chr8 (45-108)||(12576132-12576196)
chr8 (8-52)||(16414019-16414063)
chr8 (8-52)||(32121212-32121256)
chr8 (664-738)||(9932095-9932170)
chr8 (47-93)||(35027659-35027705)
chr8 (53-93)||(43111260-43111300)
chr8 (664-738)||(25582580-25582655)
chr8 (64-168)||(32806752-32806856)
chr8 (130-180)||(20402330-20402380)
chr8 (60-121)||(21589492-21589554)
chr8 (130-182)||(20047382-20047434)
chr8 (127-183)||(20458611-20458667)
chr8 (101-168)||(20493427-20493495)
chr8 (45-104)||(20534227-20534286)
chr8 (45-93)||(22995071-22995118)
chr8 (61-168)||(23761689-23761796)
chr8 (130-168)||(19883754-19883792)
chr8 (130-168)||(24487174-24487212)
chr8 (70-168)||(41597322-41597420)
chr8 (70-168)||(45291612-45291710)
chr8 (71-183)||(21672803-21672915)
chr8 (41-121)||(24352226-24352307)
[»] chr7 (44 HSPs)
chr7 (41-168)||(24273922-24274049)
chr7 (41-168)||(18422651-18422778)
chr7 (41-183)||(14272259-14272400)
chr7 (669-738)||(38142281-38142350)
chr7 (669-738)||(29626961-29627030)
chr7 (41-181)||(14275046-14275185)
chr7 (41-180)||(37794483-37794621)
chr7 (43-180)||(1491361-1491497)
chr7 (41-182)||(16997497-16997637)
chr7 (669-738)||(29125845-29125914)
chr7 (672-738)||(18299446-18299512)
chr7 (669-738)||(15669726-15669795)
chr7 (45-93)||(16572431-16572479)
chr7 (45-93)||(16593183-16593231)
chr7 (670-738)||(32575504-32575569)
chr7 (60-113)||(11084621-11084674)
chr7 (8-52)||(24274561-24274605)
chr7 (60-113)||(11092373-11092426)
chr7 (41-121)||(20220978-20221059)
chr7 (62-157)||(9391060-9391155)
chr7 (45-93)||(17018244-17018292)
chr7 (53-95)||(62338-62380)
chr7 (41-168)||(9178467-9178594)
chr7 (665-738)||(9948957-9949031)
chr7 (669-738)||(11621395-11621465)
chr7 (665-738)||(28782014-28782088)
chr7 (130-183)||(20486239-20486292)
chr7 (61-157)||(44013372-44013468)
chr7 (71-168)||(9321066-9321163)
chr7 (129-181)||(12429897-12429948)
chr7 (60-95)||(30822851-30822886)
chr7 (61-157)||(18004831-18004926)
chr7 (130-180)||(21190603-21190653)
chr7 (130-168)||(23969789-23969827)
chr7 (70-168)||(29329794-29329892)
chr7 (128-181)||(9034218-9034271)
chr7 (127-168)||(13850869-13850910)
chr7 (61-121)||(16220572-16220632)
chr7 (54-95)||(16551995-16552036)
chr7 (54-95)||(16613626-16613667)
chr7 (127-168)||(18076429-18076470)
chr7 (130-183)||(18300607-18300660)
chr7 (709-738)||(19324294-19324323)
chr7 (45-93)||(48990446-48990495)
[»] chr6 (25 HSPs)
chr6 (41-168)||(34962265-34962392)
chr6 (669-738)||(7093964-7094033)
chr6 (45-108)||(27849899-27849962)
chr6 (45-181)||(14247058-14247193)
chr6 (45-181)||(20735416-20735552)
chr6 (669-738)||(7734076-7734145)
chr6 (8-52)||(23991987-23992031)
chr6 (45-108)||(35007354-35007418)
chr6 (669-738)||(1840643-1840713)
chr6 (45-94)||(18897143-18897192)
chr6 (41-180)||(18926691-18926829)
chr6 (675-730)||(24795108-24795163)
chr6 (63-180)||(2200562-2200679)
chr6 (45-121)||(15688681-15688758)
chr6 (53-183)||(20223088-20223220)
chr6 (53-183)||(22117072-22117204)
chr6 (53-93)||(23351078-23351118)
chr6 (53-113)||(27574141-27574201)
chr6 (12-52)||(34962850-34962890)
chr6 (45-95)||(15175569-15175618)
chr6 (45-95)||(15903051-15903100)
chr6 (131-180)||(9468903-9468952)
chr6 (130-183)||(18179392-18179445)
chr6 (127-168)||(18897236-18897277)
chr6 (60-168)||(23018559-23018667)
[»] scaffold0577 (2 HSPs)
scaffold0577 (41-181)||(5448-5588)
scaffold0577 (60-95)||(9848-9883)
[»] chr3 (36 HSPs)
chr3 (41-168)||(46821108-46821235)
chr3 (41-113)||(15448829-15448901)
chr3 (45-108)||(23432029-23432092)
chr3 (665-738)||(53458907-53458980)
chr3 (41-168)||(43925109-43925237)
chr3 (45-87)||(11257999-11258041)
chr3 (60-157)||(12268371-12268468)
chr3 (8-52)||(13543539-13543583)
chr3 (41-163)||(17043196-17043316)
chr3 (8-52)||(46821690-46821734)
chr3 (664-738)||(10436429-10436504)
chr3 (41-157)||(21836474-21836591)
chr3 (45-93)||(315376-315424)
chr3 (130-180)||(12537248-12537298)
chr3 (41-115)||(33564217-33564291)
chr3 (61-157)||(49390968-49391063)
chr3 (53-121)||(31225802-31225871)
chr3 (127-168)||(32404995-32405036)
chr3 (61-168)||(1466758-1466865)
chr3 (61-168)||(32306860-32306967)
chr3 (130-182)||(41123020-41123072)
chr3 (130-181)||(6470361-6470412)
chr3 (61-179)||(15467050-15467167)
chr3 (130-181)||(25225677-25225728)
chr3 (71-181)||(28193875-28193986)
chr3 (90-168)||(37251990-37252069)
chr3 (130-180)||(12509640-12509690)
chr3 (130-168)||(12854309-12854347)
chr3 (45-95)||(16977879-16977928)
chr3 (45-95)||(43399949-43399998)
chr3 (70-168)||(6807652-6807750)
chr3 (131-188)||(12334196-12334253)
chr3 (97-181)||(12936489-12936574)
chr3 (61-157)||(16096556-16096652)
chr3 (127-168)||(17045918-17045959)
chr3 (127-168)||(17048078-17048119)
[»] scaffold0716 (2 HSPs)
scaffold0716 (41-168)||(3590-3718)
scaffold0716 (8-52)||(4158-4202)
[»] chr1 (22 HSPs)
chr1 (669-738)||(15760005-15760074)
chr1 (45-114)||(25264095-25264164)
chr1 (45-108)||(49999396-49999460)
chr1 (10-52)||(14238974-14239016)
chr1 (664-737)||(20505671-20505745)
chr1 (61-157)||(35983049-35983145)
chr1 (669-738)||(19227886-19227956)
chr1 (669-738)||(26676911-26676981)
chr1 (61-168)||(33680174-33680282)
chr1 (63-168)||(8881605-8881710)
chr1 (70-157)||(20847951-20848039)
chr1 (127-182)||(20240777-20240832)
chr1 (70-180)||(20915454-20915565)
chr1 (130-168)||(12754083-12754121)
chr1 (45-95)||(21534683-21534733)
chr1 (45-95)||(23086570-23086619)
chr1 (45-95)||(46199547-46199596)
chr1 (41-121)||(50685843-50685925)
chr1 (61-138)||(52928821-52928898)
chr1 (130-183)||(21476794-21476847)
chr1 (677-737)||(28756478-28756539)
chr1 (127-180)||(35087450-35087503)
[»] scaffold0028 (2 HSPs)
scaffold0028 (41-113)||(62581-62653)
scaffold0028 (45-121)||(86981-87058)
[»] scaffold0081 (1 HSPs)
scaffold0081 (45-168)||(5524-5647)
[»] chr5 (21 HSPs)
chr5 (41-168)||(30139559-30139685)
chr5 (40-180)||(22179006-22179147)
chr5 (45-182)||(20298533-20298669)
chr5 (41-88)||(31453945-31453992)
chr5 (41-83)||(17005026-17005068)
chr5 (664-737)||(26368935-26369009)
chr5 (63-121)||(24211791-24211850)
chr5 (61-141)||(21742859-21742939)
chr5 (60-113)||(26833395-26833448)
chr5 (63-182)||(26012870-26012989)
chr5 (677-737)||(40973273-40973333)
chr5 (70-181)||(10776549-10776660)
chr5 (70-168)||(14047266-14047364)
chr5 (130-180)||(20807697-20807747)
chr5 (61-138)||(21330362-21330440)
chr5 (63-168)||(22141951-22142056)
chr5 (669-738)||(22580389-22580459)
chr5 (45-95)||(26733585-26733634)
chr5 (45-95)||(27768826-27768875)
chr5 (61-138)||(29916421-29916498)
chr5 (130-180)||(31143389-31143439)
[»] scaffold0125 (1 HSPs)
scaffold0125 (41-108)||(3006-3073)
[»] scaffold0671 (1 HSPs)
scaffold0671 (41-168)||(8214-8340)
[»] scaffold0071 (1 HSPs)
scaffold0071 (41-113)||(13288-13360)
[»] chr4 (25 HSPs)
chr4 (669-737)||(40345771-40345839)
chr4 (61-179)||(46641735-46641853)
chr4 (669-738)||(10418951-10419021)
chr4 (45-121)||(10697168-10697245)
chr4 (45-121)||(10910937-10911014)
chr4 (672-737)||(30598231-30598296)
chr4 (61-168)||(39707131-39707238)
chr4 (63-181)||(43199398-43199517)
chr4 (63-121)||(17995153-17995212)
chr4 (45-95)||(40618731-40618781)
chr4 (672-737)||(40850848-40850914)
chr4 (677-738)||(54947406-54947468)
chr4 (61-168)||(15993828-15993935)
chr4 (45-121)||(19608509-19608586)
chr4 (12-52)||(3484574-3484614)
chr4 (62-157)||(8842199-8842294)
chr4 (41-113)||(9922334-9922406)
chr4 (671-738)||(48640769-48640837)
chr4 (41-168)||(46641255-46641385)
chr4 (41-121)||(10055568-10055650)
chr4 (130-168)||(45631517-45631555)
chr4 (53-184)||(53632382-53632517)
chr4 (665-702)||(27644673-27644710)
chr4 (665-737)||(43499324-43499397)
chr4 (129-178)||(51464779-51464827)
[»] scaffold0420 (2 HSPs)
scaffold0420 (41-181)||(14515-14656)
scaffold0420 (41-183)||(7061-7204)
[»] scaffold0546 (1 HSPs)
scaffold0546 (10-52)||(9374-9416)
[»] scaffold0109 (1 HSPs)
scaffold0109 (10-52)||(3891-3933)
[»] scaffold0009 (1 HSPs)
scaffold0009 (45-121)||(158388-158465)
[»] scaffold0607 (1 HSPs)
scaffold0607 (45-85)||(1457-1497)
[»] scaffold0042 (2 HSPs)
scaffold0042 (49-93)||(79453-79497)
scaffold0042 (49-93)||(82815-82859)
[»] scaffold0014 (1 HSPs)
scaffold0014 (45-93)||(207312-207360)
[»] scaffold0447 (1 HSPs)
scaffold0447 (45-104)||(913-971)
[»] scaffold0383 (1 HSPs)
scaffold0383 (45-104)||(3777-3835)
[»] scaffold0104 (2 HSPs)
scaffold0104 (41-168)||(15639-15766)
scaffold0104 (41-168)||(17659-17786)
[»] scaffold0020 (1 HSPs)
scaffold0020 (669-738)||(124189-124259)
[»] scaffold0064 (1 HSPs)
scaffold0064 (41-168)||(27499-27627)
[»] scaffold0839 (1 HSPs)
scaffold0839 (53-168)||(2828-2944)
[»] scaffold0139 (1 HSPs)
scaffold0139 (45-108)||(22430-22494)
[»] scaffold0078 (1 HSPs)
scaffold0078 (70-180)||(9699-9810)
[»] scaffold1580 (1 HSPs)
scaffold1580 (60-115)||(151-206)
[»] scaffold0674 (1 HSPs)
scaffold0674 (63-121)||(2800-2859)
[»] scaffold0556 (1 HSPs)
scaffold0556 (61-183)||(5986-6108)
[»] scaffold0001 (2 HSPs)
scaffold0001 (128-183)||(496640-496695)
scaffold0001 (131-181)||(75760-75810)
[»] scaffold0432 (1 HSPs)
scaffold0432 (671-737)||(9136-9202)
[»] scaffold0008 (2 HSPs)
scaffold0008 (130-183)||(70861-70914)
scaffold0008 (130-183)||(78704-78757)
[»] scaffold0914 (1 HSPs)
scaffold0914 (45-93)||(931-978)
[»] scaffold0423 (1 HSPs)
scaffold0423 (131-183)||(9489-9541)
[»] scaffold0133 (1 HSPs)
scaffold0133 (41-113)||(43639-43711)
[»] scaffold0046 (2 HSPs)
scaffold0046 (44-84)||(26879-26919)
scaffold0046 (45-95)||(17739-17789)
[»] scaffold2007 (1 HSPs)
scaffold2007 (47-121)||(463-538)
[»] scaffold0877 (1 HSPs)
scaffold0877 (63-177)||(77-191)
[»] scaffold0063 (1 HSPs)
scaffold0063 (130-181)||(42861-42912)
[»] scaffold0032 (1 HSPs)
scaffold0032 (60-95)||(66347-66382)
[»] scaffold0019 (1 HSPs)
scaffold0019 (130-181)||(156565-156616)
[»] scaffold0956 (1 HSPs)
scaffold0956 (45-95)||(3700-3749)
[»] scaffold0507 (1 HSPs)
scaffold0507 (63-168)||(8927-9032)
[»] scaffold0462 (2 HSPs)
scaffold0462 (45-95)||(1401-1450)
scaffold0462 (45-95)||(6907-6956)
[»] scaffold0450 (1 HSPs)
scaffold0450 (54-88)||(1815-1849)
[»] scaffold0300 (1 HSPs)
scaffold0300 (665-738)||(9604-9678)
[»] scaffold0158 (1 HSPs)
scaffold0158 (53-95)||(26745-26787)
[»] scaffold0138 (1 HSPs)
scaffold0138 (45-95)||(19035-19084)
[»] scaffold0057 (1 HSPs)
scaffold0057 (45-95)||(71703-71752)
[»] scaffold0034 (1 HSPs)
scaffold0034 (61-138)||(52995-53072)
[»] scaffold2112 (1 HSPs)
scaffold2112 (130-183)||(826-879)
[»] scaffold0500 (1 HSPs)
scaffold0500 (61-180)||(10069-10187)
[»] scaffold0434 (1 HSPs)
scaffold0434 (45-114)||(7933-8002)
[»] scaffold0293 (1 HSPs)
scaffold0293 (131-168)||(22091-22128)
[»] scaffold0031 (1 HSPs)
scaffold0031 (131-168)||(37772-37809)


Alignment Details
Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 397 - 618
Target Start/End: Original strand, 26165004 - 26165225
Alignment:
Q  397 aagagatattctgtcggatgcattataactttcttttggggtctcccattgcacgaggagatggtgaatccacttttggggacctcnnnnnnncatagtc 496  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  26165004 aagagatattctgtcggatgcattataactttcttttggggtctcccattgcacgaggagatggtgaatccacttttggggacctctttttttcatagtc 26165103  T
Q  497 aaaagaaggtcacaacattcccttgttttccaagtcaactcaccctttgcatgaaaacagaaactattctatacaaaaagctttgtcataaaatttattg 596  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26165104 aaaagaaggtcacaacattcccttgttttccaagtcaactcaccctttgcatgaaaacagaaactattctatacaaaaagctttgtcatgaaatttattg 26165203  T
Q  597 atgccttggaaaatacgacaaa 618  Q
    ||||||||||||||||||||||    
T  26165204 atgccttggaaaatacgacaaa 26165225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 41 - 180
Target Start/End: Original strand, 32216171 - 32216310
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgatta 140  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  32216171 atatttatgttgattgaactttgaaggaaaattagttaattatcccatgtatgatcttttagaagtgtagcatccgtttatatgtgaattactctgatta 32216270  T
Q  141 tctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
    ||||||||||| ||||||||||| |||| ||| |||||||    
T  32216271 tctttatgaaagttttatcttgggaaaacagggtgttaca 32216310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 26164829 - 26164981
Alignment:
Q  238 ggttgaatatgcgtactgctcagccattccttgatgttcatttctgttttgtcacattccctgcnnnnnnnnnnnncctggcaacttcttgcgatggctt 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||                 ||||||||||||||| ||||||||    
T  26164829 ggttgaatatgcgtactgctcagccattccttgatgttcatttctgttttgccacattc-----------------cctggcaacttcttgtgatggctt 26164911  T
Q  338 gcattttgattaatatcacnnnnnnnagaaaaataattattttattaaactttattccgaagagatattct 408  Q
    |||||||||||||||||||       ||||||||||| |||||||||||||||||||  ||||||||||||    
T  26164912 gcattttgattaatatcac-ttttttagaaaaataataattttattaaactttattcgaaagagatattct 26164981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 27471643 - 27471566
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| |||||||||    
T  27471643 ttatgttgatttaactttgaaggaaaattagttaattattccatttatgatttttaagaagtgtagcattccgtttat 27471566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 26164740 - 26164801
Alignment:
Q  181 atttgcacttctgaagtaagca-ttttaaagatccaaagttagagaatatttctttttggtt 241  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||    
T  26164740 atttgcacttctgaagtcagcacttttaaagaaccaaagttagagaatatttctttttggtt 26164801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 749 - 801
Target Start/End: Original strand, 26165279 - 26165331
Alignment:
Q  749 atagaccacttttttagtatcgattcatcatagaccattcaatacattttctt 801  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  26165279 atagaccacttttttagtatcgattcatcatagaccatataatacattttctt 26165331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 19203156 - 19203219
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgt 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| |||  |||||||    
T  19203156 ttatgttgattgaactttgaaggaaaattaattaattattccatttatgatttttatgaagtgt 19203219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 23970521 - 23970569
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  23970521 ttatgttgattgaattttgaaggaaaattagttaattattccatttatg 23970569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 32215669 - 32215713
Alignment:
Q  8 gatgttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  32215669 gatgttatgatattgttatatgtgatgaatatgatgtttatgttg 32215713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 669 - 738
Target Start/End: Original strand, 3044371 - 3044441
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    ||||||| |||| |||||||||||||| |||| ||||||| ||||||| |||||||||||||| |||||||    
T  3044371 agctgggtttttagcacttcttgtgctgaaatattcaggcgttcagtaatatattccattttaacttcttc 3044441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 24669961 - 24669899
Alignment:
Q  53 attgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatcc 115  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||  || |||||||||||||||    
T  24669961 attgaattttgaaggataattagttaattattccatttatgattcttaagaagtgtagcatcc 24669899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 24680410 - 24680349
Alignment:
Q  53 attgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatc 114  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||  || ||||||||||||||    
T  24680410 attgaattttgaaggataattagttaattattccatttatgattcttaagaagtgtagcatc 24680349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 665 - 731
Target Start/End: Complemental strand, 28864145 - 28864077
Alignment:
Q  665 ttttagctggggtttttgcacttcttgtgctaaaa--ttttcaggcttcagtattatattccattttag 731  Q
    |||| ||||||||||||||||||||| |||| |||  ||||||||||||| || |||||||||||||||    
T  28864145 ttttggctggggtttttgcacttcttctgctgaaattttttcaggcttcaataatatattccattttag 28864077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 168
Target Start/End: Original strand, 23713748 - 23713851
Alignment:
Q  65 aggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgattatctttatgaaatttttatcttgg 163  Q
    |||| ||||||||||||||  ||| |||||| ||||||||||||||||| |||||||| | || ||||||||||| |   ||||||||||||||| ||||    
T  23713748 aggataattagttaattatctcatttatgat-ttttagaagtgtagcattccgtttatgtgttgattactctgataaatgttatgaaatttttatgttgg 23713846  T
Q  164 aaaaa 168  Q
     ||||    
T  23713847 gaaaa 23713851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 20634681 - 20634740
Alignment:
Q  63 gaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||| ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||    
T  20634681 gaaggataattagttaattattccatttatgatttttaagaagtgtagcattccgtttat 20634740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 27950248 - 27950287
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattatt 84  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  27950248 ttatgttgattgaactttgaagaaaaattagttaattatt 27950287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 28000421 - 28000464
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccat 88  Q
    |||||||||||||| ||||||| |||||||||||||||||||||    
T  28000421 ttatgttgattgaattttgaagaaaaattagttaattattccat 28000464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 183
Target Start/End: Complemental strand, 18241588 - 18241445
Alignment:
Q  41 atatttatgttga-ttgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgat 138  Q
    ||||||||||||| ||||| | ||||||| || | |||| ||||||||| |||||| ||| |||||||||||| ||||||||| |   ||  ||||||||    
T  18241588 atatttatgttgaattgaattatgaaggataaattgttatttattccatttatgatttttaagaagtgtagcattccgtttatgtggaaa--actctgat 18241491  T
Q  139 t-atctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    | ||  ||||||||||||||| |||| ||||  |||||||||||||    
T  18241490 taattgttatgaaatttttatgttgggaaaacgggatgttacaatt 18241445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 18359987 - 18360114
Alignment:
Q  53 attgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgatt-atctttatgaa 150  Q
    |||||| ||||||||| |||| |||| ||||||||| |||||| ||| ||||||||||||| |||||  ||| || |  ||||||||| ||  |||||||    
T  18359987 attgaattttgaaggataatttgttatttattccatttatgatttttaagaagtgtagcataccgtt--tatgttgaaaactctgattaattgttatgaa 18360084  T
Q  151 atttttatcttggaaaaataggatgttaca 180  Q
    |||||||| |||| ||||| || |||||||    
T  18360085 atttttatgttgggaaaatggggtgttaca 18360114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 24698353 - 24698434
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||||||||||||||| |  |||||| || | |||| ||||||||| |||||| ||| |||||||||||| |||||||||    
T  24698353 atatttatgttgattgaattacgaaggataaattgttatttattccatttatgatttttaagaagtgtagcattccgtttat 24698434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 19671080 - 19671029
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    |||||||||||| |||||||||||||||| |||| ||||| || ||||||||    
T  19671080 tactctgattatttttatgaaatttttatgttgggaaaatggggtgttacaa 19671029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 20320196 - 20320238
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccat 88  Q
    |||||||| ||||| |||||||||||||||||||||||||||||    
T  20320196 ttatgttg-ttgaattttgaaggaaaattagttaattattccat 20320238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 21178231 - 21178282
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    |||||||||||| |||||||||||||||| |||||||||  || ||||||||    
T  21178231 tactctgattatttttatgaaatttttatgttggaaaaacggggtgttacaa 21178282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 24316751 - 24316801
Alignment:
Q  63 gaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat 113  Q
    |||||| ||||| ||||||||||||| |||||| ||| |||||||||||||    
T  24316751 gaaggataattaattaattattccatttatgatttttaagaagtgtagcat 24316801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 836 - 874
Target Start/End: Original strand, 26165331 - 26165369
Alignment:
Q  836 tcctcctcacatagagaggtatatatttgtcaaatggag 874  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  26165331 tcctcctcatatagagagatatatatttgtcaaatggag 26165369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 26391737 - 26391687
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||| ||||| ||||||||||||||||||| ||||||    
T  26391737 ttatgttggttgaattttcaaggataattagttaattattccatttatgat 26391687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 32452831 - 32452881
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
    |||| ||||||| |||||||||||||||| |||||||||  ||||||||||    
T  32452831 tactttgattatttttatgaaatttttatgttggaaaaacgggatgttaca 32452881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 737
Target Start/End: Complemental strand, 2702327 - 2702258
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttctt 737  Q
    |||||||||||| ||||| |||||||| |||| || |||| ||||||||| || |||||||||| |||||    
T  2702327 agctggggttttggcactccttgtgctgaaatcttgaggctttcagtattttaatccattttagtttctt 2702258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 21083157 - 21083198
Alignment:
Q  54 ttgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||    
T  21083157 ttgaattttgaaggataattagttaattattccatttatgat 21083198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 23004076 - 23003999
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||||||||||| | ||||||| || |  ||| ||||||||| |||||| ||| |||||||||||| |||||||||    
T  23004076 ttatgttgattgaattatgaaggataaatttttatttattccatttatgatttttaagaagtgtagcattccgtttat 23003999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 24435186 - 24435149
Alignment:
Q  131 actctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  24435186 actctgattatttttatgaaatttttatgttggaaaaa 24435149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 24866311 - 24866364
Alignment:
Q  128 attactctgattatctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    |||||| ||||||| |  ||||||||||||| ||||||||||||| ||||||||    
T  24866311 attactttgattatttgaatgaaatttttatgttggaaaaatagggtgttacaa 24866364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 181
Target Start/End: Complemental strand, 25106223 - 25106082
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgatt 139  Q
    ||||||||||||| || |   ||||||| || | |||| ||||||||| |||||| ||| ||||| ||||||| |||||||| | || |  ||||||||     
T  25106223 atatttatgttgactggatcatgaaggataaattgttatttattccatttatgatttttaagaagggtagcattccgtttatgtgttgaacactctgata 25106124  T
Q  140 atctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    ||  ||||||||||||||| |||| ||||  || ||||||||    
T  25106123 attgttatgaaatttttatgttgggaaaacggggtgttacaa 25106082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 41524043 - 41524080
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaa 167  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  41524043 tactctgattatttttatgaaatttttatgttggaaaa 41524080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 119; Significance: 2e-60; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 41 - 183
Target Start/End: Original strand, 18836 - 18978
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgatta 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  18836 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccatttatatgtgaattactctgatta 18935  T
Q  141 tctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||    
T  18936 tctttatgaaatttttatcttgggaaaacagggtgttacaatt 18978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 167
Target Start/End: Original strand, 40938 - 41044
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaatttttatc 159  Q
    |||||||| ||||||||||||||  ||| ||||| ||| ||||||||||||| ||||||||||| || | |||||| || || | | ||||||||||||     
T  40938 ttgaaggataattagttaattatctcatttatga-cttctagaagtgtagcattccgtttatatgttgaatactctaataatatgtttgaaatttttata 41036  T
Q  160 ttggaaaa 167  Q
    ||||||||    
T  41037 ttggaaaa 41044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 18332 - 18376
Alignment:
Q  8 gatgttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||    
T  18332 gatgttatgatattgttatatgtgatttatatgatgtttatgttg 18376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 80392 - 80445
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    |||||||||||| |||||||||||||||| |||| ||||  || ||||||||||    
T  80392 tactctgattatttttatgaaatttttatgttgggaaaacggggtgttacaatt 80445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 1e-58; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 32120754 - 32120627
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgatta 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  32120754 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatgtgaattactctgatta 32120655  T
Q  141 tctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||||||||||| ||||    
T  32120654 tctttatgaaatttttatcttgggaaaa 32120627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 41 - 165
Target Start/End: Complemental strand, 14592051 - 14591926
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || |||||||| | |||||||||||||    
T  14592051 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtacgatcttttagaagtgtaacattctgtttatatgtgaattactctgatt 14591952  T
Q  140 atctttatgaaatttttatcttggaa 165  Q
    ||||||||||||||||||||||||||    
T  14591951 atctttatgaaatttttatcttggaa 14591926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 29333061 - 29333181
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgatta 140  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||     
T  29333061 atatttatgtttattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtaacatccgtttatatgtgaattactctgattt 29333160  T
Q  141 tctttatgaaatttttatctt 161  Q
    ||||||||||||| |||||||    
T  29333161 tctttatgaaattgttatctt 29333181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 45 - 181
Target Start/End: Original strand, 17440352 - 17440488
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatct 143  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||| |   ||  ||||||||||| |    
T  17440352 ttatgttgattgaactttgaaggaaaattagttaattattccatttatgatttttaagaagtgtagcattccgtttatgtggaaa--actctgattattt 17440449  T
Q  144 -ttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
     ||||||||||||||| |||| ||||  |||||||||||    
T  17440450 gttatgaaatttttatgttgggaaaacgggatgttacaa 17440488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 19155719 - 19155830
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatct 143  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||  |||||  |||||||||||||| |    
T  19155719 ttatgttgattgaactttgaaggaaaattagttaattattccatttatgatttttaagaagtgtagcattccgtt--tatatggattactctgattattt 19155816  T
Q  144 ttatgaaattttta 157  Q
      ||||||||||||    
T  19155817 aaatgaaattttta 19155830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 22420241 - 22420379
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatct 143  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||  || ||||||| | | |  |||||||||||||| |    
T  22420241 ttatgttgattgaactttgaaggaaaattagttaattattccatttatgatttttaagaagtgtgacattccgttt-tgtgtggattactctgattattt 22420339  T
Q  144 ttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
      ||||||||||||| |||| ||||  || ||||||||||    
T  22420340 aaatgaaatttttatgttgggaaaacggggtgttacaatt 22420379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 17462234 - 17462360
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||| |||||| ||| ||||||||  || ||||||  ||| |  ||||||||||||    
T  17462234 atatttatgttgattgaaatttgaagaaaaattagttaattattccatttatgatttttaagaagtgtgacattccgtt--tatgtggattactctgatt 17462331  T
Q  140 atctttatgaaatttttatcttggaaaaa 168  Q
    || |  ||||||||||||| |||| ||||    
T  17462332 atttaaatgaaatttttatgttgggaaaa 17462360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 12576196 - 12576132
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaatta-ttccatgtatgatcttttagaagtgt 108  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||||| ||| ||||||||    
T  12576196 ttatgttgattgaactttgaaggaaaattagttaattatttccgtttatgatttttaagaagtgt 12576132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 16414019 - 16414063
Alignment:
Q  8 gatgttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  16414019 gatgttatgatattgttatatgtgatgaatatgatgtttatgttg 16414063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 32121256 - 32121212
Alignment:
Q  8 gatgttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  32121256 gatgttatgatattgttatatgtgatgaatatgatgtttatgttg 32121212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 664 - 738
Target Start/End: Complemental strand, 9932170 - 9932095
Alignment:
Q  664 tttttagctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    |||| ||||||| |||| |||||||||||||| |||| ||||||| |||| || ||||||||||||||||||||||    
T  9932170 ttttcagctgggtttttagcacttcttgtgctgaaatattcaggcgttcaataatatattccattttagcttcttc 9932095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 35027659 - 35027705
Alignment:
Q  47 atgttgattgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||    
T  35027659 atgttgattgaactttgaaggaaaattagttaattatttcatttatg 35027705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 43111300 - 43111260
Alignment:
Q  53 attgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  43111300 attgaactttgaaggaaaattagttaattattccatttatg 43111260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 664 - 738
Target Start/End: Complemental strand, 25582655 - 25582580
Alignment:
Q  664 tttttagctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    |||| ||||||  |||| |||||||||||||| |||| ||||||| ||||||| ||||||||||||||| ||||||    
T  25582655 ttttcagctggatttttagcacttcttgtgctgaaatattcaggcgttcagtaatatattccattttagtttcttc 25582580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 32806856 - 32806752
Alignment:
Q  64 aaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatct-ttatgaaatttttatctt 161  Q
    ||||| ||||| ||||||||||||| |||||| ||| |||||||||||| ||||||||| ||  ||  ||||||||||| | ||||||||||||||| ||    
T  32806856 aaggataattaattaattattccatttatgatttttgagaagtgtagcattccgtttatgtagaaa--actctgattatttgttatgaaatttttatgtt 32806759  T
Q  162 ggaaaaa 168  Q
    || ||||    
T  32806758 gggaaaa 32806752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 20402380 - 20402330
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
    |||||||||||| |||||||||||||||| |||||||||| || |||||||    
T  20402380 tactctgattatttttatgaaatttttatgttggaaaaatggggtgttaca 20402330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 21589492 - 21589554
Alignment:
Q  60 tttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    ||||||||| ||||||||||| ||||||| |||||| ||| |||||||||||| |||||||||    
T  21589492 tttgaaggataattagttaataattccatttatgatttttaagaagtgtagcattccgtttat 21589554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 20047382 - 20047434
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaat 182  Q
    |||||||||||| |||||||||||||||| |||||||||  || |||||||||    
T  20047382 tactctgattatttttatgaaatttttatgttggaaaaacggggtgttacaat 20047434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 20458667 - 20458611
Alignment:
Q  127 aattactctgattatctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    ||||||||||||||| |||||||||||||||  |||||||||  || ||||||||||    
T  20458667 aattactctgattatttttatgaaatttttacgttggaaaaacggggtgttacaatt 20458611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 20493495 - 20493427
Alignment:
Q  101 agaagtgtagcat-ccgtttatatattaattactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||| |||||||| |||| ||||||||||| ||  ||||||||||||||| | |||||||    
T  20493495 agaagtgtagcattccgtttatgtattgattactctgataattattatgaaatttttatgtcggaaaaa 20493427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 20534227 - 20534286
Alignment:
Q  45 ttatgttgattgaa-ctttgaaggaaaattagttaattattccatgtatgatcttttagaa 104  Q
    |||||||||||||| |||||||||| ||||||||||||||||||  |||||| ||||||||    
T  20534227 ttatgttgattgaaactttgaaggataattagttaattattccacttatgat-ttttagaa 20534286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 22995118 - 22995071
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    |||||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  22995118 ttatgttg-ttgaattttgaaggaaaattagttaattattccatttatg 22995071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 23761689 - 23761796
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaatttttatc 159  Q
    |||||||| ||||||||||||||  ||| ||||| ||||||||||||||||| ||||||||||  || | ||||||||| || | | |||||||| |||     
T  23761689 ttgaaggataattagttaattatctcatttatga-cttttagaagtgtagcattccgtttatacgttgaatactctgataatatgtttgaaatttatata 23761787  T
Q  160 ttggaaaaa 168  Q
    |||| ||||    
T  23761788 ttgggaaaa 23761796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 19883792 - 19883754
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  19883792 tactctgattatttttatgaaatttttatgttggaaaaa 19883754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 24487174 - 24487212
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  24487174 tactctgattatttttatgaaatttttatgttggaaaaa 24487212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 41597420 - 41597322
Alignment:
Q  70 aattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||  ||| |||||| ||| ||||||||||||| |  |||| | || | ||||||||| ||  ||||||||||||||| |||| ||||    
T  41597420 aattagttaattatctcatttatgatttttaagaagtgtagcattccgttatgtgttgaatactctgataattgttatgaaatttttatgttgggaaaa 41597322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 45291612 - 45291710
Alignment:
Q  70 aattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||  ||| |||||| ||| ||||||||||||| |  |||| | || | ||||||||| ||  ||||||||||||||| |||| ||||    
T  45291612 aattagttaattatctcatttatgatttttaagaagtgtagcattccgttatgtgttgaatactctgataattgttatgaaatttttatgttgggaaaa 45291710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 21672915 - 21672803
Alignment:
Q  71 attagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaatttttatcttggaaaaat 169  Q
    |||||||||||||  ||| ||||| ||||||||||||||||| ||||||||| | || | ||||||||| || | | |||||||||||  |||| ||||     
T  21672915 attagttaattatcgcatttatga-cttttagaagtgtagcattccgtttatgtgttgaatactctgataatatgtttgaaatttttaagttgggaaaac 21672817  T
Q  170 aggatgttacaatt 183  Q
     || ||||||||||    
T  21672816 ggggtgttacaatt 21672803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 24352307 - 24352226
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||||| ||||||||| | ||||||| || | |||| ||||||||| || ||| ||| |||||||||||| |||||||||    
T  24352307 atatttattttgattgaattatgaaggataaattgttatttattccatttacgatttttaagaagtgtagcattccgtttat 24352226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 1e-58; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 24274049 - 24273922
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgatta 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  24274049 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatgtgaattactctgatta 24273950  T
Q  141 tctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||||||||||| ||||    
T  24273949 tctttatgaaatttttatcttgggaaaa 24273922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 18422778 - 18422651
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgatta 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  18422778 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatgtgaattactctgatta 18422679  T
Q  141 tctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||| ||||||||| ||||    
T  18422678 tctttatgaaattgttatcttgggaaaa 18422651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 41 - 183
Target Start/End: Complemental strand, 14272400 - 14272259
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||  || ||||||  ||| |  ||||||||||||    
T  14272400 atatttatgttgattgaactttgaaggaaaattagttaattattccatttatgatttttaagaagtgtgacattccgtt--tatgtcgattactctgatt 14272303  T
Q  140 atctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    || |  ||||||||||||| |||| ||||| |||||||||||||    
T  14272302 atttaaatgaaatttttatgttgggaaaatgggatgttacaatt 14272259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 669 - 738
Target Start/End: Original strand, 38142281 - 38142350
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttcttc 738  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38142281 agctggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatatttcattttagcttcttc 38142350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 669 - 738
Target Start/End: Original strand, 29626961 - 29627030
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttcttc 738  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  29626961 agctggggtttttgcacttcttgtgctaaaatttccaggcttcagtattatactccattttagcttcttc 29627030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 41 - 181
Target Start/End: Complemental strand, 14275185 - 14275046
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| || ||||||  ||| |  ||||||||||||    
T  14275185 atattaatgttgattgaactttgaaggaaaattagttaattattccatttatgatttttaagaagtgtaacattccgtt--tatgtcgattactctgatt 14275088  T
Q  140 atctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    || |  ||||||||||||| |||| ||||  || ||||||||    
T  14275087 atttaaatgaaatttttatgttgggaaaacggggtgttacaa 14275046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 41 - 180
Target Start/End: Original strand, 37794483 - 37794621
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||  || | ||||  | |  | |||||| |||||    
T  37794483 atatttatgttgattgaactttgaaggaaaattagttaattattccatttatgatttttaagaagtgtgacattgcgtt--tgtgatgattactttgatt 37794580  T
Q  140 atctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
    || |||||||||||||||| |||| ||||  ||||||||||    
T  37794581 atttttatgaaatttttatgttgggaaaacgggatgttaca 37794621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 43 - 180
Target Start/End: Original strand, 1491361 - 1491497
Alignment:
Q  43 atttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattat 141  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||| ||||||||  || ||||||  ||| |  ||||||||||||||    
T  1491361 atttatgttgattgaactttgaaagaaaattagttaattattccatttatgatttttaagaagtgtgacattccgtt--tatgtggattactctgattat 1491458  T
Q  142 ctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
     |  ||||||||||||| |||| |||| ||| |||||||    
T  1491459 ttaaatgaaatttttatgttgggaaaacagggtgttaca 1491497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 16997637 - 16997497
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||  || ||||||  ||| |  ||||||||||||    
T  16997637 atatttatgttgattgaactttgaaggaaaattaattaattattccatttatgatttttaagaagtgtgacattccgtt--tatgtggattactctgatt 16997540  T
Q  140 atctttatgaaatttttatcttggaaaaataggatgttacaat 182  Q
    || |  ||||||||||||| |||| ||||  || |||||||||    
T  16997539 atttaaatgaaatttttatgttgggaaaacggggtgttacaat 16997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 669 - 738
Target Start/End: Complemental strand, 29125914 - 29125845
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttcttc 738  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||| |||||||    
T  29125914 agctggggtttttgcacttcttgtgctaaaatttccaagcttcagtaatatattccattttaacttcttc 29125845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 672 - 738
Target Start/End: Complemental strand, 18299512 - 18299446
Alignment:
Q  672 tggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttcttc 738  Q
    |||||||||||||||||||||||| || ||| |||||||||||| ||||||||||||||||||||||    
T  18299512 tggggtttttgcacttcttgtgctgaactttccaggcttcagtaatatattccattttagcttcttc 18299446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 669 - 738
Target Start/End: Original strand, 15669726 - 15669795
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttcttc 738  Q
    |||||||||||||||||||||| |||| |||||| |||||||||||| |||||||||||||| |||||||    
T  15669726 agctggggtttttgcacttcttatgctgaaatttccaggcttcagtaatatattccattttaacttcttc 15669795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 16572479 - 16572431
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16572479 ttatgttgattgaactttgaaggaaaattagttaattattccatttatg 16572431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 16593183 - 16593231
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16593183 ttatgttgattgaactttgaaggaaaattagttaattattccatttatg 16593231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 670 - 738
Target Start/End: Original strand, 32575504 - 32575569
Alignment:
Q  670 gctggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttcttc 738  Q
    ||||||||||||||||||   ||||| ||||||||||||||||||| |||||||||||||| |||||||    
T  32575504 gctggggtttttgcactt---gtgctgaaattttcaggcttcagtaatatattccattttaccttcttc 32575569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 11084674 - 11084621
Alignment:
Q  60 tttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat 113  Q
    |||||||||||||||||||||||||||||||||||| ||| | |||||||||||    
T  11084674 tttgaaggaaaattagttaattattccatgtatgatttttaaaaagtgtagcat 11084621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 24274605 - 24274561
Alignment:
Q  8 gatgttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  24274605 gatgttatgatattgttatatgtgatgaatatgatgtttatgttg 24274561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 11092426 - 11092373
Alignment:
Q  60 tttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat 113  Q
    ||||||||||||||| ||||||||||||| |||||| ||| |||||||||||||    
T  11092426 tttgaaggaaaattatttaattattccatttatgatttttaagaagtgtagcat 11092373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 20220978 - 20221059
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||||||||||||||| | ||||||| || | |||| ||||||||| |||||| ||| |||||||||||| |||||||||    
T  20220978 atatttatgttgattgaattatgaaggataaattgttatttattccatttatgatttttaagaagtgtagcattccgtttat 20221059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 9391060 - 9391155
Alignment:
Q  62 tgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaattttta 157  Q
    ||||||| ||||||||||||||  ||| |||||| |||||||||||||||| |||||||||||  | ||||||||||| || | | |||||||||||    
T  9391060 tgaaggataattagttaattatctcatttatgat-ttttagaagtgtagcattccgtttatatgcttattactctgataatatgtttgaaattttta 9391155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 17018244 - 17018292
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  17018244 ttatgttgaatgaattttgaaggaaaattagttaattattccatttatg 17018292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 62338 - 62380
Alignment:
Q  53 attgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  62338 attgaattttgaaggaaaattagttaattattccatttatgat 62380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 9178467 - 9178594
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    |||||||||||||||||| | ||| ||| || | |||| ||||||||| |||||| ||| |||||||||||| ||||||||| |   ||  |||||||||    
T  9178467 atatttatgttgattgaattatgagggataaattgttatttattccatttatgatttttaagaagtgtagcattccgtttatgtggaaa--actctgatt 9178564  T
Q  140 atct-ttatgaaatttttatcttggaaaaa 168  Q
    || | ||||||||||||||| |||| ||||    
T  9178565 atttgttatgaaatttttatgttgggaaaa 9178594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 738
Target Start/End: Original strand, 9948957 - 9949031
Alignment:
Q  665 ttttagctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    |||||||||||||||| | ||| |||||||| |||| ||||||| ||||||||| || |||||||||| ||||||    
T  9948957 ttttagctggggttttggtactccttgtgctgaaatcttcaggctttcagtattttaatccattttagtttcttc 9949031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 738
Target Start/End: Original strand, 11621395 - 11621465
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    |||||||||||| ||||| |||||||| |||| | ||||| ||||||| |||| |||||||||||||||||    
T  11621395 agctggggttttggcactccttgtgctgaaatctccaggctttcagtaatataatccattttagcttcttc 11621465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 738
Target Start/End: Complemental strand, 28782088 - 28782014
Alignment:
Q  665 ttttagctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    |||||||||||||||| ||||| |||||||| |||| | ||||| ||||||||| || |||||||||| ||||||    
T  28782088 ttttagctggggttttggcactccttgtgctgaaatctccaggctttcagtattttaatccattttagtttcttc 28782014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 20486292 - 20486239
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    |||||||||||| |||||||||||||||| |||| ||||  |||||||||||||    
T  20486292 tactctgattatttttatgaaatttttatgttgggaaaaccggatgttacaatt 20486239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 44013468 - 44013372
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaattttta 157  Q
    |||||||| ||||||||||||||  ||| ||||| ||||||||||||||||| ||||||||| | || | ||||||||| || | | |||||||||||    
T  44013468 ttgaaggataattagttaattatctcatttatga-cttttagaagtgtagcattccgtttatgtgttgaatactctgataatatgtttgaaattttta 44013372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 9321066 - 9321163
Alignment:
Q  71 attagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatct-ttatgaaatttttatcttggaaaaa 168  Q
    |||||||||||||||||| |||||| ||| |||||||||||| ||||||||| |   ||  ||||||||||| | ||||||||||||||| |||| ||||    
T  9321066 attagttaattattccatttatgatttttgagaagtgtagcattccgtttatgtggaaa--actctgattatttgttatgaaatttttatgttgggaaaa 9321163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 12429948 - 12429897
Alignment:
Q  129 ttactctgattatctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    ||||||||||||| |||||||||||||||| |||||||||| || ||||||||    
T  12429948 ttactctgattat-tttatgaaatttttatgttggaaaaatggggtgttacaa 12429897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 95
Target Start/End: Original strand, 30822851 - 30822886
Alignment:
Q  60 tttgaaggaaaattagttaattattccatgtatgat 95  Q
    ||||||||||||||||||||||||||||| ||||||    
T  30822851 tttgaaggaaaattagttaattattccatttatgat 30822886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 18004926 - 18004831
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaattttta 157  Q
    |||||||| ||||||||||||||  ||| |||||  |||||||||||||||| | ||||||| | || |||||||||||||   || |||||||||||    
T  18004926 ttgaaggataattagttaattatctcatttatga--ttttagaagtgtagcatttcgtttatgtgttgattactctgattaatgttttgaaattttta 18004831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 21190603 - 21190653
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
    |||||||||||| |||||||||||||||| |||| ||||  ||||||||||    
T  21190603 tactctgattatttttatgaaatttttatgttgggaaaacgggatgttaca 21190653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 23969789 - 23969827
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  23969789 tactctgattatttttatgaaatttttatgttggaaaaa 23969827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 29329794 - 29329892
Alignment:
Q  70 aattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||  ||| |||||| ||| ||||||||||||| |  |||| | || | ||||||||| ||  ||||||||||||||| |||| ||||    
T  29329794 aattagttaattatctcatttatgatttttaagaagtgtagcattccgttatgtgttgaatactctgataattgttatgaaatttttatgttgggaaaa 29329892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 9034218 - 9034271
Alignment:
Q  128 attactctgattatctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    |||||||||||||| | |||||||||||||| |||||||||  || ||||||||    
T  9034218 attactctgattatttatatgaaatttttatattggaaaaacggggtgttacaa 9034271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 13850869 - 13850910
Alignment:
Q  127 aattactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||| |||||||||||||||| |||| ||||    
T  13850869 aattactctgattatttttatgaaatttttatgttgggaaaa 13850910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 16220572 - 16220632
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||||| ||||||||||||||  ||| |||||| |||||||||||||||| |||||||||    
T  16220572 ttgaaggataattagttaattatctcatttatgat-ttttagaagtgtagcattccgtttat 16220632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 16551995 - 16552036
Alignment:
Q  54 ttgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||    
T  16551995 ttgaattttgaaggataattagttaattattccatttatgat 16552036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 16613667 - 16613626
Alignment:
Q  54 ttgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||    
T  16613667 ttgaattttgaaggataattagttaattattccatttatgat 16613626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 18076429 - 18076470
Alignment:
Q  127 aattactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||| |||||||||||||||| |||| ||||    
T  18076429 aattactctgattatttttatgaaatttttatgttgggaaaa 18076470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 18300660 - 18300607
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    ||||||| |||| |||||||||||||||| |||| ||||| || ||||||||||    
T  18300660 tactctggttatttttatgaaatttttatgttgggaaaatggggtgttacaatt 18300607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 738
Target Start/End: Original strand, 19324294 - 19324323
Alignment:
Q  709 ttcagtattatattccattttagcttcttc 738  Q
    ||||||||||||||||||||||||||||||    
T  19324294 ttcagtattatattccattttagcttcttc 19324323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 48990495 - 48990446
Alignment:
Q  45 ttatgttga-ttgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    ||||||||| ||||||||||| ||||||||||||||||||| ||| ||||    
T  48990495 ttatgttgaattgaactttgatggaaaattagttaattatttcatttatg 48990446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 1e-58; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 34962392 - 34962265
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgatta 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  34962392 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatgtgaattactctgatta 34962293  T
Q  141 tctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||||||||||| ||||    
T  34962292 tctttatgaaatttttatcttgggaaaa 34962265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 669 - 738
Target Start/End: Original strand, 7093964 - 7094033
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttcttc 738  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  7093964 agctggggtttttgcacttcttgtgctaaaatttccagacttcagtattatattccattttaacttcttc 7094033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 27849962 - 27849899
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgt 108  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||  |||||||    
T  27849962 ttatgttgattgaactttgaaggaaaattagttaattattccatttatgatttttatgaagtgt 27849899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 45 - 181
Target Start/End: Complemental strand, 14247193 - 14247058
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgattatctt 144  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||  |||||||  ||| |  || | |  | |||||||||||||| ||    
T  14247193 ttatgttgattgaactttgaaggagaattagttaattattccatttatgatttttatgaagtgtgacattccatt-tgtgatgattactctgattatttt 14247095  T
Q  145 tatgaaatttttatcttggaaaaataggatgttacaa 181  Q
     ||||||||||||  |||| |||| ||| ||||||||    
T  14247094 aatgaaatttttaagttgggaaaacagggtgttacaa 14247058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 181
Target Start/End: Original strand, 20735416 - 20735552
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaatta-ttccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatc 142  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||||| ||| ||||||||  || |||||||   |  | |||| |||||||||     
T  20735416 ttatgttgattgaactttgaaggaaaattagttaattatttccgtttatgatttttaagaagtgtgacattccgttt-cgtgatgattattctgattat- 20735513  T
Q  143 tttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    |||||||||||||||| |||||||||  || ||||||||    
T  20735514 tttatgaaatttttatgttggaaaaacggggtgttacaa 20735552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 669 - 738
Target Start/End: Complemental strand, 7734145 - 7734076
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttcttc 738  Q
    |||||||||||||||||| |||||||| |||||| |||||| ||||| |||||| |||||||| ||||||    
T  7734145 agctggggtttttgcactacttgtgctgaaatttacaggctgcagtaatatatttcattttagtttcttc 7734076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 23992031 - 23991987
Alignment:
Q  8 gatgttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  23992031 gatgttatgatattgttatatgtgatgaatatgatgtttatgttg 23991987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 35007418 - 35007354
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaatta-ttccatgtatgatcttttagaagtgt 108  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||||| ||| ||||||||    
T  35007418 ttatgttgattgaactttgaaggaaaattagttaattatttccgtttatgatttttaagaagtgt 35007354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 669 - 738
Target Start/End: Original strand, 1840643 - 1840713
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    ||||||| |||| |||||||||||||| |||| || |||| ||||||| ||||||||||||||||||||||    
T  1840643 agctgggtttttagcacttcttgtgctgaaatatttaggcgttcagtaatatattccattttagcttcttc 1840713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 18897143 - 18897192
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatga 94  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  18897143 ttatgttgattgaattttgaaggataattagttaattattccatttatga 18897192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 18926829 - 18926691
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    |||||||||||||||||| | |||| || || | |||| ||||||||| |||||| ||| |||||||||||| ||||||  | | || | ||||||||||    
T  18926829 atatttatgttgattgaattatgaaagataaattgttatttattccatttatgatttttaagaagtgtagcattccgtt--tgtgttgaatactctgatt 18926732  T
Q  140 atctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
    || |  ||||||||||||| |||| ||||| || |||||||    
T  18926731 atttaaatgaaatttttatgttgggaaaatggggtgttaca 18926691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 24795163 - 24795108
Alignment:
Q  675 ggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccatttta 730  Q
    |||||| |||||||||||| |||||||||||| |||||||| |||||| |||||||    
T  24795163 ggttttggcacttcttgtgttaaaattttcagacttcagtaatatatttcatttta 24795108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 180
Target Start/End: Complemental strand, 2200679 - 2200562
Alignment:
Q  63 gaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgattatct-ttatgaaatttttatctt 161  Q
    |||||| ||||||||||||||||||| |||||| ||| ||| ||||||||| | ||| ||| |  |  ||||||||||| | ||||||||||||||| ||    
T  2200679 gaaggataattagttaattattccatttatgatttttgagatgtgtagcattccttt-tatgtggaaaactctgattatttgttatgaaatttttatgtt 2200581  T
Q  162 ggaaaaataggatgttaca 180  Q
    || |||| ||| |||||||    
T  2200580 gggaaaacagggtgttaca 2200562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 15688681 - 15688758
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||||||||  | ||||||||| |||||||||||||||| || ||| || ||| |||||||||||| |||||||||    
T  15688681 ttatgttgattatattttgaaggataattagttaattattctatttataatttttaagaagtgtagcattccgtttat 15688758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 20223220 - 20223088
Alignment:
Q  53 attgaactttgaaggaaaattagttaattattccatgtatgatcttt---tagaagtgtagcat-ccgtttatatattaattactctgattatctttatg 148  Q
    |||||| ||||||||| ||||||||||||||||||| ||| || ||    |||||||||  ||| |||||||| |   ||  ||||||||||| ||||||    
T  20223220 attgaattttgaaggataattagttaattattccatttataattttaagatagaagtgtgacattccgtttatgtggaaa--actctgattatttttatg 20223123  T
Q  149 aaatttttatcttggaaaaataggatgttacaatt 183  Q
    |||||||||| |||| |||||||  ||||||||||    
T  20223122 aaatttttatgttgggaaaatagtgtgttacaatt 20223088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 22117204 - 22117072
Alignment:
Q  53 attgaactttgaaggaaaattagttaattattccatgtatgatcttt---tagaagtgtagcat-ccgtttatatattaattactctgattatctttatg 148  Q
    |||||| ||||||||| ||||||||||||||||||| ||| || ||    |||||||||  ||| |||||||| |   ||  ||||||||||| ||||||    
T  22117204 attgaattttgaaggataattagttaattattccatttataattttaagatagaagtgtgacattccgtttatgtggaaa--actctgattatttttatg 22117107  T
Q  149 aaatttttatcttggaaaaataggatgttacaatt 183  Q
    |||||||||| |||| |||||||  ||||||||||    
T  22117106 aaatttttatgttgggaaaatagtgtgttacaatt 22117072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 23351118 - 23351078
Alignment:
Q  53 attgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  23351118 attgaactttgaagtaaaattagttaattattccatttatg 23351078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 27574141 - 27574201
Alignment:
Q  53 attgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat 113  Q
    |||||| ||||| ||| ||||||||||||||||| | |||||| ||| |||||||||||||    
T  27574141 attgaattttgatggataattagttaattattccgtttatgatttttaagaagtgtagcat 27574201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 34962890 - 34962850
Alignment:
Q  12 ttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  34962890 ttatgatattgttatatgtgattaatatgatgtttatgttg 34962850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 15175569 - 15175618
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  15175569 ttatgttg-ttgaattttgaaggataattagttaattattccatttatgat 15175618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 15903051 - 15903100
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  15903051 ttatgttg-ttgaattttgaaggataattagttaattattccatttatgat 15903100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 9468952 - 9468903
Alignment:
Q  131 actctgattatctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
    ||||||||||| |||||||||||||||| |||| ||||  ||||||||||    
T  9468952 actctgattatttttatgaaatttttatgttgggaaaacgggatgttaca 9468903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 18179445 - 18179392
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    |||||||||||| |||||||||||||||| |||| ||||  || ||||||||||    
T  18179445 tactctgattatttttatgaaatttttatgttgggaaaacggggtgttacaatt 18179392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 18897236 - 18897277
Alignment:
Q  127 aattactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||| |||||||||||||||  |||||||||    
T  18897236 aattactctgattatttttatgaaatttttaagttggaaaaa 18897277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 23018667 - 23018559
Alignment:
Q  60 tttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaatttttat 158  Q
    ||||||||| ||||||||||||||  ||| |||||| |||| ||||||||||| ||| | ||| | || ||||||||||| |   || ||||||||||||    
T  23018667 tttgaaggataattagttaattatctcatttatgat-tttttgaagtgtagcattccatatatgtgttgattactctgataaatgttttgaaatttttat 23018569  T
Q  159 cttggaaaaa 168  Q
     |||||||||    
T  23018568 gttggaaaaa 23018559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 113; Significance: 9e-57; HSPs: 2)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 41 - 181
Target Start/End: Original strand, 5448 - 5588
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgatta 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  5448 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccatttatatgtgaattactctgatta 5547  T
Q  141 tctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    ||||||||||||||||||||||| ||||  || ||||||||    
T  5548 tctttatgaaatttttatcttgggaaaacggggtgttacaa 5588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 95
Target Start/End: Complemental strand, 9883 - 9848
Alignment:
Q  60 tttgaaggaaaattagttaattattccatgtatgat 95  Q
    ||||||||||||||||||||||||||||| ||||||    
T  9883 tttgaaggaaaattagttaattattccatttatgat 9848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 4e-56; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 46821235 - 46821108
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgatta 140  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  46821235 atatttatgttgattgaactttgaagaaaaattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatgtgaattactctgatta 46821136  T
Q  141 tctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||||||||||| ||||    
T  46821135 tctttatgaaatttttatcttgggaaaa 46821108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 15448829 - 15448901
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat 113  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | |||||| |||  ||||||||||||    
T  15448829 atatttatgttgatcgaactttgaaggaaaattagttaattattccctttatgatttttatgaagtgtagcat 15448901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 23432029 - 23432092
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgt 108  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||  |||||||    
T  23432029 ttatgttgattgaactttgaaggaaaattagttaattattccatttatgatttttatgaagtgt 23432092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 665 - 738
Target Start/End: Complemental strand, 53458980 - 53458907
Alignment:
Q  665 ttttagctggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttcttc 738  Q
    ||||||||| ||||||||||||||||||| | |||||||||| ||| |||| |||||||||||||| |||||||    
T  53458980 ttttagctgaggtttttgcacttcttgtgttgaaattttcagactttagtaatatattccattttaccttcttc 53458907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 43925237 - 43925109
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    |||||||||||||||||| | ||||||| || | |||| ||||||||| |||||| ||| ||||||||| || ||||||||| | || | |||||||||     
T  43925237 atatttatgttgattgaattatgaaggataaattgttatttattccatttatgatttttaagaagtgtaacattccgtttatgtgttgaatactctgata 43925138  T
Q  140 atctttatgaaatttttatcttggaaaaa 168  Q
    ||  ||||||||||||||| |||| ||||    
T  43925137 attgttatgaaatttttatgttgggaaaa 43925109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 11258041 - 11257999
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattcca 87  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11258041 ttatgttgattgaactttgaaggaaaattagttaattattcca 11257999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 12268468 - 12268371
Alignment:
Q  60 tttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgattatctttatgaaattttta 157  Q
    ||||||||| ||||||||||||||  ||| |||||| ||||||||||||||||| |||||||||| || ||||||||||| || | | |||||||||||    
T  12268468 tttgaaggataattagttaattatctcatttatgat-ttttagaagtgtagcattccgtttatatgttgattactctgataatatgtttgaaattttta 12268371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 13543583 - 13543539
Alignment:
Q  8 gatgttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  13543583 gatgttatgatattgttatatgtgatgaatatgatgtttatgttg 13543539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 17043316 - 17043196
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||| ||| || ||| ||||||||  || ||||||  ||| |  ||||||||||||    
T  17043316 atatttatgttgattgaactttgaa-gaaaattagttaattatttcatttataatttttaagaagtgtgacattccgtt--tatgtggattactctgatt 17043220  T
Q  140 atctttatgaaatttttatcttgg 163  Q
    || |  ||||||||||||| ||||    
T  17043219 atttaaatgaaatttttatgttgg 17043196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 46821734 - 46821690
Alignment:
Q  8 gatgttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  46821734 gatgttatgatattgttatatgtgatgaatatgatgtttatgttg 46821690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 664 - 738
Target Start/End: Complemental strand, 10436504 - 10436429
Alignment:
Q  664 tttttagctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    |||| ||||||  |||| |||||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||    
T  10436504 ttttcagctggatttttagcacttcttgtgctgaaatattcaggcgttcagtaatatattccattttagcttcttc 10436429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 21836591 - 21836474
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    |||||| ||||||||||| | ||||||| |  | |||| ||||||||| |||||  ||| |||||||||||| ||||||||||| || | |||||||||     
T  21836591 atatttttgttgattgaattatgaaggacatattgttatttattccatttatgaattttaagaagtgtagcattccgtttatatgttgaatactctgata 21836492  T
Q  140 atctttatgaaattttta 157  Q
    ||  ||||||||||||||    
T  21836491 attgttatgaaattttta 21836474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 315424 - 315376
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| ||||    
T  315424 ttatgttgaatgaactttgaaggaaaattagttaattataccatttatg 315376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 12537248 - 12537298
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
    |||||||||||| |||||||||||||||| |||||||||| || |||||||    
T  12537248 tactctgattatttttatgaaatttttatgttggaaaaatggggtgttaca 12537298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 33564291 - 33564217
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatcc 115  Q
    |||||||||||||||||| | |||| || || | |||| ||||||||| |||||| ||| |||||||||||||||    
T  33564291 atatttatgttgattgaattatgaaagataaattgttatttattccatttatgatttttaagaagtgtagcatcc 33564217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 49390968 - 49391063
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgattatctttatgaaattttta 157  Q
    |||||||| ||||||||||||||  ||| | ||||  |||||||||||||||| |||||||||| || ||||||||||| || | | |||||||||||    
T  49390968 ttgaaggataattagttaattatctcatttgtgat--tttagaagtgtagcattccgtttatatgttgattactctgataatatgtttgaaattttta 49391063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 31225802 - 31225871
Alignment:
Q  53 attgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||| ||||| ||| ||||||||||||||||| | |||||| ||| |||||||||||| |||||||||    
T  31225802 attgaattttgatggataattagttaattattccgtttatgatttttaagaagtgtagcattccgtttat 31225871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 32404995 - 32405036
Alignment:
Q  127 aattactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  32404995 aattactctgattatttttatgaaatttttatgttggaaaaa 32405036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 1466758 - 1466865
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaatttttatc 159  Q
    |||||| | ||||||||||||||  ||| |||||| |||||||||||||||| |||||||||||  | |||||| |||| || | | |||||||||||      
T  1466758 ttgaagtataattagttaattatctcatttatgat-ttttagaagtgtagcattccgtttatatgctgattactttgataatatgtttgaaatttttaag 1466856  T
Q  160 ttggaaaaa 168  Q
    |||||||||    
T  1466857 ttggaaaaa 1466865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 32306967 - 32306860
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatc-cgtttatatattaattactctgattatctttatgaaatttttatc 159  Q
    |||||||| ||||||||||||||  ||| ||||| |||||||||||||| |||  ||||||| | || | |||||||||||| | | |||||||||||      
T  32306967 ttgaaggataattagttaattatctcatttatga-cttttagaagtgtaacatttcgtttatgtgttgaatactctgattatatgtttgaaatttttaag 32306869  T
Q  160 ttggaaaaa 168  Q
    |||||||||    
T  32306868 ttggaaaaa 32306860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 41123072 - 41123020
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaat 182  Q
    |||||||||||| |||||||||||||||| |||||||||   |||||||||||    
T  41123072 tactctgattatttttatgaaatttttatgttggaaaaacgagatgttacaat 41123020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 6470361 - 6470412
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    |||||||||||| |||||| ||||||||| ||||||||| ||| ||||||||    
T  6470361 tactctgattatttttatgcaatttttatgttggaaaaacagggtgttacaa 6470412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 179
Target Start/End: Complemental strand, 15467167 - 15467050
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgattatctttatgaaatttttatc 159  Q
    |||||||| ||||||||||||||   || |||||| || | |||||||||||| |||||||||| || | ||||||||| || | | ||||||||||||     
T  15467167 ttgaaggataattagttaattatcttatttatgattttat-gaagtgtagcattccgtttatatgttgaatactctgat-atatgtttgaaatttttata 15467070  T
Q  160 ttggaaaaataggatgttac 179  Q
    |||||||||| || ||||||    
T  15467069 ttggaaaaatggggtgttac 15467050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 25225728 - 25225677
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    |||||||||||| |||||||||||||||| |||| ||||  |||||||||||    
T  25225728 tactctgattatttttatgaaatttttatgttgggaaaactggatgttacaa 25225677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 181
Target Start/End: Complemental strand, 28193986 - 28193875
Alignment:
Q  71 attagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgat-tatctttatgaaatttttatcttggaaaaat 169  Q
    ||||||||||||| |||| ||| || ||||||||||||||||| |  ||| || ||  ||||||||||  || |||||||||||||||  |||||||||     
T  28193986 attagttaattatcccatttattatattttagaagtgtagcattccgttaaatgttgtttactctgataaatatttatgaaatttttaagttggaaaaac 28193887  T
Q  170 aggatgttacaa 181  Q
     || ||||||||    
T  28193886 ggggtgttacaa 28193875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 37251990 - 37252069
Alignment:
Q  90 tatgatcttttagaagtgtagcatc-cgtttatatattaattactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    |||||| ||| |||||||||||||  ||||||| | || | ||||||||| ||| ||||||||||||||| |||||||||    
T  37251990 tatgatttttaagaagtgtagcatttcgtttatgtgttgaatactctgataatcgttatgaaatttttatgttggaaaaa 37252069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 12509690 - 12509640
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
    |||||||||||| |||||||||||||||| |||| |||| ||| |||||||    
T  12509690 tactctgattatttttatgaaatttttatgttgggaaaacagggtgttaca 12509640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 12854309 - 12854347
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  12854309 tactctgattatttttatgaaatttttatgttggaaaaa 12854347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 16977928 - 16977879
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  16977928 ttatgttg-ttgaattttgaaggataattagttaattattccatttatgat 16977879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 43399998 - 43399949
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  43399998 ttatgttg-ttgaattttgaaggataattagttaattattccatttatgat 43399949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 6807750 - 6807652
Alignment:
Q  70 aattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatct-ttatgaaatttttatcttggaaaa 167  Q
    ||||||||| ||||||||| |||||| ||| |||||||||||| ||||||||| | | ||  ||||||||||| | |||||||||||| || |||| |||    
T  6807750 aattagttatttattccatttatgatttttgagaagtgtagcattccgtttatgtgtaaa--actctgattatttgttatgaaattttgatgttgggaaa 6807653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 12334253 - 12334196
Alignment:
Q  131 actctgattatctttatgaaatttttatcttggaaaaataggatgttacaatttgcac 188  Q
    ||||||||||| |||||||||||||||| |||| ||||  || ||||||| |||||||    
T  12334253 actctgattatttttatgaaatttttatgttgggaaaacggggtgttacactttgcac 12334196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 12936489 - 12936574
Alignment:
Q  97 ttttagaagtgtagcat-ccgtttatatattaattactctgattatctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    ||||||||||||||||| |||||||| |  | |||||||||||||| | | |||||||||||  |||||||||  || ||||||||    
T  12936489 ttttagaagtgtagcattccgtttatgtgatgattactctgattatatgtttgaaatttttaagttggaaaaacggggtgttacaa 12936574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 16096652 - 16096556
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaattttta 157  Q
    ||||| || ||||||||||||||  ||| ||||| ||||||||||||||||| ||||||||| | || | ||||||||| || | | |||||||||||    
T  16096652 ttgaatgataattagttaattatctcatttatga-cttttagaagtgtagcattccgtttatgtgttgaatactctgataatatgtttgaaattttta 16096556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 17045959 - 17045918
Alignment:
Q  127 aattactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||| |||||||||||||||| |||| ||||    
T  17045959 aattactctgattatttttatgaaatttttatattgggaaaa 17045918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 17048119 - 17048078
Alignment:
Q  127 aattactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||| |||||||||||||||| |||| ||||    
T  17048119 aattactctgattatttttatgaaatttttatattgggaaaa 17048078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 97; Significance: 3e-47; HSPs: 2)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 3718 - 3590
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    |||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||    
T  3718 atatttttgttgattgaactttgaaataaaattagttaattattccatgtatgatcttttagaagtgtagcattccgtttatatgtgaattactctgatt 3619  T
Q  140 atctttatgaaatttttatcttggaaaaa 168  Q
    |||||||||||||||||||||||| ||||    
T  3618 atctttatgaaatttttatcttgggaaaa 3590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 4202 - 4158
Alignment:
Q  8 gatgttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    |||||||||||||| |||||||||||||||||||| |||||||||    
T  4202 gatgttatgatattcttatatgtgatgaatatgatgtttatgttg 4158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 3e-26; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 669 - 738
Target Start/End: Original strand, 15760005 - 15760074
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttcttc 738  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15760005 agctgggatttttgcacttcttgtgctaaaatttccaggcttcagtattatattccattttagcttcttc 15760074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 25264095 - 25264164
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatc 114  Q
    ||||||||||| || ||||||||| ||||||||||||||||||| ||||||  || ||||||||||||||    
T  25264095 ttatgttgattaaattttgaaggataattagttaattattccatttatgattcttaagaagtgtagcatc 25264164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 49999460 - 49999396
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaatta-ttccatgtatgatcttttagaagtgt 108  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||||| ||| ||||||||    
T  49999460 ttatgttgattgaactttgaaggaaaattagttaattatttccgtttatgatttttaagaagtgt 49999396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 14238974 - 14239016
Alignment:
Q  10 tgttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  14238974 tgttatgatattgttatatgtgatgaatatgatgtttatgttg 14239016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 664 - 737
Target Start/End: Original strand, 20505671 - 20505745
Alignment:
Q  664 tttttagctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttctt 737  Q
    |||| ||||||| |||| |||||||||||||| |||| ||||||| ||||||| |||||||||||||| ||||||    
T  20505671 ttttcagctgggtttttagcacttcttgtgctgaaatattcaggcgttcagtaatatattccattttaacttctt 20505745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 35983049 - 35983145
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaattttta 157  Q
    |||||||| ||||||||||||||  ||| |||||| |||||||||||||||| |||||||||||  | ||||||||||| || | | |||||||||||    
T  35983049 ttgaaggataattagttaattatctcatttatgat-ttttagaagtgtagcattccgtttatatgctgattactctgataatatgtttgaaattttta 35983145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 738
Target Start/End: Complemental strand, 19227956 - 19227886
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggctt-cagtattatattccattttagcttcttc 738  Q
    |||||||||||| ||||| |||||||| |||| | ||||||| ||||| |||| |||||||||||||||||    
T  19227956 agctggggttttggcactccttgtgctgaaatctccaggctttcagtaatataatccattttagcttcttc 19227886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 738
Target Start/End: Original strand, 26676911 - 26676981
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    ||||||| |||| |||||||||||||| |||| |||| || ||||||| ||||||||||||||| ||||||    
T  26676911 agctgggtttttagcacttcttgtgctgaaatattcatgcgttcagtaatatattccattttagtttcttc 26676981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 33680282 - 33680174
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatct-ttatgaaatttttat 158  Q
    |||||||| ||||||||||||||  | | ||||| ||||||||||||||||| ||||||||| | || ||||||||||| || | || ||||||||||||    
T  33680282 ttgaaggataattagttaattatctcgtttatga-cttttagaagtgtagcattccgtttatgtgttgattactctgataatatgttttgaaatttttat 33680184  T
Q  159 cttggaaaaa 168  Q
     |||| ||||    
T  33680183 gttgggaaaa 33680174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 8881710 - 8881605
Alignment:
Q  63 gaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatct-ttatgaaatttttatct 160  Q
    |||||| ||||||||||||||| ||| |||||| ||| |||||||||||| ||||||||| |   ||  ||||||||||| | ||||||||||||||| |    
T  8881710 gaaggataattagttaattatttcatttatgatttttgagaagtgtagcattccgtttatgtggaaa--actctgattatttgttatgaaatttttatgt 8881613  T
Q  161 tggaaaaa 168  Q
    ||| ||||    
T  8881612 tgggaaaa 8881605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 157
Target Start/End: Original strand, 20847951 - 20848039
Alignment:
Q  70 aattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgat-tatctttatgaaattttta 157  Q
    ||||||||||||||  ||| ||| || ||||||||||||||||| |  |||||| ||| ||||||||||  || |||||||||||||||    
T  20847951 aattagttaattatctcatttattatattttagaagtgtagcattccgttatatgttatttactctgataaatgtttatgaaattttta 20848039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 20240832 - 20240777
Alignment:
Q  127 aattactctgattatctttatgaaatttttatcttggaaaaataggatgttacaat 182  Q
    ||||||||||||||| |||||||||||||||| |||| ||||  || |||||||||    
T  20240832 aattactctgattatttttatgaaatttttatgttgggaaaacggggtgttacaat 20240777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 20915565 - 20915454
Alignment:
Q  70 aattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgat-tatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||  ||| ||| || ||||||||||||||||| |  |||||| ||  ||||||||||  || |||||||||||||||  |||| ||||    
T  20915565 aattagttaattatctcatttattatattttagaagtgtagcattccgttatatgttgtttactctgataaatgtttatgaaatttttaagttgggaaaa 20915466  T
Q  169 taggatgttaca 180  Q
    | || |||||||    
T  20915465 tggggtgttaca 20915454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 12754121 - 12754083
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  12754121 tactctgattatttttatgaaatttttatgttggaaaaa 12754083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 21534683 - 21534733
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    ||||||| |||||| ||||||||| ||||||||||||||||| | ||||||    
T  21534683 ttatgttaattgaattttgaaggataattagttaattattccgtttatgat 21534733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 23086619 - 23086570
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  23086619 ttatgttg-ttgaattttgaaggataattagttaattattccatttatgat 23086570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 46199547 - 46199596
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  46199547 ttatgttg-ttgaattttgaaggataattagttaattattccatttatgat 46199596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 50685925 - 50685843
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattcc-atgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||||||||||||||| | ||||||| || | |||| ||||||| || |||||| ||| |||||||||||| |||||||||    
T  50685925 atatttatgttgattgaattatgaaggataaattgttatttattccaatttatgatttttaagaagtgtagcattccgtttat 50685843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 52928821 - 52928898
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgat 138  Q
    |||||||| ||||||||||||||  ||| |||||| |||||||| ||||||| ||||||||| | || |||||||||||    
T  52928821 ttgaaggataattagttaattatctcatttatgat-ttttagaaatgtagcattccgtttatgtgttgattactctgat 52928898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 21476847 - 21476794
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    |||||||||||| |||||||||||||||| |||| ||||  || ||||||||||    
T  21476847 tactctgattatttttatgaaatttttatgttgggaaaacggggtgttacaatt 21476794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 677 - 737
Target Start/End: Complemental strand, 28756539 - 28756478
Alignment:
Q  677 tttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttctt 737  Q
    |||| ||||| |||||||| |||| ||||||| ||||||| |||||| ||||||||||||||    
T  28756539 ttttagcactccttgtgctgaaatcttcaggcattcagtaatatatttcattttagcttctt 28756478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 35087503 - 35087450
Alignment:
Q  127 aattactctgattatctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
    ||||||||||||||| | |||||||||||||| |||| ||||  ||||||||||    
T  35087503 aattactctgattatttatatgaaatttttatgttgggaaaacgggatgttaca 35087450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 62653 - 62581
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat 113  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||    
T  62653 atatttatgttgattgaactttgaaggaaaattagttaattaatccatttatgatctttaagaagtgtagcat 62581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 87058 - 86981
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||||||||  | ||||||||| |||||||||||||||| || |||||| ||| |||||||||||| |||||||||    
T  87058 ttatgttgattatattttgaaggataattagttaattattcaatttatgatttttaagaagtgtagcattccgtttat 86981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 5524 - 5647
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatct 143  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||| ||||||||| |   ||  ||||||||||| |    
T  5524 ttatgttgattgaactttgaaggaaaattagttaattattccatttatgatttttaagaagtgtggcattccgtttatgtggaaa--actctgattattt 5621  T
Q  144 -ttatgaaatttttatcttggaaaaa 168  Q
     ||||||||||||||| |||||||||    
T  5622 gttatgaaatttttatgttggaaaaa 5647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 6e-24; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 30139559 - 30139685
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||  || ||||||  ||| | |||||||||||||    
T  30139559 atatttatgttgattgaactttgaaggaaaattagttaattattccatttatgatttttaagaagtgtgacattccgtt--tatgtgaattactctgatt 30139656  T
Q  140 atctttatgaaatttttatcttggaaaaa 168  Q
    || |  | ||||||||||| |||| ||||    
T  30139657 atttaaacgaaatttttatgttgggaaaa 30139685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 40 - 180
Target Start/End: Original strand, 22179006 - 22179147
Alignment:
Q  40 gatatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgat 138  Q
    ||||||||||||||||||| | ||||||| || | |||| ||||||||| |||||| ||| |||||||||||| ||||||||| | || | |||||||||    
T  22179006 gatatttatgttgattgaattatgaaggataaattgttatttattccatttatgatttttaagaagtgtagcattccgtttatgtgttgaatactctgat 22179105  T
Q  139 tatctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
      |  ||||||||||||||| |||| ||||  ||||||||||    
T  22179106 agttgttatgaaatttttatattgggaaaacgggatgttaca 22179147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 20298669 - 20298533
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatct 143  Q
    |||| |||||| || ||||||||| ||||||||||||||||||| ||||||  ||  ||| ||||||| ||||||  ||| | ||||||||||||||| |    
T  20298669 ttatattgattaaattttgaaggataattagttaattattccatttatgattgttatgaaatgtagcattccgtt--tatgtgaattactctgattattt 20298572  T
Q  144 ttatgaaatttttatcttggaaaaataggatgttacaat 182  Q
    |||| |||||||||| |||| ||||  || |||||||||    
T  20298571 ttattaaatttttatgttgggaaaacggggtgttacaat 20298533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 31453992 - 31453945
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccat 88  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  31453992 atatttatgttgattgaactttgaagaaaaattagttaattattccat 31453945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 17005068 - 17005026
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattat 83  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17005068 atatttatgttgattgaactttgaaggaaaattagttaattat 17005026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 664 - 737
Target Start/End: Complemental strand, 26369009 - 26368935
Alignment:
Q  664 tttttagctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttctt 737  Q
    |||| ||||||| |||| |||||||||||||| |||| ||||||| ||||||| |||||||||||||||||||||    
T  26369009 ttttcagctgggtttttagcacttcttgtgctgaaatattcaggcgttcagtaatatattccattttagcttctt 26368935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 24211850 - 24211791
Alignment:
Q  63 gaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||| ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||    
T  24211850 gaaggataattagttaattattccatttatgatttttgagaagtgtagcattccgtttat 24211791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 21742859 - 21742939
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattat 141  Q
    |||||||| ||||||||||||||  ||| |||||| |||||||| ||||||| |||||||||||  | ||||||||||||||    
T  21742859 ttgaaggataattagttaattatctcatttatgat-ttttagaattgtagcattccgtttatatgctgattactctgattat 21742939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 26833448 - 26833395
Alignment:
Q  60 tttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat 113  Q
    ||||||| ||||||||||||||||||||| |||||| ||| |||||||| ||||    
T  26833448 tttgaagaaaaattagttaattattccatttatgatttttaagaagtgtcgcat 26833395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 26012870 - 26012989
Alignment:
Q  63 gaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgattatctttatgaaatttttatctt 161  Q
    |||||| ||||||||||||||  ||| |||||| ||| ||||||||||||| |||||||| | || ||||||||||| |   ||||||||||||||  ||    
T  26012870 gaaggataattagttaattatctcatttatgat-tttaagaagtgtagcattccgtttatgtgttgattactctgataaatgttatgaaatttttaagtt 26012968  T
Q  162 ggaaaaataggatgttacaat 182  Q
    || ||||  || |||||||||    
T  26012969 gggaaaacggggtgttacaat 26012989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 677 - 737
Target Start/End: Complemental strand, 40973333 - 40973273
Alignment:
Q  677 tttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttctt 737  Q
    |||||| ||||||| |||| || ||| |||||||||||| |||||||||||||| ||||||    
T  40973333 tttttgtacttcttatgctgaactttccaggcttcagtaatatattccattttaacttctt 40973273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 181
Target Start/End: Original strand, 10776549 - 10776660
Alignment:
Q  70 aattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgattatctttatgaaatttttatcttggaaaaat 169  Q
    ||||||||||||||  ||| |||||| ||| ||||||||||||| |  |||| |||| | ||||||||| ||  || |||||||||||| |||| ||||     
T  10776549 aattagttaattatctcatttatgatttttaagaagtgtagcattccgttatttattgaatactctgataattgttgtgaaatttttatgttgggaaaac 10776648  T
Q  170 aggatgttacaa 181  Q
     || ||||||||    
T  10776649 ggggtgttacaa 10776660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 14047364 - 14047266
Alignment:
Q  70 aattagttaattattccatgtatgatcttttagaagtgtagcatccgtttatatattaattactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||||||  ||| |||||| ||| ||||||||||||| |  |||| | || | ||||||||| ||  ||||||||||||||| |||| ||||    
T  14047364 aattagttaattatctcatttatgatttttaagaagtgtagcattccgttatttgttgaatactctgataattgttatgaaatttttatgttgggaaaa 14047266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 20807697 - 20807747
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
    |||||||||||| |||||||||||||||| |||| |||| ||| |||||||    
T  20807697 tactctgattatttttatgaaatttttatgttgggaaaacagggtgttaca 20807747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 21330362 - 21330440
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgat 138  Q
    |||||||| ||||||||||||||  ||| |||||| ||| |||||||||||| || |||||| | || |||||||||||    
T  21330362 ttgaaggataattagttaattatctcatttatgatttttaagaagtgtagcattctgtttatgtgttgattactctgat 21330440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 22142056 - 22141951
Alignment:
Q  63 gaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgattatctttatgaaatttttatctt 161  Q
    |||||| ||||||||||||||  ||| |||| | ||| ||||||||||||| |||||||| | || ||||||||||| |   ||||||||||||||| ||    
T  22142056 gaaggataattagttaattatctcatttatgtt-tttaagaagtgtagcattccgtttatgtgttgattactctgataaatgttatgaaatttttatgtt 22141958  T
Q  162 ggaaaaa 168  Q
    || ||||    
T  22141957 gggaaaa 22141951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 669 - 738
Target Start/End: Complemental strand, 22580459 - 22580389
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggctt-cagtattatattccattttagcttcttc 738  Q
    ||||||||||||  |||||||||| || |||| || |||||| ||||| |||||||||||||| |||||||    
T  22580459 agctggggttttgacacttcttgtactgaaatctttaggctttcagtaatatattccattttaacttcttc 22580389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 26733585 - 26733634
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  26733585 ttatgttg-ttgaaatttgaaggataattagttaattattccatttatgat 26733634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 27768826 - 27768875
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  27768826 ttatgttg-ttgaattttgaaggataattagttaattattccatttatgat 27768875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 29916421 - 29916498
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgat 138  Q
    |||||||| ||||||||||||||  ||| |||||| |||||||||||||||| ||||||| |||  | |||||||||||    
T  29916421 ttgaaggataattagttaattatctcatttatgat-ttttagaagtgtagcattccgtttctatgctgattactctgat 29916498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 31143439 - 31143389
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttaca 180  Q
    |||||||||||| |||||||||||||||| |||| |||| ||| |||||||    
T  31143439 tactctgattatttttatgaaatttttatgttgggaaaacagggtgttaca 31143389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 3006 - 3073
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgt 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||| ||||||||    
T  3006 atatttatgttgattgaactttgaaggaaaattagctaattattccatttatgatttttaagaagtgt 3073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 8340 - 8214
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||| ||| ||||||||  || ||||||  ||| |  ||||||||||||    
T  8340 atatttatgttgattaaactttgaagaaaaattagttaattattccatttatgatttttaagaagtgtgacattccgtt--tatgtggattactctgatt 8243  T
Q  140 atctttatgaaatttttatcttggaaaaa 168  Q
    || |  ||||||||||||| |||| ||||    
T  8242 atttaaatgaaatttttatgttgggaaaa 8214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 13360 - 13288
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat 113  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | |||||| |||  ||||||||||||    
T  13360 atatttatgttgatcgaactttgaaggaaaattagttaattattccctttatgatttttatgaagtgtagcat 13288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 669 - 737
Target Start/End: Complemental strand, 40345839 - 40345771
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttctt 737  Q
    |||||||||||||||||||||| | ||||||||| ||| |||||||||||||||| |||||||||||||    
T  40345839 agctggggtttttgcacttcttatactaaaatttccagacttcagtattatattctattttagcttctt 40345771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 179
Target Start/End: Complemental strand, 46641853 - 46641735
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgattatctttatgaaatttttatc 159  Q
    |||||||| ||||||||||||||  ||| |||||| ||||||||||||||||| |||||||||| || ||||||||||| || | | |||||||||||      
T  46641853 ttgaaggataattagttaattatctcatttatgat-ttttagaagtgtagcattccgtttatatgttgattactctgataatatgtttgaaatttttaag 46641755  T
Q  160 ttggaaaaataggatgttac 179  Q
    |||| ||||| || ||||||    
T  46641754 ttgggaaaatggggtgttac 46641735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 669 - 738
Target Start/End: Complemental strand, 10419021 - 10418951
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    ||||||| |||| |||||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||    
T  10419021 agctgggtttttagcacttcttgtgctgaaatattcaggcgttcagtaatatattccattttagcttcttc 10418951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 10697168 - 10697245
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||||||||  | ||||||||| ||||||||||||||||||| ||| || ||| |||||||||||| |||||||||    
T  10697168 ttatgttgattatattttgaaggataattagttaattattccatttataatttttaagaagtgtagcattccgtttat 10697245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 10910937 - 10911014
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||||||||  | ||||||||| ||||||||||||||||||| ||| || ||| |||||||||||| |||||||||    
T  10910937 ttatgttgattatattttgaaggataattagttaattattccatttataatttttaagaagtgtagcattccgtttat 10911014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 672 - 737
Target Start/End: Complemental strand, 30598296 - 30598231
Alignment:
Q  672 tggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttctt 737  Q
    |||| ||||||||||||||||||| ||||||  | ||||||||| ||||||| |||||||||||||    
T  30598296 tgggatttttgcacttcttgtgctgaaatttctaagcttcagtaatatattcaattttagcttctt 30598231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 39707131 - 39707238
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaatttttatc 159  Q
    |||||||| |||||||||||||| |||| |||||| |||||||||||||||| || |||||| | || |||||||| || |   || ||||||||||||     
T  39707131 ttgaaggataattagttaattatcccatttatgat-ttttagaagtgtagcattctgtttatgtgttgattactctaataaatgttttgaaatttttatg 39707229  T
Q  160 ttggaaaaa 168  Q
    |||||||||    
T  39707230 ttggaaaaa 39707238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 43199398 - 43199517
Alignment:
Q  63 gaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgattatc-tttatgaaatttttatct 160  Q
    |||||| ||||||||||||||  ||| |||||| ||| ||||||||||||| || ||||| |||| ||||||||||| ||  |||||||||||||||  |    
T  43199398 gaaggataattagttaattatctcatttatgat-tttaagaagtgtagcattccatttatgtattgattactctgataattgtttatgaaatttttacgt 43199496  T
Q  161 tggaaaaataggatgttacaa 181  Q
    || |||||| || ||||||||    
T  43199497 tgaaaaaatggggtgttacaa 43199517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 17995153 - 17995212
Alignment:
Q  63 gaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||| ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||    
T  17995153 gaaggataattagttaattattccatttatgatttttaagaagtgtagcattccgtttat 17995212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 40618781 - 40618731
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  40618781 ttatgttgtttgaattttgaaggataattagttaattattccatttatgat 40618731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 672 - 737
Target Start/End: Original strand, 40850848 - 40850914
Alignment:
Q  672 tggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttctt 737  Q
    |||| |||| ||||||||||| || |||| ||||||| ||||||| |||||||||||||||||||||    
T  40850848 tgggtttttagcacttcttgtactgaaatattcaggcgttcagtaatatattccattttagcttctt 40850914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 677 - 738
Target Start/End: Complemental strand, 54947468 - 54947406
Alignment:
Q  677 tttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    |||| |||||||||||||| |||| ||||||| ||||||| ||||||| ||||||||||||||    
T  54947468 ttttagcacttcttgtgctgaaatattcaggcgttcagtaatatattctattttagcttcttc 54947406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 15993828 - 15993935
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgat-tatctttatgaaatttttat 158  Q
    |||||||| ||||||||||||||  ||| |||||| |||||||||||||||| ||||||| ||| || | |||||||||  |||||| ||||||||||||    
T  15993828 ttgaaggataattagttaattatctcatttatgat-ttttagaagtgtagcattccgtttttatgttgaatactctgataaatcttt-tgaaatttttat 15993925  T
Q  159 cttggaaaaa 168  Q
     |||| ||||    
T  15993926 gttgggaaaa 15993935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 19608586 - 19608509
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||||||||  | ||||||||| |||||||||  |||||||| |||||| ||| |||||||||||| |||||||||    
T  19608586 ttatgttgattatattttgaaggataattagttatatattccatttatgatttttaagaagtgtagcattccgtttat 19608509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 3484614 - 3484574
Alignment:
Q  12 ttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  3484614 ttatgatgttgttatatgtgatgaatatgatgtttatgttg 3484574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 8842294 - 8842199
Alignment:
Q  62 tgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaattttta 157  Q
    |||| |||||||||||||||||  ||| ||||| ||||||||||||||||| ||||||||| | || | ||||||||| || | | |||||||||||    
T  8842294 tgaaagaaaattagttaattatctcatttatga-cttttagaagtgtagcattccgtttatgtgttgaatactctgataatatgtttgaaattttta 8842199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 9922406 - 9922334
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat 113  Q
    |||||||||||||||||| | |||| || || | |||| ||||||||| |||||| ||| |||||||||||||    
T  9922406 atatttatgttgattgaattatgaaagataaattgttatttattccatttatgatttttaagaagtgtagcat 9922334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 671 - 738
Target Start/End: Original strand, 48640769 - 48640837
Alignment:
Q  671 ctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    ||||| |||| ||||| |||||||| |||| ||||||| ||||||| ||||||||||||||| ||||||    
T  48640769 ctgggtttttagcactccttgtgctgaaatcttcaggcgttcagtaatatattccattttagtttcttc 48640837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 46641255 - 46641385
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatctttt--agaagtgtagcat-ccgtttatatattaattactctga 137  Q
    ||||||||||||| | || | ||||||| || | |||| ||||||||| || ||| ||||  ||||||||||||| ||||||||||  | | ||||||||    
T  46641255 atatttatgttgaataaattatgaaggataaattgttatttattccatttaagattttttttagaagtgtagcattccgtttatatgatgaatactctga 46641354  T
Q  138 ttatctttatgaaatttttatcttggaaaaa 168  Q
    | ||  ||||||||||||||| |||| ||||    
T  46641355 taattgttatgaaatttttatgttgggaaaa 46641385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 10055650 - 10055568
Alignment:
Q  41 atatttatgttga-ttgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    ||||||||||||| ||||| | ||||||| || | |||| ||||||||| |||||| ||| |||||||||||| |||||||||    
T  10055650 atatttatgttgaattgaattatgaaggataaattgttatttattccatttatgatttttaagaagtgtagcattccgtttat 10055568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 45631555 - 45631517
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaa 168  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  45631555 tactctgattatttttatgaaatttttatgttggaaaaa 45631517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 53632382 - 53632517
Alignment:
Q  53 attgaactttgaaggaaaattagttaattattccatgtatgatcttttagaa-----gtgtagcat-ccgtttatatattaattactctgattatcttta 146  Q
    |||||| ||||| ||| ||||||||||||||||| | |||||| ||| ||||     ||||||||| |||||||| |   ||  ||||||||||| ||||    
T  53632382 attgaaatttgatggataattagttaattattccgtttatgatttttaagaaaagaagtgtagcattccgtttatgtggaaa--actctgattattttta 53632479  T
Q  147 tgaaatttttatcttggaaaaataggatgttacaattt 184  Q
    |||||||||||| |||| ||||  || |||||||||||    
T  53632480 tgaaatttttatgttgggaaaacggggtgttacaattt 53632517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 665 - 702
Target Start/End: Complemental strand, 27644710 - 27644673
Alignment:
Q  665 ttttagctggggtttttgcacttcttgtgctaaaattt 702  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  27644710 ttttagttggggtttttgcacttcttgtgctgaaattt 27644673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 665 - 737
Target Start/End: Original strand, 43499324 - 43499397
Alignment:
Q  665 ttttagctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttctt 737  Q
    |||||||||||||||| ||||| |||||||| |||| | || || ||||||||| || |||||||||| |||||    
T  43499324 ttttagctggggttttggcactccttgtgctgaaatctccaagctttcagtattttaatccattttagtttctt 43499397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 51464779 - 51464827
Alignment:
Q  129 ttactctgattatctttatgaaatttttatcttggaaaaataggatgtta 178  Q
    ||||||||||||| |||||||||||||||| |||| |||| |||||||||    
T  51464779 ttactctgattat-tttatgaaatttttatgttgggaaaacaggatgtta 51464827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 46; Significance: 9e-17; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 41 - 181
Target Start/End: Original strand, 14515 - 14656
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    |||||||||||||||||| | |||| || || | |||| ||||||||| |||||| ||| |||||||||||| ||||||||| | || | |||||||||     
T  14515 atatttatgttgattgaattatgaacgataaattgttatttattccatttatgatttttaagaagtgtagcattccgtttatgtgttgaatactctgata 14614  T
Q  140 atctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    ||  ||||||||||||||| |||| ||||  || ||||||||    
T  14615 attgttatgaaatttttatattgggaaaacggggtgttacaa 14656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 183
Target Start/End: Original strand, 7061 - 7204
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgatt 139  Q
    |||||||||||||||||| |  |||||| || |  ||| ||| ||||| ||||||  || ||||||||||||| |||||||| | || | |||||||||     
T  7061 atatttatgttgattgaattacgaaggataaatttttatttactccatttatgattgttaagaagtgtagcattccgtttatgtgttgaatactctgata 7160  T
Q  140 atctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    ||  ||||||||||||||| |||| |||| ||| | ||||||||    
T  7161 attgttatgaaatttttattttgggaaaacagggttttacaatt 7204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 9416 - 9374
Alignment:
Q  10 tgttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9416 tgttatgatattgttatatgtgatgaatatgatatttatgttg 9374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 3891 - 3933
Alignment:
Q  10 tgttatgatattgttatatgtgatgaatatgatatttatgttg 52  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3891 tgttatgatattgttatatgtgatgaatatgatatttatgttg 3933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 158465 - 158388
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||||||||  | ||||||||| ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||    
T  158465 ttatgttgattatattttgaaggataattagttaattattccatttatgatttttaagaagtgtagcattccgtttat 158388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 1497 - 1457
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattc 85  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1497 ttatgttgattgaactttgaaggaaaattagttaattattc 1457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 79497 - 79453
Alignment:
Q  49 gttgattgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  79497 gttgattgaactttgaaggaaaattagttaattattccatttatg 79453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 82859 - 82815
Alignment:
Q  49 gttgattgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  82859 gttgattgaactttgaaggaaaattagttaattattccatttatg 82815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 207312 - 207360
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  207312 ttatgttgattgaactttgaaggaatattagttaattattccatttatg 207360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 913 - 971
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaa 104  Q
    ||||||||||||||||||||||||||| || ||||||||||||| |||||| ||||||||    
T  913 ttatgttgattgaactttgaaggaaaaataattaattattccatttatgat-ttttagaa 971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 3777 - 3835
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaa 104  Q
    ||||||||||||||||||||||||||| || ||||||||||||| |||||| ||||||||    
T  3777 ttatgttgattgaactttgaaggaaaaataattaattattccatttatgat-ttttagaa 3835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 15766 - 15639
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    ||||||| |||||||||| | ||||||| || | |||| ||||||||| |||||| ||| |||||||||||| ||||||||| ||| ||  ||||| |||    
T  15766 atatttacgttgattgaattatgaaggataaattgttatttattccatttatgatttttaagaagtgtagcattccgtttatgtataaa--actctaatt 15669  T
Q  140 atct-ttatgaaatttttatcttggaaaaa 168  Q
    || | ||||||||||||||| |||| ||||    
T  15668 atttgttatgaaatttttatgttgggaaaa 15639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 17786 - 17659
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgatt 139  Q
    ||||||| |||||||||| | ||||||| || | |||| ||||||||| |||||| ||| |||||||||||| ||||||||| ||| ||  ||||| |||    
T  17786 atatttacgttgattgaattatgaaggataaattgttatttattccatttatgatttttaagaagtgtagcattccgtttatgtataaa--actctaatt 17689  T
Q  140 atct-ttatgaaatttttatcttggaaaaa 168  Q
    || | ||||||||||||||| |||| ||||    
T  17688 atttgttatgaaatttttatgttgggaaaa 17659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 669 - 738
Target Start/End: Complemental strand, 124259 - 124189
Alignment:
Q  669 agctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    ||||||| |||| ||| |||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||    
T  124259 agctgggtttttagcatttcttgtgctgaaatattcaggcgttcagtaatatattccattttagcttcttc 124189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 27627 - 27499
Alignment:
Q  41 atatttatgttgattgaactttgaagga-aaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgat 138  Q
    ||||||||||| |||||| | ||||||| |||||| ||| ||||||||| || ||| ||| |||||||||||| |||||||||||  | | |||||||||    
T  27627 atatttatgttaattgaattatgaaggataaatta-ttatttattccatttaagatttttaagaagtgtagcattccgtttatatgatgaatactctgat 27529  T
Q  139 tatctttatgaaatttttatcttggaaaaa 168  Q
     ||  ||||||||||||||| |||| ||||    
T  27528 aattgttatgaaatttttatgttgggaaaa 27499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 2828 - 2944
Alignment:
Q  53 attgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaa 151  Q
    |||||| ||| || || ||||||||||||||  ||| |||||| ||| |||||||||||| ||||||||  |||| | ||||||||| ||  ||||||||    
T  2828 attgaattttaaaagataattagttaattatctcatttatgatttttaagaagtgtagcattccgtttacgtattgaatactctgataattgttatgaaa 2927  T
Q  152 tttttatcttggaaaaa 168  Q
    ||||||| |||| ||||    
T  2928 tttttatgttgggaaaa 2944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 22494 - 22430
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaatta-ttccatgtatgatcttttagaagtgt 108  Q
    |||||||||||||||||||||| ||||||||||||||| |||| | |||||| ||| ||||||||    
T  22494 ttatgttgattgaactttgaagaaaaattagttaattatttccgtttatgatttttaagaagtgt 22430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 9810 - 9699
Alignment:
Q  70 aattagttaattattccatgtatgatcttttagaagtgtagcatcc-gtttatatattaattactctgatta-tctttatgaaatttttatcttggaaaa 167  Q
    ||||||||||||||  ||| |||||| ||||||||||||||||| | |||||| | || ||||||||||| | | |||||||||||||||  ||||||||    
T  9810 aattagttaattatctcatttatgat-ttttagaagtgtagcattctgtttatgtgttgattactctgataaatgtttatgaaatttttaagttggaaaa 9712  T
Q  168 ataggatgttaca 180  Q
    || || |||||||    
T  9711 atggggtgttaca 9699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1580 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1580
Description:

Target: scaffold1580; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 151 - 206
Alignment:
Q  60 tttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatcc 115  Q
    ||||||||||||||||||||||||||||| | |||  ||| |||||||||||||||    
T  151 tttgaaggaaaattagttaattattccatttctgaattttaagaagtgtagcatcc 206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 2859 - 2800
Alignment:
Q  63 gaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||| ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||    
T  2859 gaaggataattagttaattattccatttatgatttttaagaagtgtagcattccgtttat 2800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 6108 - 5986
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgattatctttatgaaatttttatc 159  Q
    |||||||| ||||||||||||||  ||| ||||| ||||||||||||||||| ||||||||| | || | ||||||||| || | | |||||||||||      
T  6108 ttgaaggataattagttaattatctcatttatga-cttttagaagtgtagcattccgtttatgtgttgaatactctgataatatgtttgaaatttttaag 6010  T
Q  160 ttggaaaaataggatgttacaatt 183  Q
    |||| ||||  || ||||||||||    
T  6009 ttgggaaaacggggtgttacaatt 5986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 496695 - 496640
Alignment:
Q  128 attactctgattatctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    |||||||||||||| | |||||||||||||| |||||||||| || ||||||||||    
T  496695 attactctgattatttatatgaaatttttatgttggaaaaatggggtgttacaatt 496640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 75810 - 75760
Alignment:
Q  131 actctgattatctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    ||||||||||| |||||||||||||||| |||| |||| ||| ||||||||    
T  75810 actctgattatttttatgaaatttttatgttgggaaaacagggtgttacaa 75760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 671 - 737
Target Start/End: Original strand, 9136 - 9202
Alignment:
Q  671 ctggggtttttgcacttcttgtgctaaaattttcaggcttcagtattatattccattttagcttctt 737  Q
    ||||| |||||||||||||| |||| || ||| ||| |||||||| |||||||||||||| ||||||    
T  9136 ctgggatttttgcacttcttatgctgaactttccagacttcagtaatatattccattttaccttctt 9202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 70914 - 70861
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    |||||||||||| |||||||||||||||| |||||||||  || ||||||||||    
T  70914 tactctgattatttttatgaaatttttatattggaaaaacggggtgttacaatt 70861  T

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Target: scaffold0008; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 78757 - 78704
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    |||||||||||| |||||||||||||||| |||||||||  || ||||||||||    
T  78757 tactctgattatttttatgaaatttttatattggaaaaacggggtgttacaatt 78704  T

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Target: scaffold0914 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 978 - 931
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatg 93  Q
    |||||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  978 ttatgttg-ttgaattttgaaggaaaattagttaattattccatttatg 931  T

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Target: scaffold0423 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 9489 - 9541
Alignment:
Q  131 actctgattatctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    ||||||||||| |||||||||||||||| |||| ||||  |||||||||||||    
T  9489 actctgattatttttatgaaatttttatattgggaaaacgggatgttacaatt 9541  T

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Target: scaffold0133 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 43711 - 43639
Alignment:
Q  41 atatttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat 113  Q
    |||||||||||||||||| | |||| || || | |||| ||||||||| |||||| ||| |||||||||||||    
T  43711 atatttatgttgattgaattatgaaagataaattgttatttattccatttatgatttttaagaagtgtagcat 43639  T

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Target: scaffold0046 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 26879 - 26919
Alignment:
Q  44 tttatgttgattgaactttgaaggaaaattagttaattatt 84  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  26879 tttatgttgattgatttttgaaggaaaattagttaattatt 26919  T

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Target: scaffold0046; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 17739 - 17789
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    ||||||| |||||  ||||||||||||||||||||||||||| | ||||||    
T  17739 ttatgtttattgatttttgaaggaaaattagttaattattccgtttatgat 17789  T

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Target: scaffold2007 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 463 - 538
Alignment:
Q  47 atgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttat 121  Q
    |||||||||  | ||||||||| |||||||||||| |||||| |||||| ||| ||||| |||||| |||||||||    
T  463 atgttgattatattttgaaggataattagttaattgttccatttatgatttttaagaagcgtagcattccgtttat 538  T

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Target: scaffold0877 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 177
Target Start/End: Original strand, 77 - 191
Alignment:
Q  63 gaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgattatctttatgaaatttttatctt 161  Q
    |||||| ||||||||||||||  ||| |||| | ||| ||||||||||||| |||||||| | || ||||||||||| |   ||||||||||||||| ||    
T  77 gaaggataattagttaattatatcatttatgtt-tttaagaagtgtagcattccgtttatgtgttgattactctgataaatgttatgaaatttttatgtt 175  T
Q  162 ggaaaaataggatgtt 177  Q
    || |||| ||| ||||    
T  176 gggaaaacagggtgtt 191  T

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Target: scaffold0063 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 42861 - 42912
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    |||||||||||| |||||||||||||||| |||||||||  || ||||||||    
T  42861 tactctgattatttttatgaaatttttatgttggaaaaacggggtgttacaa 42912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 95
Target Start/End: Complemental strand, 66382 - 66347
Alignment:
Q  60 tttgaaggaaaattagttaattattccatgtatgat 95  Q
    ||||||||||||||||||||||||||||| ||||||    
T  66382 tttgaaggaaaattagttaattattccatttatgat 66347  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 156616 - 156565
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaa 181  Q
    |||||||||||| |||||||||||||||| |||| ||||| || ||||||||    
T  156616 tactctgattatttttatgaaatttttatgttgggaaaatggggtgttacaa 156565  T

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Target: scaffold0956 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 3749 - 3700
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  3749 ttatgttg-ttgaattttgaaggataattagttaattattccatttatgat 3700  T

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Target: scaffold0507 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 8927 - 9032
Alignment:
Q  63 gaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgattatctttatgaaatttttatctt 161  Q
    |||||| ||||||||||||||  |||  ||||||||  ||||||||||||| |||||||| | || ||||||||||| |   ||||||||||||||| ||    
T  8927 gaaggataattagttaattatctcattaatgatctta-agaagtgtagcattccgtttatgtgttgattactctgataaatgttatgaaatttttatgtt 9025  T
Q  162 ggaaaaa 168  Q
    || ||||    
T  9026 gggaaaa 9032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 31; Significance: 0.00000008; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 1450 - 1401
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  1450 ttatgttg-ttgaattttgaaggataattagttaattattccatttatgat 1401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 6956 - 6907
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  6956 ttatgttg-ttgaattttgaaggataattagttaattattccatttatgat 6907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 1815 - 1849
Alignment:
Q  54 ttgaactttgaaggaaaattagttaattattccat 88  Q
    ||||| |||||||||||||||||||||||||||||    
T  1815 ttgaattttgaaggaaaattagttaattattccat 1849  T

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Target: scaffold0300 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 665 - 738
Target Start/End: Original strand, 9604 - 9678
Alignment:
Q  665 ttttagctggggtttttgcacttcttgtgctaaaattttcaggc-ttcagtattatattccattttagcttcttc 738  Q
    ||||||||||| ||||  ||||||||||||| |||| ||||||| || |||||| || |||||||||| ||||||    
T  9604 ttttagctgggattttgacacttcttgtgctgaaatcttcaggcttttagtattttaatccattttagtttcttc 9678  T

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Target: scaffold0158 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 26745 - 26787
Alignment:
Q  53 attgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||    
T  26745 attgaattttgaaggataattagttaattattccatttatgat 26787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 19084 - 19035
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  19084 ttatgttg-ttgaattttgaaggataattagttaattattccatttatgat 19035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 71703 - 71752
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgat 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  71703 ttatgttg-ttgaattttgaaggataattagttaattattccatttatgat 71752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 52995 - 53072
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagca-tccgtttatatattaattactctgat 138  Q
    |||||||| |||||||||| ||| |||| |||||| |||||||||||||||| ||||||| |||  | |||||||||||    
T  52995 ttgaaggataattagttaactatcccatttatgat-ttttagaagtgtagcattccgtttctatgctgattactctgat 53072  T

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Target: scaffold2112 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold2112
Description:

Target: scaffold2112; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 879 - 826
Alignment:
Q  130 tactctgattatctttatgaaatttttatcttggaaaaataggatgttacaatt 183  Q
    |||||||||||| |||||||||||||||| |||| ||||  || ||||||||||    
T  879 tactctgattatttttatgaaatttttatgttgggaaaacggggtgttacaatt 826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 10187 - 10069
Alignment:
Q  61 ttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcat-ccgtttatatattaattactctgattatctttatgaaatttttatc 159  Q
    |||||||| ||||||||||||||   || |||||| |||  |||||||||||| ||||||||||  | | |||||||||||| | | |||||||||||      
T  10187 ttgaaggataattagttaattatcttatttatgattttt--gaagtgtagcattccgtttatatgatgaatactctgattatatgtttgaaatttttaag 10090  T
Q  160 ttggaaaaataggatgttaca 180  Q
    |||| |||| ||| |||||||    
T  10089 ttgggaaaacagggtgttaca 10069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 7933 - 8002
Alignment:
Q  45 ttatgttgattgaactttgaaggaaaattagttaattattccatgtatgatcttttagaagtgtagcatc 114  Q
    ||||||||||| || ||||||||| ||||| ||||||||| ||| ||||||  || | ||||||||||||    
T  7933 ttatgttgattaaattttgaaggataattaattaattatttcatttatgattcttaaaaagtgtagcatc 8002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 22091 - 22128
Alignment:
Q  131 actctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  22091 actctgattatttttatgaaatttttatgttggaaaaa 22128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 37772 - 37809
Alignment:
Q  131 actctgattatctttatgaaatttttatcttggaaaaa 168  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  37772 actctgattatttttatgaaatttttatcttgggaaaa 37809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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