View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2609-Insertion-6 (Length: 257)
Name: NF2609-Insertion-6
Description: NF2609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2609-Insertion-6 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 8 - 257
Target Start/End: Complemental strand, 34140114 - 34139865
Alignment:
| Q |
8 |
attataccagtcatagcaattacatcaacataaaacaaagtagccaatgcctcccaaacttcccttttattaaaatcaccaaagctaaaaacccatgcag |
107 |
Q |
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| T |
34140114 |
attataccagtcatagcaattacatcgacataaaacaaagtagccaatgcctcccaaacttcccttttattaaaatcaccaaagctaaaaacccatgcag |
34140015 |
T |
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| Q |
108 |
ttgattcaatcttatgaaaatcaacaatttgcttgaaataactaaaattcccatcaccaagtggtgtatcaggaaaataagtaacttcagtgtgtctaaa |
207 |
Q |
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| T |
34140014 |
ttgattcaatcttatgaaaatcaacaatttgcttgaaataactaaaattcccatcaccaagtggtgtatcaggaaaataagtaacttcagtgtgtctaaa |
34139915 |
T |
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| Q |
208 |
ccaagacacaaatgtcacaaaaagaataccataaatcatactacctttaa |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34139914 |
ccaagacacaaatgtcacaaaaagaataccataaatcatactacctttaa |
34139865 |
T |
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