View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2609-Insertion-7 (Length: 128)
Name: NF2609-Insertion-7
Description: NF2609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2609-Insertion-7 |
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Alignment Details
Target: chr2 (Bit Score: 71; Significance: 1e-32; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 3342898 - 3342968
Alignment:
| Q |
44 |
agtaagtatcttatcttgtataatgtttacaattaaatctacgtagaaacatatttccacatttatcttat |
114 |
Q |
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| T |
3342898 |
agtaagtatcttatcttgtataatgtttacaattaaatctacgtagaaacatatttccacatttatcttat |
3342968 |
T |
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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 3342820 - 3342855
Alignment:
| Q |
5 |
acataaacaaagaaagagaattgaagagaggacaaa |
40 |
Q |
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| T |
3342820 |
acataaacaaagaaagagaattgaagagaggacaaa |
3342855 |
T |
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