View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2609R-Insertion-13 (Length: 525)

Name: NF2609R-Insertion-13
Description: NF2609R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2609R-Insertion-13
NF2609R-Insertion-13
[»] chr7 (45 HSPs)
chr7 (210-525)||(30310119-30310434)
chr7 (210-322)||(47456381-47456493)
chr7 (211-357)||(40508377-40508523)
chr7 (210-357)||(43459453-43459599)
chr7 (210-323)||(6173455-6173568)
chr7 (210-409)||(40509653-40509852)
chr7 (210-322)||(4300054-4300166)
chr7 (210-357)||(47454335-47454481)
chr7 (210-369)||(32256355-32256513)
chr7 (211-381)||(45455320-45455489)
chr7 (210-409)||(22115083-22115283)
chr7 (213-323)||(43460828-43460938)
chr7 (210-323)||(33096867-33096980)
chr7 (210-322)||(4298711-4298823)
chr7 (210-322)||(32602931-32603043)
chr7 (234-341)||(30333307-30333414)
chr7 (226-349)||(32255003-32255125)
chr7 (211-408)||(47060395-47060592)
chr7 (210-323)||(30311474-30311587)
chr7 (210-323)||(45454036-45454149)
chr7 (208-357)||(47059104-47059254)
chr7 (236-385)||(11344531-11344677)
chr7 (200-357)||(22538820-22538976)
chr7 (210-357)||(33779058-33779202)
chr7 (233-357)||(11501201-11501324)
chr7 (313-424)||(9662142-9662251)
chr7 (235-373)||(24282931-24283068)
chr7 (210-356)||(30334613-30334755)
chr7 (213-322)||(46835676-46835785)
chr7 (241-357)||(22337343-22337457)
chr7 (210-266)||(40811338-40811394)
chr7 (197-357)||(41079807-41079965)
chr7 (238-324)||(13564243-13564329)
chr7 (234-422)||(3413554-3413742)
chr7 (238-349)||(22336005-22336115)
chr7 (234-323)||(3414839-3414928)
chr7 (234-325)||(24281096-24281188)
chr7 (226-276)||(25533202-25533252)
chr7 (238-324)||(40812617-40812703)
chr7 (287-351)||(24844336-24844399)
chr7 (210-322)||(35664287-35664399)
chr7 (233-276)||(11502474-11502517)
chr7 (238-276)||(24844402-24844440)
chr7 (232-277)||(38539691-38539736)
chr7 (232-277)||(46202334-46202379)
[»] scaffold0056 (1 HSPs)
scaffold0056 (8-208)||(69336-69536)
[»] chr3 (47 HSPs)
chr3 (199-424)||(53624267-53624490)
chr3 (210-390)||(53194808-53194988)
chr3 (210-388)||(40364317-40364495)
chr3 (210-357)||(38240904-38241050)
chr3 (204-319)||(40244179-40244294)
chr3 (210-348)||(53187557-53187693)
chr3 (210-323)||(18197145-18197258)
chr3 (215-388)||(18442255-18442424)
chr3 (215-388)||(19487329-19487498)
chr3 (210-323)||(38242521-38242634)
chr3 (210-354)||(50810808-50810952)
chr3 (210-354)||(50864912-50865056)
chr3 (210-319)||(12107992-12108101)
chr3 (213-322)||(18458663-18458772)
chr3 (213-322)||(23443463-23443572)
chr3 (210-322)||(37735304-37735416)
chr3 (211-318)||(34819295-34819401)
chr3 (210-320)||(37736089-37736199)
chr3 (226-322)||(50809435-50809531)
chr3 (226-322)||(50866331-50866427)
chr3 (210-324)||(34818084-34818198)
chr3 (234-357)||(42684898-42685021)
chr3 (233-323)||(41544683-41544773)
chr3 (210-322)||(36176512-36176625)
chr3 (246-388)||(20288164-20288306)
chr3 (238-416)||(24403265-24403443)
chr3 (210-349)||(3208482-3208620)
chr3 (210-277)||(3209982-3210049)
chr3 (266-385)||(36175317-36175435)
chr3 (210-357)||(53420317-53420462)
chr3 (238-357)||(27837946-27838063)
chr3 (210-325)||(53421764-53421879)
chr3 (211-276)||(55328357-55328422)
chr3 (304-388)||(20336597-20336681)
chr3 (313-388)||(20314704-20314779)
chr3 (247-357)||(10730920-10731029)
chr3 (341-413)||(21074195-21074267)
chr3 (238-276)||(35370939-35370977)
chr3 (232-322)||(42686151-42686241)
chr3 (210-275)||(12105288-12105353)
chr3 (238-323)||(35372163-35372248)
chr3 (210-262)||(8795938-8795990)
chr3 (238-321)||(26887562-26887645)
chr3 (238-323)||(53614278-53614363)
chr3 (267-323)||(12106629-12106685)
chr3 (348-388)||(20286685-20286725)
chr3 (348-388)||(20335384-20335424)
[»] chr1 (34 HSPs)
chr1 (344-492)||(7161159-7161307)
chr1 (210-357)||(15072761-15072908)
chr1 (210-424)||(14470854-14471068)
chr1 (210-413)||(14477706-14477909)
chr1 (210-334)||(46111483-46111606)
chr1 (212-357)||(35943418-35943563)
chr1 (210-372)||(52628830-52628991)
chr1 (210-323)||(50444703-50444816)
chr1 (210-349)||(45584989-45585127)
chr1 (234-357)||(16123309-16123432)
chr1 (199-322)||(41872563-41872686)
chr1 (205-324)||(27814285-27814404)
chr1 (210-316)||(34351968-34352074)
chr1 (210-323)||(15071340-15071453)
chr1 (210-321)||(52627513-52627625)
chr1 (238-323)||(44278354-44278439)
chr1 (226-355)||(51042316-51042444)
chr1 (200-391)||(23091339-23091531)
chr1 (234-373)||(24499611-24499749)
chr1 (238-357)||(49802867-49802985)
chr1 (210-276)||(33369247-33369313)
chr1 (226-355)||(16963848-16963976)
chr1 (233-369)||(46467167-46467303)
chr1 (238-333)||(15234037-15234131)
chr1 (210-424)||(41873875-41874089)
chr1 (216-334)||(50442628-50442746)
chr1 (337-401)||(19466135-19466199)
chr1 (238-385)||(44276148-44276294)
chr1 (337-422)||(36509933-36510017)
chr1 (291-357)||(44999433-44999499)
chr1 (238-322)||(15232778-15232862)
chr1 (344-388)||(30535609-30535653)
chr1 (233-277)||(42244652-42244696)
chr1 (248-321)||(16965134-16965207)
[»] chr6 (26 HSPs)
chr6 (210-335)||(6452504-6452629)
chr6 (210-354)||(232174-232316)
chr6 (210-323)||(6452282-6452395)
chr6 (213-322)||(27080925-27081034)
chr6 (210-319)||(34024073-34024181)
chr6 (211-357)||(7310275-7310420)
chr6 (210-323)||(7311730-7311842)
chr6 (210-308)||(34023884-34023982)
chr6 (238-357)||(23397326-23397444)
chr6 (238-357)||(32506997-32507116)
chr6 (212-322)||(27967055-27967165)
chr6 (197-321)||(15730036-15730161)
chr6 (238-325)||(2687256-2687343)
chr6 (233-304)||(233588-233659)
chr6 (238-357)||(5186594-5186712)
chr6 (234-357)||(12669745-12669868)
chr6 (238-349)||(23392240-23392350)
chr6 (238-357)||(29380217-29380335)
chr6 (248-323)||(29381735-29381810)
chr6 (238-324)||(17839143-17839229)
chr6 (238-322)||(6701406-6701490)
chr6 (247-323)||(17837651-17837727)
chr6 (212-302)||(27082170-27082261)
chr6 (238-373)||(29722689-29722823)
chr6 (238-328)||(2687924-2688014)
chr6 (337-388)||(15728855-15728906)
[»] chr4 (57 HSPs)
chr4 (201-388)||(42871084-42871270)
chr4 (210-357)||(390215-390361)
chr4 (210-324)||(1188841-1188955)
chr4 (210-349)||(2312462-2312600)
chr4 (212-323)||(42810208-42810319)
chr4 (235-424)||(27847701-27847888)
chr4 (210-325)||(1831266-1831381)
chr4 (210-321)||(24426337-24426448)
chr4 (210-324)||(4128991-4129105)
chr4 (210-334)||(393632-393756)
chr4 (201-324)||(1587171-1587294)
chr4 (211-334)||(1829752-1829874)
chr4 (210-357)||(6348153-6348299)
chr4 (214-349)||(6349533-6349667)
chr4 (205-399)||(44503608-44503801)
chr4 (210-424)||(37884182-37884395)
chr4 (210-323)||(2310921-2311034)
chr4 (210-322)||(37882832-37882944)
chr4 (213-308)||(27850952-27851047)
chr4 (238-382)||(10168728-10168873)
chr4 (210-322)||(44501516-44501628)
chr4 (210-324)||(1190196-1190310)
chr4 (208-350)||(4871342-4871484)
chr4 (210-323)||(1794409-1794522)
chr4 (210-349)||(1588069-1588207)
chr4 (210-321)||(52239875-52239986)
chr4 (210-324)||(40792749-40792863)
chr4 (210-322)||(49344015-49344128)
chr4 (210-322)||(15450081-15450193)
chr4 (213-357)||(52963570-52963713)
chr4 (212-323)||(31965835-31965946)
chr4 (210-321)||(49342617-49342728)
chr4 (238-357)||(52241127-52241245)
chr4 (210-424)||(53205387-53205601)
chr4 (210-323)||(31968397-31968510)
chr4 (232-357)||(53432082-53432207)
chr4 (198-366)||(11438530-11438698)
chr4 (234-322)||(54485551-54485639)
chr4 (238-325)||(10167451-10167538)
chr4 (313-424)||(13533166-13533275)
chr4 (213-319)||(42872308-42872414)
chr4 (233-373)||(14524806-14524946)
chr4 (232-325)||(53204381-53204474)
chr4 (210-321)||(11968509-11968620)
chr4 (238-356)||(50546932-50547051)
chr4 (337-422)||(34438528-34438612)
chr4 (287-355)||(13166742-13166810)
chr4 (270-413)||(5591363-5591508)
chr4 (270-413)||(48126862-48127007)
chr4 (238-323)||(7707614-7707699)
chr4 (232-424)||(53435657-53435849)
chr4 (238-324)||(23201872-23201958)
chr4 (241-323)||(50548228-50548310)
chr4 (238-390)||(13165522-13165673)
chr4 (213-257)||(55764406-55764450)
chr4 (248-322)||(33232703-33232777)
chr4 (213-257)||(55828850-55828894)
[»] chr2 (32 HSPs)
chr2 (210-357)||(43033080-43033226)
chr2 (210-424)||(28562714-28562927)
chr2 (210-349)||(17459251-17459389)
chr2 (210-357)||(11315931-11316077)
chr2 (210-357)||(32470547-32470693)
chr2 (210-357)||(17460656-17460802)
chr2 (210-323)||(7437766-7437879)
chr2 (210-323)||(11317373-11317486)
chr2 (213-322)||(43034477-43034586)
chr2 (214-424)||(7436469-7436677)
chr2 (210-323)||(32469146-32469260)
chr2 (212-364)||(28561368-28561521)
chr2 (211-322)||(36011648-36011758)
chr2 (210-322)||(6030476-6030588)
chr2 (210-349)||(11547657-11547795)
chr2 (213-316)||(36010578-36010681)
chr2 (213-323)||(42641866-42641975)
chr2 (238-349)||(29219411-29219521)
chr2 (238-349)||(29332710-29332820)
chr2 (226-424)||(2277373-2277571)
chr2 (199-325)||(6030592-6030718)
chr2 (238-349)||(18616986-18617096)
chr2 (197-263)||(6028730-6028796)
chr2 (239-367)||(6032275-6032403)
chr2 (238-322)||(34468984-34469068)
chr2 (238-321)||(44192453-44192536)
chr2 (238-332)||(44191162-44191256)
chr2 (313-401)||(34147237-34147325)
chr2 (198-357)||(12359650-12359809)
chr2 (313-361)||(34464069-34464117)
chr2 (205-334)||(29220871-29220999)
chr2 (205-334)||(29334170-29334298)
[»] chr5 (26 HSPs)
chr5 (210-323)||(22047730-22047843)
chr5 (210-357)||(325157-325303)
chr5 (212-349)||(39603853-39603989)
chr5 (210-373)||(22049092-22049254)
chr5 (210-349)||(30859152-30859290)
chr5 (210-319)||(15941272-15941380)
chr5 (213-323)||(39605474-39605584)
chr5 (238-424)||(33173863-33174050)
chr5 (234-357)||(22308770-22308893)
chr5 (212-321)||(27705323-27705432)
chr5 (210-322)||(30857798-30857910)
chr5 (212-349)||(15548240-15548373)
chr5 (211-271)||(41798004-41798064)
chr5 (238-357)||(30912134-30912252)
chr5 (226-401)||(32757839-32758014)
chr5 (238-349)||(30910767-30910877)
chr5 (210-324)||(34894147-34894261)
chr5 (210-316)||(34898963-34899069)
chr5 (212-277)||(11262256-11262321)
chr5 (226-277)||(8521269-8521320)
chr5 (234-325)||(22307530-22307621)
chr5 (337-388)||(42510236-42510287)
chr5 (232-277)||(9169606-9169651)
chr5 (219-324)||(24503191-24503296)
chr5 (321-357)||(1102727-1102763)
chr5 (224-324)||(24509040-24509140)
[»] scaffold0031 (2 HSPs)
scaffold0031 (210-357)||(123967-124113)
scaffold0031 (211-349)||(125213-125350)
[»] chr8 (45 HSPs)
chr8 (210-347)||(42870811-42870947)
chr8 (210-357)||(42872161-42872307)
chr8 (210-323)||(32798537-32798650)
chr8 (199-319)||(32797125-32797245)
chr8 (210-349)||(44076343-44076481)
chr8 (210-323)||(26696530-26696643)
chr8 (210-357)||(6397781-6397927)
chr8 (210-323)||(30787605-30787718)
chr8 (210-357)||(8571587-8571735)
chr8 (210-354)||(28420148-28420292)
chr8 (248-388)||(26697773-26697912)
chr8 (210-322)||(28418804-28418916)
chr8 (213-357)||(41629709-41629852)
chr8 (210-325)||(8570116-8570231)
chr8 (210-349)||(32695255-32695393)
chr8 (235-357)||(22551030-22551151)
chr8 (210-334)||(30786674-30786797)
chr8 (252-323)||(29103527-29103598)
chr8 (238-413)||(45437397-45437572)
chr8 (210-308)||(13197961-13198059)
chr8 (205-301)||(41630151-41630247)
chr8 (210-349)||(4810467-4810605)
chr8 (210-324)||(32693828-32693942)
chr8 (232-325)||(211615-211708)
chr8 (232-325)||(240548-240641)
chr8 (232-325)||(725238-725331)
chr8 (232-325)||(793903-793996)
chr8 (238-354)||(13116356-13116471)
chr8 (208-276)||(45281240-45281308)
chr8 (243-322)||(29104371-29104450)
chr8 (210-357)||(45279678-45279824)
chr8 (210-356)||(212684-212830)
chr8 (210-356)||(239424-239570)
chr8 (210-356)||(726307-726453)
chr8 (210-356)||(792779-792925)
chr8 (210-356)||(798808-798954)
chr8 (238-348)||(17339530-17339639)
chr8 (210-259)||(12850464-12850513)
chr8 (248-348)||(6398478-6398577)
chr8 (238-322)||(17338067-17338151)
chr8 (238-357)||(42100078-42100196)
chr8 (238-324)||(13117637-13117723)
chr8 (232-277)||(45394987-45395032)
chr8 (226-277)||(42877633-42877684)
chr8 (238-276)||(42098589-42098627)
[»] scaffold0034 (2 HSPs)
scaffold0034 (202-422)||(109652-109871)
scaffold0034 (238-348)||(108539-108648)
[»] scaffold0077 (2 HSPs)
scaffold0077 (210-349)||(54165-54303)
scaffold0077 (216-324)||(52596-52704)
[»] scaffold0118 (1 HSPs)
scaffold0118 (226-346)||(43558-43677)
[»] scaffold0078 (1 HSPs)
scaffold0078 (213-324)||(18813-18924)
[»] scaffold0019 (2 HSPs)
scaffold0019 (235-355)||(63104-63224)
scaffold0019 (234-322)||(61873-61961)
[»] scaffold0201 (1 HSPs)
scaffold0201 (210-424)||(21125-21339)
[»] scaffold0011 (1 HSPs)
scaffold0011 (238-357)||(127459-127578)
[»] scaffold1251 (1 HSPs)
scaffold1251 (226-388)||(1025-1187)
[»] scaffold1152 (1 HSPs)
scaffold1152 (210-348)||(2457-2593)


Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 210 - 525
Target Start/End: Original strand, 30310119 - 30310434
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  30310119 ggcttatttgatccaatagtcccttaaataatttcaagttttcatttttgtcccacaattaataaaacgtacatttgagttcctcattttttcctccgtt 30310218  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaatttt 409  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30310219 tgccaaataaatcccagactgttaaagttaaccccaaatgtctatggtggactaacattatagagagtccaccatagactttgataatttttaaaatttt 30310318  T
Q  410 aaccattagatctttgcccaaaaaagaacaccgtatgatcatgcatatctattgtattttacggtgaagcaacaagacctaatgcnnnnnnnaccttttc 509  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||       ||||||||    
T  30310319 aaccattagatctttgcccaaaaaagaacaccatatgatcatgcatatctattgtattttacggtgaagcaacaacacctaatgctttttttaccttttc 30310418  T
Q  510 ttcatcttcttccctc 525  Q
    ||||||||||||||||    
T  30310419 ttcatcttcttccctc 30310434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 47456493 - 47456381
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||||||||||| |||    
T  47456493 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtactttttggtccctcattttttcttctgtt 47456394  T
Q  310 tgccaaataaatc 322  Q
    |||||||||||||    
T  47456393 tgccaaataaatc 47456381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 211 - 357
Target Start/End: Original strand, 40508377 - 40508523
Alignment:
Q  211 gcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgttt 310  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||| |||||| ||||||     
T  40508377 gcttatttgatccaatggtcccctaaataatttcaagttttcatttttgtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgtta 40508476  T
Q  311 gccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    ||||||||||||| |   ||||||  |||| ||||||||||||||||    
T  40508477 gccaaataaatccttcggtgttaagtttaatcccaaatgtctatggt 40508523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 43459453 - 43459599
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| | ||| | ||||||||||||||||||||||||| |||||||||||||||||||| | ||| |||||||||| ||||| ||||||    
T  43459453 ggcttatttgatccattagtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtgcgtttaagtccctcatgttttcctccgtt 43459552  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    ||||||||||||| | | |||||||  ||||| |||||||||||||||    
T  43459553 tgccaaataaatctc-ggctgttaagtttaactccaaatgtctatggt 43459599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 6173568 - 6173455
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||  |||| ||||||||||||||||||||  |||||||| |||||| ||||||    
T  6173568 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttgtacccataattaataaaacgtacattttggtccctcactttttcctccgtt 6173469  T
Q  310 tgccaaataaatcc 323  Q
    ||||||||||||||    
T  6173468 tgccaaataaatcc 6173455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 210 - 409
Target Start/End: Complemental strand, 40509852 - 40509653
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||| | |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||||| |||||| ||||||    
T  40509852 ggcttatttgtttcaatggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgtt 40509753  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagag-agtccaccatagactttgataatttttaaaattt 408  Q
    | |||||||||||  |   ||||||  |||||||||||||||||| || ||| ||| ||| ||||  |||||||||||||||   |||||||| ||||||    
T  40509752 taccaaataaatcattcggtgttaagtttaaccccaaatgtctatagtggaccaacctta-agagtggtccaccatagacttcattaattttttaaattt 40509654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 4300166 - 4300054
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||| ||| | | ||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||| |||||| || |||    
T  4300166 ggcttatttgatccaatcgtcccctgaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcactttttcctctgtt 4300067  T
Q  310 tgccaaataaatc 322  Q
    |||||||||||||    
T  4300066 tgccaaataaatc 4300054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 47454335 - 47454481
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctc-attttttcttccgt 308  Q
    ||||||||||||||| ||||| || ||||||||||||| |||||||||| ||||||||||||||||||||||||||  ||||||| | |||||||| |||    
T  47454335 ggcttatttgatccagtggtccctcaaataatttcaagctttcattttggtcccacaattaataaaacgtacattttggtccctcaagtttttctt-cgt 47454433  T
Q  309 ttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    |||||||||||||||| |||| ||||  ||||| | |||||||||||||    
T  47454434 ttgccaaataaatccc-gactattaactttaactctaaatgtctatggt 47454481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 210 - 369
Target Start/End: Complemental strand, 32256513 - 32256355
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| ||||| ||||||||||| |||| |||  |||||||| |||||| ||| ||    
T  32256513 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccataattaataaaatgtaccttttggtccctcactttttcctccatt 32256414  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacatta 369  Q
    |||||||||||| ||  || |||||  |||||  |||||||||||||| ||| |||||||    
T  32256413 tgccaaataaattcc-aaccgttaactttaacttcaaatgtctatggtggaccaacatta 32256355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 211 - 381
Target Start/End: Complemental strand, 45455489 - 45455320
Alignment:
Q  211 gcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgttt 310  Q
    ||||||||||||| |||||| ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||   ||||||| |||||  |||||||    
T  45455489 gcttatttgatccgatggtcccttaattaatttcaaattttcattttggtcccacaattaataaaacgtacattttgatccctcacttttttctccgttt 45455390  T
Q  311 gccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccac 381  Q
    ||||||||||| | || |||||||  ||||||| ||||| |||| ||  || ||||||||| | |||||||    
T  45455389 gccaaataaat-catggctgttaagtttaaccctaaatgcctatagtgtaccaacattatatatagtccac 45455320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 210 - 409
Target Start/End: Complemental strand, 22115283 - 22115083
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaa-taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgt 308  Q
    |||||||||| | |||||||| | |||| ||||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||||| |||||| |||||    
T  22115283 ggcttatttgtttcaatggtcccctaaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgt 22115184  T
Q  309 ttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagag-agtccaccatagactttgataatttttaaaatt 407  Q
    |  |||||||||||  |   ||||||  |||||||||||||||||| || ||| ||| ||| ||||  |||||||||||||||   |||||||| |||||    
T  22115183 tnaccaaataaatcnttcggtgttaagtttaaccccaaatgtctatagtggaccaacctta-agagtggtccaccatagacttcattaattttttaaatt 22115085  T
Q  408 tt 409  Q
    ||    
T  22115084 tt 22115083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 213 - 323
Target Start/End: Complemental strand, 43460938 - 43460828
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgc 312  Q
    ||||||||| ||||| || || |||| |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||| ||| |||||    
T  43460938 ttatttgattcaatgatccctcaaattatttgaagttttcattttggtcccacaattaataaaacgtacattttagtccctcactttttcctccatttgc 43460839  T
Q  313 caaataaatcc 323  Q
    |||||||||||    
T  43460838 caaataaatcc 43460828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 33096867 - 33096980
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||   ||||||||||||||||| ||| |||  |||||||| |||||| ||||||    
T  33096867 ggcttatttgatccaatggtccctcaaataatttcaagttctcattttaggcccacaattaataaaacttaccttttggtccctcactttttcctccgtt 33096966  T
Q  310 tgccaaataaatcc 323  Q
    ||||||||||||||    
T  33096967 tgccaaataaatcc 33096980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 4298711 - 4298823
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||| | |||||||||| ||||||| |||||||||||||||||||||||| ||   ||| ||||||||| |||||| || |||    
T  4298711 ggcttatttgatccaatggtcccctaaataattttaagtttttattttgatcccacaattaataaaatgtgggtttaagtccctcactttttcctctgtt 4298810  T
Q  310 tgccaaataaatc 322  Q
    |||||||||||||    
T  4298811 tgccaaataaatc 4298823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 32602931 - 32603043
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| |||||  | ||||||||||||||||| |||||| ||||| |||||||||||||||| ||| ||||||||| |||||  ||||||    
T  32602931 ggcttatttgatccattggtccttcaaataatttcaagtttttattttggtcccataattaataaaacgtacgttttagtccctcactttttactccgtt 32603030  T
Q  310 tgccaaataaatc 322  Q
    |||||||||||||    
T  32603031 tgccaaataaatc 32603043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 341
Target Start/End: Original strand, 30333307 - 30333414
Alignment:
Q  234 taaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgtta 333  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  |||  ||||||||||||||  |||||||| |||||||||| |  |||||||    
T  30333307 taaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcatttttttctccgtttgtcaaataaatcacaaactgtta 30333406  T
Q  334 aaattaac 341  Q
    || |||||    
T  30333407 aacttaac 30333414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 226 - 349
Target Start/End: Original strand, 32255003 - 32255125
Alignment:
Q  226 tggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    ||||| || |||||||||||| |||| |||||| ||||| ||||||||||||||||||||   ||||||| |||||| |||||||||||||||||||||     
T  32255003 tggtccctcaaataatttcaaatttttattttggtcccataattaataaaacgtacattttgatccctcactttttcctccgtttgccaaataaatccc- 32255101  T
Q  326 gactgttaaaattaaccccaaatg 349  Q
    ||| |||||  |||||||||||||    
T  32255102 gacggttaagtttaaccccaaatg 32255125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 211 - 408
Target Start/End: Complemental strand, 47060592 - 47060395
Alignment:
Q  211 gcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgttt 310  Q
    ||||||| ||| ||||||| || ||| |||||| |||||||||||||| ||| | |||||||||||||||| |||  ||||||||   ||| ||||||||    
T  47060592 gcttattagattcaatggtttcctaattaattttaagttttcattttggtcctataattaataaaacgtacgttttggtccctcacccttttttccgttt 47060493  T
Q  311 gccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgat-aatttttaaaattt 408  Q
    ||||||||||| || |||||||||  ||||| |||||||| |||||| ||| ||| |||   | |||||||||||||| ||  | ||||||||||||||    
T  47060492 gccaaataaat-ccggactgttaagtttaacaccaaatgtatatggtggaccaaccttaagaatagtccaccatagaccttattaaatttttaaaattt 47060395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 30311587 - 30311474
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| | ||| | ||||||||||||| ||||||||||| |||||||||||||||||| ||| ||| |||||||||||||||  || |||    
T  30311587 ggcttatttgatccattagtcccctaaataatttcaaattttcattttggtcccacaattaataaaacatacgtttaagtccctcatttttttctctgtt 30311488  T
Q  310 tgccaaataaatcc 323  Q
     ||||| |||||||    
T  30311487 agccaattaaatcc 30311474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 45454036 - 45454149
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||  ||||||| | ||| |||||||| |||||||||||| || || |||||||||||| ||| ||| ||||||||| |||||| ||||||    
T  45454036 ggcttatttgattaaatggtcccctaattaatttcacgttttcattttggtctcataattaataaaacatacgttttagtccctcactttttcctccgtt 45454135  T
Q  310 tgccaaataaatcc 323  Q
    ||||||||||||||    
T  45454136 tgccaaataaatcc 45454149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 208 - 357
Target Start/End: Original strand, 47059104 - 47059254
Alignment:
Q  208 tgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccg 307  Q
    |||||||||| ||| |||||||| | ||| |||||| |||||||||||||| ||| ||||||||||||| |||| |||   ||||||| |||||| ||||    
T  47059104 tgggcttattagattcaatggtcccctaattaattttaagttttcattttggtcctacaattaataaaatgtacgttttgatccctcactttttcctccg 47059203  T
Q  308 tttgccaaataaatccctgactgttaaaattaacc--ccaaatgtctatggt 357  Q
    |||||||||||||| |||||| |||||  ||||||  ||||| |||||||||    
T  47059204 tttgccaaataaat-cctgaccgttaagtttaaccctccaaaagtctatggt 47059254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 236 - 385
Target Start/End: Original strand, 11344531 - 11344677
Alignment:
Q  236 aataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaa 335  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||    |||||||| ||||||||||  |   ||||||     
T  11344531 aataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccttcatttt---ctccgtttgtcaaataaatctttcggtgttaag 11344627  T
Q  336 attaaccccaaatgtctatggttgactaacattatagagagtccaccata 385  Q
     |||||| ||||| |||||||| | | ||||||||||| ||| |||||||    
T  11344628 tttaacctcaaatatctatggtggtccaacattatagatagtgcaccata 11344677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 357
Target Start/End: Complemental strand, 22538976 - 22538820
Alignment:
Q  200 ataaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcatttt 299  Q
    ||||||||  |||||||| ||||   ||||| ||||  |||||||| |||||| ||||| |||||||||||||||||   || ||| |||||||||| ||    
T  22538976 ataaaataatggcttattagatcgtttggtcccttatttaatttcatgttttctttttggtcccacaattaataaaaatgacgttttagtccctcatctt 22538877  T
Q  300 ttcttccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    ||| ||||||||||||||||||| | ||| |||||  ||||| |||||| ||||||||    
T  22538876 ttcctccgtttgccaaataaatctc-gacggttaactttaactccaaatatctatggt 22538820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 357
Target Start/End: Complemental strand, 33779202 - 33779058
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| | ||| | |||||||||||||||||||||||||  |||||||||||||||||  || ||| ||||||||  |||||| ||||      
T  33779202 ggcttatttgatccattagtcccctaaataatttcaagttttcattttggccccacaattaataaaactcacgttttagtccctcgctttttcctccg-- 33779105  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
      || ||||||||  || |||||||  |||||| ||||||||||||||    
T  33779104 -ccccaataaatctttggctgttaagtttaaccacaaatgtctatggt 33779058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 233 - 357
Target Start/End: Original strand, 11501201 - 11501324
Alignment:
Q  233 ttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgtt 332  Q
    |||| |||||||| |||||||||||| ||||||| |||||||||    ||||| |||||||||  ||||| ||| ||||||||||||||||| |||||||    
T  11501201 ttaattaatttcatgttttcattttggtcccacagttaataaaaatagcattttagtccctcaccttttcctccatttgccaaataaatccc-gactgtt 11501299  T
Q  333 aaaattaaccccaaatgtctatggt 357  Q
    ||  |||||  ||||||||||||||    
T  11501300 aactttaacttcaaatgtctatggt 11501324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 424
Target Start/End: Complemental strand, 9662251 - 9662142
Alignment:
Q  313 caaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaattttaac 412  Q
    |||||||||||  |||||||||| |||||  |||||||||||||| ||| ||||||||||| |||||||||||||| ||  ||||||||  |||||||||    
T  9662251 caaataaatcca-gactgttaaatttaacttcaaatgtctatggtggaccaacattatagatagtccaccatagaccttattaattttt-caattttaac 9662154  T
Q  413 cattagatcttt 424  Q
    |||| |||||||    
T  9662153 catttgatcttt 9662142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 373
Target Start/End: Complemental strand, 24283068 - 24282931
Alignment:
Q  235 aaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaa 334  Q
    |||||||||||  ||||||||||| | |||||||||| |||||   |  || |||||||||  ||||| |||||||||||||||||||| ||  ||||||    
T  24283068 aaataatttcagattttcattttggttccacaattaa-aaaacaggcgctttagtccctcacattttcctccgtttgccaaataaatccatgggtgttaa 24282970  T
Q  335 aattaaccccaaatgtctatggttgactaacattataga 373  Q
      ||||||||||||||||||||| ||  |||||||||||    
T  24282969 ctttaaccccaaatgtctatggtggatcaacattataga 24282931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 210 - 356
Target Start/End: Complemental strand, 30334755 - 30334613
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||| | |||||| ||||| | ||| ||||||||||||||||||||  |||||||||||||||||||||| |||  ||||||||    | | ||||||    
T  30334755 ggcttaatagatccattggtcccctaactaatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctca----tccctccgtt 30334660  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatgg 356  Q
    |||||||||||| ||  || ||||||  |||| | ||||||||||||    
T  30334659 tgccaaataaattccaaaccgttaaatctaactctaaatgtctatgg 30334613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 46835676 - 46835785
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgc 312  Q
    |||| ||||||||||||| ||||||||||||||| ||||| ||||  ||| ||||||||||||| |||  ||| |||| |||| |||||| || |||||     
T  46835676 ttatatgatccaatggtcccttaaataatttcaaattttctttttagtcctacaattaataaaatgtatttttaagtctctcaatttttcctctgtttgt 46835775  T
Q  313 caaataaatc 322  Q
    ||||||||||    
T  46835776 caaataaatc 46835785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 22337457 - 22337343
Alignment:
Q  241 tttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaattaa 340  Q
    ||||| ||||||||||||||||||||||||||||||    ||||  ||||||| |  ||||| |||||||||||||||||| |||||| |||||| ||||    
T  22337457 tttcatgttttcattttgatcccacaattaataaaaatggcattc-agtcccttacattttcctccgtttgccaaataaat-cctgaccgttaaatttaa 22337360  T
Q  341 ccccaaatgtctatggt 357  Q
    |  ||||||||||||||    
T  22337359 cttcaaatgtctatggt 22337343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 40811338 - 40811394
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccaca 266  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  40811338 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccaca 40811394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 41079965 - 41079807
Alignment:
Q  197 ataataaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcat 296  Q
    ||||||||| || || |||||  ||||| ||||| || || ||||||| | |||| |||||| ||||||||| |||||||||||| |||  |||||| ||    
T  41079965 ataataaaaaataggtttattatatccattggtccctcaattaatttccattttttattttggtcccacaat-aataaaacgtacgttttggtcccttat 41079867  T
Q  297 tttttcttccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
     ||||| ||||||||| |||||||||||| || |||||  ||||| |||||| ||||||||    
T  41079866 cttttcctccgtttgctaaataaatccct-accgttaactttaactccaaatatctatggt 41079807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 13564329 - 13564243
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccc 324  Q
    |||||||  |||||||||||| ||||||||||||||||||   | ||| |||||||||  ||||| |||||||||||||||||||||    
T  13564329 taatttcttgttttcattttggtcccacaattaataaaactggcgttttagtccctcacattttcctccgtttgccaaataaatccc 13564243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 422
Target Start/End: Original strand, 3413554 - 3413742
Alignment:
Q  234 taaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgtta 333  Q
    |||||||||||  |||||||||||| ||| |||||||||||||    | ||| |||||||||  ||||  || ||||||||||||||||||| |||||||    
T  3413554 taaataatttcgtgttttcattttggtcctacaattaataaaaatggcgttttagtccctcaccttttactctgtttgccaaataaatccctaactgtta 3413653  T
Q  334 aaattaaccccaaatgtctatggttgactaacattatagag-agtccaccatagactttgataatttttaaaattttaaccattagatct 422  Q
    |  |||||  || ||||||||||| ||  ||  ||| ||||  |||||||||||||||   |||||||| ||||||||||| || |||||    
T  3413654 agtttaacttcagatgtctatggtggatcaatctta-agagttgtccaccatagacttcattaattttttaaattttaaccgtttgatct 3413742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 349
Target Start/End: Original strand, 22336005 - 22336115
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||  |||||||||||| |||||||||||||||||    | ||| |||||||||  ||||| || |||||||||||||||||| || ||||||  |    
T  22336005 taatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctcagtttgccaaataaatccc-gaatgttaagtt 22336103  T
Q  338 taaccccaaatg 349  Q
    ||||||||||||    
T  22336104 taaccccaaatg 22336115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 234 - 323
Target Start/End: Complemental strand, 3414928 - 3414839
Alignment:
Q  234 taaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatcc 323  Q
    |||||||||||| |||||||||||| ||||| |||||||||||    | ||| ||||| ||| |||||| ||| ||||||||||||||||    
T  3414928 taaataatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccttcactttttcctccatttgccaaataaatcc 3414839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 325
Target Start/End: Original strand, 24281096 - 24281188
Alignment:
Q  234 taaataatttcaagttttcattttgatcccacaattaataaaacgta-catttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    |||||||||||| ||||| |||||| |||||||||||||||||   | | ||| ||||||||| |||||  |||||| |||||||||||||||    
T  24281096 taaataatttcatgtttttattttggtcccacaattaataaaaacaagcgttttagtccctcaattttttatccgttcgccaaataaatccct 24281188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 25533202 - 25533252
Alignment:
Q  226 tggtctcttaaataatttcaagttttcattttgatcccacaattaataaaa 276  Q
    ||||||||||| ||||||||||||||||||||| ||||| || ||||||||    
T  25533202 tggtctcttaattaatttcaagttttcattttggtcccataactaataaaa 25533252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 40812703 - 40812617
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccc 324  Q
    |||||||| |||||||||||| | ||| |||||||||||||||| |||   |||||||| ||||| || ||||| |||||| |||||    
T  40812703 taatttcatgttttcattttggttccataattaataaaacgtacgttttgctccctcatattttcctctgtttgtcaaatatatccc 40812617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 351
Target Start/End: Original strand, 24844336 - 24844399
Alignment:
Q  287 agtccctcattttttcttccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtc 351  Q
    |||||||||  |||||||||||||||||||||||| ||| ||||||||  |||||| ||||||||    
T  24844336 agtccctcacattttcttccgtttgccaaataaat-cctcactgttaagtttaacctcaaatgtc 24844399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 35664399 - 35664287
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||| |||||| || || ||||| ||||||| | ||||||||||||||||| || ||||||||  ||| |||  |||||| | ||||   ||||||    
T  35664399 ggcttattagatccattgatcccttaattaatttccatttttcattttgatcccataagtaataaaaaataccttttggtcccttagttttatctccgtt 35664300  T
Q  310 tgccaaataaatc 322  Q
    ||||||| |||||    
T  35664299 tgccaaaaaaatc 35664287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 276
Target Start/End: Complemental strand, 11502517 - 11502474
Alignment:
Q  233 ttaaataatttcaagttttcattttgatcccacaattaataaaa 276  Q
    |||| |||||||| |||||||||||||||||||| |||||||||    
T  11502517 ttaactaatttcatgttttcattttgatcccacatttaataaaa 11502474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 24844440 - 24844402
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaa 276  Q
    |||||||| |||||||||||||||| |||||||||||||    
T  24844440 taatttcatgttttcattttgatcctacaattaataaaa 24844402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 38539691 - 38539736
Alignment:
Q  232 cttaaataatttcaagttttcattttgatcccacaattaataaaac 277  Q
    ||||| ||||||||||||||||||||| ||||| || |||||||||    
T  38539691 cttaattaatttcaagttttcattttggtcccataaataataaaac 38539736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 46202379 - 46202334
Alignment:
Q  232 cttaaataatttcaagttttcattttgatcccacaattaataaaac 277  Q
    ||||||||||||  ||||||||||||||||||| || |||||||||    
T  46202379 cttaaataatttacagttttcattttgatcccataagtaataaaac 46202334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 173; Significance: 9e-93; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 69536 - 69336
Alignment:
Q  8 aaataccacggtgcggatttaaaatcacacaatagactagagatgaaaagattgcatgataattttcgtatttcgttacaatttcaatttcaatttgggt 107  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  69536 aaataccagggtgcggatttaaaatcacaccatagacaagagatgaaaagattgcatgataattttcgtatttcgttacaatttcaatttcaatttgggt 69437  T
Q  108 tgaaatgacatcctaaatttcaatttttcccttttctacacatgggtcctgtacatggacgtttttcacttcttctgttttacttttcaataataaaata 207  Q
    ||||||||||||||||||||||| |||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  69436 tgaaatgacatcctaaatttcaaattttccttgttctgcacatgggtcctgtacatggacgtttttcacttcttctgttttacttttcaataataaaata 69337  T
Q  208 t 208  Q
    |    
T  69336 t 69336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 199 - 424
Target Start/End: Complemental strand, 53624490 - 53624267
Alignment:
Q  199 aataaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattt 298  Q
    |||||||||  ||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| |||| ||    
T  53624490 aataaaataaaggcttatttgatccaatggtccctcaaataatttcaagttttcattttgatctcacaattaataaaacgtacattttggtcactcactt 53624391  T
Q  299 tttcttccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatt 398  Q
    |||  || ||||||||||||||| || ||| ||||   |||||||||||||| |||||| ||| ||||||||||| |||||||||||||| ||  |||||    
T  53624390 ttttctcggtttgccaaataaat-ccagacggttaggtttaaccccaaatgtatatggtggaccaacattatagatagtccaccatagaccttattaatt 53624292  T
Q  399 tttaaaattttaaccattagatcttt 424  Q
    |||  |||||||||| || |||||||    
T  53624291 ttt-caattttaaccttttgatcttt 53624267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 210 - 390
Target Start/End: Complemental strand, 53194988 - 53194808
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||| || ||||| |||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||  |||||||| |||||| ||  ||    
T  53194988 ggcttatttaattcaatgatctcttgaataatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctatt 53194889  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactt 390  Q
    |||||||||||||| || |||||||  ||||| | ||||||||||||| |||| |||||||||| ||||||||||||||||    
T  53194888 tgccaaataaatccatgtctgttaagtttaactcaaaatgtctatggtggactcacattatagatagtccaccatagactt 53194808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 210 - 388
Target Start/End: Original strand, 40364317 - 40364495
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||| ||||||  | ||||||||||||||||||||||||| ||| | ||||||||||| |||| ||| |||||||||||||||  ||||||    
T  40364317 ggcttatttgatctaatggttccctaaataatttcaagttttcattttggtcctaaaattaataaaatgtacgtttaagtccctcatttttttctccgtt 40364416  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagac 388  Q
    |||||||||||||| |   ||||||  ||||||  |||||||||||||  || ||||||||||| ||||||||||||||    
T  40364417 tgccaaataaatccttcggtgttaagtttaacctaaaatgtctatggtgaaccaacattatagatagtccaccatagac 40364495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 38240904 - 38241050
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| ||||| ||| ||||||||||| |||| |||||| |||||||||||||||||||||| ||| ||||| |||  ||||| ||||||    
T  38240904 ggcttatttgatccattggtcccttgaataatttcaaatttttattttggtcccacaattaataaaacgtacgtttaagtccttcagattttcctccgtt 38241003  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    ||||||||||||||| | |||||||  ||||| |||||||||||||||    
T  38241004 tgccaaataaatccc-ggctgttaagtttaactccaaatgtctatggt 38241050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 204 - 319
Target Start/End: Original strand, 40244179 - 40244294
Alignment:
Q  204 aatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttct 303  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||  |||||     
T  40244179 aatataggcttatttgatccattggtcccttaaataatttcaagttttcattttggtctcacaattaataaaacgtacattttggtccctcaaattttcc 40244278  T
Q  304 tccgtttgccaaataa 319  Q
    ||||||||||||||||    
T  40244279 tccgtttgccaaataa 40244294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 210 - 348
Target Start/End: Original strand, 53187557 - 53187693
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||| ||||||| | ||||||||||||||||||||||||||||  ||||||||||||| |||  |||| |||||||| |||||||||||||    
T  53187557 ggcttatttgatcgaatggtcccctaaataatttcaagttttcattttgatcttacaattaataaaatgtatgtttg-gtccctcactttttcttccgtt 53187655  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaat 348  Q
    |||||||||||||||| || |||||  ||||||||||||    
T  53187656 tgccaaataaatccct-accgttaagtttaaccccaaat 53187693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 18197145 - 18197258
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||  ||| || |||||||||||| ||||||||||| |||||||||||||||||||||| |||  ||||||||||||||| ||||||    
T  18197145 ggcttatttgatccaaatgtccctcaaataatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtt 18197244  T
Q  310 tgccaaataaatcc 323  Q
    ||||||||||||||    
T  18197245 tgccaaataaatcc 18197258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 215 - 388
Target Start/End: Original strand, 18442255 - 18442424
Alignment:
Q  215 atttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgcca 314  Q
    |||||||||| |||||   ||||||||||||||||||||||||| ||||||||||||||||||  || ||| ||||| |||||||||| ||   ||||||    
T  18442255 atttgatccattggtcctctaaataatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc---ttgcca 18442351  T
Q  315 aataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagac 388  Q
    ||||||| | ||  ||||||  ||||||||||||||||||||| ||| |||||||| || ||||||||||||||    
T  18442352 aataaattcatg-ttgttaagtttaaccccaaatgtctatggtggaccaacattatcgatagtccaccatagac 18442424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 215 - 388
Target Start/End: Original strand, 19487329 - 19487498
Alignment:
Q  215 atttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgcca 314  Q
    |||||||||| |||||   ||||||||||||||||||||||||| ||||||||||||||||||  || ||| ||||| |||||||||| ||   ||||||    
T  19487329 atttgatccattggtcctctaaataatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc---ttgcca 19487425  T
Q  315 aataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagac 388  Q
    ||||||| | ||  ||||||  ||||||||||||||||||||| ||| |||||||| || ||||||||||||||    
T  19487426 aataaattcatg-ttgttaagtttaaccccaaatgtctatggtggaccaacattatcgatagtccaccatagac 19487498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 38242634 - 38242521
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| |||||  || |||    
T  38242634 ggcttatttgattcaaaggtccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtaccttttggtccctcacttttttatctgtt 38242535  T
Q  310 tgccaaataaatcc 323  Q
    ||||||||||||||    
T  38242534 tgccaaataaatcc 38242521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 210 - 354
Target Start/End: Complemental strand, 50810952 - 50810808
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||| | |||||| ||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||  || ||| |||||||||||||||| ||||||    
T  50810952 ggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtt 50810853  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctat 354  Q
    ||||||||||||| |  ||||||||  ||||| | ||||||||||    
T  50810852 tgccaaataaatctcaaactgttaactttaactctaaatgtctat 50810808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 210 - 354
Target Start/End: Original strand, 50864912 - 50865056
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||| | |||||| ||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||  || ||| |||||||||||||||| ||||||    
T  50864912 ggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtt 50865011  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctat 354  Q
    ||||||||||||| |  ||||||||  ||||| | ||||||||||    
T  50865012 tgccaaataaatctcaaactgttaactttaactctaaatgtctat 50865056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 210 - 319
Target Start/End: Complemental strand, 12108101 - 12107992
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||||||| |||||||| ||||||||| || ||||  |||||||| |||||| ||||||    
T  12108101 ggcttatttgattcaatagtcccttaaataatttcaagttttcattttggtcccacaactaataaaacatatattttggtccctcactttttcctccgtt 12108002  T
Q  310 tgccaaataa 319  Q
    ||||||||||    
T  12108001 tgccaaataa 12107992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 18458772 - 18458663
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgc 312  Q
    |||||||||||| | ||| | |||||||||||||||||| |||||| |||||||||||||||||| | | ||| ||||||||| |||||| |||||||||    
T  18458772 ttatttgatccattagtcccctaaataatttcaagtttttattttggtcccacaattaataaaacttgcgttttagtccctcactttttcctccgtttgc 18458673  T
Q  313 caaataaatc 322  Q
    ||||||||||    
T  18458672 caaataaatc 18458663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 23443572 - 23443463
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgc 312  Q
    ||||||||||||||| || ||||| |||||| || ||||||||||| ||||| |||||||||||||||| ||| ||||| |||| |||||||| ||||||    
T  23443572 ttatttgatccaatgatcccttaattaattttaacttttcattttggtcccaaaattaataaaacgtacctttaagtccttcatcttttcttctgtttgc 23443473  T
Q  313 caaataaatc 322  Q
    ||||||||||    
T  23443472 caaataaatc 23443463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 37735304 - 37735416
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| |||||  ||||||||||| |||||||||||||| ||||| |||||||||||||||  ||| |||||||||||||||  | ||||    
T  37735304 ggcttatttgatccattggtcctttaaataattttaagttttcattttggtcccataattaataaaacgtatgttttagtccctcatttttttcttcgtt 37735403  T
Q  310 tgccaaataaatc 322  Q
    || ||||||||||    
T  37735404 tgtcaaataaatc 37735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 318
Target Start/End: Complemental strand, 34819401 - 34819295
Alignment:
Q  211 gcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgttt 310  Q
    |||||||||||||| | ||| || |||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||| ||| |||||| || ||||    
T  34819401 gcttatttgatccattagtccctcaaataatttcaagttttcattttgatcctacaattaataaaacgtacgtttaagtccttcactttttc-tctgttt 34819303  T
Q  311 gccaaata 318  Q
    ||||||||    
T  34819302 gccaaata 34819295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 37736199 - 37736089
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||| |||| || | ||| |||||||||||||| |||||||||||| || ||||||||||||||||||| ||| ||||||||| |||||  ||||||    
T  37736199 ggcttatgtgattcattagtcccttaaataatttcatgttttcattttggtctcacaattaataaaacgtacgttttagtccctcacttttttctccgtt 37736100  T
Q  310 tgccaaataaa 320  Q
    |||||||||||    
T  37736099 tgccaaataaa 37736089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 50809435 - 50809531
Alignment:
Q  226 tggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatc 322  Q
    ||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||  || ||| ||||||||| |||||| |||||||||||||||||||    
T  50809435 tggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaataaatc 50809531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 50866427 - 50866331
Alignment:
Q  226 tggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatc 322  Q
    ||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||  || ||| ||||||||| |||||| |||||||||||||||||||    
T  50866427 tggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaataaatc 50866331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 210 - 324
Target Start/End: Original strand, 34818084 - 34818198
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgta-catttgagtccctcattttttcttccgt 308  Q
    |||||||||||| ||||||||   ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||| ||||||||  ||||| ||| |    
T  34818084 ggcttatttgattcaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtatgatttg-gtccctcagattttcctccat 34818182  T
Q  309 ttgccaaataaatccc 324  Q
    ||||||||||||||||    
T  34818183 ttgccaaataaatccc 34818198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 234 - 357
Target Start/End: Original strand, 42684898 - 42685021
Alignment:
Q  234 taaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgtta 333  Q
    |||||||||| |||||||||||||| | ||| ||| ||||||||  || ||| |||||||||||||||  |  |||| |||||||||||| |||||||||    
T  42684898 taaataattttaagttttcattttggttccataatgaataaaactgacgttttagtccctcatttttttctatgtttaccaaataaatccttgactgtta 42684997  T
Q  334 aaattaaccccaaatgtctatggt 357  Q
    |  |||||||||||||||||||||    
T  42684998 agtttaaccccaaatgtctatggt 42685021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 233 - 323
Target Start/End: Original strand, 41544683 - 41544773
Alignment:
Q  233 ttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatcc 323  Q
    |||||||||||||||||||||||||| ||| | |||||||| ||||||| ||| ||||||||| |||||| || |||||||||||||||||    
T  41544683 ttaaataatttcaagttttcattttggtcctataattaatataacgtacgtttaagtccctcactttttcctctgtttgccaaataaatcc 41544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 36176625 - 36176512
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcatt-ttttcttccgt 308  Q
    ||||||||||||||||||||| | | | |||||||| |||||||||||| ||||||||||||||||| |||  |||  |||||||||| ||||| || ||    
T  36176625 ggcttatttgatccaatggtcccctgattaatttcatgttttcattttggtcccacaattaataaaatgtatgttttggtccctcatttttttcctctgt 36176526  T
Q  309 ttgccaaataaatc 322  Q
    ||||||||||||||    
T  36176525 ttgccaaataaatc 36176512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 388
Target Start/End: Complemental strand, 20288306 - 20288164
Alignment:
Q  246 agttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaattaacccca 345  Q
    ||||||||||||||||||| ||||||||||||  |  | |  ||||||||  |||   || ||| | ||||||||||||||||||||||  ||||| |||    
T  20288306 agttttcattttgatcccataattaataaaactcatgtgttggtccctcaagtttgtctctgttagtcaaataaatccctgactgttaagtttaactcca 20288207  T
Q  346 aatgtctatggttgactaacattatagagagtccaccatagac 388  Q
    |||||||||||| ||| ||||||||||| | ||||||||||||    
T  20288206 aatgtctatggtggaccaacattatagatattccaccatagac 20288164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 238 - 416
Target Start/End: Original strand, 24403265 - 24403443
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||||||||||||| || || || |||||||||||  ||  |||  ||||||||  ||  | |||||||| ||| ||||||| ||  ||||||  |    
T  24403265 taatttcaagttttcattatggtctcataattaataaaatttatgttttggtccctcaagttcacctccgtttgtcaagtaaatccatgtttgttaactt 24403364  T
Q  338 taaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaattttaaccatt 416  Q
    |||||| |||||||||||||  |||||||||||||| ||||||||||| || ||  ||||||||  |||||||||||||    
T  24403365 taaccctaaatgtctatggtgaactaacattatagatagtccaccataaaccttattaattttttcaattttaaccatt 24403443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 349
Target Start/End: Original strand, 3208482 - 3208620
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||| ||||| |||||   ||| ||||||| | ||||||||||| ||||| |||||||||||||||| |||   ||||| |||||||| ||||||    
T  3208482 ggcttatttaatccattggtcctctaattaatttccatttttcattttggtcccataattaataaaacgtacgttttgatcccttattttttcctccgtt 3208581  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    || ||||||||| ||| || |||||  |||||||||||||    
T  3208582 tgtcaaataaat-ccttaccgttaagtttaaccccaaatg 3208620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 3210049 - 3209982
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaac 277  Q
    |||||||||||| |||||||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  3210049 ggcttatttgattcaatggtcccttaaataattttaaattttcattttggtcccacaattaataaaac 3209982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 385
Target Start/End: Original strand, 36175317 - 36175435
Alignment:
Q  266 aattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaac 365  Q
    ||||||| |||||||| |||  || |||||||||||  |||||||||||||||||| || |||||||||  ||||||||||||||||||| | ||  |||    
T  36175317 aattaatgaaacgtacgttttggtgcctcatttttttctccgtttgccaaataaat-ccggactgttaagtttaaccccaaatgtctatgatggatcaac 36175415  T
Q  366 attatagagagtccaccata 385  Q
    |||||| | |||||||||||    
T  36175416 attatatatagtccaccata 36175435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 53420317 - 53420462
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||||   ||||| | ||| ||||||||  ||||||||||| ||| |||||||||||||||||| |||  |||||||| |||||  ||||||    
T  53420317 ggcttatttgatc---tggtcccctaactaatttcatattttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttttctccgtt 53420413  T
Q  310 tgccaaataaatccct-gactgttaaaattaaccccaaatgtctatggt 357  Q
    |  ||||||||||||| | || ||||  |||||| ||||||||||||||    
T  53420414 tatcaaataaatccctagtctattaagtttaaccacaaatgtctatggt 53420462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 238 - 357
Target Start/End: Original strand, 27837946 - 27838063
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||| ||||||||||||||||     | ||| |||||||||  ||||| |||||||||||||||||| |||||||||| || |    
T  27837946 taatttcatgttttcattttggtcccacaattaataaatatggcgttttagtccctcaccttttcctccgtttgccaaataaat-cctgactgtt-aact 27838043  T
Q  338 taaccccaaatgtctatggt 357  Q
    ||||  ||||||||||||||    
T  27838044 taacttcaaatgtctatggt 27838063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 210 - 325
Target Start/End: Complemental strand, 53421879 - 53421764
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| |||| ||  | ||| |||||| | |||||||||||  ||| |||||||||||||||||| |||  |||||||| |||||  || |||    
T  53421879 ggcttatttgattcaattgttccctaattaattttacgttttcattttagtcctacaattaataaaacgtacgttttggtccctcacttttttctctgtt 53421780  T
Q  310 tgccaaataaatccct 325  Q
    ||||||||||||||||    
T  53421779 tgccaaataaatccct 53421764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 55328422 - 55328357
Alignment:
Q  211 gcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaa 276  Q
    |||||||||||||| | ||||| ||| |||||||||||||||||||||||| || |||||||||||    
T  55328422 gcttatttgatccattagtctcctaattaatttcaagttttcattttgatctcataattaataaaa 55328357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 304 - 388
Target Start/End: Complemental strand, 20336681 - 20336597
Alignment:
Q  304 tccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagac 388  Q
    |||||| | ||||||||| | ||||||||||  ||||| ||||||||||||| | ||| ||||||||||| ||||||||||||||    
T  20336681 tccgttagtcaaataaattcatgactgttaagtttaactccaaatgtctatgttggaccaacattatagatagtccaccatagac 20336597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 388
Target Start/End: Complemental strand, 20314779 - 20314704
Alignment:
Q  313 caaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagac 388  Q
    ||||||||| | ||||||||||  ||||| ||||||||||||| | ||| ||||||||||| ||||||||||||||    
T  20314779 caaataaattcatgactgttaagtttaactccaaatgtctatgttagaccaacattatagatagtccaccatagac 20314704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 247 - 357
Target Start/End: Original strand, 10730920 - 10731029
Alignment:
Q  247 gttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaattaaccccaa 346  Q
    |||||||||||| ||||| |||||||||||    |||||  |||| ||| |||||  ||||||||||||||||||||| |||||||||  |||||  |||    
T  10730920 gttttcattttggtcccataattaataaaaatggcattttggtccttcacttttttctccgtttgccaaataaatccc-gactgttaactttaacttcaa 10731018  T
Q  347 atgtctatggt 357  Q
    |||||||||||    
T  10731019 atgtctatggt 10731029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 413
Target Start/End: Complemental strand, 21074267 - 21074195
Alignment:
Q  341 ccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaattttaacc 413  Q
    |||||||||| |||||| ||| ||||||||||| |||||||||||||| ||  ||||||||  ||||||||||    
T  21074267 ccccaaatgtatatggtggaccaacattatagatagtccaccatagaccttattaattttttcaattttaacc 21074195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 35370939 - 35370977
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaa 276  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  35370939 taatttcatgttttcattttgatcccacaattaataaaa 35370977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 322
Target Start/End: Complemental strand, 42686241 - 42686151
Alignment:
Q  232 cttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatc 322  Q
    |||||||||||  | ||||| |||||||||| ||||||||||||||   ||||| ||||||||| |||||  || ||||| ||||||||||    
T  42686241 cttaaataattctatgtttttattttgatcctacaattaataaaacaggcattttagtccctcacttttttctctgtttgtcaaataaatc 42686151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 12105288 - 12105353
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaa 275  Q
    ||||||||| || |||||||  || |||||||||||||||||||| |||  |||||||||||||||    
T  12105288 ggcttatttaattcaatggttcctcaaataatttcaagttttcatattggccccacaattaataaa 12105353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 35372248 - 35372163
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatcc 323  Q
    |||||||| |||||||||||| || ||||||||||||||    | ||| |||||||||  ||||| || |||||||||||||||||    
T  35372248 taatttcatgttttcattttggtctcacaattaataaaaatggcgttttagtccctcaccttttcctctgtttgccaaataaatcc 35372163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 8795938 - 8795990
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcc 262  Q
    |||||||| |||||| || || | |||||||||||||||||||||||||||||    
T  8795938 ggcttattagatccattgatcccctaaataatttcaagttttcattttgatcc 8795990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 26887645 - 26887562
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaat 321  Q
    |||||||| |||||||||||  |||||||||||||||||    || || |||||||||| ||||| || |||| ||||||||||    
T  26887645 taatttcatgttttcatttttgtcccacaattaataaaaatggcaatttagtccctcatcttttcctctgtttcccaaataaat 26887562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 53614363 - 53614278
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatcc 323  Q
    |||||||  ||||| |||||| ||||||||||||||||||   | ||| |||||||||  ||||| ||  ||||||||||||||||    
T  53614363 taatttcttgtttttattttggtcccacaattaataaaactggcgttttagtccctcacattttcctctatttgccaaataaatcc 53614278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 12106629 - 12106685
Alignment:
Q  267 attaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatcc 323  Q
    |||||||||||||||||||  |||||||| |||||  |||||||  |||||||||||    
T  12106629 attaataaaacgtacattttggtccctcacttttttctccgtttatcaaataaatcc 12106685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 20286685 - 20286725
Alignment:
Q  348 tgtctatggttgactaacattatagagagtccaccatagac 388  Q
    |||||||||| ||| ||||||||||| ||||||||||||||    
T  20286685 tgtctatggtggaccaacattatagatagtccaccatagac 20286725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 20335384 - 20335424
Alignment:
Q  348 tgtctatggttgactaacattatagagagtccaccatagac 388  Q
    |||||||||| ||| ||||||||||| ||||||||||||||    
T  20335384 tgtctatggtggaccaacattatagatagtccaccatagac 20335424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 5e-45; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 344 - 492
Target Start/End: Complemental strand, 7161307 - 7161159
Alignment:
Q  344 caaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaattttaaccattagatctttgcccaaaaaagaacaccgt 443  Q
    ||||||||||| || ||| ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| | || |||||||||||||    
T  7161307 caaatgtctattgtggaccaacattatagatagtccaccatagaccttaataatttttaaaattttaaccattagatcttttctcataaaagaacaccgt 7161208  T
Q  444 atgatcatgcatatctattgtattttacggtgaagcaacaagacctaat 492  Q
    |||||||||||| |||||||| ||||| ||||||||| ||| |||||||    
T  7161207 atgatcatgcatgtctattgtgttttatggtgaagcagcaacacctaat 7161159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 210 - 357
Target Start/End: Complemental strand, 15072908 - 15072761
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| ||||||||   ||| ||||||||||||||||||||| ||||||||||||||||||||||||||  |||||| |||||||| ||||||    
T  15072908 ggcttatttgattcaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtacattttggtcccttattttttcctccgtt 15072809  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    |||||||||||||| || |||||||  |||||| ||||||||||||||    
T  15072808 tgccaaataaatccatgtctgttaactttaacctcaaatgtctatggt 15072761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 210 - 424
Target Start/End: Original strand, 14470854 - 14471068
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||  || ||||||||| |||||| | ||||    
T  14470854 ggcttatttgatccaatggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacggttaagtccctcactttttccttcgtt 14470953  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagag-agtccaccatagactttgataatttttaaaattt 408  Q
    |||||||||||||| |   ||||||  ||||||||||| |||||| || ||| ||| ||| ||||  |||||||||| ||||   |||||||| ||||||    
T  14470954 tgccaaataaatccttcggtgttaagtttaaccccaaacgtctatagtggaccaacctta-agagtggtccaccataaacttcattaattttttaaattt 14471052  T
Q  409 taaccattagatcttt 424  Q
    | ||| || |||||||    
T  14471053 tgaccgtttgatcttt 14471068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 210 - 413
Target Start/End: Complemental strand, 14477909 - 14477706
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||| | |||||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||||| |||||  ||||||    
T  14477909 ggcttatttgatccaatggtcccataaataattttaagttttcactttgatcccacaattaataaaacgtacgtttaagtccctcacttttttctccgtt 14477810  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagag-agtccaccatagactttgataatttttaaaattt 408  Q
    |||||||||||||| |   ||||||  ||||| | ||||||||||||| ||  ||  ||| ||||  |||||||||||||||   |||||||| ||||||    
T  14477809 tgccaaataaatccttcgatgttaagtttaactctaaatgtctatggtagatcaatctta-agagttgtccaccatagacttcattaattttttaaattt 14477711  T
Q  409 taacc 413  Q
    |||||    
T  14477710 taacc 14477706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 210 - 334
Target Start/End: Complemental strand, 46111606 - 46111483
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||| |||  || |||||||||||| | ||||    
T  46111606 ggcttatttgattcaatggtcccttaaataatttcaagtttttattttggtcccacaattaataaaacgtaccttttggttcctcattttttccttcgtt 46111507  T
Q  310 tgccaaataaatccctgactgttaa 334  Q
    ||||||||||||||| |||||||||    
T  46111506 tgccaaataaatccc-gactgttaa 46111483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 357
Target Start/End: Complemental strand, 35943563 - 35943418
Alignment:
Q  212 cttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttg 311  Q
    ||||||||||  ||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||  || ||||| |||||| | ||||||    
T  35943563 cttatttgatttaatggtctcttaaataatttcaaatttttattttggtcccacaattaataaaacgtacattttggt-cctcactttttccttcgtttg 35943465  T
Q  312 ccaaataaat-ccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    |||||||||| ||||| |||||||  ||||||| |||||||||||||    
T  35943464 ccaaataaatcccctggctgttaagtttaaccctaaatgtctatggt 35943418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 210 - 372
Target Start/End: Complemental strand, 52628991 - 52628830
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||| |  |||| |||||||||||||||||||| |||||| |||||||||||||||||||||| |||  ||||||||||||||| ||||||    
T  52628991 ggcttatttgatctatcggtcccttaaataatttcaagttttaattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtt 52628892  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatag 372  Q
    ||||||||||||| |  || |||||  |||||||||||| | || ||| ||| ||||||||||    
T  52628891 tgccaaataaatctc-aaccgttaagtttaaccccaaatatgtaaggtggaccaacattatag 52628830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 50444816 - 50444703
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| |||||||| || |||||||||||| ||||||||||  ||||||||||||||||||||||||||  ||||||||||||||| |||| |    
T  50444816 ggcttatttgattcaatggtccctcaaataatttcaaattttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccgat 50444717  T
Q  310 tgccaaataaatcc 323  Q
    ||||||||||||||    
T  50444716 tgccaaataaatcc 50444703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 210 - 349
Target Start/End: Complemental strand, 45585127 - 45584989
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||| ||| || |||||||||||||||||||||||| || ||||||||||||||||||| |||  |||| ||| |||||| ||||||    
T  45585127 ggcttatttgatccaatagtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccttcactttttcctccgtt 45585028  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    |||||||||||| |||||| |||||  |||| ||||||||    
T  45585027 tgccaaataaat-cctgaccgttaagtttaaacccaaatg 45584989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 357
Target Start/End: Original strand, 16123309 - 16123432
Alignment:
Q  234 taaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgtta 333  Q
    |||||||||| |||||||||||||| | |||||||||||||||   || ||| ||||||||||||||||||||||||||||||||||||||||  |||||    
T  16123309 taaataatttaaagttttcattttggttccacaattaataaaattcacgttttagtccctcattttttcttccgtttgccaaataaatccctggttgtta 16123408  T
Q  334 aaattaaccccaaatgtctatggt 357  Q
    |  |||| | ||||||||||||||    
T  16123409 agtttaatctcaaatgtctatggt 16123432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 199 - 322
Target Start/End: Original strand, 41872563 - 41872686
Alignment:
Q  199 aataaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattt 298  Q
    |||||||||  ||||||||||||| ||||||| ||| | ||||||||| ||||||||||||||  |||||||||||||||||| ||| |||| |||| ||    
T  41872563 aataaaataaaggcttatttgatctaatggtcccttgattaatttcaacttttcattttgatcatacaattaataaaacgtacgtttaagtctctcactt 41872662  T
Q  299 tttcttccgtttgccaaataaatc 322  Q
    |||| |||||||||||||||||||    
T  41872663 tttcctccgtttgccaaataaatc 41872686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 324
Target Start/End: Original strand, 27814285 - 27814404
Alignment:
Q  205 atatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttctt 304  Q
    |||| |||||||||| ||||||  || || |||||||||||||||||||||||  ||| | |||||||||||||||| |||  ||||||||||||||| |    
T  27814285 atattggcttatttgttccaatcatccctcaaataatttcaagttttcattttagtcctataattaataaaacgtaccttttggtccctcattttttcct 27814384  T
Q  305 ccgtttgccaaataaatccc 324  Q
    | ||||||||||||||||||    
T  27814385 ctgtttgccaaataaatccc 27814404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 210 - 316
Target Start/End: Complemental strand, 34352074 - 34351968
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||||||||||| |||| |||  |||||||| |||||| | ||||    
T  34352074 ggcttatttgatccaatagtcccttaaataattttaagttttcattttggtcccacaattaataaaatgtaccttttggtccctcactttttcctacgtt 34351975  T
Q  310 tgccaaa 316  Q
    || ||||    
T  34351974 tgtcaaa 34351968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 15071340 - 15071453
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||| ||||| ||||| | ||||||||||||||||||||||||| || || |||||||||||||||  |||  |||||||| |||||| ||||||    
T  15071340 ggcttatttaatccattggtcccctaaataatttcaagttttcattttggtcacataattaataaaacgtatgttttggtccctcactttttcctccgtt 15071439  T
Q  310 tgccaaataaatcc 323  Q
    | ||||||||||||    
T  15071440 taccaaataaatcc 15071453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 52627513 - 52627625
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaat-aaaacgtacatttgagtccctcattttttcttccgt 308  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| ||||| |||||||  | || | | |||||| |||||    
T  52627513 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaaacatacattttggacctttaatttttcctccgt 52627612  T
Q  309 ttgccaaataaat 321  Q
    |||||||| ||||    
T  52627613 ttgccaaaaaaat 52627625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 44278439 - 44278354
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatcc 323  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| |||  ||||||||||||||  ||||||||||||||| ||||    
T  44278439 taatttcaagttttcattttggtcccacgattaataaaacgtacgttttggtccctcatttttttctccgtttgccaaatagatcc 44278354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 226 - 355
Target Start/End: Complemental strand, 51042444 - 51042316
Alignment:
Q  226 tggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    ||||| ||||| ||||||| | ||||||||||| ||||||||||||||||||  || ||| |||||||| ||||||| |||||||||||||||||| | |    
T  51042444 tggtcccttaattaatttccaattttcattttggtcccacaattaataaaactcacgttttagtccctctttttttc-tccgtttgccaaataaattcat 51042346  T
Q  326 gactgttaaaattaaccccaaatgtctatg 355  Q
    ||| |||||   ||||| ||||||||||||    
T  51042345 gaccgttaagtataacctcaaatgtctatg 51042316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 200 - 391
Target Start/End: Original strand, 23091339 - 23091531
Alignment:
Q  200 ataaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcatttt 299  Q
    ||||||||  ||||||||||||| | ||||| | ||| ||||||||  ||||||||||| |   |||||||||||||||||| |||  ||| |||| |||    
T  23091339 ataaaataaaggcttatttgatctattggtcccctaactaatttcacattttcattttggttttacaattaataaaacgtacgttttggtcactcacttt 23091438  T
Q  300 ttcttccgtttgccaaataaatccct-gactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagacttt 391  Q
    ||  |||||||||||||||||||||| | |||||||  |||| | |||||||||||||| ||| ||| ||| |    ||||||||||||||||    
T  23091439 tttctccgtttgccaaataaatccctagtctgttaagtttaatctcaaatgtctatggtggaccaactttaaaagtggtccaccatagacttt 23091531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 373
Target Start/End: Complemental strand, 24499749 - 24499611
Alignment:
Q  234 taaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgtta 333  Q
    ||||||||||||||||||||||||| || |||||||||||||||  || |||  |||||||| |||||| ||||||| ||||||||||||  | |||| |    
T  24499749 taaataatttcaagttttcattttggtctcacaattaataaaactcacgttttggtccctcactttttcctccgtttaccaaataaatccg-gtctgtca 24499651  T
Q  334 aaattaaccccaaatgtctatggttgactaacattataga 373  Q
    |  |||| | ||||||||||| || ||| |||||||||||    
T  24499650 actttaaactcaaatgtctattgtggaccaacattataga 24499611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 238 - 357
Target Start/End: Complemental strand, 49802985 - 49802867
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||| |||||||||||||||||   || ||| |||||||||| ||||  ||||||||||||||||||||| ||| |||||  |    
T  49802985 taatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccctcatctttttctccgtttgccaaataaatccc-gacggttaactt 49802887  T
Q  338 taaccccaaatgtctatggt 357  Q
     ||| | |||||||||||||    
T  49802886 caactctaaatgtctatggt 49802867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 33369313 - 33369247
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaa 276  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||||| ||||| |||||||||||    
T  33369313 ggcttatttgatccaatggtctcctaattaatttcaagtattcattttggtcccataattaataaaa 33369247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 226 - 355
Target Start/End: Original strand, 16963848 - 16963976
Alignment:
Q  226 tggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    |||||| |||| |||||||| |||||||||||| |||||||||||||||||      ||| |||||||||| ||||| ||||||||||||||||||  ||    
T  16963848 tggtcttttaattaatttcatgttttcattttggtcccacaattaataaaaatggtgttttagtccctcatcttttcctccgtttgccaaataaat-gct 16963946  T
Q  326 gactgttaaaattaaccccaaatgtctatg 355  Q
    |||||||||  ||||| | |||||| ||||    
T  16963947 gactgttaactttaactctaaatgtttatg 16963976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 369
Target Start/End: Original strand, 46467167 - 46467303
Alignment:
Q  233 ttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgtt 332  Q
    |||| ||||||||||||||||||||| ||||| || |||||||||  |  |||  ||||||||  ||| | |||||||| |||||||||||||  |||||    
T  46467167 ttaattaatttcaagttttcattttggtcccataactaataaaactcatgtttcggtccctcaggtttgcctccgtttgtcaaataaatccctcgctgtt 46467266  T
Q  333 aaaattaaccccaaatgtctatggttgactaacatta 369  Q
    ||  ||||||  ||||||||||||| ||| |||||||    
T  46467267 aagtttaaccataaatgtctatggtggaccaacatta 46467303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 238 - 333
Target Start/End: Complemental strand, 15234131 - 15234037
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgtta 333  Q
    |||||||| |||||||||||| |||||||||||||||||    | ||| |||||||||  ||||| ||||||||||||||||||||| ||||||||    
T  15234131 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatccc-gactgtta 15234037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 210 - 424
Target Start/End: Complemental strand, 41874089 - 41873875
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||| |||||| ||||| || || ||||||| | ||||||| ||| || || ||||||||||| |||  |||  | || | |  ||||| ||||||    
T  41874089 ggcttattagatccattggtccctcaattaatttccatttttcatcttggtctcataattaataaaaagtatcttttggccctttagcttttcctccgtt 41873990  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagag-agtccaccatagactttgataatttttaaaattt 408  Q
    | |||||||||||| ||  ||||||  |||||| |||||||||||||| ||| ||| ||| ||||  |||||||||||||||   |||||||| ||||||    
T  41873989 taccaaataaatccttggttgttaagtttaaccacaaatgtctatggtggaccaacctta-agagtggtccaccatagacttcattaattttttaaattt 41873891  T
Q  409 taaccattagatcttt 424  Q
    ||||| || |||||||    
T  41873890 taaccgtttgatcttt 41873875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 334
Target Start/End: Original strand, 50442628 - 50442746
Alignment:
Q  216 tttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaa 315  Q
    ||||||||||| ||| || ||||||||| | ||||| |||||| || |||||||||||||||||||||||   | |||||  ||||| || ||||| |||    
T  50442628 tttgatccaattgtccctcaaataattttatgtttttattttggtctcacaattaataaaacgtacattttgattcctcaccttttcctctgtttgtcaa 50442727  T
Q  316 ataaatccctgactgttaa 334  Q
    |||||||  ||||||||||    
T  50442728 ataaatctttgactgttaa 50442746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 401
Target Start/End: Complemental strand, 19466199 - 19466135
Alignment:
Q  337 ttaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataattttt 401  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||||||||| ||  ||||||||    
T  19466199 ttaacctcaaatgtctatggtggactaacattatagatagtccaccatagaccttattaattttt 19466135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 385
Target Start/End: Original strand, 44276148 - 44276294
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    ||||||| | ||||||||||| || || |||||||||||||||| |||   ||| ||| |||||  || ||||| ||| ||||||| ||||||||||  |    
T  44276148 taatttccatttttcattttggtctcataattaataaaacgtacgttttgatccttcacttttttctctgtttgtcaattaaatcc-tgactgttaagtt 44276246  T
Q  338 taaccccaaatgtctatggttgactaacattatagagagtccaccata 385  Q
    ||||| ||||||  |||||| ||| ||||||||| | |||||||||||    
T  44276247 taaccacaaatgcgtatggtggaccaacattatatatagtccaccata 44276294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 422
Target Start/End: Original strand, 36509933 - 36510017
Alignment:
Q  337 ttaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaattttaaccattagatct 422  Q
    |||||| |||||||||||||| ||||||||||||||| | |||||||||||| ||  ||||||||  ||||||| ||||| |||||    
T  36509933 ttaacctcaaatgtctatggtggactaacattatagatattccaccatagaccttattaattttt-taattttagccatttgatct 36510017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 357
Target Start/End: Complemental strand, 44999499 - 44999433
Alignment:
Q  291 cctcattttttcttccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    |||||||||||| || |||||||||||||||||||  |||||||  ||||||  |||||||||||||    
T  44999499 cctcattttttcctctgtttgccaaataaatccctagctgttaactttaaccttaaatgtctatggt 44999433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 15232778 - 15232862
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatc 322  Q
    |||||||| |||||||||||| ||||| |||||||||||    | ||| |||||||||  ||||| || ||||||||||||||||    
T  15232778 taatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgtttgccaaataaatc 15232862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 30535653 - 30535609
Alignment:
Q  344 caaatgtctatggttgactaacattatagagagtccaccatagac 388  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||||    
T  30535653 caaatgtctatggtggaccaacattatagatagtccaccatagac 30535609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 42244652 - 42244696
Alignment:
Q  233 ttaaataatttcaagttttcattttgatcccacaattaataaaac 277  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||    
T  42244652 ttaattaatttcaaattttcattttgatcccataattaataaaac 42244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 16965207 - 16965134
Alignment:
Q  248 ttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaat 321  Q
    ||||||||||| |||||||||||||||||   || ||| ||||||| |  |||||||||||||  |||||||||    
T  16965207 ttttcattttggtcccacaattaataaaaatgacgttttagtcccttacattttcttccgtttatcaaataaat 16965134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 3e-43; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 210 - 335
Target Start/End: Complemental strand, 6452629 - 6452504
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  6452629 ggcttatttgatccattggtcccctaaataatttcaagttttcattttggtcccataattaataaaacgtacgtttgagtccctcattttttcctccgtt 6452530  T
Q  310 tgccaaataaatccctgactgttaaa 335  Q
    |||||||||||||| |||| ||||||    
T  6452529 tgccaaataaatccttgaccgttaaa 6452504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 210 - 354
Target Start/End: Original strand, 232174 - 232316
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||| | |||||| ||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||  || ||| ||||||||| |||||| ||||||    
T  232174 ggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaac--acgttttagtccctcactttttcctccgtt 232271  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctat 354  Q
    |||||||||||||||  ||||||||  ||||| | ||||||||||    
T  232272 tgccaaataaatcccaaactgttaactttaactctaaatgtctat 232316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 6452282 - 6452395
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||| |||||  |||| | ||||||||||||||||||| ||||| ||| | ||||||||||| |||| ||| ||||||||| |||||| ||||||    
T  6452282 ggcttatttaatccatcggtcccctaaataatttcaagttttcgttttggtcctataattaataaaaggtacgttttagtccctcactttttcctccgtt 6452381  T
Q  310 tgccaaataaatcc 323  Q
    ||||||||||||||    
T  6452382 tgccaaataaatcc 6452395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 27080925 - 27081034
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgc 312  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||| ||  |||||||||||||  ||||||| ||||||||| |||||  |||||||||    
T  27080925 ttatttgatccaatgatcccttaaataatttcgagttttcattttggtcttacaattaataaaatttacatttaagtccctcacttttttctccgtttgc 27081024  T
Q  313 caaataaatc 322  Q
     |||||||||    
T  27081025 gaaataaatc 27081034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 210 - 319
Target Start/End: Complemental strand, 34024181 - 34024073
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||||||||| | ||| |||||||||||| ||||||||||| ||||||||||||||||| ||||||||   ||||||| |||||| ||||||    
T  34024181 ggcttatttgatccaatgat-tctcaaataatttcaaattttcattttggtcccacaattaataaaatgtacattttgatccctcactttttcctccgtt 34024083  T
Q  310 tgccaaataa 319  Q
    || |||||||    
T  34024082 tgtcaaataa 34024073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 211 - 357
Target Start/End: Original strand, 7310275 - 7310420
Alignment:
Q  211 gcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgttt 310  Q
    ||||||||||||||  ||||  ||||||||||| |||||||||||||| ||||| |||||||||||||||  ||| ||||| |||  ||||  |||||||    
T  7310275 gcttatttgatccatcggtcctttaaataattttaagttttcattttggtcccataattaataaaacgtatgtttaagtccttcaggtttttctccgttt 7310374  T
Q  311 gccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
     ||||||||||| | | |||||||  ||||| |||||||||||||||    
T  7310375 accaaataaatctc-ggctgttaagtttaactccaaatgtctatggt 7310420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 7311842 - 7311730
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||| || |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| |||  |||||| | |||||  ||  ||    
T  7311842 ggcttatttaattcaatggtcccttaaataattttaagttttcattttgatcccacaattaat-aaacgtaccttttggtcccttacttttttatctatt 7311744  T
Q  310 tgccaaataaatcc 323  Q
    ||||||||||||||    
T  7311743 tgccaaataaatcc 7311730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 210 - 308
Target Start/End: Original strand, 34023884 - 34023982
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgt 308  Q
    ||||||||||||| ||||||| || ||||||||| |||||||||||||| | |||||||||||||||||||| |||  ||||||||  ||||| |||||    
T  34023884 ggcttatttgatcaaatggtccctcaaataattttaagttttcattttggtaccacaattaataaaacgtaccttttggtccctcaccttttcctccgt 34023982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 238 - 357
Target Start/End: Complemental strand, 23397444 - 23397326
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||  |||||||||||| |||||||||||||||||    | ||| |||||||||  ||||| ||||||||||||||||||||| ||| |||||| |    
T  23397444 taatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccc-gaccgttaaatt 23397346  T
Q  338 taaccccaaatgtctatggt 357  Q
    ||||  ||||||||||||||    
T  23397345 taacttcaaatgtctatggt 23397326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 238 - 357
Target Start/End: Complemental strand, 32507116 - 32506997
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||||||||||| |||||||||      ||| |||||||||  ||||  || ||||||||||||||||| ||||||||||  |    
T  32507116 taatttcatgttttcattttgatcccacatttaataaaaatggtgttttagtccctcacatttttctcagtttgccaaataaatccttgactgttaagtt 32507017  T
Q  338 taaccccaaatgtctatggt 357  Q
    ||||||||||| ||||||||    
T  32507016 taaccccaaatatctatggt 32506997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 27967165 - 27967055
Alignment:
Q  212 cttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttg 311  Q
    ||||||||||||||||||| |  |||||||| | |||||||||||||||||||||||||||| ||| |||||||   ||| | | |||||| | ||||||    
T  27967165 cttatttgatccaatggtcccccaaataattcctagttttcattttgatcccacaattaatagaacatacattttgatcctttaatttttcctacgtttg 27967066  T
Q  312 ccaaataaatc 322  Q
    ||||| |||||    
T  27967065 ccaaaaaaatc 27967055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 197 - 321
Target Start/End: Complemental strand, 15730161 - 15730036
Alignment:
Q  197 ataataaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaat-aaaacgtacatttgagtccctca 295  Q
    ||||| |||||  |||||||| ||| || ||||| || || ||||||| | ||||||||||| ||||||||||||| ||||  |||||||  ||||||||    
T  15730161 ataattaaataaaggcttattagattcattggtccctcaattaatttccatttttcattttggtcccacaattaataaaaaaatacattttggtccctca 15730062  T
Q  296 ttttttcttccgtttgccaaataaat 321  Q
     |||||||||||||||| ||||||||    
T  15730061 ctttttcttccgtttgctaaataaat 15730036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 238 - 325
Target Start/End: Original strand, 2687256 - 2687343
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    |||||||| ||||||||||||||||||||||||||||||    | ||| ||||| |||  ||||| ||||||||||||||||||||||    
T  2687256 taatttcatgttttcattttgatcccacaattaataaaaatggcgttttagtccttcacattttcctccgtttgccaaataaatccct 2687343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 304
Target Start/End: Complemental strand, 233659 - 233588
Alignment:
Q  233 ttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttctt 304  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||   || ||| ||||||||||||||||||    
T  233659 ttaaataatttcaatttttcattttggtcccataattaataaaaaacacgttttagtccctcattttttctt 233588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 357
Target Start/End: Original strand, 5186594 - 5186712
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||| || ||||||||||||||   || ||| | ||| |||| ||||| ||||||||||||||||||||| ||| |||||  |    
T  5186594 taatttcatgttttcattttggtcacacaattaataaaagtgacgttttaatccatcatcttttcctccgtttgccaaataaatccc-gaccgttaactt 5186692  T
Q  338 taaccccaaatgtctatggt 357  Q
    ||||  ||||| ||||||||    
T  5186693 taacttcaaatatctatggt 5186712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 357
Target Start/End: Original strand, 12669745 - 12669868
Alignment:
Q  234 taaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgtta 333  Q
    |||||||| | || |||| |||||| || |||||||||||||||  |  ||| ||||| ||| |||||| ||||||||| ||||||||| || |||||||    
T  12669745 taaataatattaaatttttattttggtctcacaattaataaaactcaagttttagtccgtcactttttcctccgtttgctaaataaatctctaactgtta 12669844  T
Q  334 aaattaaccccaaatgtctatggt 357  Q
    |  |||||| ||||||| ||||||    
T  12669845 actttaacctcaaatgtgtatggt 12669868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 349
Target Start/End: Original strand, 23392240 - 23392350
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||  |||||||||||| |||||||||||||||||    | ||| |||||||||  ||||| |||||||||||||||||| ||| | ||||||  |    
T  23392240 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat-cctaaatgttaagtt 23392338  T
Q  338 taaccccaaatg 349  Q
    ||||||||||||    
T  23392339 taaccccaaatg 23392350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 357
Target Start/End: Original strand, 29380217 - 29380335
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||  |||||||||||| |||||||||||| ||||    | ||| |||||||||  ||||||||||||||||||||||||||| ||| |||||  |    
T  29380217 taatttcttgttttcattttggtcccacaattaacaaaaatggcgttttagtccctcaccttttcttccgtttgccaaataaatccc-gaccgttaattt 29380315  T
Q  338 taaccccaaatgtctatggt 357  Q
    ||||  ||||||| ||||||    
T  29380316 taacttcaaatgtatatggt 29380335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 29381810 - 29381735
Alignment:
Q  248 ttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatcc 323  Q
    |||||||||||||||||||||||||||||   || ||| ||||| |||| ||||| ||||||| ||||||||||||    
T  29381810 ttttcattttgatcccacaattaataaaaatgacgttttagtccttcatcttttcctccgtttaccaaataaatcc 29381735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 17839229 - 17839143
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccc 324  Q
    |||||||  |||||||||||| |||||||||||||||||    | ||| |||||||||  ||||| |||||||||||||||||||||    
T  17839229 taatttcttgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccc 17839143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 6701406 - 6701490
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatc 322  Q
    ||||||||  ||||||||||| |||||||||||||||||     |||| |||||||||  ||||| |||||||||||||||||||    
T  6701406 taatttcatattttcattttggtcccacaattaataaaaatggtattttagtccctcacattttcctccgtttgccaaataaatc 6701490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 17837651 - 17837727
Alignment:
Q  247 gttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatcc 323  Q
    |||||||||||| | |||||||||||||||    | ||| |||||||||| ||||||||||||| ||||||||||||    
T  17837651 gttttcattttggttccacaattaataaaaatggcgttttagtccctcatcttttcttccgtttaccaaataaatcc 17837727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 302
Target Start/End: Complemental strand, 27082261 - 27082170
Alignment:
Q  212 cttatttgatccaatggtctct-taaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttc 302  Q
    |||||| |||||||||||| |  | ||||||||| | ||||||||||| ||||||||||||||||| |||  ||| ||||||||| ||||||    
T  27082261 cttattcgatccaatggtccccctgaataatttcgaattttcattttggtcccacaattaataaaaagtatgtttaagtccctcactttttc 27082170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 373
Target Start/End: Original strand, 29722689 - 29722823
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||||||||| |||||||||||    | ||| |||||||||  ||||| ||| |||  |||||||||| |  ||||||||| |    
T  29722689 taatttcatgttttcattttgatcccataattaataaaaatggcgttttagtccctcacattttcctccattttgcaaataaatctc-aactgttaaatt 29722787  T
Q  338 taaccccaaatgtctatggttgactaacattataga 373  Q
    ||| || |||||| ||| || ||| |||||||||||    
T  29722788 taatccaaaatgtatattgtggaccaacattataga 29722823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 2688014 - 2687924
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgac 328  Q
    |||||||| |||||||||||  |||||||||||||||||    | ||| |||||||||  ||||  |||||||||||||||||||| ||||    
T  2688014 taatttcatgttttcattttagtcccacaattaataaaaatggcgttttagtccctcacctttttatccgtttgccaaataaatccatgac 2687924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 388
Target Start/End: Original strand, 15728855 - 15728906
Alignment:
Q  337 ttaaccccaaatgtctatggttgactaacattatagagagtccaccatagac 388  Q
    |||||| ||||| |||||||| ||| ||||||||||| ||||||||||||||    
T  15728855 ttaacctcaaatatctatggtggaccaacattatagatagtccaccatagac 15728906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 5e-42; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 201 - 388
Target Start/End: Original strand, 42871084 - 42871270
Alignment:
Q  201 taaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttt 300  Q
    |||||||  ||||||||||||||||||||| | | | ||||||||| |||||||||||||||||||||||||||||||||| |||  |||||||| ||||    
T  42871084 taaaataaaggcttatttgatccaatggtcccctgattaatttcaaattttcattttgatcccacaattaataaaacgtacgttttggtccctcactttt 42871183  T
Q  301 tcttccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagac 388  Q
    || |||||||||||||||||| ||||||||||||  ||||  ||||||||||| ||| ||  ||||||||| | |||||||| |||||    
T  42871184 tcctccgtttgccaaataaat-cctgactgttaagtttaattccaaatgtctacggtggatcaacattatatatagtccaccgtagac 42871270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 390215 - 390361
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| || ||||| | ||||||||||||||||||||||||| ||||||||||||||||||||| ||||  ||||||||||| ||| ||||||    
T  390215 ggcttatttgattcattggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcatttcttcctccgtt 390314  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    |||||||||||| ||||||||||||  |||||| ||||||||| ||||    
T  390315 tgccaaataaat-cctgactgttaagtttaacctcaaatgtctgtggt 390361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 210 - 324
Target Start/End: Original strand, 1188841 - 1188955
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||| ||| || ||||||||||||||||| |||||| ||||||||||||||||||||||||||  |||||||| |||||| ||||||    
T  1188841 ggcttatttgatccaatagtccctcaaataatttcaagtttttattttggtcccacaattaataaaacgtacattttggtccctcactttttcctccgtt 1188940  T
Q  310 tgccaaataaatccc 324  Q
    |||||||||||||||    
T  1188941 tgccaaataaatccc 1188955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 210 - 349
Target Start/End: Complemental strand, 2312600 - 2312462
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| ||||| |||| |||||||||||||| ||||||  |||||||||||||||||||||| ||| ||||||||| |||||| ||||||    
T  2312600 ggcttatttgatccattggtcccttagataatttcaagtttccattttagtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgtt 2312501  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    |||||||||||| | |||| |||||  |||||||||||||    
T  2312500 tgccaaataaat-catgaccgttaagtttaaccccaaatg 2312462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 212 - 323
Target Start/End: Complemental strand, 42810319 - 42810208
Alignment:
Q  212 cttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttg 311  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||||||| |||||||||||||||||||||| ||| |||||||||  ||||| ||||||||    
T  42810319 cttatttgatccaatagtcccttaaataatttcaacttttcattttggtcccacaattaataaaacgtacttttaagtccctcacattttcctccgtttg 42810220  T
Q  312 ccaaataaatcc 323  Q
    ||||||||||||    
T  42810219 ccaaataaatcc 42810208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 235 - 424
Target Start/End: Original strand, 27847701 - 27847888
Alignment:
Q  235 aaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaa 334  Q
    ||||||||||||||||| |||||| ||||||||||||||||| |||  |||  |||||| | ||||||||||||||||||||||||| || ||| |||||    
T  27847701 aaataatttcaagtttttattttggtcccacaattaataaaatgtatttttcggtcccttaatttttcttccgtttgccaaataaat-ccagacggttaa 27847799  T
Q  335 aattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaattttaaccattagatcttt 424  Q
      |||||||||||||| |||||| | | || |||||||| |||||||||||||| ||  ||||||||  |||||||||| || |||||||    
T  27847800 gtttaaccccaaatgtatatggtgggccaagattatagatagtccaccatagaccttattaattttt-caattttaaccctttgatcttt 27847888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 210 - 325
Target Start/End: Complemental strand, 1831381 - 1831266
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||| ||| ||    
T  1831381 ggcttatttgatccaatggtccctcaattaatttcaagttttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccatt 1831282  T
Q  310 tgccaaataaatccct 325  Q
    |  |||||||||||||    
T  1831281 tttcaaataaatccct 1831266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 24426337 - 24426448
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| || ||||||||||||||||||| |||  |||||||| |||||| ||||||    
T  24426337 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccctcactttttcctccgtt 24426436  T
Q  310 tgccaaataaat 321  Q
    ||||||| ||||    
T  24426437 tgccaaaaaaat 24426448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 210 - 324
Target Start/End: Original strand, 4128991 - 4129105
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||| ||||||||||||||||| ||||||||  |||||| | |||||  ||||||    
T  4128991 ggcttatttgatccaatggttcctcaaataatttcaagttttcattttggtcccacaattaataaaatgtacattttggtcccttacttttttctccgtt 4129090  T
Q  310 tgccaaataaatccc 324  Q
    |||||||||||||||    
T  4129091 tgccaaataaatccc 4129105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 210 - 334
Target Start/End: Complemental strand, 393756 - 393632
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||||||| |||| || |||||||||||| ||||||||||| ||||||||||||||||| |||  |||  |||||||| |||||  ||||||    
T  393756 ggcttatttgatccaacggtccctcaaataatttcaaattttcattttggtcccacaattaataaaaagtatcttttggtccctcacttttttctccgtt 393657  T
Q  310 tgccaaataaatccctgactgttaa 334  Q
    ||||||||||||||| |||||||||    
T  393656 tgccaaataaatcccggactgttaa 393632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 201 - 324
Target Start/End: Original strand, 1587171 - 1587294
Alignment:
Q  201 taaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttt 300  Q
    |||||||| |||||||||||||||| |||| || ||||||||| || ||||||||||  || ||||||||||||||||||| |||  |||||||| ||||    
T  1587171 taaaatataggcttatttgatccaacggtccctcaaataattttaaattttcattttagtctcacaattaataaaacgtaccttttggtccctcactttt 1587270  T
Q  301 tcttccgtttgccaaataaatccc 324  Q
    || |||||||||||||||||||||    
T  1587271 tcctccgtttgccaaataaatccc 1587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 211 - 334
Target Start/End: Original strand, 1829752 - 1829874
Alignment:
Q  211 gcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgttt 310  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||| |||||||||||||||||||||  ||| ||||||||| |||||| | |||||    
T  1829752 gcttatttgatccaacggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttagtccctcactttttcctacgttt 1829851  T
Q  311 gccaaataaatccctgactgttaa 334  Q
    | ||||||||| || |||||||||    
T  1829852 gtcaaataaattcc-gactgttaa 1829874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 6348153 - 6348299
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||| ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||| |||  || ||||| |||||| || |||    
T  6348153 ggcttatttgatcaaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggttcctcactttttcctctgtt 6348252  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    || |||||||||  ||||  |||||  |||||| ||||||||||||||    
T  6348253 tgtcaaataaat-tctgatggttaagtttaacctcaaatgtctatggt 6348299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 214 - 349
Target Start/End: Complemental strand, 6349667 - 6349533
Alignment:
Q  214 tatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgcc 313  Q
    |||||||| |||||||| || |||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||||||  ||||||||||||| ||    
T  6349667 tatttgattcaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaccttttcttccgtttacc 6349568  T
Q  314 aaataaatccctgactgttaaaattaaccccaaatg 349  Q
    ||||| ||||| ||  |||||  |||||||||||||    
T  6349567 aaatagatccc-gaacgttaagtttaaccccaaatg 6349533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 205 - 399
Target Start/End: Complemental strand, 44503801 - 44503608
Alignment:
Q  205 atatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttctt 304  Q
    |||| |||||||||||| |||| ||| || ||||||||||||||||| |||||| || |||||||||| ||||||||||||  |||||||| |||||| |    
T  44503801 atattggcttatttgattcaatagtccctcaaataatttcaagtttttattttggtctcacaattaat-aaacgtacattttggtccctcactttttcct 44503703  T
Q  305 ccgtttgccaaataaatccctgactgttaa-aattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataattt 399  Q
    | |||||||||||||||||| ||| |||||   ||||||| |||||||||||||  || |||||| ||||  ||||||| ||||| || |||||||    
T  44503702 ctgtttgccaaataaatccc-gaccgttaacttttaaccctaaatgtctatggtgaaccaacattgtagatggtccaccgtagaccttaataattt 44503608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 210 - 424
Target Start/End: Complemental strand, 37884395 - 37884182
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| |||||||| || ||||||||| || ||||||||||  ||||| ||||||||||| |||| |||  |||| | | |||||| ||||||    
T  37884395 ggcttatttgattcaatggtccctcaaataattttaaattttcatttttgtcccataattaataaaatgtaccttttggtcctttactttttcctccgtt 37884296  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaatttt 409  Q
    |||||||||||| || |||||||||  |||||||||||| | ||||||  || || |||||| | |||||||||||||| ||  ||| ||||  ||||||    
T  37884295 tgccaaataaat-ccagactgttaagtttaaccccaaatatatatggtgaaccaatattatatatagtccaccatagaccttattaaattttccaatttt 37884197  T
Q  410 aaccattagatcttt 424  Q
    |||| || |||||||    
T  37884196 aaccctttgatcttt 37884182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 2310921 - 2311034
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||||||||||||   ||| ||||||||||||||||||||| |||||||||||||||||||||| |||  ||||||||  ||||| |||| |    
T  2310921 ggcttatttgatccaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcagattttcctccgat 2311020  T
Q  310 tgccaaataaatcc 323  Q
    ||||||||||||||    
T  2311021 tgccaaataaatcc 2311034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 37882832 - 37882944
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||  ||||||| || |||||||||||||||||||||||  |||||||||||||||||||||| |||  ||||||||  ||||| ||||||    
T  37882832 ggcttatttgatttaatggtccctcaaataatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctcaccttttcctccgtt 37882931  T
Q  310 tgccaaataaatc 322  Q
    |||||||||||||    
T  37882932 tgccaaataaatc 37882944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 27851047 - 27850952
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgt 308  Q
    |||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||| ||||  |||||||| |||||| |||||    
T  27851047 ttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgt 27850952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 238 - 382
Target Start/End: Complemental strand, 10168873 - 10168728
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||| |||||||||||||||||    | ||| |||||||||  ||||| |||||||||||||||||||| |||| |||||  |    
T  10168873 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatccatgacagttaactt 10168774  T
Q  338 taa-ccccaaatgtctatggttgactaacattatagagagtccacc 382  Q
    ||| ||||||||||||||||| ||| |||||||||||  |||||||    
T  10168773 taacccccaaatgtctatggtggaccaacattatagatggtccacc 10168728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 44501516 - 44501628
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||| ||| ||||| || ||||||||||||||||||||| || ||||| |||||||||||||||| ||| ||||||||| |||||  || |||    
T  44501516 ggcttatttgaaccattggtccctcaaataatttcaagttttcattctggtcccataattaataaaacgtacgtttaagtccctcacttttttctctgtt 44501615  T
Q  310 tgccaaataaatc 322  Q
    |||||||||||||    
T  44501616 tgccaaataaatc 44501628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 210 - 324
Target Start/End: Complemental strand, 1190310 - 1190196
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||| ||| ||||| || ||||||||| |||||||||||||| ||||| |||||||||||||||| ||| ||| ||||| |||||  || |||    
T  1190310 ggcttatttgaaccattggtccctcaaataattttaagttttcattttggtcccataattaataaaacgtacgtttaagtacctcacttttttctctgtt 1190211  T
Q  310 tgccaaataaatccc 324  Q
    |||||||||||||||    
T  1190210 tgccaaataaatccc 1190196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 208 - 350
Target Start/End: Complemental strand, 4871484 - 4871342
Alignment:
Q  208 tgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccg 307  Q
    ||||||||||||||||| ||||| |  ||||||||||| |||||||||||| | | |||||||||||||||||  ||| |||||| ||  ||||  ||||    
T  4871484 tgggcttatttgatccattggtccccaaaataatttcatgttttcattttggttctacaattaataaaacgtatgtttaagtcccccacgtttttctccg 4871385  T
Q  308 tttgccaaataaatccctgactgttaaaattaaccccaaatgt 350  Q
    |||| ||||||||||||||| ||||||  |||| |||||||||    
T  4871384 tttgtcaaataaatccctgaatgttaactttaatcccaaatgt 4871342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 1794409 - 1794522
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||||||| ||||||||||||||  ||| |||   ||||||| |||||| || |||    
T  1794409 ggcttatttgattcaatggtccctcaaataatttcaagttttcattttgatctcacaattaataaaatataccttttgatccctcactttttcctctgtt 1794508  T
Q  310 tgccaaataaatcc 323  Q
    || |||||||||||    
T  1794509 tgtcaaataaatcc 1794522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 210 - 349
Target Start/End: Complemental strand, 1588207 - 1588069
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||||   ||||| || ||||||||| |||||||||||||  ||||||||||||||||| |||| ||| | ||||||| |||||| ||||||    
T  1588207 ggcttatttgatcttttggtccctcaaataattttaagttttcattttagtcccacaattaataaaatgtacgtttaaatccctcactttttcctccgtt 1588108  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    | ||||||||||   ||||||||||  |||||||||||||    
T  1588107 taccaaataaat-tatgactgttaagtttaaccccaaatg 1588069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 52239875 - 52239986
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||| ||||||| || |||||||||||| |||| ||||||||||||||||||||||||||||| |||  || | |||  ||||  ||||||    
T  52239875 ggcttatttgatctaatggtccctcaaataatttcaaatttttattttgatcccacaattaataaaacgtacgttttggttcttcaggtttttctccgtt 52239974  T
Q  310 tgccaaataaat 321  Q
    ||||||||||||    
T  52239975 tgccaaataaat 52239986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 210 - 324
Target Start/End: Original strand, 40792749 - 40792863
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||  |||||||   ||| |||||| |||||||||||||| |||||||||||||||||| |||||||  ||||||||  ||||  ||||||    
T  40792749 ggcttatttgatttaatggtcctctaattaattttaagttttcattttggtcccacaattaataaaacatacattttggtccctcagatttttctccgtt 40792848  T
Q  310 tgccaaataaatccc 324  Q
    |||||||||||||||    
T  40792849 tgccaaataaatccc 40792863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 49344128 - 49344015
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccc-tcattttttcttccgt 308  Q
    |||||||||||||||||||||   |||||||||| ||| ||| |||||| ||||||||||||||||||||   ||| |||||| ||| |||||| |||||    
T  49344128 ggcttatttgatccaatggtcctctaaataattttaagcttttattttggtcccacaattaataaaacgtgggtttaagtcccttcactttttcctccgt 49344029  T
Q  309 ttgccaaataaatc 322  Q
    ||||||||||||||    
T  49344028 ttgccaaataaatc 49344015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 15450193 - 15450081
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| || ||||| |||||||||||||| ||||||||| |||||||  | |||||||||||||| ||| |||| || |  ||||| ||||||    
T  15450193 ggcttatttgattcattggtcccttaaataatttcaggttttcattatgatcccttagttaataaaacgtacgtttaagtcgcttaccttttcctccgtt 15450094  T
Q  310 tgccaaataaatc 322  Q
    |||||||||||||    
T  15450093 tgccaaataaatc 15450081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 357
Target Start/End: Original strand, 52963570 - 52963713
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgc 312  Q
    |||||||||| | |||||   ||||||||||||||||||||||||| || ||||||||||||| ||||  |||  ||||||||  ||||  ||||||||     
T  52963570 ttatttgatcaattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtatgttttggtccctcaagtttttctccgtttgt 52963669  T
Q  313 caaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    |||||||||| | |||||||||  ||||| |||||||||||||||    
T  52963670 caaataaatctc-gactgttaactttaactccaaatgtctatggt 52963713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 323
Target Start/End: Original strand, 31965835 - 31965946
Alignment:
Q  212 cttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttg 311  Q
    ||||||||||| |||| || | ||| |||||||||||||| ||| || ||| |||||||| |||| ||||||||  |||||||| |||||| ||||||||    
T  31965835 cttatttgatctaatgatcccctaattaatttcaagtttttattctggtcctacaattaagaaaatgtacattttggtccctcactttttcctccgtttg 31965934  T
Q  312 ccaaataaatcc 323  Q
    ||||||||||||    
T  31965935 ccaaataaatcc 31965946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 49342617 - 49342728
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||| ||||||||| ||  | | |||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||||| |||||| ||| ||    
T  49342617 ggcttatctgatccaatcgttccctgaataattttaagttttcattttgatcccacaattaataaaatgtacgtttaagtccctcactttttcctccatt 49342716  T
Q  310 tgccaaataaat 321  Q
    ||  ||||||||    
T  49342717 tgttaaataaat 49342728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 357
Target Start/End: Complemental strand, 52241245 - 52241127
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||||| |||||||||||||||||||| |||   | |||||| ||||| |||||||||||||||||| || ||| |||||  |    
T  52241245 taatttcatgttttcattttgattccacaattaataaaacgtacgttttgattcctcatcttttcctccgtttgccaaataaattcc-gaccgttaactt 52241147  T
Q  338 taaccccaaatgtctatggt 357  Q
    |||| |||||| ||||||||    
T  52241146 taactccaaatatctatggt 52241127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 210 - 424
Target Start/End: Complemental strand, 53205601 - 53205387
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| || | ||| |  |||||||||||  ||||||||||  |||||||||||| ||||    | ||| ||||||||| |||||| ||||||    
T  53205601 ggcttatttgattcattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaataggcgttttagtccctcactttttcctccgtt 53205502  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaatttt 409  Q
    |||||||||||||| ||  ||||||  |||| | |||||||||||||| ||  |||||||||||  |||| || ||||||||   ||||||   ||||||    
T  53205501 tgccaaataaatccatgggtgttaactttaatctcaaatgtctatggtggatcaacattatagatggtccgccgtagactttatcaattttgttaatttt 53205402  T
Q  410 aaccattagatcttt 424  Q
    |||| || |||||||    
T  53205401 aaccctttgatcttt 53205387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 31968510 - 31968397
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||| ||||||| |||| | ||| |||||| || ||||||||||| ||| |||||||||||||||||| |||  |||| ||| |||||| || |||    
T  31968510 ggcttattagatccaacggtcccctaattaattttaatttttcattttggtcctacaattaataaaacgtacgttttggtccttcactttttcctctgtt 31968411  T
Q  310 tgccaaataaatcc 323  Q
    ||||||||||||||    
T  31968410 tgccaaataaatcc 31968397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 357
Target Start/End: Original strand, 53432082 - 53432207
Alignment:
Q  232 cttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgt 331  Q
    ||||| ||||||||||||||||||||| ||||| || ||||||||| ||  |||  ||||||||  ||| | | |||| | |||||||||||||||| ||    
T  53432082 cttaattaatttcaagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagtttgccttcgttggtcaaataaatccctgacggt 53432181  T
Q  332 taaaattaaccccaaatgtctatggt 357  Q
    |||  |||||||||||||||||||||    
T  53432182 taagtttaaccccaaatgtctatggt 53432207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 198 - 366
Target Start/End: Complemental strand, 11438698 - 11438530
Alignment:
Q  198 taataaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcatt 297  Q
    ||||||| | |||||||||||| |||| | ||| | || ||||||| ||||||| |||||| || || ||||||||||||   | |||  |||||||| |    
T  11438698 taataaattttgggcttatttgttccattagtcccctatataatttgaagtttttattttggtctcataattaataaaacactcgttttggtccctcact 11438599  T
Q  298 ttttcttccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaaca 366  Q
    ||||| ||| ||||| ||||||||| |||||| ||||  ||||||||||||||||| ||| ||| ||||    
T  11438598 ttttcctccatttgctaaataaatctctgacttttaagtttaaccccaaatgtctacggtggaccaaca 11438530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 234 - 322
Target Start/End: Complemental strand, 54485639 - 54485551
Alignment:
Q  234 taaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatc 322  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | | |||   |||||||  ||||| |||||||||||||||||||    
T  54485639 taaataatttcaagttttcattttgatcccataattaataaaacattcgttttgatccctcaagttttcatccgtttgccaaataaatc 54485551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 238 - 325
Target Start/End: Original strand, 10167451 - 10167538
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    |||||||| |||||||||||| | |||||||||||||||  | ||||| |||||||||| ||||| |||||||| |||||||||||||    
T  10167451 taatttcatgttttcattttggtaccacaattaataaaaattgcattttagtccctcatattttcctccgtttgtcaaataaatccct 10167538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 424
Target Start/End: Complemental strand, 13533275 - 13533166
Alignment:
Q  313 caaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaattttaac 412  Q
    |||||||||||  |||||||||| |||||  |||||||||||||| ||| ||||||||||| |||||||||||||| ||  ||||||||  |||||||||    
T  13533275 caaataaatcca-gactgttaaatttaacttcaaatgtctatggtggaccaacattatagatagtccaccatagaccttattaattttt-caattttaac 13533178  T
Q  413 cattagatcttt 424  Q
    |||| |||||||    
T  13533177 catttgatcttt 13533166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 42872414 - 42872308
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgc 312  Q
    ||||||||| |||||||| | ||| ||||| | | ||||||||||| ||||| ||||||||||| |||| |||  |||||||| |||||| |||||||||    
T  42872414 ttatttgattcaatggtcccctaattaattaccatttttcattttggtcccataattaataaaatgtacgttttggtccctcactttttcctccgtttgc 42872315  T
Q  313 caaataa 319  Q
    |||||||    
T  42872314 caaataa 42872308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 233 - 373
Target Start/End: Complemental strand, 14524946 - 14524806
Alignment:
Q  233 ttaaataatttcaagtttt-cattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgt 331  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  |  ||| |||| || | |||| | ||||||||| ||| |||||||| |||||    
T  14524946 ttaattaatttcaagtttttcattttgatcccataattaataaaactcatgttttagtctcttacttttccctccgtttgcaaaa-aaatccctaactgt 14524848  T
Q  332 taaaattaaccccaaatgtctatggttgactaacattataga 373  Q
    |||  ||||||||||||||||||| | ||| || ||||||||    
T  14524847 taagtttaaccccaaatgtctatgatggaccaatattataga 14524806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 53204381 - 53204474
Alignment:
Q  232 cttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    |||||||||||| | ||||||||||||||| |||||||||||||||   | ||| ||| ||||| |||||  ||||||||||||||||||||||    
T  53204381 cttaaataatttaatgttttcattttgatctcacaattaataaaacaggcgttttagttcctcaattttttctccgtttgccaaataaatccct 53204474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 11968509 - 11968620
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||||  |||||  || |||||||||||||||||||||||| || ||||||||||||||| ||| |||  ||||||||  ||||  ||||||    
T  11968509 ggcttatttgatcttatggttcctcaaataatttcaagttttcattttggtctcacaattaataaaacatactttttggtccctcagattttgctccgtt 11968608  T
Q  310 tgccaaataaat 321  Q
    ||  ||||||||    
T  11968609 tgtaaaataaat 11968620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 238 - 356
Target Start/End: Original strand, 50546932 - 50547051
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| || ||||||||  |||||||||||||||||    | ||| |||||||||| |||||  |||||||||||||||||||||  |||||||  |    
T  50546932 taatttcatgtcttcattttagtcccacaattaataaaaatggcgttttagtccctcatcttttccaccgtttgccaaataaatccctacctgttaagtt 50547031  T
Q  338 taaccc-caaatgtctatgg 356  Q
    |||||| |||||||||||||    
T  50547032 taaccctcaaatgtctatgg 50547051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 422
Target Start/End: Original strand, 34438528 - 34438612
Alignment:
Q  337 ttaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaattttaaccattagatct 422  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||||||||| ||  ||||||||  ||||| ||||||| |||||    
T  34438528 ttaacctcaaatgtctatggtggactaacattatagatagtccaccatagaccttattaattttt-taatttcaaccatttgatct 34438612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 13166810 - 13166742
Alignment:
Q  287 agtccctcattttttcttccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtctatg 355  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||||  |||||  ||||||||||||    
T  13166810 agtccctcactttttcatccgtttgccaaataaatccttgactgttaagtttaacttcaaatgtctatg 13166742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 413
Target Start/End: Complemental strand, 5591508 - 5591363
Alignment:
Q  270 aataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttga--ctaacat 367  Q
    ||||||||  || ||| ||||||||| | |||  || ||||||||||||||||  || |||||||| |||||  |||||||||||||| ||    |||||    
T  5591508 aataaaactcacgttttagtccctcactcttttctctgtttgccaaataaatctttggctgttaaatttaacttcaaatgtctatggtagatcaaaacat 5591409  T
Q  368 tatagagagtccaccatagactttgataatttttaaaattttaacc 413  Q
    |||||| |||||||||||||| ||  ||||||||  ||||||||||    
T  5591408 tatagatagtccaccatagaccttattaatttttccaattttaacc 5591363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 413
Target Start/End: Original strand, 48126862 - 48127007
Alignment:
Q  270 aataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttga--ctaacat 367  Q
    ||||||||  || ||| ||||||||| | |||  || ||||||||||||||||  || |||||||| |||||  |||||||||||||| ||    |||||    
T  48126862 aataaaactcacgttttagtccctcactcttttctctgtttgccaaataaatctttggctgttaaatttaacttcaaatgtctatggtagatcaaaacat 48126961  T
Q  368 tatagagagtccaccatagactttgataatttttaaaattttaacc 413  Q
    |||||| |||||||||||||| ||  ||||||||  ||||||||||    
T  48126962 tatagatagtccaccatagaccttattaatttttccaattttaacc 48127007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 323
Target Start/End: Original strand, 7707614 - 7707699
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatcc 323  Q
    |||||||| |||||||||||| |||||||||||||||||   || ||| ||||| |||  ||||| || |||||||||||||||||    
T  7707614 taatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccatcacattttcctctgtttgccaaataaatcc 7707699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 424
Target Start/End: Complemental strand, 53435849 - 53435657
Alignment:
Q  232 cttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgt 331  Q
    ||||| ||||||||||||||||||||| ||||| || |||||||||  |  |||  | ||||||  ||| | |||||| | ||||||||||| |||| ||    
T  53435849 cttaattaatttcaagttttcattttggtcccataagtaataaaactcatgttttggcccctcaagtttacctccgttggtcaaataaatccttgacggt 53435750  T
Q  332 taaaattaaccccaaatgtctatggttgactaacattatagag-agtccaccatagactttgataatttttaaaattttaaccattagatcttt 424  Q
    |||  |||||   ||||||||||||| ||| ||| ||| ||||  ||||||| |||||||   |||||||| ||||||||||| || |||||||    
T  53435749 taagtttaactttaaatgtctatggtagaccaacctta-agagtggtccaccgtagacttcattaattttttaaattttaaccgtttgatcttt 53435657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 324
Target Start/End: Original strand, 23201872 - 23201958
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccc 324  Q
    |||||||| ||||| |||||| ||||||| |||||||||    |||||  ||||||||  ||||| |||||||||||||||||||||    
T  23201872 taatttcatgtttttattttggtcccacatttaataaaaatggcattttggtccctcaccttttcctccgtttgccaaataaatccc 23201958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 50548310 - 50548228
Alignment:
Q  241 tttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatcc 323  Q
    ||||| |||||||||||| ||||||||||||||| |   || ||| |||||||||  ||||| || |||||||||||||||||    
T  50548310 tttcatgttttcattttggtcccacaattaataagaataacgttttagtccctcacattttcctctgtttgccaaataaatcc 50548228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 238 - 390
Target Start/End: Original strand, 13165522 - 13165673
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||| ||||  |||||||||||    | |||  |||| |||| ||||| |||||||| ||||||||||| ||||||||||  |    
T  13165522 taatttcatgttttcattttggtccct-aattaataaaaatggcgttttcgtccttcatcttttcctccgtttgtcaaataaatccttgactgttaagtt 13165620  T
Q  338 taaccccaaatgtctatggttgactaacattatagag-agtccaccatagactt 390  Q
    ||||  ||||| |||||||| ||| ||| ||| ||||  |||||||||||||||    
T  13165621 taacttcaaatttctatggtggaccaacctta-agagtggtccaccatagactt 13165673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 55764450 - 55764406
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcatttt 257  Q
    |||||| ||||| |||||| |||||||||||||||||||||||||    
T  55764450 ttatttcatccattggtcttttaaataatttcaagttttcatttt 55764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 322
Target Start/End: Complemental strand, 33232777 - 33232703
Alignment:
Q  248 ttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatc 322  Q
    |||| |||||| |||||||||||||||||    | ||| |||||||||  ||||| |||||||||||||||||||    
T  33232777 tttttattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatc 33232703  T

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Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 55828894 - 55828850
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcatttt 257  Q
    |||||| ||||| |||||| ||||||||||||||||||| |||||    
T  55828894 ttatttcatccattggtcttttaaataatttcaagtttttatttt 55828850  T

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Target: chr2 (Bit Score: 88; Significance: 5e-42; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 43033080 - 43033226
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||| |||||| ||||||    
T  43033080 ggcttatttgatccaatgatcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtt 43033179  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    ||||||||||||||  || ||||||  |||||| ||||||||||||||    
T  43033180 tgccaaataaatcctcga-tgttaagtttaacctcaaatgtctatggt 43033226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 210 - 424
Target Start/End: Complemental strand, 28562927 - 28562714
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| |||||||| || |||||||||||| ||||||||||| ||||| |||||||||||| ||| |||  |||||||| |||||| ||||||    
T  28562927 ggcttatttgattcaatggtccctcaaataatttcaaattttcattttggtcccataattaataaaacataccttttggtccctcactttttcctccgtt 28562828  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaatttt 409  Q
    || ||||||||| || |||||||||  |||| ||||||| | |||||| ||| ||||||||||| |||||||||||||| ||  ||| ||||  ||||||    
T  28562827 tgtcaaataaat-ccagactgttaagtttaatcccaaatatatatggtggaccaacattatagatagtccaccatagaccttattaaattttccaatttt 28562729  T
Q  410 aaccattagatcttt 424  Q
    |||| || |||||||    
T  28562728 aaccctttgatcttt 28562714  T

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Target: chr2; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 210 - 349
Target Start/End: Original strand, 17459251 - 17459389
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||||||| || ||||||||||||||||||| ||| ||||||||| |||||| ||||||    
T  17459251 ggcttatttgatccattagtcccttaaataatttcaagttttcattttggtcacacaattaataaaacgtacgtttaagtccctcactttttcctccgtt 17459350  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    ||||||||||||  |||||| ||||  |||||||||||||    
T  17459351 tgccaaataaat-tctgacttttaagtttaaccccaaatg 17459389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 11315931 - 11316077
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||| || || ||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||  ||||| ||||||    
T  11315931 ggcttatttaattcattggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtt 11316030  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    ||||||||||||||| | |||||||  ||||  |||||||||||||||    
T  11316031 tgccaaataaatccc-ggctgttaagtttaattccaaatgtctatggt 11316077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 210 - 357
Target Start/End: Complemental strand, 32470693 - 32470547
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| | ||| | |||||||||||||||||| |||||| |||||||||||||||||||||| ||| ||| |||||| ||||| ||||||    
T  32470693 ggcttatttgatccattagtcccctaaataatttcaagtttttattttggtcccacaattaataaaacgtacgtttaagttcctcatgttttcctccgtt 32470594  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    || |||||||||||| | |||||||  ||||| |||||||||||||||    
T  32470593 tgtcaaataaatccc-ggctgttaagtttaactccaaatgtctatggt 32470547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 210 - 357
Target Start/End: Complemental strand, 17460802 - 17460656
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||  ||||| ||||||    
T  17460802 ggcttatttgatccaatggtcctctaattaatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtt 17460703  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    | ||||||||||||| ||| |||||  |||||   |||||||||||||    
T  17460702 tcccaaataaatccc-gaccgttaactttaactttaaatgtctatggt 17460656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 7437879 - 7437766
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||| ||||||||||||||||||||| ||||  |||||||| |||||| ||||||    
T  7437879 ggcttatttgatccaatggttgctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgtt 7437780  T
Q  310 tgccaaataaatcc 323  Q
    | | ||||||||||    
T  7437779 tacaaaataaatcc 7437766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 11317486 - 11317373
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| |||||||| || |||||||||||| ||||||||||| |||||||||||||||||| || ||||  |||||||| |||||| ||||||    
T  11317486 ggcttatttgattcaatggtccctcaaataatttcaaattttcattttggtcccacaattaataaaacatatattttggtccctcaatttttcctccgtt 11317387  T
Q  310 tgccaaataaatcc 323  Q
    || |||||||||||    
T  11317386 tggcaaataaatcc 11317373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 43034586 - 43034477
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgc 312  Q
    ||||||||| |||||||| || ||||||||||||||||||||||| ||| ||||||||||||||||||| |||  |||||||| |||||| ||||||||     
T  43034586 ttatttgattcaatggtccctcaaataatttcaagttttcattttaatctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgt 43034487  T
Q  313 caaataaatc 322  Q
    ||||||||||    
T  43034486 caaataaatc 43034477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 214 - 424
Target Start/End: Original strand, 7436469 - 7436677
Alignment:
Q  214 tatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgcc 313  Q
    ||||||||||||||||| || ||||||||||||||||| |||||| ||| |||||||||||||  ||| |||  || ||||| ||||||||||||||| |    
T  7436469 tatttgatccaatggtccctcaaataatttcaagtttttattttggtcctacaattaataaaatataccttttggt-cctcaatttttcttccgtttgtc 7436567  T
Q  314 aaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaattttaacc 413  Q
    |||||||| ||| || |||||   ||||||||||||| ||||||  || |||||| |||| |||||| | ||||||||  |||||| |  |||||||| |    
T  7436568 aaataaat-cctaacagttaagtctaaccccaaatgtatatggtgaaccaacattgtagatagtccatcgtagactttattaatttgtccaattttaatc 7436666  T
Q  414 attagatcttt 424  Q
     || |||||||    
T  7436667 ctttgatcttt 7436677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 32469146 - 32469260
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaac--gtacatttgagtccctcattttttcttccg 307  Q
    |||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||  |||| |||  |||| ||| |||||| ||||    
T  32469146 ggcttatttgattcaatggtccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtgtaccttttggtccttcactttttcctccg 32469245  T
Q  308 tttgccaaataaatcc 323  Q
     |||||||||||||||    
T  32469246 -ttgccaaataaatcc 32469260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 364
Target Start/End: Original strand, 28561368 - 28561521
Alignment:
Q  212 cttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttg 311  Q
    |||||||||| |||||||| |||||||||||| |||||||||||||| || ||||||||||||||||||  |||  ||||||||  ||||| | ||||||    
T  28561368 cttatttgattcaatggtcccttaaataattttaagttttcattttggtctcacaattaataaaacgtatcttttggtccctcaccttttcctacgtttg 28561467  T
Q  312 ccaaataaa-tccctgactgttaaaattaaccccaaatgtctatggttgactaa 364  Q
     |||||||| ||  ||||||||||  |||| | ||||| |||||||| ||||||    
T  28561468 tcaaataaattctttgactgttaagtttaatctcaaatatctatggtggactaa 28561521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 211 - 322
Target Start/End: Complemental strand, 36011758 - 36011648
Alignment:
Q  211 gcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgttt 310  Q
    |||||||||||||| || ||  ||||||||||| |||||| |||||| |||||| ||||||||||| |||| ||| |||||||||||||||  |||||||    
T  36011758 gcttatttgatccattgatcctttaaataattttaagttt-cattttaatcccataattaataaaatgtacgttttagtccctcattttttaatccgttt 36011660  T
Q  311 gccaaataaatc 322  Q
    ||||||||||||    
T  36011659 gccaaataaatc 36011648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 6030588 - 6030476
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||| ||| || ||||||||| |||||||||||||||||||||||||||| ||| |||| |||   ||| |||| ||||| ||  ||    
T  6030588 ggcttatttgatccaatagtccctcaaataatttgaagttttcattttgatcccacaattaattaaaagtacgttttgatccttcatattttcctctatt 6030489  T
Q  310 tgccaaataaatc 322  Q
    |||||||||||||    
T  6030488 tgccaaataaatc 6030476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 349
Target Start/End: Original strand, 11547657 - 11547795
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||  | |||||  |||||||||||||||||||||||||| || || ||||||||||||  |  ||| |  ||||||||||||| | ||||    
T  11547657 ggcttatttgatttattggtcctttaaataatttcaagttttcattttggtctcataattaataaaacacatgttttaacccctcattttttccttcgtt 11547756  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    || ||||||||| ||||||||||||  |||||||||||||    
T  11547757 tgtcaaataaat-cctgactgttaagtttaaccccaaatg 11547795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 316
Target Start/End: Original strand, 36010578 - 36010681
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgc 312  Q
    |||||||||||| | ||| |||||||||||||| |||||||||||| ||  || |||||||||||||| |||| ||||||||| |||||| | |||||||    
T  36010578 ttatttgatccattagtcccttaaataatttcatgttttcattttggtcttacgattaataaaacgtatattttagtccctcactttttccttcgtttgc 36010677  T
Q  313 caaa 316  Q
    ||||    
T  36010678 caaa 36010681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 213 - 323
Target Start/End: Complemental strand, 42641975 - 42641866
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgc 312  Q
    ||||||||| |||||||| || |||||||||||| |||| |||||| ||||| ||||||||||||| || |||  ||||| || ||||| ||||||||||    
T  42641975 ttatttgattcaatggtccctcaaataatttcaaatttttattttggtcccataattaataaaacgcaccttttggtcccccacttttt-ttccgtttgc 42641877  T
Q  313 caaataaatcc 323  Q
    |||||||||||    
T  42641876 caaataaatcc 42641866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 238 - 349
Target Start/End: Original strand, 29219411 - 29219521
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||| |||||||||||||||||    | ||| |||||||||  ||||| |||||||||||||||||||||  ||||||||  |    
T  29219411 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccc-aactgttaagtt 29219509  T
Q  338 taaccccaaatg 349  Q
    ||||||||||||    
T  29219510 taaccccaaatg 29219521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 238 - 349
Target Start/End: Original strand, 29332710 - 29332820
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||| |||||||||||||||||    | ||| |||||||||  ||||| |||||||||||||||||||||  ||||||||  |    
T  29332710 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccc-aactgttaagtt 29332808  T
Q  338 taaccccaaatg 349  Q
    ||||||||||||    
T  29332809 taaccccaaatg 29332820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 424
Target Start/End: Complemental strand, 2277571 - 2277373
Alignment:
Q  226 tggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    ||||| || |||||||||| ||||||||||||| ||||| || ||||||||| ||  |||  ||||||||  ||  | || ||  | ||||||||||| |    
T  2277571 tggtccctcaaataatttccagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagttcacctcagtcggtcaaataaatccat 2277472  T
Q  326 gactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaattttaaccattagatcttt 424  Q
    |   |||||  ||||||||||||||||||||| ||| |||||  |||| |||||||||||||| ||  ||||||||  |||||||||| || |||||||    
T  2277471 gggagttaactttaaccccaaatgtctatggtggaccaacatggtagatagtccaccatagaccttattaattttttcaattttaaccctttgatcttt 2277373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 325
Target Start/End: Original strand, 6030592 - 6030718
Alignment:
Q  199 aataaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattt 298  Q
    |||||||||| |||||||| ||||   ||||| ||||  |||||||| |||||||||||  |||||||||||||||||    | ||| ||| ||| ||||    
T  6030592 aataaaatataggcttattagatcgtttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaattggcgttttagttccttattt 6030691  T
Q  299 tttcttccgtttgccaaataaatccct 325  Q
    |||| ||||||||||||||||||||||    
T  6030692 tttcctccgtttgccaaataaatccct 6030718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 238 - 349
Target Start/End: Complemental strand, 18617096 - 18616986
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||| |||||||||||||||||    | ||| |||||||||  ||||| |||||||||||||||||||||  ||| ||||  |    
T  18617096 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccc-aactattaagtt 18616998  T
Q  338 taaccccaaatg 349  Q
    ||||||||||||    
T  18616997 taaccccaaatg 18616986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 6028730 - 6028796
Alignment:
Q  197 ataataaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatccc 263  Q
    |||||||||||  ||||||||||||||| ||||||| ||||||||||||| ||||||||||| ||||    
T  6028730 ataataaaataaaggcttatttgatccattggtctcctaaataatttcaaattttcattttggtccc 6028796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 367
Target Start/End: Complemental strand, 6032403 - 6032275
Alignment:
Q  239 aatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaatt 338  Q
    ||||||| ||||| |||||| | |||||||||||||||      ||| ||||||  |||||||| || ||||||||||||||||| |||| |||||  ||    
T  6032403 aatttcatgtttttattttggttccacaattaataaaaatggtgttttagtcccgtattttttcctctgtttgccaaataaatccatgaccgttaacttt 6032304  T
Q  339 aaccccaaatgtctatggttgactaacat 367  Q
    |||  |||||||||||||||||| |||||    
T  6032303 aacttcaaatgtctatggttgaccaacat 6032275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 34468984 - 34469068
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatc 322  Q
    |||||||| |||||||||||| || ||||||||||||||   || ||| |||||||||  |||||||| ||||||||||||||||    
T  34468984 taatttcatgttttcattttggtcgcacaattaataaaaatgacgttttagtccctcacattttcttctgtttgccaaataaatc 34469068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 44192536 - 44192453
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaat 321  Q
    |||||||| |||||||||||||||||| |||||||||||    ||||| |||||||||  ||||| |||||||| |||||||||    
T  44192536 taatttcatgttttcattttgatcccaaaattaataaaaatggcattttagtccctcacattttcctccgtttgtcaaataaat 44192453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 238 - 332
Target Start/End: Original strand, 44191162 - 44191256
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgtt 332  Q
    |||||||| |||||||||||  |||||||||||||||||  | ||||| ||||||||||  ||||  | ||||| |||||||||||||| |||||    
T  44191162 taatttcatgttttcattttagtcccacaattaataaaaattgcattttagtccctcatcgtttccactgtttgtcaaataaatccctgcctgtt 44191256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 401
Target Start/End: Original strand, 34147237 - 34147325
Alignment:
Q  313 caaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataattttt 401  Q
    ||||||||||| ||  ||||||  ||||||||||||||||||||| ||| |||||  |||| |||||||||||||| ||  ||||||||    
T  34147237 caaataaatccatgggtgttaactttaaccccaaatgtctatggtggaccaacatggtagatagtccaccatagaccttattaattttt 34147325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 12359809 - 12359650
Alignment:
Q  198 taataaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcatt 297  Q
    |||| |||||| |||||||| ||||   | ||| |||||||||||||| |||||| ||||  |||||||||||||||||    | |||  ||||||||||    
T  12359809 taattaaatataggcttattagatcaccttgtcccttaaataatttcatgttttcgttttagtcccacaattaataaaattggcgttttggtccctcatt 12359710  T
Q  298 ttttcttccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    ||||| |  ||| ||||||||||||| |  |||||||  ||||||  || ||||||||||    
T  12359709 ttttcctttgttcgccaaataaatccgtagctgttaactttaaccttaagtgtctatggt 12359650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 34464069 - 34464117
Alignment:
Q  313 caaataaatccctgactgttaaaattaaccccaaatgtctatggttgac 361  Q
    |||||||||| |||||||||||  |||||||||||||||||| ||||||    
T  34464069 caaataaatctctgactgttaagtttaaccccaaatgtctatcgttgac 34464117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 29220999 - 29220871
Alignment:
Q  205 atatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttctt 304  Q
    |||| |||||||| ||||   ||||| ||||  ||||||||  ||||||||||| |||||||||||||||||    | ||| ||||||| |  ||||| |    
T  29220999 atattggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcct 29220900  T
Q  305 ccgtttgccaaataaatccctgactgttaa 334  Q
    | ||||||||||| |||||| |||||||||    
T  29220899 ctgtttgccaaattaatccc-gactgttaa 29220871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 29334298 - 29334170
Alignment:
Q  205 atatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttctt 304  Q
    |||| |||||||| ||||   ||||| ||||  ||||||||  ||||||||||| |||||||||||||||||    | ||| ||||||| |  ||||| |    
T  29334298 atattggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcct 29334199  T
Q  305 ccgtttgccaaataaatccctgactgttaa 334  Q
    | ||||||||||| |||||| |||||||||    
T  29334198 ctgtttgccaaattaatccc-gactgttaa 29334170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 7e-41; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 22047730 - 22047843
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| |||  ||||||||||||||| ||||||    
T  22047730 ggcttatttgatccaatggtcccttaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcattttttcctccgtt 22047829  T
Q  310 tgccaaataaatcc 323  Q
    ||||||||||||||    
T  22047830 tgccaaataaatcc 22047843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 210 - 357
Target Start/End: Complemental strand, 325303 - 325157
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||| ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||||||  ||||| ||||||    
T  325303 ggcttatttgatctaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaagttttcctccgtt 325204  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    ||||||||||||||| |||||||||  ||||| | |||||||||||||    
T  325203 tgccaaataaatccc-gactgttaactttaactctaaatgtctatggt 325157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 212 - 349
Target Start/End: Original strand, 39603853 - 39603989
Alignment:
Q  212 cttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttg 311  Q
    ||||||||||||| || || || ||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||  ||||| ||||||||    
T  39603853 cttatttgatccattgatccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttg 39603952  T
Q  312 ccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    |||||||||| | ||||||||||  |||||||||||||    
T  39603953 ccaaataaat-catgactgttaagtttaaccccaaatg 39603989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 210 - 373
Target Start/End: Complemental strand, 22049254 - 22049092
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||| ||| | ||| | ||||||||||||||||||||||||| ||||| |||||||||||||||| |||  |||||||| |||||| || |||    
T  22049254 ggcttatttgaaccattagtcccctaaataatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctgtt 22049155  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattataga 373  Q
    || |||||||||||||| |||||||  |||||||||||||||||| || ||||| |||| ||||    
T  22049154 tggcaaataaatccctg-ctgttaagtttaaccccaaatgtctattgtagactaccattttaga 22049092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 210 - 349
Target Start/End: Complemental strand, 30859290 - 30859152
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| || | ||| || |||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||  ||||| || |||    
T  30859290 ggcttatttgattcattagtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcacattttcctctgtt 30859191  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    |||||||||| | | |||| |||||  |||||||||||||    
T  30859190 tgccaaataagt-cttgaccgttaagtttaaccccaaatg 30859152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 210 - 319
Target Start/End: Original strand, 15941272 - 15941380
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgta-catttgagtccctcattttttcttccgt 308  Q
    |||||||||||||||| |||| ||| |||||||| |||||||||||||||| ||| ||||||||||||||| |||||| |||||||| ||||||||||||    
T  15941272 ggcttatttgatccaacggtc-cttcaataattttaagttttcattttgattccataattaataaaacgtaccatttg-gtccctcactttttcttccgt 15941369  T
Q  309 ttgccaaataa 319  Q
    ||| |||||||    
T  15941370 ttgtcaaataa 15941380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 213 - 323
Target Start/End: Complemental strand, 39605584 - 39605474
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgc 312  Q
    ||||||||| ||||||||   ||| ||||||||||||||||||||| |||||||||||||||||| ||| |||  ||||||||  ||||| |||||||||    
T  39605584 ttatttgattcaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacatacgttttggtccctcagattttcctccgtttgc 39605485  T
Q  313 caaataaatcc 323  Q
    |||||||||||    
T  39605484 caaataaatcc 39605474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 238 - 424
Target Start/End: Complemental strand, 33174050 - 33173863
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||||||||||| |||||||||    | ||| |||||||||  ||||| || ||||||||||||||||| || |||||||  |    
T  33174050 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctctgtttgccaaataaatccttggctgttaagtt 33173951  T
Q  338 taaccccaaatgtctatggttgactaacattatagag-agtccaccatagactttgataa-tttttaaaattttaaccattagatcttt 424  Q
    |||||||||||||||||||| ||| ||| ||| ||||  ||| |||||||||||   ||| ||||| ||||||||||| || |||||||    
T  33173950 taaccccaaatgtctatggtggaccaacctta-agagtggtctaccatagacttcattaatttttttaaattttaaccgtttgatcttt 33173863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 234 - 357
Target Start/End: Complemental strand, 22308893 - 22308770
Alignment:
Q  234 taaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgtta 333  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||   | ||| |||||||||  ||||  |||||||||||||||||||| ||  |||||    
T  22308893 taaataatttcatgttttcattttggtcccataattaataaaacaggcgttttagtccctcacattttgctccgtttgccaaataaatccatggttgtta 22308794  T
Q  334 aaattaaccccaaatgtctatggt 357  Q
    |  |||||||||||||||||||||    
T  22308793 agtttaaccccaaatgtctatggt 22308770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 27705432 - 27705323
Alignment:
Q  212 cttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttg 311  Q
    |||||||||| |||||||  || |||||||||||||||||||||||| ||  |||||||||||||||||| |||  ||||||||  ||||| ||| ||||    
T  27705432 cttatttgattcaatggttcctcaaataatttcaagttttcattttggtcatacaattaataaaacgtacgttttggtccctcagattttcctccttttg 27705333  T
Q  312 ccaaataaat 321  Q
    ||||||||||    
T  27705332 ccaaataaat 27705323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 30857798 - 30857910
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| ||||||||   ||| |||||| |||||||||||||| |||||||||||||||||||||  |||  |||| |||  ||||| ||| ||    
T  30857798 ggcttatttgattcaatggtcctctaattaattttaagttttcattttggtcccacaattaataaaacgtatgttttggtccttcagattttcctccttt 30857897  T
Q  310 tgccaaataaatc 322  Q
    || ||||||||||    
T  30857898 tgtcaaataaatc 30857910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 349
Target Start/End: Original strand, 15548240 - 15548373
Alignment:
Q  212 cttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttg 311  Q
    ||||||||||||| ||||| | ||||||||||||| ||||  |||| |||||| |||||||||||   ||  || ||||||||| |||||| ||||||||    
T  15548240 cttatttgatccattggtcccctaaataatttcaaatttt--tttttatcccataattaataaaattcactatttagtccctca-tttttcctccgtttg 15548336  T
Q  312 ccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    |||||||||| |||| |||||||  ||||||| |||||    
T  15548337 ccaaataaat-cctgcctgttaagtttaaccctaaatg 15548373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 41798064 - 41798004
Alignment:
Q  211 gcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaa 271  Q
    |||||||||||||| ||||| || ||||||||||||||||| |||||| ||||||||||||    
T  41798064 gcttatttgatccattggtccctcaaataatttcaagtttttattttggtcccacaattaa 41798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 357
Target Start/End: Complemental strand, 30912252 - 30912134
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||| |||||||||||||||||    | ||| |||||||||  ||||  |||||||||||||||||||||  | ||||||  |    
T  30912252 taatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccctcacctttttctccgtttgccaaataaatccc-aagtgttaactt 30912154  T
Q  338 taaccccaaatgtctatggt 357  Q
    |||| |||||| ||||||||    
T  30912153 taactccaaatatctatggt 30912134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 401
Target Start/End: Original strand, 32757839 - 32758014
Alignment:
Q  226 tggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    ||||| || |||||||||| ||||||||||||| ||||| || |||||||||  |  |||  ||||||||  ||  | ||||   | ||||||||||| |    
T  32757839 tggtccctcaaataatttccagttttcattttggtcccataaataataaaactcatgttttggtccctcaagttcacctccgccggtcaaataaatccat 32757938  T
Q  326 gactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataattttt 401  Q
    |  ||||||  ||||||||||||||||||||| ||| |||||  |||| |||||||||||||| ||  ||||||||    
T  32757939 gggtgttaactttaaccccaaatgtctatggtggaccaacatggtagatagtccaccatagaccttattaattttt 32758014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 349
Target Start/End: Original strand, 30910767 - 30910877
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||| |||||||||||||||||    | ||| |||||||||  ||||| || |||| ||||||||||| | |||||||||  |    
T  30910767 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctctgtttaccaaataaatctc-gactgttaactt 30910865  T
Q  338 taaccccaaatg 349  Q
    |||| |||||||    
T  30910866 taacaccaaatg 30910877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 324
Target Start/End: Original strand, 34894147 - 34894261
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||| |||||| ||||| ||||| ||||||| | ||||||||||| ||||  || |||||||| |||| |||  |||||| | ||||   ||||||    
T  34894147 ggcttattagatccattggtcccttaattaatttccatttttcattttggtcccgtaagtaataaaaagtaccttttggtcccttagttttgtctccgtt 34894246  T
Q  310 tgccaaataaatccc 324  Q
    ||||||| |||||||    
T  34894247 tgccaaaaaaatccc 34894261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 316
Target Start/End: Complemental strand, 34899069 - 34898963
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||| |||||| ||||| ||||| ||||||  | ||||||||||| ||||| || |||||||| ||||||||  |||||| | ||||   ||||||    
T  34899069 ggcttattagatccattggtcccttaattaattttcatttttcattttggtcccataagtaataaaaagtacattttggtcccttagttttgtctccgtt 34898970  T
Q  310 tgccaaa 316  Q
    |||||||    
T  34898969 tgccaaa 34898963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 212 - 277
Target Start/End: Original strand, 11262256 - 11262321
Alignment:
Q  212 cttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaac 277  Q
    ||||||| ||||| ||||  | |||||||||| |||||||||||||  ||||||||||||||||||    
T  11262256 cttattttatccattggttccctaaataattttaagttttcattttagtcccacaattaataaaac 11262321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 8521269 - 8521320
Alignment:
Q  226 tggtctcttaaataatttcaagttttcattttgatcccacaattaataaaac 277  Q
    ||||| ||||| ||||||||||||||||||||| ||||| || |||||||||    
T  8521269 tggtcccttaattaatttcaagttttcattttggtcccataactaataaaac 8521320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 325
Target Start/End: Original strand, 22307530 - 22307621
Alignment:
Q  234 taaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    |||| ||||||| |||||||||||| | ||| ||||||||||||     ||| ||||||||| |||||  || |||||||||||||||||||    
T  22307530 taaacaatttcatgttttcattttggttccataattaataaaacaggtgttttagtccctcactttttgctctgtttgccaaataaatccct 22307621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 388
Target Start/End: Original strand, 42510236 - 42510287
Alignment:
Q  337 ttaaccccaaatgtctatggttgactaacattatagagagtccaccatagac 388  Q
    |||||| ||||||||||||||  ||||||||||| || ||||||||||||||    
T  42510236 ttaacctcaaatgtctatggtgcactaacattattgatagtccaccatagac 42510287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 9169606 - 9169651
Alignment:
Q  232 cttaaataatttcaagttttcattttgatcccacaattaataaaac 277  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||    
T  9169606 cttaattaatttcaagttttcattttagtcccataattaataaaac 9169651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 24503191 - 24503296
Alignment:
Q  219 gatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaata 318  Q
    |||||| ||||| ||||| ||||| | | ||||||||||| ||||| || ||||||||||||| |||  |||||| | ||||   || |||||||||| |    
T  24503191 gatccattggtcccttaattaattaccaattttcattttggtcccataagtaataaaacgtaccttttggtcccttagttttctctctgtttgccaaaaa 24503290  T
Q  319 aatccc 324  Q
    ||||||    
T  24503291 aatccc 24503296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 1102727 - 1102763
Alignment:
Q  321 tccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    ||||||||||||||  |||||||||||||||||||||    
T  1102727 tccctgactgttaactttaaccccaaatgtctatggt 1102763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 324
Target Start/End: Complemental strand, 24509140 - 24509040
Alignment:
Q  224 aatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatcc 323  Q
    ||||||| ||||| ||||| | | ||||||||||| ||||| || ||||||||||||| |||  |||||| | ||||   || |||||||||| ||||||    
T  24509140 aatggtcccttaattaattaccaattttcattttggtcccataagtaataaaacgtaccttttggtcccttagttttctctctgtttgccaaaaaaatcc 24509041  T
Q  324 c 324  Q
    |    
T  24509040 c 24509040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 123967 - 124113
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||| |||||| || |||    
T  123967 ggcttatttgatccaatggtccttcaaataatttcaagttttcattttggtcccacaattaataaaacgtacattttggtccctcactttttcctctgtt 124066  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    |||||||||||| ||| || |||||  |||||||||||| ||||||||    
T  124067 tgccaaataaat-ccttacggttaagtttaaccccaaatatctatggt 124113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 211 - 349
Target Start/End: Complemental strand, 125350 - 125213
Alignment:
Q  211 gcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgttt 310  Q
    |||||||||||||||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||| |||  |||||||| |||||| |||||||    
T  125350 gcttatttgatccaatggtccctcaaataatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgttt 125251  T
Q  311 gccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    ||||||||||| ||| || |||||  |||||||||||||    
T  125250 gccaaataaat-cctaacggttaagtttaaccccaaatg 125213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 4e-36; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 210 - 347
Target Start/End: Original strand, 42870811 - 42870947
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| | |||||| || |||    
T  42870811 ggcttatttgatccaatggtttcctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgttttagtcccttactttttcgtctgtt 42870910  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaa 347  Q
    |||| ||| ||| ||||||||||||  |||||||||||    
T  42870911 tgccgaatgaat-cctgactgttaagtttaaccccaaa 42870947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 210 - 357
Target Start/End: Complemental strand, 42872307 - 42872161
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| ||| || ||| |||||||||||| ||| ||||| ||| |||||| ||||||    
T  42872307 ggcttatttgatccaatggtcccttaaataattttaagttttcattttaatctcataatgaataaaacgtacgttttagtccttcactttttcctccgtt 42872208  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    || ||||||||| |||||| |||||  |||||| ||||||||||||||    
T  42872207 tgtcaaataaat-cctgacggttaactttaacctcaaatgtctatggt 42872161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 32798650 - 32798537
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||| |||||  ||||||    
T  32798650 ggcttatttgatgcaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttagtccctcaattttttctccgtt 32798551  T
Q  310 tgccaaataaatcc 323  Q
    || |||||||||||    
T  32798550 tgtcaaataaatcc 32798537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 199 - 319
Target Start/End: Original strand, 32797125 - 32797245
Alignment:
Q  199 aataaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattt 298  Q
    |||||||| | ||||||||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||  |    
T  32797125 aataaaattttggcttatttgatctattggtcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggt 32797224  T
Q  299 tttcttccgtttgccaaataa 319  Q
    |||| ||||||| ||||||||    
T  32797225 tttcctccgtttaccaaataa 32797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 210 - 349
Target Start/End: Complemental strand, 44076481 - 44076343
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||| || |||||||||||| |||| |||||| |||||||||||||||||||||  |||  || ||||| |||||| ||||||    
T  44076481 ggcttatttgatccaatggtccctcaaataatttcaaatttttattttggtcccacaattaataaaacgtatcttttggtgcctcaatttttcctccgtt 44076382  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    |||||||||||||||| || |||||  |||||||||||||    
T  44076381 tgccaaataaatccct-acagttaagtttaaccccaaatg 44076343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 26696530 - 26696643
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| |||||||| | ||| ||||||||||||||||||||| |||||||||||||||||| |||||||  |||||||| |||||| ||| ||    
T  26696530 ggcttatttgattcaatggtcccctaattaatttcaagttttcattttggtcccacaattaataaaacatacattttggtccctcactttttcctccatt 26696629  T
Q  310 tgccaaataaatcc 323  Q
    ||||||||||||||    
T  26696630 tgccaaataaatcc 26696643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 6397781 - 6397927
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| |  |||  ||||||||||||  ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||  ||||||    
T  6397781 ggcttatttgatccattaatcttctaaataatttcatattttcattttggtcccacaattaataaaacttacattttagtccctcatttttttctccgtt 6397880  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    |||||||||||| | ||| ||||||| ||||| ||||||  |||||||    
T  6397881 tgccaaataaat-catgaatgttaaatttaactccaaataactatggt 6397927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 30787718 - 30787605
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||| |||| ||||| ||||||||| |||||||||||||| ||||| |||||||||||  || ||||  |||||||| |||||||||||||    
T  30787718 ggcttatttgatctaatgttctctcaaataattttaagttttcattttggtcccataattaataaaatatatattttggtccctcactttttcttccgtt 30787619  T
Q  310 tgccaaataaatcc 323  Q
    ||||||||||||||    
T  30787618 tgccaaataaatcc 30787605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 357
Target Start/End: Complemental strand, 8571735 - 8571587
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||| | ||||||| ||| ||||||||  ||||||||||| ||  |||||||||||||||||| |||  |||| |||||||||  ||||||    
T  8571735 ggcttatttgatctattggtctcctaactaatttcacattttcattttggtcatacaattaataaaacgtacgttttggtccttcatttttttctccgtt 8571636  T
Q  310 tgccaaataaatccct-gactgttaaaattaaccccaaatgtctatggt 357  Q
    | |||||||||||||| | |||||||  |||||||||||||||||||||    
T  8571635 taccaaataaatccctagtctgttaagtttaaccccaaatgtctatggt 8571587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 354
Target Start/End: Complemental strand, 28420292 - 28420148
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||| | |||||| ||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||  || ||| |||||||||||||||| ||||||    
T  28420292 ggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtt 28420193  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctat 354  Q
    || |||||||||| |  ||||||||  ||||| | ||||||||||    
T  28420192 tgtcaaataaatctcaaactgttaactttaactctaaatgtctat 28420148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 248 - 388
Target Start/End: Complemental strand, 26697912 - 26697773
Alignment:
Q  248 ttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaattaaccccaaa 347  Q
    ||||||||||  ||||| |||||||||||||||| ||| ||||||||| |||||||||| |||| | ||||||| ||| | ||||||  |||||||||||    
T  26697912 ttttcattttagtcccataattaataaaacgtacgttttagtccctcactttttcttccttttgtcgaataaat-cctaattgttaagtttaaccccaaa 26697814  T
Q  348 tgtctatggttgactaacattatagagagtccaccatagac 388  Q
    ||| |||||| ||| ||||||||| | ||||||||||||||    
T  26697813 tgtttatggtggaccaacattatatatagtccaccatagac 26697773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 28418804 - 28418916
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||| | |||||| ||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||  || ||| ||||||||| |||||| ||||||    
T  28418804 ggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtt 28418903  T
Q  310 tgccaaataaatc 322  Q
    |||||||||||||    
T  28418904 tgccaaataaatc 28418916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 213 - 357
Target Start/End: Original strand, 41629709 - 41629852
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgc 312  Q
    |||||||||||| | ||| | |||||||||||||||||| |||||| || |||||||||||||||||| ||||   |||||||  |||||||||||||||    
T  41629709 ttatttgatccattagtcccctaaataatttcaagtttttattttggtctcacaattaataaaacgtatattttgatccctcaagttttcttccgtttgc 41629808  T
Q  313 caaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    |||||||||||| ||| |||||  | ||| ||||| |||||||||    
T  41629809 caaataaatccc-gaccgttaacttgaactccaaaagtctatggt 41629852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 210 - 325
Target Start/End: Original strand, 8570116 - 8570231
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||||||||| | ||| |||||||| |||||||||||| ||| |||||||||||||||||| |||  |||||||| ||||   || |||    
T  8570116 ggcttatttgatccaatggtcccctaattaatttcacgttttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttgtctctgtt 8570215  T
Q  310 tgccaaataaatccct 325  Q
    ||||||||||||||||    
T  8570216 tgccaaataaatccct 8570231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 210 - 349
Target Start/End: Complemental strand, 32695393 - 32695255
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| || ||||| || |||||||||||||||||||||||| || ||||||||||||||||||| ||| ||||| |||  ||||| || |||    
T  32695393 ggcttatttgattcattggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtacgtttaagtccttcacgttttcctctgtt 32695294  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    |||||||| | | |||||| |||||  |||||||||||||    
T  32695293 tgccaaattagt-cctgaccgttaagtttaaccccaaatg 32695255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 235 - 357
Target Start/End: Original strand, 22551030 - 22551151
Alignment:
Q  235 aaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaa 334  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||  |||  |||||||| |||||| ||| ||||||||||||||||  || ||||||    
T  22551030 aaataatttcaagtttttattttggtcccacaattaataaaacgtatcttttggtccctcactttttc-tccatttgccaaataaatcctggattgttaa 22551128  T
Q  335 aattaaccccaaatgtctatggt 357  Q
      |||||||||||| ||||||||    
T  22551129 gtttaaccccaaatctctatggt 22551151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 210 - 334
Target Start/End: Original strand, 30786674 - 30786797
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| ||||||||  | ||||||||| ||||||||||||||||| || ||||||||||||||| ||||   ||||||| |||||  ||||||    
T  30786674 ggcttatttgattcaatggtccttcaaataattttaagttttcattttgatcacataattaataaaacgtatattttgatccctcacttttttctccgtt 30786773  T
Q  310 tgccaaataaatccctgactgttaa 334  Q
    |||||||||||| || |||||||||    
T  30786774 tgccaaataaattcc-gactgttaa 30786797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 252 - 323
Target Start/End: Original strand, 29103527 - 29103598
Alignment:
Q  252 cattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatcc 323  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||    
T  29103527 cattttggtcccacaattaataaaacgtacatttgagtccctcattttttcctccgattgctaaataaatcc 29103598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 238 - 413
Target Start/End: Complemental strand, 45437572 - 45437397
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    ||||||||||||||||||||||||||| ||||||||||||  |  |||  ||||||| | ||| | |||| | | ||||||||||||||||||||||  |    
T  45437572 taatttcaagttttcattttgatcccataattaataaaactcatgttttggtccctcgtgtttgcctccgctagtcaaataaatccctgactgttaagtt 45437473  T
Q  338 taaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataatttttaaaattttaacc 413  Q
    ||||||||||| | |||||  | | ||||||||||| ||| ||||||| || ||  ||||||||  ||||||||||    
T  45437472 taaccccaaatatttatggcgggccaacattatagacagtgcaccatataccttattaattttttcaattttaacc 45437397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 210 - 308
Target Start/End: Complemental strand, 13198059 - 13197961
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgt 308  Q
    |||||||||| ||||||||||  |||||||||||| ||||||| ||||| ||||||||||||||||| |||| ||| ||||||||| |||||| |||||    
T  13198059 ggcttatttgctccaatggtccattaaataatttcgagttttcgttttggtcccacaattaataaaaggtacgtttaagtccctcactttttcctccgt 13197961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 41630247 - 41630151
Alignment:
Q  205 atatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcatttttt 301  Q
    |||| ||||||||||||||||||||  |||||||||||| || ||||||||||  || ||||||||||||||||||| ||| ||||||||| |||||    
T  41630247 atataggcttatttgatccaatggttccttaaataattttaaattttcattttagtctcacaattaataaaacgtacctttaagtccctcaattttt 41630151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 349
Target Start/End: Original strand, 4810467 - 4810605
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||| ||||||| || ||||| |||||| |||| |||||| ||||| |||||||||||||||  |||  |||| |||  ||||  ||||||    
T  4810467 ggcttatttgatctaatggtccctcaaatactttcaaatttttattttggtcccataattaataaaacgtatgttttggtccttcaaatttttctccgtt 4810566  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    ||||||||||||||| ||| |||||  |||||||||||||    
T  4810567 tgccaaataaatccc-gacggttaactttaaccccaaatg 4810605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 210 - 324
Target Start/End: Original strand, 32693828 - 32693942
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||||||| ||||||||   ||| |||||| |||||||||||||| |||||||||||||||||| |||  ||  |||| |||  ||||| ||||||    
T  32693828 ggcttatttgattcaatggtcctctaattaattttaagttttcattttggtcccacaattaataaaacatacgctttggtccttcagattttcctccgtt 32693927  T
Q  310 tgccaaataaatccc 324  Q
    |||||||||||||||    
T  32693928 tgccaaataaatccc 32693942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 211615 - 211708
Alignment:
Q  232 cttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||  || ||| ||||||| | |||||  ||||||| ||||||||||||||    
T  211615 cttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatccct 211708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 240641 - 240548
Alignment:
Q  232 cttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||  || ||| ||||||| | |||||  ||||||| ||||||||||||||    
T  240641 cttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatccct 240548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 725238 - 725331
Alignment:
Q  232 cttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||  || ||| ||||||| | |||||  ||||||| ||||||||||||||    
T  725238 cttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatccct 725331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 793996 - 793903
Alignment:
Q  232 cttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||  || ||| ||||||| | |||||  ||||||| ||||||||||||||    
T  793996 cttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatccct 793903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 13116356 - 13116471
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||| |||||||||||||||||    | ||| ||||| |||  ||||| ||||||||||||||||||||| |||||||||  |    
T  13116356 taatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccttcacattttcctccgtttgccaaataaatccc-gactgttaactt 13116454  T
Q  338 taaccccaaatgtctat 354  Q
    |||| ||||||||||||    
T  13116455 taactccaaatgtctat 13116471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 45281308 - 45281240
Alignment:
Q  208 tgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaa 276  Q
    ||||||||||||||||||| ||| || |||||||||||||||||||||||| ||| |||||||||||||    
T  45281308 tgggcttatttgatccaatagtccctcaaataatttcaagttttcattttggtccaacaattaataaaa 45281240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 29104450 - 29104371
Alignment:
Q  243 tcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatc 322  Q
    |||| |||| ||||||||||||||||||||||||||||  ||| |||||||||||||||| || ||||| ||||||||||    
T  29104450 tcaaatttttattttgatcccacaattaataaaacgtatgtttaagtccctcattttttcctctgtttgtcaaataaatc 29104371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 45279678 - 45279824
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||| ||||| || | |||| |||||||||||||| ||||||||||  ||  |||||||||||||||||| |||  ||||||||  |||| || ||||    
T  45279678 ggcttaattgattcatttgtcttttaaataatttcaaattttcattttagtcatacaattaataaaacgtacgttttggtccctcaagttttttttcgtt 45279777  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggt 357  Q
    || |||||||||||| ||| |||||  ||||| | |||||| ||||||    
T  45279778 tggcaaataaatccc-gacggttaactttaactctaaatgtatatggt 45279824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 356
Target Start/End: Complemental strand, 212830 - 212684
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| | ||| |  |||||||||||  ||||||||||  |||||||||||| |||||     ||| ||||||||| |||||| | ||||    
T  212830 ggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtt 212731  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatgg 356  Q
    || ||||||||||  ||  ||||||  ||||||||||||||||||||    
T  212730 tgtcaaataaatctatgggtgttaactttaaccccaaatgtctatgg 212684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 356
Target Start/End: Original strand, 239424 - 239570
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| | ||| |  |||||||||||  ||||||||||  |||||||||||| |||||     ||| ||||||||| |||||| | ||||    
T  239424 ggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtt 239523  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatgg 356  Q
    || ||||||||||  ||  ||||||  ||||||||||||||||||||    
T  239524 tgtcaaataaatctatgggtgttaactttaaccccaaatgtctatgg 239570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 356
Target Start/End: Complemental strand, 726453 - 726307
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| | ||| |  |||||||||||  ||||||||||  |||||||||||| |||||     ||| ||||||||| |||||| | ||||    
T  726453 ggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtt 726354  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatgg 356  Q
    || ||||||||||  ||  ||||||  ||||||||||||||||||||    
T  726353 tgtcaaataaatctatgggtgttaactttaaccccaaatgtctatgg 726307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 356
Target Start/End: Original strand, 792779 - 792925
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| | ||| |  |||||||||||  ||||||||||  |||||||||||| |||||     ||| ||||||||| |||||| | ||||    
T  792779 ggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtt 792878  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatgg 356  Q
    || ||||||||||  ||  ||||||  ||||||||||||||||||||    
T  792879 tgtcaaataaatctatgggtgttaactttaaccccaaatgtctatgg 792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 356
Target Start/End: Complemental strand, 798954 - 798808
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| | ||| |  |||||||||||  ||||||||||  |||||||||||| |||||     ||| ||||||||| |||||| | ||||    
T  798954 ggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtt 798855  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatgg 356  Q
    || ||||||||||  ||  ||||||  ||||||||||||||||||||    
T  798854 tgtcaaataaatctatgggtgttaactttaaccccaaatgtctatgg 798808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 348
Target Start/End: Complemental strand, 17339639 - 17339530
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    ||||||||  ||||||||||| ||| |||||||||||||    ||||| |||||||||  ||||| |||||||||||||||||| ||||||||||||  |    
T  17339639 taatttcatattttcattttggtccaacaattaataaaaatggcattttagtccctcacgttttcctccgtttgccaaataaat-cctgactgttaagtt 17339541  T
Q  338 taaccccaaat 348  Q
    |||| ||||||    
T  17339540 taactccaaat 17339530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 12850513 - 12850464
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttga 259  Q
    ||||||||||||||||||||| || |||||||||||| ||||||||||||    
T  12850513 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttga 12850464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 348
Target Start/End: Complemental strand, 6398577 - 6398478
Alignment:
Q  248 ttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaattaaccccaaa 347  Q
    ||||||||||| || || ||||||||||||   | ||| |||||||||||||||| |||||||| ||||||||| | ||||||||||  ||||||| |||    
T  6398577 ttttcattttggtctcataattaataaaacaagcgttttagtccctcattttttcctccgtttgtcaaataaat-catgactgttaagtttaaccctaaa 6398479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 17338067 - 17338151
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatc 322  Q
    |||||||| |||||||||||| |||||||||||||||||    | ||| |||||||||  ||||  |||||||||||||||||||    
T  17338067 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacatttttctccgtttgccaaataaatc 17338151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 357
Target Start/End: Complemental strand, 42100196 - 42100078
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    |||||||| |||||||||||| || ||||||||||||||    | |||   |||||||| ||||| |||||||||||||||| |||| |||||||||  |    
T  42100196 taatttcatgttttcattttggtctcacaattaataaaaatggcgttttgatccctcatattttcctccgtttgccaaataattccc-gactgttaactt 42100098  T
Q  338 taaccccaaatgtctatggt 357  Q
    ||||  ||||||||| ||||    
T  42100097 taacttcaaatgtctttggt 42100078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 13117723 - 13117637
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccc 324  Q
    |||||||| |||||||||||| ||||| |||||||||||    | ||| |||||||||  ||||| || ||||||||||||||||||    
T  13117723 taatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgtttgccaaataaatccc 13117637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 45394987 - 45395032
Alignment:
Q  232 cttaaataatttcaagttttcattttgatcccacaattaataaaac 277  Q
    ||||| |||||| |||||||||||||||||||| ||||||||||||    
T  45394987 cttaattaattttaagttttcattttgatcccataattaataaaac 45395032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 42877633 - 42877684
Alignment:
Q  226 tggtctcttaaataatttcaagttttcattttgatcccacaattaataaaac 277  Q
    ||||||||||| ||||||||||||||||||||| || || || |||||||||    
T  42877633 tggtctcttaattaatttcaagttttcattttggtctcataactaataaaac 42877684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 42098589 - 42098627
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaa 276  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  42098589 taatttcatgttttcattttggtcccacaattaataaaa 42098627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 202 - 422
Target Start/End: Complemental strand, 109871 - 109652
Alignment:
Q  202 aaaatatgggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcatttttt 301  Q
    ||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| |||||    
T  109871 aaaatataggcttatttgattcaatggtcccttaaataatttcaagttttcattttggtcctacaattaataaaacgtacattttagtccctcacttttt 109772  T
Q  302 cttccgtttgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagactttgataattttt 401  Q
      ||  |||||||||| ||||||  ||| ||||  |||||  ||||||| |||||| ||| ||| ||| | | |||||| | ||||| ||  |||||||     
T  109771 tctcaatttgccaaatgaatccc-aactattaactttaacttcaaatgtatatggtggaccaaccttaaaaatagtccatcgtagaccttattaattttg 109673  T
Q  402 aaaattttaaccattagatct 422  Q
      ||||||||||||| |||||    
T  109672 ttaattttaaccatttgatct 109652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 348
Target Start/End: Original strand, 108539 - 108648
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    ||||||| | ||| ||||||||||||| |||||||||||||||| |||   |||||||||||||| ||| |||||||||||||||| || | |||||  |    
T  108539 taatttccattttacattttgatcccataattaataaaacgtacgttttgatccctcattttttcctccatttgccaaataaatccttg-cagttaagtt 108637  T
Q  338 taaccccaaat 348  Q
    |||||||||||    
T  108638 taaccccaaat 108648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 210 - 349
Target Start/End: Complemental strand, 54303 - 54165
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    ||||||||||||||| ||||| || ||||||||||||||||| |||||| || ||||||||||||||||| | |||  ||||||||  ||||| ||||||    
T  54303 ggcttatttgatccattggtccctcaaataatttcaagttttaattttggtcgcacaattaataaaacgtgcgttttggtccctcaaattttcctccgtt 54204  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatg 349  Q
    |||||||||||| | ||||||||||   ||||||||||||    
T  54203 tgccaaataaat-cgtgactgttaagtataaccccaaatg 54165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 324
Target Start/End: Original strand, 52596 - 52704
Alignment:
Q  216 tttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaa 315  Q
    |||||| ||||||||   ||| ||||||||||||||||||||||||||||||||||||||| |||| |||  ||||||||  ||||  ||||||||||||    
T  52596 tttgattcaatggtcctctaattaatttcaagttttcattttgatcccacaattaataaaatgtacgttttggtccctcagatttttctccgtttgccaa 52695  T
Q  316 ataaatccc 324  Q
    |||||||||    
T  52696 ataaatccc 52704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 346
Target Start/End: Complemental strand, 43677 - 43558
Alignment:
Q  226 tggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    ||||| || ||||||||| ||||||| |||||| ||||| |||||||||||||||  ||| ||||||||| |||||| |||||||||||||||| | |||    
T  43677 tggtccctcaaataattttaagtttttattttggtcccataattaataaaacgtatgtttaagtccctcactttttcctccgtttgccaaataagt-cct 43579  T
Q  326 gactgttaaaattaaccccaa 346  Q
    ||| |||||  ||||||||||    
T  43578 gacggttaagtttaaccccaa 43558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 324
Target Start/End: Original strand, 18813 - 18924
Alignment:
Q  213 ttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgc 312  Q
    |||||||||||| || ||  ||||||||||| |||||||||||||| ||||| | |||||||||| ||  ||| ||||||||| |||||  |||||||||    
T  18813 ttatttgatccattgatcctttaaataattttaagttttcattttggtcccatatttaataaaacttatgttttagtccctcactttttactccgtttgc 18912  T
Q  313 caaataaatccc 324  Q
    ||||||||||||    
T  18913 caaataaatccc 18924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 235 - 355
Target Start/End: Complemental strand, 63224 - 63104
Alignment:
Q  235 aaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaa 334  Q
    ||||||||||  |||||||||||| ||||||||||||||||     | ||| |||||||||  ||||  |||||||||||||||||||||||||||||||    
T  63224 aaataatttcgtgttttcattttggtcccacaattaataaagatggcgttttagtccctcacatttttctccgtttgccaaataaatccctgactgttaa 63125  T
Q  335 aattaaccccaaatgtctatg 355  Q
      |||||  ||||||||||||    
T  63124 gtttaacttcaaatgtctatg 63104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 322
Target Start/End: Original strand, 61873 - 61961
Alignment:
Q  234 taaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatc 322  Q
    |||||||||||| |||||||||||| || || |||||||||||    | ||| |||||||||| |||||||||||||||||||||||||    
T  61873 taaataatttcatgttttcattttggtctcataattaataaaaatggcgttttagtccctcatcttttcttccgtttgccaaataaatc 61961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 210 - 424
Target Start/End: Original strand, 21125 - 21339
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||| |||||| ||| | || || ||||||  | ||||||||||  ||||| ||||||||||| |||| |||   ||||| | |||||| ||||||    
T  21125 ggcttattagatccattggcccctcaattaattttcatttttcattttagtcccataattaataaaaagtaccttttgatcccttagtttttcctccgtt 21224  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaatgtctatggttgactaacattatagag-agtccaccatagactttgataatttttaaaattt 408  Q
    |||||||||||||  |   ||||||  |||||| |||||||||||||| ||| ||| ||  ||||  |||||||||||||||   |||||||| ||||||    
T  21225 tgccaaataaatcattcgttgttaagtttaaccacaaatgtctatggtggaccaacctt-cagagtggtccaccatagacttcattaattttttaaattt 21323  T
Q  409 taaccattagatcttt 424  Q
    ||||| || |||||||    
T  21324 taaccgtttgatcttt 21339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 357
Target Start/End: Original strand, 127459 - 127578
Alignment:
Q  238 taatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccctgactgttaaaat 337  Q
    ||||||||||||||| ||||| ||||| || |||||||||  |  |||  ||||||||| ||| | |||||  | |||||||||||||||| |||||  |    
T  127459 taatttcaagttttcgttttggtcccataactaataaaactcatgttttggtccctcatgtttgcctccgtcggtcaaataaatccctgacagttaactt 127558  T
Q  338 taaccccaaatgtctatggt 357  Q
    ||||| ||||||||||||||    
T  127559 taacctcaaatgtctatggt 127578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 226 - 388
Target Start/End: Complemental strand, 1187 - 1025
Alignment:
Q  226 tggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtttgccaaataaatccct 325  Q
    ||||| || |||||||||| ||||||||||||| ||||| || |||||||||  |  |||  ||||||||  ||  | |||||  | ||||||||| | |    
T  1187 tggtccctcaaataatttccagttttcattttggtcccataagtaataaaactcatgttttggtccctcaaattcacctccgtcagtcaaataaattcat 1088  T
Q  326 gactgttaaaattaaccccaaatgtctatggttgactaacattatagagagtccaccatagac 388  Q
    |  ||||||  ||||||||||||||||||||| ||| |||||  |||| ||||||||||||||    
T  1087 gggtgttaactttaaccccaaatgtctatggtggaccaacatggtagatagtccaccatagac 1025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 210 - 348
Target Start/End: Complemental strand, 2593 - 2457
Alignment:
Q  210 ggcttatttgatccaatggtctcttaaataatttcaagttttcattttgatcccacaattaataaaacgtacatttgagtccctcattttttcttccgtt 309  Q
    |||||||| |||| | ||||| || || ||||||| | ||||||||||| ||||||||||||||||| |||| |||  |||||| | |||||| || |||    
T  2593 ggcttattagatcaattggtccctcaattaatttcca-ttttcattttggtcccacaattaataaaaagtaccttttggtcccttagtttttcctctgtt 2495  T
Q  310 tgccaaataaatccctgactgttaaaattaaccccaaat 348  Q
    | |||||||||| || |||||||||  ||||| ||||||    
T  2494 ttccaaataaattcc-gactgttaactttaactccaaat 2457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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