View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2609R-Insertion-14 (Length: 555)
Name: NF2609R-Insertion-14
Description: NF2609R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2609R-Insertion-14 |
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Alignment Details
Target: chr5 (Bit Score: 516; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 516; E-Value: 0
Query Start/End: Original strand, 8 - 551
Target Start/End: Original strand, 6623210 - 6623753
Alignment:
| Q |
8 |
acataatggtcaggttgtacgcaggatgggtcatggattcagaggttcaaaaatgtaggaagataatcaagatatccaaataactaatgaagaatcctca |
107 |
Q |
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| T |
6623210 |
acataatggtcaagttgtacgcaggatgggtcatggattcagaggttaaaaaatgtaggaagataatcaagatatccaagtaactaatgaagaatcctca |
6623309 |
T |
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| Q |
108 |
cctctcggtggcagatttcccttttccaatctgtgcactgacaatggaaaactgatcaggtttgttttctgataaccctctggggctatggggtttatcc |
207 |
Q |
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| T |
6623310 |
cctctcggtggcagatttcccttttccaatctgtgcactgacaatggaaaactgatcaggtttgttttctgataaccctctggggctatggggtttatcc |
6623409 |
T |
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| Q |
208 |
tgccagcataagaaaagttaatatcaaatgcctggtttggcaaatagaaaagagccacagatcttatattattaccatcgaggttgttccattatataga |
307 |
Q |
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| T |
6623410 |
tgccagcataagaaaagttaatatcaaatgcctggtttggcaaatagaaaagagccacagatcttatattattaccatcaaggttgttccattatataga |
6623509 |
T |
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| Q |
308 |
tgggaggaaggtgaaggatctgaatgttgtacgtttttcagaaaccgatgctctaataacattgaagcagttggccgctctgctggatttcttataaagc |
407 |
Q |
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| T |
6623510 |
tgggaggaaggtgaaggatctgaatgttgtacgtttttcagaaaccgatgctctaataacattgaagcagttggccgctctgctggatttcttacaaagc |
6623609 |
T |
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| Q |
408 |
aaagcctcaagaaatctttagcttctggtgacaatgtttcaggtataggaggggtatccttcattaccttaaacatagctgcagcctgcataattagatc |
507 |
Q |
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| T |
6623610 |
aaagcctcaagaaatctttaccttctgttgacaatgtttcaggtataggaggggtatccttcattaccttaaacatagctgcagcctgcataattagatc |
6623709 |
T |
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| Q |
508 |
aaaattcacacctatttaacatatgaaggacatgtatacataca |
551 |
Q |
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| T |
6623710 |
aaaattcacacctatttaacatatgaaggacatgtatacataca |
6623753 |
T |
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