View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2609R-Insertion-4 (Length: 196)
Name: NF2609R-Insertion-4
Description: NF2609R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2609R-Insertion-4 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 47661603 - 47661414
Alignment:
| Q |
8 |
atctggttcacaccgtaggttactcagaaatagtggaacatgagattcttctggaagatattcttgtgtgaatctcaatattgattgatggttaaacctt |
107 |
Q |
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| T |
47661603 |
atctggttcacaccgtaggttactcagaaatagtggaacatgtgattcttctggaagatattcttgtgtgaatctcaatattgattgatggttaaacctt |
47661504 |
T |
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| Q |
108 |
tgtcaaattcggaagacactactcacattcactgccataagcgctctataattaatatacatattgactttaa-tgacatagtaactaaa |
196 |
Q |
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| T |
47661503 |
tgtcaaattcggaagacactactcacattcactgccataagcactctataattaatatacatattgactttaattgacatagtaactaaa |
47661414 |
T |
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