View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2610_low_2 (Length: 758)

Name: NF2610_low_2
Description: NF2610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2610_low_2
NF2610_low_2
[»] chr7 (49 HSPs)
chr7 (72-625)||(43569736-43570272)
chr7 (109-277)||(40212703-40212872)
chr7 (110-277)||(37534192-37534359)
chr7 (109-277)||(9814302-9814471)
chr7 (111-277)||(34930557-34930724)
chr7 (109-277)||(8419677-8419846)
chr7 (109-277)||(25097883-25098052)
chr7 (109-277)||(35488277-35488446)
chr7 (109-277)||(38396454-38396623)
chr7 (109-277)||(45045440-45045609)
chr7 (109-277)||(45265136-45265305)
chr7 (109-277)||(45448756-45448925)
chr7 (109-278)||(45722963-45723132)
chr7 (109-278)||(9947078-9947248)
chr7 (156-277)||(28904321-28904443)
chr7 (109-277)||(38544008-38544177)
chr7 (109-277)||(44565859-44566028)
chr7 (109-277)||(48341177-48341345)
chr7 (111-278)||(39553996-39554164)
chr7 (638-743)||(43570340-43570445)
chr7 (111-277)||(11329807-11329974)
chr7 (111-277)||(41632454-41632621)
chr7 (161-277)||(48160713-48160830)
chr7 (109-277)||(48313936-48314105)
chr7 (109-277)||(30686080-30686248)
chr7 (109-277)||(27248107-27248276)
chr7 (161-277)||(33378648-33378765)
chr7 (161-278)||(41684162-41684279)
chr7 (161-277)||(43949059-43949176)
chr7 (109-241)||(25045705-25045837)
chr7 (111-278)||(27419314-27419482)
chr7 (111-277)||(27213945-27214112)
chr7 (111-277)||(44820068-44820235)
chr7 (109-231)||(18824007-18824128)
chr7 (109-301)||(45440699-45440890)
chr7 (161-277)||(25924777-25924894)
chr7 (109-301)||(11000487-11000685)
chr7 (111-259)||(16825444-16825593)
chr7 (168-278)||(6656618-6656728)
chr7 (161-278)||(31921867-31921982)
chr7 (6-55)||(43569702-43569751)
chr7 (157-300)||(5543268-5543410)
chr7 (152-278)||(38528837-38528962)
chr7 (161-277)||(43446023-43446139)
chr7 (160-255)||(6656362-6656457)
chr7 (166-278)||(40385773-40385885)
chr7 (161-241)||(22156320-22156400)
chr7 (161-241)||(22212235-22212315)
chr7 (248-277)||(18823976-18824005)
[»] chr2 (47 HSPs)
chr2 (109-277)||(45409065-45409233)
chr2 (109-277)||(27358051-27358219)
chr2 (109-277)||(346433-346602)
chr2 (109-277)||(4559373-4559542)
chr2 (109-277)||(5770198-5770367)
chr2 (109-277)||(11071419-11071588)
chr2 (109-277)||(28311785-28311953)
chr2 (109-277)||(2050680-2050849)
chr2 (109-277)||(6171605-6171774)
chr2 (109-277)||(17965797-17965966)
chr2 (109-277)||(42674749-42674918)
chr2 (109-277)||(37233244-37233412)
chr2 (109-277)||(638408-638576)
chr2 (161-300)||(3902248-3902387)
chr2 (111-277)||(41750343-41750510)
chr2 (161-278)||(13760780-13760898)
chr2 (109-291)||(18713745-18713926)
chr2 (109-277)||(1988126-1988294)
chr2 (109-277)||(2521489-2521658)
chr2 (109-278)||(20426571-20426740)
chr2 (161-277)||(26310081-26310198)
chr2 (161-277)||(39995279-39995396)
chr2 (111-277)||(40950949-40951116)
chr2 (111-277)||(9733936-9734103)
chr2 (161-278)||(23943976-23944094)
chr2 (109-277)||(14777586-14777755)
chr2 (109-278)||(14832624-14832793)
chr2 (161-277)||(21737548-21737665)
chr2 (109-277)||(34356788-34356956)
chr2 (109-241)||(37533802-37533935)
chr2 (161-277)||(41729270-41729387)
chr2 (111-277)||(37192336-37192503)
chr2 (109-278)||(45694002-45694171)
chr2 (160-301)||(13790080-13790222)
chr2 (161-278)||(7007398-7007515)
chr2 (165-278)||(4875590-4875703)
chr2 (162-278)||(41298059-41298175)
chr2 (167-278)||(13539482-13539593)
chr2 (109-278)||(40569831-40570003)
chr2 (166-276)||(5002981-5003091)
chr2 (161-271)||(37851678-37851788)
chr2 (217-278)||(3254289-3254350)
chr2 (161-227)||(11763511-11763577)
chr2 (217-278)||(11763597-11763658)
chr2 (220-278)||(39819503-39819561)
chr2 (232-277)||(14253368-14253413)
chr2 (182-242)||(18745537-18745597)
[»] chr1 (51 HSPs)
chr1 (109-277)||(1597430-1597599)
chr1 (109-278)||(39329422-39329592)
chr1 (109-277)||(2632668-2632836)
chr1 (109-277)||(3572653-3572822)
chr1 (109-277)||(46666523-46666692)
chr1 (161-277)||(37436760-37436876)
chr1 (109-277)||(4683462-4683630)
chr1 (109-277)||(12190265-12190434)
chr1 (109-277)||(20260174-20260343)
chr1 (109-277)||(5518592-5518760)
chr1 (113-276)||(14788539-14788703)
chr1 (111-277)||(9831960-9832127)
chr1 (109-277)||(8331829-8331998)
chr1 (111-277)||(9115652-9115819)
chr1 (111-277)||(25789578-25789745)
chr1 (163-300)||(48916164-48916302)
chr1 (161-278)||(49823036-49823154)
chr1 (109-277)||(52630588-52630757)
chr1 (109-277)||(2430312-2430480)
chr1 (109-278)||(13653666-13653835)
chr1 (161-277)||(32202453-32202570)
chr1 (161-277)||(51445219-51445336)
chr1 (111-277)||(39930272-39930439)
chr1 (109-277)||(32824736-32824906)
chr1 (161-278)||(48462345-48462462)
chr1 (170-277)||(5806425-5806533)
chr1 (161-277)||(6978585-6978702)
chr1 (109-277)||(36361598-36361766)
chr1 (109-277)||(50190853-50191021)
chr1 (162-300)||(47677436-47677574)
chr1 (161-301)||(30240804-30240942)
chr1 (161-277)||(6911300-6911417)
chr1 (163-273)||(35187275-35187386)
chr1 (111-241)||(38964769-38964900)
chr1 (195-277)||(1007586-1007668)
chr1 (109-278)||(29091486-29091650)
chr1 (195-276)||(37336618-37336699)
chr1 (157-293)||(29769309-29769447)
chr1 (109-291)||(46960430-46960611)
chr1 (169-278)||(1228026-1228135)
chr1 (161-278)||(52699606-52699723)
chr1 (195-277)||(47031674-47031757)
chr1 (162-254)||(52186170-52186262)
chr1 (161-278)||(24116475-24116592)
chr1 (210-278)||(38519250-38519318)
chr1 (111-210)||(47037340-47037439)
chr1 (195-286)||(49627381-49627472)
chr1 (195-290)||(3939304-3939397)
chr1 (139-276)||(13048384-13048525)
chr1 (139-276)||(13053381-13053522)
chr1 (209-300)||(19923652-19923743)
[»] chr4 (50 HSPs)
chr4 (109-278)||(55968088-55968258)
chr4 (109-277)||(39730381-39730550)
chr4 (111-277)||(8322063-8322230)
chr4 (109-278)||(34049685-34049855)
chr4 (109-277)||(6280009-6280178)
chr4 (109-277)||(13230077-13230246)
chr4 (109-277)||(32953341-32953510)
chr4 (109-277)||(27762987-27763156)
chr4 (109-277)||(31937957-31938126)
chr4 (109-277)||(41859135-41859303)
chr4 (109-277)||(42773766-42773935)
chr4 (111-277)||(25932259-25932426)
chr4 (109-278)||(27942554-27942724)
chr4 (109-278)||(45747884-45748053)
chr4 (109-277)||(48518979-48519148)
chr4 (111-277)||(35999504-35999671)
chr4 (111-277)||(48879143-48879310)
chr4 (109-278)||(25916121-25916291)
chr4 (109-277)||(935944-936113)
chr4 (109-277)||(18931571-18931740)
chr4 (161-277)||(48873839-48873956)
chr4 (139-271)||(38414032-38414164)
chr4 (111-277)||(18405324-18405490)
chr4 (111-277)||(39835397-39835564)
chr4 (111-277)||(40435718-40435885)
chr4 (111-277)||(43723082-43723249)
chr4 (111-277)||(45596086-45596253)
chr4 (161-277)||(27555245-27555361)
chr4 (109-277)||(50672993-50673161)
chr4 (111-277)||(34238044-34238211)
chr4 (161-277)||(41744361-41744478)
chr4 (111-277)||(23686605-23686772)
chr4 (161-300)||(36858203-36858341)
chr4 (161-277)||(39498643-39498760)
chr4 (161-277)||(39501982-39502099)
chr4 (161-277)||(36858517-36858633)
chr4 (157-278)||(38394724-38394845)
chr4 (111-277)||(47670180-47670347)
chr4 (166-287)||(52469507-52469628)
chr4 (160-278)||(47426381-47426492)
chr4 (157-278)||(51968596-51968715)
chr4 (161-255)||(30415743-30415837)
chr4 (161-278)||(48059873-48059990)
chr4 (161-263)||(18405586-18405688)
chr4 (161-271)||(18094073-18094183)
chr4 (161-277)||(44309579-44309695)
chr4 (210-278)||(32384583-32384651)
chr4 (161-300)||(37014525-37014663)
chr4 (161-276)||(7258783-7258898)
chr4 (217-278)||(26165180-26165241)
[»] chr8 (35 HSPs)
chr8 (109-277)||(38363895-38364064)
chr8 (109-277)||(16313595-16313764)
chr8 (109-277)||(18297926-18298095)
chr8 (157-277)||(26061958-26062079)
chr8 (109-277)||(35818512-35818681)
chr8 (109-277)||(37392634-37392803)
chr8 (157-277)||(10896352-10896473)
chr8 (109-277)||(25837725-25837894)
chr8 (111-277)||(7931053-7931220)
chr8 (109-278)||(3049822-3049992)
chr8 (109-277)||(18726707-18726877)
chr8 (109-278)||(19160829-19160998)
chr8 (161-277)||(38132878-38132995)
chr8 (109-277)||(32661021-32661191)
chr8 (109-278)||(21137220-21137389)
chr8 (121-277)||(26602037-26602194)
chr8 (109-277)||(41228802-41228970)
chr8 (109-277)||(6805711-6805879)
chr8 (157-277)||(7317191-7317310)
chr8 (109-278)||(29421577-29421746)
chr8 (161-277)||(42755681-42755798)
chr8 (109-277)||(35394205-35394373)
chr8 (111-277)||(12710459-12710626)
chr8 (109-277)||(1554442-1554611)
chr8 (139-277)||(5020611-5020748)
chr8 (109-278)||(31117618-31117781)
chr8 (109-278)||(43872054-43872223)
chr8 (109-278)||(15226779-15226947)
chr8 (195-277)||(40197227-40197310)
chr8 (158-301)||(41432529-41432675)
chr8 (109-278)||(33444713-33444880)
chr8 (161-278)||(37981926-37982043)
chr8 (167-278)||(12649950-12650061)
chr8 (209-278)||(16219130-16219199)
chr8 (109-202)||(14764019-14764111)
[»] chr3 (38 HSPs)
chr3 (109-277)||(26848836-26849005)
chr3 (109-277)||(8476396-8476565)
chr3 (109-277)||(9320536-9320705)
chr3 (109-277)||(46359766-46359935)
chr3 (109-277)||(19532959-19533127)
chr3 (111-277)||(1099013-1099179)
chr3 (109-277)||(28124524-28124693)
chr3 (109-278)||(31611073-31611243)
chr3 (109-277)||(6231589-6231758)
chr3 (109-277)||(33218001-33218170)
chr3 (109-277)||(53165813-53165981)
chr3 (114-277)||(10822811-10822974)
chr3 (111-277)||(20297607-20297774)
chr3 (109-277)||(40908080-40908248)
chr3 (111-277)||(11239210-11239377)
chr3 (111-277)||(48339847-48340014)
chr3 (109-277)||(20414553-20414722)
chr3 (161-277)||(47114997-47115114)
chr3 (157-277)||(24574381-24574502)
chr3 (157-278)||(26849282-26849403)
chr3 (161-277)||(44952122-44952239)
chr3 (161-277)||(43132297-43132413)
chr3 (161-277)||(29512414-29512530)
chr3 (111-277)||(43719020-43719182)
chr3 (166-300)||(12228400-12228534)
chr3 (161-271)||(28770350-28770460)
chr3 (109-278)||(31436011-31436180)
chr3 (161-278)||(32071260-32071376)
chr3 (161-293)||(40584410-40584541)
chr3 (123-300)||(24784000-24784177)
chr3 (161-277)||(1247042-1247156)
chr3 (161-278)||(27823088-27823205)
chr3 (209-278)||(6832111-6832180)
chr3 (210-278)||(13642885-13642952)
chr3 (195-275)||(18460669-18460748)
chr3 (195-263)||(21925624-21925692)
chr3 (109-277)||(33647791-33647959)
chr3 (161-278)||(12931080-12931198)
[»] chr5 (29 HSPs)
chr5 (109-278)||(29543103-29543273)
chr5 (109-277)||(4765648-4765817)
chr5 (109-277)||(8406708-8406877)
chr5 (109-277)||(11855743-11855912)
chr5 (109-277)||(22936000-22936169)
chr5 (111-277)||(6091529-6091696)
chr5 (109-277)||(12970618-12970787)
chr5 (161-277)||(14206961-14207078)
chr5 (109-277)||(18412023-18412192)
chr5 (109-277)||(27481171-27481340)
chr5 (121-277)||(32535751-32535908)
chr5 (109-278)||(19065593-19065763)
chr5 (109-277)||(8646479-8646647)
chr5 (109-277)||(28602370-28602538)
chr5 (111-277)||(36703688-36703855)
chr5 (161-277)||(555846-555963)
chr5 (165-278)||(1664544-1664657)
chr5 (109-278)||(6930455-6930623)
chr5 (109-278)||(27480824-27480992)
chr5 (161-278)||(20962404-20962521)
chr5 (109-241)||(42012267-42012399)
chr5 (168-277)||(17251628-17251736)
chr5 (161-278)||(35348664-35348781)
chr5 (217-277)||(36703596-36703656)
chr5 (161-293)||(31583202-31583331)
chr5 (161-278)||(43347035-43347152)
chr5 (229-286)||(28429534-28429591)
chr5 (195-278)||(26637195-26637279)
chr5 (168-278)||(40275902-40276012)
[»] chr6 (13 HSPs)
chr6 (109-277)||(2657514-2657683)
chr6 (109-277)||(1316833-1317001)
chr6 (109-277)||(16968739-16968908)
chr6 (161-277)||(7053718-7053835)
chr6 (161-277)||(8029117-8029234)
chr6 (109-277)||(14170829-14170996)
chr6 (164-277)||(10246259-10246373)
chr6 (109-241)||(7344171-7344304)
chr6 (161-277)||(18897735-18897852)
chr6 (161-278)||(345971-346090)
chr6 (195-301)||(8314684-8314790)
chr6 (161-206)||(6705905-6705950)
chr6 (249-278)||(21008208-21008237)
[»] scaffold0006 (2 HSPs)
scaffold0006 (109-277)||(201740-201908)
scaffold0006 (109-278)||(143427-143596)
[»] scaffold0189 (1 HSPs)
scaffold0189 (109-278)||(29040-29210)
[»] scaffold0702 (1 HSPs)
scaffold0702 (109-300)||(3653-3845)
[»] scaffold0662 (1 HSPs)
scaffold0662 (109-300)||(4257-4451)
[»] scaffold0238 (1 HSPs)
scaffold0238 (109-241)||(23384-23516)


Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 72 - 625
Target Start/End: Original strand, 43569736 - 43570272
Alignment:
Q  72 tgatggcatattatactatgttacttagactgatggcattttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtggg 171  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  43569736 tgatggcatattatactatgttacttagactgatgccattttattcccgggtataaaatattcttcgaaatataaaaatttacctaagaaaaagggtggg 43569835  T
Q  172 aataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacat 271  Q
    |||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||    
T  43569836 aataaaattcacatgaggatgtaaataaattcataaataattatctattataatccctatttttatgatttctaaaaatattataaagttaatcaaacat 43569935  T
Q  272 at-tttttgttaaatatctt-gaataaaatttgatgacattatttttgtatatgtgtattatctttttggtgacattaagagtttggtgacattatttat 369  Q
    || ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||                 ||||||||||||||||    
T  43569936 atatttttgttaaataccttagaataaaatttgatgacattatttttatatatgtgtattatctttt-----------------tggtgacattatttat 43570018  T
Q  370 gacaggaaaaactgtattatcnnnnnnnatgtaaaccttagtgtctttttaagaggtgtaaaacaaattttgatatatgtgtctttttatgcttgcatat 469  Q
    |||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43570019 gacaggaaaaactgtattgtctttttttatgtaaaccttagtgtctttttaagaggtgtaaaacaaattttgatatatgtgtctttttatgcttgcatat 43570118  T
Q  470 gaggnnnnnnnnatttataaaatgttaacaaaaaatattttttctctggtggccctaaaacaagagttttagcaaccatgctattgggtcgaccttgctc 569  Q
    ||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43570119 gaggttttttt--tttataaaatgttaacaaaaaatattttttctctggtggccctaaaacaagagttttagcaaccatgctattgggtcgaccttgctc 43570216  T
Q  570 acattcttagaaaagtagtcatattttcaattattgtccaattaatatatcttatt 625  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43570217 acattcttagaaaagtagtcatattttcaattattgtccaattaatatatcttatt 43570272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 40212872 - 40212703
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||| ||||||||||| ||| |  ||||| ||||| ||  | ||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  40212872 attttattccggggtataaaatgttcctgggaatagaaaaaatttcccaagaaaaagggtgggaataaagttctcatggagatgggaataaattcataaa 40212773  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  |||||||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  40212772 tagtttatctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 40212703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 110 - 277
Target Start/End: Original strand, 37534192 - 37534359
Alignment:
Q  110 ttttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaat 209  Q
    ||||||| ||||||||||||||||  |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  37534192 ttttatttccgggtataaaatatttatgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgtgaataaattcataaat 37534291  T
Q  210 aattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    | |||  |||||||||||||||| |||| ||| || | ||||||||||||||||||||||||||||||    
T  37534292 agttacttattataatccctattattatagttcctaagaatattataaagttaaccaaacatattttt 37534359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 9814302 - 9814471
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  9814302 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaagaaaaagggtgggaataaagttctcatggagatgggaataaattcataaa 9814401  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||||||||||||||| |||||||||||||| ||   |||||||||||| ||| |||||||||||||    
T  9814402 tagtttatctattataatctctatttttatggttcctaggaatattataaagctaatcaaacatattttt 9814471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 34930557 - 34930724
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  34930557 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaagaaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 34930656  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || |||||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  34930657 gtttatctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 34930724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 8419677 - 8419846
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||| |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  8419677 attttattcccaggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 8419776  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  8419777 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 8419846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 25098052 - 25097883
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||| ||||||||||||| ||| |  ||||| ||||| ||  ||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  25098052 attttatttccgggtataaaatgttcctgggaatagaaaaaatttcctaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 25097953  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||| ||||||||| ||   |||||||||||| |||||||||||||||||    
T  25097952 tagtttacctattataatccctatatttatggttcctaggaatattataaagctaaccaaacatattttt 25097883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 35488277 - 35488446
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| |||||||||||||||||||||  |||||||||  ||||||||||||||    
T  35488277 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcctatggagatgggaataaattcataaa 35488376  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  35488377 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 35488446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 38396454 - 38396623
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| |||| |||||||||||||||| || |||||||  ||||||||||||||    
T  38396454 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaatggtgggaataaagttcccacggagatgggaataaattcataaa 38396553  T
Q  209 taattat-ctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||||| | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  38396554 taattttcctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 38396623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 45045609 - 45045440
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||| ||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  45045609 attttatttccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 45045510  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  45045509 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 45045440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 45265136 - 45265305
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||| ||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  45265136 attttatttccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgagaataaattcataaa 45265235  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  45265236 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 45265305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 45448925 - 45448756
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||||||||||||||||||||||||| ||| |||| |  ||||||||||||||    
T  45448925 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaagaaaaagggtgggaataaagttcccatagagaggggaataaattcataaa 45448826  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  |||||||||||||||| ||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  45448825 tagtttatctattataatccttatttttatggttcctaggaatattataaagctaaccaaacatattttt 45448756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 45723132 - 45722963
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||| ||||||||| |||||  ||||| ||||||||  | |||||||| |||||||||||||||| |||| | ||  |||||||||||||||    
T  45723132 attttattcccgagtataaaatgttcttgggaatagaaaaattttcccaagaaaaatggtgggaataaagttcccatgaaaatagaaataaattcataaa 45723033  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || ||| |||||||||||| |||||||||| |||||   ||||||||||||||||  |||||||||||||    
T  45723032 tagttacctattataatccatatttttatgatttctaggaatattataaagttaattaaacatatttttt 45722963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 9947078 - 9947248
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  | ||||||||||||    
T  9947078 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgagattaaattcataaa 9947177  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    ||  ||| |||||| ||||||||||||||||||| ||   |||||||||||| ||||||||||||||||||    
T  9947178 tagtttacctattacaatccctatttttatggttcctatgaatattataaagctaaccaaacatatttttt 9947248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 156 - 277
Target Start/End: Original strand, 28904321 - 28904443
Alignment:
Q  156 taagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata-attatctattataatccctatttttatggtttcttaaaatatta 254  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||  ||| |||||||||||| ||||||||||||| ||   |||||||    
T  28904321 taagaaaaagggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctattataatccatatttttatggttcctaggaatatta 28904420  T
Q  255 taaagttaaccaaacatattttt 277  Q
    |||||||||||||||||||||||    
T  28904421 taaagttaaccaaacatattttt 28904443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 38544177 - 38544008
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatct-aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataa 207  Q
    |||||||||||||||||||||| ||  |  ||||| ||||| || ||| |||||||| |||||||||||||||| ||||||||||  |||||||||||||    
T  38544177 attttattcccgggtataaaatgtttctgggaatagaaaaaatt-tctcaagaaaaatggtgggaataaagttcccatggagatgagaataaattcataa 38544079  T
Q  208 ataatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||| || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  38544078 atagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 38544008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 44566028 - 44565859
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||  |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  44566028 attttattcccgggtataaaatgtttctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgagaataaattcataaa 44565929  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||| ||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  44565928 tagtttacctattataatccatatttttatggttcctaggaatattataaagctaaccaaacatattttt 44565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 48341345 - 48341177
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||||| |||||||| ||| |  ||||| ||||| ||  | ||| |||| |||||||||||||||| ||||||||||  ||||||||||||||    
T  48341345 attttattcccgg-tataaaatgttcctgggaatagaaaaaatttcccaaggaaaatggtgggaataaagttcccatggagatgggaataaattcataaa 48341247  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||    
T  48341246 tagtttacctattataatccctatttttatggttcctaggaatattataaagttaaccaaacatattttt 48341177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 111 - 278
Target Start/End: Complemental strand, 39554164 - 39553996
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| | |||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  39554164 tttattccttggtataaaatgttcctgagaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 39554065  T
Q  211 -attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
      ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||| |||||||||    
T  39554064 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaaaatatttttt 39553996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 638 - 743
Target Start/End: Original strand, 43570340 - 43570445
Alignment:
Q  638 ataccttaatgtatgtattaaacatattttcattaacgtaacactataaccactcttttgtaaatnnnnnnngaagatcatttaatttgatttgaagttt 737  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  43570340 ataccttaatgtgtgtattaaatatattttcattaacgaaacactataaccactcttttgtaaataaaagaagaagatcatttaatttgatttgaagttt 43570439  T
Q  738 tgattg 743  Q
    ||||||    
T  43570440 tgattg 43570445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 11329974 - 11329807
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  11329974 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 11329875  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  11329874 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 11329807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 41632454 - 41632621
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| |||||  ||||| ||||| ||  | ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  41632454 tttattccttggtataaaatgttcttaggaatagaaaaaatttcccaagaaaaagggtgggaataaagttcccatggagatgagaataaattcataaata 41632553  T
Q  211 -attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
      ||| |||||||||||| |||||||||||||  |   |||||||||||| |||||||||||||||||    
T  41632554 gtttacctattataatccatatttttatggttcataggaatattataaagctaaccaaacatattttt 41632621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 48160713 - 48160830
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    |||| |||||||||||||||| ||||||||||  ||||||||||||||||||| | |||||||||||||||||||||||||| ||   ||||||||||||    
T  48160713 aaaatggtgggaataaagttcccatggagatgggaataaattcataaataatttacctattataatccctatttttatggttcctaggaatattataaag 48160812  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  48160813 ctaaccaaacatattttt 48160830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 48314105 - 48313936
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||||| |||||||| ||  |  ||||| ||||| ||  | ||| |||| |||||||||||||||| ||||||||||  |||||||| |||||    
T  48314105 attttattcccggatataaaatgtttctgggaatagaaaaaatttcccaaggaaaatggtgggaataaagttcccatggagatgggaataaatttataaa 48314006  T
Q  209 taattatc-tattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || || ||||||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||    
T  48314005 tagttttcctattataatccctatttttatggttccttggaatattataaagctaaccaaacatattttt 48313936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 30686080 - 30686248
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| |||||    || ||| |||| ||||||||||||||||  | |||||||  ||||||||||||||    
T  30686080 attttattcccgggtataaaatgttcatgggaatagaaaaaaaattccaaggaaaaaggtgggaataaagttcctagggagatgggaataaattcataaa 30686179  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || |||  |||||||||| |||||||||||||| ||   ||||||||||||||||||||||||||||||    
T  30686180 tagttacttattataatcgctatttttatggttcctaggaatattataaagttaaccaaacatattttt 30686248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 27248276 - 27248107
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||| |||||||||| ||  |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  27248276 attttattcccaggtataaaatgttactgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 27248177  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||| |||  |   |||||||||||| |||||||||||||||||    
T  27248176 tagtttacctattataatccctatttttatagttcataggaatattataaagctaaccaaacatattttt 27248107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 33378765 - 33378648
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    |||| |||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  33378765 aaaatggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 33378666  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  33378665 ctaaccaaacatattttt 33378648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 41684162 - 41684279
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||| ||||||||||||||| |||||||||| ||||||||| |||  || ||| ||||||||||| |||||||||||||| ||  |||||||||||| |    
T  41684162 aaaagagtgggaataaagttctcatggagatgaaaataaatttatatgtagttacctattataatctctatttttatggttcctataaatattataaaat 41684261  T
Q  261 taaccaaacatatttttt 278  Q
    ||||||||||||||||||    
T  41684262 taaccaaacatatttttt 41684279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 43949176 - 43949059
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| |||| |||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  43949176 aaaagggtgggaataaagttcccatgaagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 43949077  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  43949076 ctaaccaaacatattttt 43949059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 25045705 - 25045837
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||| ||||||||| ||| |  ||||| ||||||||   |||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  25045705 attttattcccgagtataaaatgttcctgggaatagaaaaattttcgtaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 25045804  T
Q  209 taattatctattataatccctatttttatggtt 241  Q
    ||||||  ||||||||||| |||||| ||||||    
T  25045805 taattacatattataatccatattttcatggtt 25045837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 111 - 278
Target Start/End: Original strand, 27419314 - 27419482
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  27419314 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 27419413  T
Q  211 -attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
      ||| ||||||||||| |||||||||||||  ||   |||||||||||| ||||||||||||||||||    
T  27419414 gtttacctattataatctctatttttatggtccctaggaatattataaagctaaccaaacatatttttt 27419482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 27213945 - 27214112
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| |||||||||||||||||||||  |||||||||  ||||||||||||||||    
T  27213945 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcctatggagatgagaataaattcataaata 27214044  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||| ||||||||||| ||   |||||||||||| |||||||||||||||||    
T  27214045 gtttacctattataatccctgtttttatggttcctaggaatattataaagctaaccaaacatattttt 27214112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 44820235 - 44820068
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| || ||| | ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  44820235 tttattccttggtataaaatgttcctcggaacagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 44820136  T
Q  211 -attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
      ||| |||||||| ||||||||||||||||| ||   |||||||||||| |||||||| ||||||||    
T  44820135 gtttacctattatagtccctatttttatggttcctaggaatattataaagctaaccaaatatattttt 44820068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 18824128 - 18824007
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| || ||  ||||| ||||||||  | ||| |||| |||||||||||||||| ||||||||||  ||||||||||||||    
T  18824128 attttattcccgggtataaaatgtttttgggaatagaaaaattttcccaaggaaaaaggtgggaataaagttc-catggagatgggaataaattcataaa 18824030  T
Q  209 taattatctattataatccctat 231  Q
    |||||| ||||||||||||||||    
T  18824029 taattacctattataatccctat 18824007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 109 - 301
Target Start/End: Complemental strand, 45440890 - 45440699
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||| ||||||||| ||| || ||||||||||||||  | ||  |||   ||||||||||||||| ||||||||||  || ||| ||||  |    
T  45440890 attttattcccgagtataaaatgttcctcggaatataaaaattttcccaaagaaagtagtgggaataaagttctcatggagatgggaaaaaaatcatgta 45440791  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttttgttaaatatctt-gaataaaattt 301  Q
    |||||| ||||||||||||||| ||||| |||| |||  |||||||||| ||||| ||||||| |||||  ||||||||||| |||||||||||    
T  45440790 taattacctattataatccctagttttaaggttacttggaatattataatgttaatcaaacatcttttt--ttaaatatcttggaataaaattt 45440699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 25924777 - 25924894
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||| ||||||  |||||||||||||||| || | |||||||||||| ||||||||||||| ||   ||||||||||||    
T  25924777 aaaagggtgggaataaagttcccatagagatgagaataaattcataaatagtttacctattataatccatatttttatggttcctaggaatattataaag 25924876  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  25924877 ctaaccaaacatattttt 25924894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 109 - 301
Target Start/End: Complemental strand, 11000685 - 11000487
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||  | ||  ||||||||||||||||||||| |||| | |||  ||||||||||||      
T  11000685 attttattcccgggtataaaatattcttgggaatagaaaaattttcccaaagaaaagggtgggaataaagttcccatgcatatgagaataaattcatatg 11000586  T
Q  209 taattatctattataatccctatttttatggt------ttctta-aaatattataaagttaaccaaacatattttttgttaaatatctt-gaataaaatt 300  Q
     | |   |||||||||||||||||||||||||      ||||||  |||||||||||||||||| ||||||  |||| ||||||||||| ||||||||||    
T  11000585 aagtcgcctattataatccctatttttatggttcttacttcttaggaatattataaagttaacctaacata--ttttcttaaatatcttggaataaaatt 11000488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 111 - 259
Target Start/End: Original strand, 16825444 - 16825593
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  16825444 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 16825543  T
Q  211 -attatctattataatccctatttttatggtttcttaaaatattataaag 259  Q
      ||| |||||||||||||||||||||||||| ||   ||||||||||||    
T  16825544 gtttacctattataatccctatttttatggttcctaggaatattataaag 16825593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 168 - 278
Target Start/End: Original strand, 6656618 - 6656728
Alignment:
Q  168 tgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttctta-aaatattataaagttaacca 266  Q
    |||||||||||||| ||||||||||  |||||| ||||||||| ||| |||||||||||  ||||||| ||| |||||| |||||||||||||||||| |    
T  6656618 tgggaataaagttcccatggagatgggaataaagtcataaatagttacctattataatctatatttttttgg-ttcttagaaatattataaagttaacaa 6656716  T
Q  267 aacatatttttt 278  Q
    ||||||||||||    
T  6656717 aacatatttttt 6656728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 31921867 - 31921982
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||||||||||||||||||| ||| ||||||  |||||||||||| ||| |   ||||||||||  |||||||||||||| ||  ||||||||||||||    
T  31921867 aaaagggtgggaataaagttcccatagagatgagaataaattcatatatagtc--ctattataatgtctatttttatggttcctagaaatattataaagt 31921964  T
Q  261 taaccaaacatatttttt 278  Q
    |||||| |||||||||||    
T  31921965 taaccatacatatttttt 31921982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 43569702 - 43569751
Alignment:
Q  6 gtccaagaatatgagatataccggtaacttagactgatggcatattatac 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43569702 gtccaagaatatgagatataccggtaacttagactgatggcatattatac 43569751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 300
Target Start/End: Original strand, 5543268 - 5543410
Alignment:
Q  157 aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattata 256  Q
    ||||||||  ||||||||||||||| |||| |||||  || ||||||||   |||||| |||||||||||| ||||||||||||| |    || ||||||    
T  5543268 aagaaaaatagtgggaataaagttcccatgaagatgggaacaaattcatgtgtaattacctattataatccatatttttatggttcccgggaacattata 5543367  T
Q  257 aagttaaccaaacatattttttgttaaatatcttgaataaaatt 300  Q
    | ||||| ||||||| ||||||  |||||| |||||||||||||    
T  5543368 atgttaagcaaacatctttttt-ctaaataccttgaataaaatt 5543410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 152 - 278
Target Start/End: Original strand, 38528837 - 38528962
Alignment:
Q  152 tatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaata 251  Q
    |||| |||||||||| || ||||||||||| |||| |||||  |||||||| ||   |||||   ||||||||||||||||||||  |||||| | ||||    
T  38528837 tatcaaagaaaaagg-tgagaataaagttctcatgaagatgagaataaatttatgtgtaattgcatattataatccctatttttaaagtttctcagaata 38528935  T
Q  252 ttataaagttaaccaaacatatttttt 278  Q
    |||||| ||||||||||||| ||||||    
T  38528936 ttataatgttaaccaaacatttttttt 38528962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 43446023 - 43446139
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    |||| |||||||||||||||| ||||||||||  |||||| | ||   |||||| |||||||| | ||||| ||||  |||  ||| |||||||||| ||    
T  43446023 aaaatggtgggaataaagttctcatggagatgagaataaaattatgtgtaattacctattatatttcctatctttaatgttctttagaatattataatgt 43446122  T
Q  261 taaccaaacatattttt 277  Q
    |||||||||||||||||    
T  43446123 taaccaaacatattttt 43446139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 6656362 - 6656457
Alignment:
Q  160 aaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattat 255  Q
    ||||||||||| |||||||||  ||||||||||  |||||| ||||||||| ||| |||||||||||  ||||||| ||||| || | ||||||||    
T  6656362 aaaaagggtggaaataaagtttccatggagatgggaataaaatcataaatagttacctattataatctgtatttttttggttcctaagaatattat 6656457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 278
Target Start/End: Original strand, 40385773 - 40385885
Alignment:
Q  166 ggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttctta-aaatattataaagttaac 264  Q
    |||||||||||||||| |||  ||||| ||||||| ||||   ||| || |||||||||||| ||||||||||| ||||||  |||||||||| ||||||    
T  40385773 ggtgggaataaagttcccattaagatggaaataaactcatgtgtaactacctattataatccatatttttatgg-ttcttaggaatattataatgttaac 40385871  T
Q  265 caaacatatttttt 278  Q
    |||| || ||||||    
T  40385872 caaatatctttttt 40385885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 22156320 - 22156400
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtt 241  Q
    |||||||| |||||||||||| ||| ||||||  ||||| ||||||  ||||||  ||||||||||| |||||||||||||    
T  22156320 aaaagggtaggaataaagttctcatagagatgagaataagttcatatgtaattacatattataatccatatttttatggtt 22156400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 22212235 - 22212315
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtt 241  Q
    |||||||| |||||||||||| ||| ||||||  ||||| ||||||  ||||||  ||||||||||| |||||||||||||    
T  22212235 aaaagggtaggaataaagttctcatagagatgagaataagttcatatgtaattacatattataatccatatttttatggtt 22212315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 248 - 277
Target Start/End: Complemental strand, 18824005 - 18823976
Alignment:
Q  248 aatattataaagttaaccaaacatattttt 277  Q
    ||||||||||||||||||||||||||||||    
T  18824005 aatattataaagttaaccaaacatattttt 18823976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 3e-47; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 45409233 - 45409065
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||| ||||||||||||||||| |  ||||| ||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  45409233 attttattaccgggtataaaatattcatgggaatagaaaaatttacccaaggaaaagggtgggaataaagttcccatggagatggaaataaattcataaa 45409134  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || ||| |||||||||||| ||||||||||||| ||  |||||||||||| |||| |||||||||||||    
T  45409133 tagttacctattataatccttatttttatggttcctagaaatattataaatttaatcaaacatattttt 45409065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 27358051 - 27358219
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||| |||||||||||||| |  ||||| ||||||||| | ||| ||||||||||||||||||||| ||| ||||||  ||||||||||||||    
T  27358051 attttattcccaggtataaaatattcatgggaatagaaaaatttacccaaggaaaagggtgggaataaagttcccatagagatgagaataaattcataaa 27358150  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || ||| |||||||||||| ||||||||||||| ||   ||||||||||| |||| |||||||||||||    
T  27358151 tagttacctattataatccttatttttatggttcctaggaatattataaatttaatcaaacatattttt 27358219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 346433 - 346602
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  346433 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 346532  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  346533 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 346602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 4559542 - 4559373
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  4559542 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 4559443  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  4559442 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 4559373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 5770198 - 5770367
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | |||||||| |||||||||||||||| |||| |||||  ||||||||||||||    
T  5770198 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaagaaaaatggtgggaataaagttcccatgaagatgggaataaattcataaa 5770297  T
Q  209 taattat-ctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||||| | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  5770298 taattttcctattataatccctatttttatggttgctaggaatattataaagctaaccaaacatattttt 5770367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 11071588 - 11071419
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||||||||||||||||||||||||| |||| |||||  ||||||||||||||    
T  11071588 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaagaaaaagggtgggaataaagttcccatgaagatgggaataaattcataaa 11071489  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||| ||||||||||||| ||   ||||||||||||||||||||||||||||||    
T  11071488 tagtttacctattataatccatatttttatggttcctaggaatattataaagttaaccaaacatattttt 11071419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 28311785 - 28311953
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||  ||  | ||| ||||||||||||||||||||| | ||||||||  ||||||||||||||    
T  28311785 attttattcccgggtataaaatgttcctgggaatagaaaatctttcccaaggaaaagggtgggaataaagttcccgtggagatgggaataaattcataaa 28311884  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || ||| ||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  28311885 tagttacctattataatccctattttcatggttcctaggaatattataaagttaaccaaacatattttt 28311953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 2050849 - 2050680
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  2050849 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 2050750  T
Q  209 taattat-ctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||||| | |||||||||| |||||||||||| || ||   |||||||||||| |||||||||||||||||    
T  2050749 taattttcctattataattcctatttttatgattcctaggaatattataaagctaaccaaacatattttt 2050680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 6171774 - 6171605
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| |||| |||||||||||||||| ||||||||||  ||||||||||||||    
T  6171774 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaatggtgggaataaagttcccatggagatgggaataaattcataaa 6171675  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  6171674 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 6171605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 17965966 - 17965797
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | | ||||||||||||||||||||||| ||| ||||||  ||||||||||||||    
T  17965966 attttattcccgggtataaaatgttcctaggaatagaaaaaatttcccatgaaaaagggtgggaataaagttcccatagagatgggaataaattcataaa 17965867  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  17965866 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 17965797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 42674749 - 42674918
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||| ||||||| ||| |  ||||| ||||| ||  | ||||||||||||||||||||||||| |||||| |||  ||||||||||||||    
T  42674749 attttattcccgggcataaaatgttcctgggaatagaaaaaatttcccaagaaaaagggtgggaataaagttcccatggaaatgggaataaattcataaa 42674848  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  42674849 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 42674918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 37233412 - 37233244
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||   |  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  37233412 attttattcccgggtataaaatgttcctgggaatagaaaatcgttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 37233313  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || ||| |||||||||||| |||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  37233312 tagttacctattataatccttattttcatggttcctaggaatattataaagttaaccaaacatattttt 37233244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 638576 - 638408
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||| ||||||||||||| ||| |  ||||||||||| ||  | ||| ||||||| ||||||||||||| ||||||||||  ||||||||||||||    
T  638576 attttatttccgggtataaaatgttcctaggaatataaaaaatttcccaaggaaaaggg-gggaataaagttctcatggagatgagaataaattcataaa 638478  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  638477 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 638408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 161 - 300
Target Start/End: Complemental strand, 3902387 - 3902248
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    |||| |||||||||||||||| | ||||||||  |||||||||||| ||| ||| |||||||||||||||||||||||||| ||   |||||||||||||    
T  3902387 aaaatggtgggaataaagttcccttggagatgagaataaattcatatatagttacctattataatccctatttttatggttcctgtgaatattataaagt 3902288  T
Q  261 taaccaaacatattttttgttaaatatctt-gaataaaatt 300  Q
    ||||||||||||||||||  |||||||||| ||||||||||    
T  3902287 taaccaaacatatttttt-ctaaatatcttggaataaaatt 3902248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 41750510 - 41750343
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  41750510 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 41750411  T
Q  211 -attatctattataatccctatttttatggtttctta-aaatattataaagttaaccaaacatattttt 277  Q
      ||| |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  41750410 gtttacctattataatccctatttttatgg-ttcttaggaatattataaagttaaccaaacatattttt 41750343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 13760898 - 13760780
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  13760898 aaaagggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 13760799  T
Q  260 ttaaccaaacatatttttt 278  Q
     ||||||||||||||||||    
T  13760798 ctaaccaaacatatttttt 13760780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 109 - 291
Target Start/End: Original strand, 18713745 - 18713926
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| |||||   |||| ||||| ||  | ||  ||||||||||||||||||||| |||||||||| ||||||||| |||      
T  18713745 attttattcccgggtataaaatgttcttggtaataaaaaaaatttcccaaagaaaagggtgggaataaagttcccatggagatggaaataaatttatacg 18713844  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttttgttaaatatcttg 291  Q
    || | | ||||||||| ||||||||||||||||  |   |||||||||||||||||||||||||||||||  |||||||||||    
T  18713845 tagtaacctattataaaccctatttttatggttcataggaatattataaagttaaccaaacatatttttt-ctaaatatcttg 18713926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 1988294 - 1988126
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatct-aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataa 207  Q
    |||||||| |||| |||||||| |||||  ||||| |||||||| ||| ||| ||||||||||||||||||||  ||||||||||  ||||||||| ||     
T  1988294 attttatttccggatataaaatgttcttgggaatagaaaaattt-tctcaaggaaaagggtgggaataaagtttccatggagatgagaataaattcttat 1988196  T
Q  208 ataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||| ||| |||||||||||||||||||| ||||| |    ||||||||||||||||||||||||||||||    
T  1988195 atagttacctattataatccctatttttttggttccaaggaatattataaagttaaccaaacatattttt 1988126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 2521658 - 2521489
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||| ||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||| |||  |||||||||  ||||||||||||||    
T  2521658 attttattcctgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaaattcctatggagatgggaataaattcataaa 2521559  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  2521558 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 2521489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 20426571 - 20426740
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||| ||||| |||||||| ||| |  ||||| |||| |||  | ||| ||||||||| |||||||||||  |||||||||  ||||||||||||||    
T  20426571 attttatccccggatataaaatgttcctgggaatagaaaatttttcccaaggaaaagggtgagaataaagttcctatggagatgagaataaattcataaa 20426670  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || ||| ||||||||||| ||||||||||||||  |   |||||||||||||||||||||||||||||||    
T  20426671 tagttacctattataatctctatttttatggttggtaggaatattataaagttaaccaaacatatttttt 20426740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 26310198 - 26310081
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| || | ||||||||||||    
T  26310198 aaaagggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaagaatattataaag 26310099  T
Q  260 ttaaccaaacatattttt 277  Q
     ||||||| |||||||||    
T  26310098 ctaaccaaccatattttt 26310081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 39995279 - 39995396
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    |||| |||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  39995279 aaaatggtgggaataaagttcccatggagatgagaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 39995378  T
Q  260 ttaaccaaacatattttt 277  Q
    ||||||||||||||||||    
T  39995379 ttaaccaaacatattttt 39995396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 40950949 - 40951116
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| |||||  | || ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  40950949 tttattccttggtataaaatgttcctgggaatacaaaaaaatttccaaggaaaagggtgggaataaagttcccatggagatgagaataaattcataaata 40951048  T
Q  211 -attatctattataatccctatttttatggtttctta-aaatattataaagttaaccaaacatattttt 277  Q
      ||| |||||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||    
T  40951049 gtttacctattataatccctatttttatgg-ttcttaggaatattataaagctaaccaaacatattttt 40951116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 9733936 - 9734103
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  9733936 tttattccttggtataaaatgttcctgggaataaaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 9734035  T
Q  211 -attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
      ||| |||||||||||||||||||||||||| ||   ||||||||||||  ||||||||||||||||    
T  9734036 gtttacctattataatccctatttttatggttcctaggaatattataaagccaaccaaacatattttt 9734103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 23944094 - 23943976
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataa-ttatctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||| |||||||||||  ||||||||||||| ||   ||||||||||||    
T  23944094 aaaagggtgggaataaagttcccatggagatgagaataaattcataaataatttacctattataatctttatttttatggttcctaggaatattataaag 23943995  T
Q  260 ttaaccaaacatatttttt 278  Q
     ||||||||||||||||||    
T  23943994 gtaaccaaacatatttttt 23943976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 14777586 - 14777755
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| |||| |||||||||||| |||  |||||||||  ||||||||||||||    
T  14777586 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaatggtgggaataaaattcctatggagatgggaataaattcataaa 14777685  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||| ||| ||   |||||||||||| |||||||||||||||||    
T  14777686 tagtttacctattataatccctatttttatagttcctaggaatattataaagctaaccaaacatattttt 14777755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 14832793 - 14832624
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||| |||||||||| |||||  ||||| ||||||||  | ||  ||||||||||||||||||||| ||| ||||||  |||||||| |||      
T  14832793 attttattcccaggtataaaatgttcttgggaatagaaaaattttcccaaagaaaagggtgggaataaagttctcattgagatgagaataaatttatacg 14832694  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    |||||  |||||||||||| |||||||||||||  |   |||||||||||| ||||||||||||||||||    
T  14832693 taatttcctattataatccttatttttatggttcataggaatattataaagctaaccaaacatatttttt 14832624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 21737548 - 21737665
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    |||| |||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  21737548 aaaatggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 21737647  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  21737648 ctaaccaaacatattttt 21737665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 34356788 - 34356956
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| |||| |||||||||||||||| || ||| |||  ||||||||||||||    
T  34356788 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaatggtgggaataaagttcccacgga-atgggaataaattcataaa 34356886  T
Q  209 taattatc-tattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||||| || |||||||||| |||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  34356887 taattttcctattataatctctatttttatggttcctaggaatattataaagctaaccaaacatattttt 34356956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 37533935 - 37533802
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||| ||||||||||| ||| |  ||||| ||||| ||  | || |||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  37533935 attttattcctgggtataaaatgttccttggaatagaaaaaatttcccaaaaaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 37533836  T
Q  209 taa-ttatctattataatccctatttttatggtt 241  Q
    ||| ||| ||||||||||||||||||||||||||    
T  37533835 taatttacctattataatccctatttttatggtt 37533802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 41729270 - 41729387
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  41729270 aaaagggtgggaataaagtttccatggagatgagaataaattcataaatagtttacctattataatccctatttttatggttactaggaatattataaag 41729369  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  41729370 ctaaccaaacatattttt 41729387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 37192503 - 37192336
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||  |||||||||   ||||||||||||||||    
T  37192503 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagtttccatggagattggaataaattcataaata 37192404  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  37192403 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 37192336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 45694171 - 45694002
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||  ||| |  ||||| |||| |||  | ||| ||||||||||||||||||||| |||||||||| |||||||||||| |     
T  45694171 attttattcccgggtataaaacgttcatgggaatagaaaatttttcccaaggaaaagggtgggaataaagttcccatggagatgaaaataaattcatgag 45694072  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    |||||  | |||||||| ||||||||||||||| |    |||||||||| ||||| ||||||| ||||||    
T  45694071 taatttgcaattataattcctatttttatggttcccaggaatattataatgttaagcaaacatttttttt 45694002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 160 - 301
Target Start/End: Complemental strand, 13790222 - 13790080
Alignment:
Q  160 aaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||| |||||||||||||||| ||||||||||  |||||| ||||  |  |||| ||||||||||||||||||||| |||| |||  |||||||||| |    
T  13790222 aaaaacggtgggaataaagttcccatggagatgggaataaaatcatgtaatattacctattataatccctatttttaaggttccttggaatattataatg 13790123  T
Q  260 ttaaccaaacatattttttgttaaatatctt-gaataaaattt 301  Q
    |||| ||||||| |||||| ||||||| ||| |||||||||||    
T  13790122 ttaatcaaacatctttttttttaaataccttagaataaaattt 13790080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 7007515 - 7007398
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttctta-aaatattataaag 259  Q
    |||| |||||||||||| ||  ||||||||||  ||||||||||||  || ||| |||||||| |||||||||| |||| ||||||  ||||||||||||    
T  7007515 aaaatggtgggaataaaattaccatggagatgagaataaattcatatgtagttacctattatactccctattttaatgg-ttcttaggaatattataaag 7007417  T
Q  260 ttaaccaaacatatttttt 278  Q
    |||||||||||||||||||    
T  7007416 ttaaccaaacatatttttt 7007398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 165 - 278
Target Start/End: Complemental strand, 4875703 - 4875590
Alignment:
Q  165 gggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaac 264  Q
    ||||||||||||||||| |||| |||||  ||||||||||||  ||||||  ||||||||||||||||||||||||| ||    ||||||||| |||||     
T  4875703 gggtgggaataaagttcccatgaagatgagaataaattcatatgtaattacatattataatccctatttttatggttcctcggcatattataatgttaag 4875604  T
Q  265 caaacatatttttt 278  Q
     |||||||||||||    
T  4875603 aaaacatatttttt 4875590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 162 - 278
Target Start/End: Original strand, 41298059 - 41298175
Alignment:
Q  162 aaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagtt 261  Q
    |||||||| ||||||||||| |||| |||||  |||| ||||||  ||||||| ||||||||||| ||||| |||||||| |||  |||||||||| |||    
T  41298059 aaagggtgtgaataaagttctcatgaagatgagaatatattcatttataattacctattataatctctattcttatggttccttggaatattataatgtt 41298158  T
Q  262 aaccaaacatatttttt 278  Q
    || ||||||| ||||||    
T  41298159 aaacaaacatctttttt 41298175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 13539593 - 13539482
Alignment:
Q  167 gtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaacca 266  Q
    ||||||||||||||| |||| | |||  |||| ||||||   ||||||||||||||||||| |||||||||||||||| | |||| ||||| ||||| ||    
T  13539593 gtgggaataaagttcccatgaacatgggaatagattcatgtgtaattatctattataatccttatttttatggtttctgagaatactataatgttaagca 13539494  T
Q  267 aacatatttttt 278  Q
    ||||| ||||||    
T  13539493 aacatctttttt 13539482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 40570003 - 40569831
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaag---ttcacatggagatgtaaataaattcat 205  Q
    |||||||||||||||||||||| ||| |  ||||| |||| |||  | ||  |||| |||||||||||||   ||| |||||| |||  |||||| ||||    
T  40570003 attttattcccgggtataaaatgttcctgggaatagaaaatttttcccaaagaaaatggtgggaataaagaagttcccatggaaatgggaataaaatcat 40569904  T
Q  206 aaataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
      ||||||| ||||||||||||||||||||  |||| |||  || ||||||| ||||||||||||| ||||||    
T  40569903 gtataattacctattataatccctatttttgaggttccttggaacattataatgttaaccaaacatctttttt 40569831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 166 - 276
Target Start/End: Original strand, 5002981 - 5003091
Alignment:
Q  166 ggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaacc 265  Q
    |||||||||||||||  |||| |||| | ||| |||||||   ||| || |||||||||||| ||||||||||||| || ||||||||| || |||||||    
T  5002981 ggtgggaataaagtttccatgaagatatgaatcaattcatgtgtaactacctattataatccatatttttatggttcctgaaaatattaaaatgttaacc 5003080  T
Q  266 aaacatatttt 276  Q
    |||||| ||||    
T  5003081 aaacatctttt 5003091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 271
Target Start/End: Complemental strand, 37851788 - 37851678
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    |||| |||| ||||||||||| |||| |||||  |||||||||||   ||| || |||||||||| | |||||||||| || || |||||||||||| ||    
T  37851788 aaaatggtgagaataaagttcccatgaagatgagaataaattcatgtgtaactacctattataattcatatttttatgattcctaaaaatattataatgt 37851689  T
Q  261 taaccaaacat 271  Q
    |||| ||||||    
T  37851688 taactaaacat 37851678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 3254289 - 3254350
Alignment:
Q  217 tattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    |||||||| || ||||||||||||||||   |||||||| ||||||||||||||||||||||    
T  3254289 tattataacccttatttttatggtttctaggaatattatgaagttaaccaaacatatttttt 3254350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 11763511 - 11763577
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatcc 227  Q
    |||| |||||||||||||||  |||| |||||  |||||||||||||||| ||| ||||||||||||    
T  11763511 aaaaaggtgggaataaagtttccatgaagatgagaataaattcataaatagttacctattataatcc 11763577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 11763597 - 11763658
Alignment:
Q  217 tattataatccctatttttatggtttctta-aaatattataaagttaaccaaacatatttttt 278  Q
    ||||||||||||||||||||||| ||||||  ||||||||||| |||| ||||||||||||||    
T  11763597 tattataatccctatttttatgg-ttcttaggaatattataaaattaatcaaacatatttttt 11763658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 39819561 - 39819503
Alignment:
Q  220 tataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    |||||||| |||||||| |||| |||  ||||||||||||| |||||||||||||||||    
T  39819561 tataatccttatttttaaggttccttggaatattataaagtcaaccaaacatatttttt 39819503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 14253413 - 14253368
Alignment:
Q  232 ttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||||||| || || ||||||||||||||||||||||||||||||||    
T  14253413 ttttatgtttcctaaaaatattataaagttaaccaaacatattttt 14253368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 18745597 - 18745537
Alignment:
Q  182 acatggagatgtaaataaattcataaataattatctattataatccctatttttatggttt 242  Q
    ||||| ||||| ||||||||| ||  ||||||| ||||||||||| |||||||||||||||    
T  18745597 acatgaagatggaaataaatttatgtataattacctattataatcactatttttatggttt 18745537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 4e-43; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 1597430 - 1597599
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||||| |||||||| ||| |  ||||| |||||||| || ||||||||||||||||||||||||| |||| |||||  ||||||||||||||    
T  1597430 attttattcccggatataaaatgttcctgggaatagaaaaatttttccaagaaaaagggtgggaataaagttcccatgaagatgggaataaattcataaa 1597529  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||| ||||||||||||| || | ||||||||||||||||||||||||||||||    
T  1597530 tagtttacctattataatccatatttttatggttcctaagaatattataaagttaaccaaacatattttt 1597599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 39329592 - 39329422
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | | ||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  39329592 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccatgaaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 39329493  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||| ||||||||||||||||||    
T  39329492 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatatttttt 39329422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 2632836 - 2632668
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| |||| ||||| |||||||||| ||||||||||| ||||||||||||||    
T  2632836 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaatggtgg-aataaagttcccatggagatgtgaataaattcataaa 2632738  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  2632737 tagtttacctattataatccctatttttatggttcctagaaatattataaagttaaccaaacatattttt 2632668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 3572653 - 3572822
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  3572653 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 3572752  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  3572753 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 3572822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 46666692 - 46666523
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  46666692 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 46666593  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  46666592 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 46666523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 37436760 - 37436876
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||||||| ||||||||||| ||||||||||  |||||||||||||||| |||||||||||||||| ||||||||||||| || | |||||||||||||    
T  37436760 aaaagggtgagaataaagttcccatggagatgagaataaattcataaatagttatctattataatccttatttttatggttcctaagaatattataaagt 37436859  T
Q  261 taaccaaacatattttt 277  Q
    |||||||||||||||||    
T  37436860 taaccaaacatattttt 37436876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 4683462 - 4683630
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||||| |||||||| ||| |  ||||| ||||| ||  | || |||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  4683462 attttattcccggatataaaatgttcctaggaatagaaaaaatttcccaaaaaaaaggg-gggaataaagttcccatggagatgtgaataaattcataaa 4683560  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| || | |||||||||||| |||||||||||||||||    
T  4683561 tagtttacctattataatccctatttttatggttcctaagaatattataaagctaaccaaacatattttt 4683630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 12190265 - 12190434
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| |||| |||||||||||||||| |||| |||||  ||||||||||||||    
T  12190265 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaatggtgggaataaagttcccatgaagatgggaataaattcataaa 12190364  T
Q  209 taattatc-tattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || || ||||||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||    
T  12190365 tagttttcctattataatccctatttttatggttccttggaatattataaagctaaccaaacatattttt 12190434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 20260174 - 20260343
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  20260174 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 20260273  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| ||| |||||||||||||    
T  20260274 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaagcaaacatattttt 20260343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 5518592 - 5518760
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||||||  | ||| |||| |||||||||||||||| ||||||||||  |||||||| ||| |    
T  5518592 attttattcccgggtataaaatgttcctgggaatagaaaaattttcccaaggaaaaaggtgggaataaagttcccatggagatgagaataaatttatata 5518691  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || ||| |||||||||||||||||||||||||| ||   ||| |||||||||||||| |||||||||||    
T  5518692 tagttacctattataatccctatttttatggttcctaggaatgttataaagttaaccgaacatattttt 5518760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 113 - 276
Target Start/End: Complemental strand, 14788703 - 14788539
Alignment:
Q  113 tattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata-a 211  Q
    |||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||      
T  14788703 tattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaatagt 14788604  T
Q  212 ttatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttt 276  Q
    ||| |||||||||||||||||||||||||| ||   |||||||||||| ||||||||||||||||    
T  14788603 ttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatatttt 14788539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 9831960 - 9832127
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||||||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  9831960 tttattccttggtataaaatgttcctgggaatagaaaaattttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 9832059  T
Q  211 -attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
      ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  9832060 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 9832127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 8331998 - 8331829
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| |||||    |  ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  8331998 attttattcccgggtataaaatgttcctgggaatagaaaaaaaatttcaaggaaaagggtgggaataaagttcccatggagatgagaataaattcataaa 8331899  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  8331898 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 8331829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 9115819 - 9115652
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  9115819 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 9115720  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  9115719 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 9115652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 25789745 - 25789578
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  25789745 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 25789646  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  25789645 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 25789578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 163 - 300
Target Start/End: Original strand, 48916164 - 48916302
Alignment:
Q  163 aagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagtta 262  Q
    |||| |||||||||||||| ||||||||||  ||||||||||||  || ||  |||||||||||||||||||||||||||||   |||||||||||||||    
T  48916164 aaggatgggaataaagttcccatggagatgggaataaattcatatgtagttgcctattataatccctatttttatggtttctaggaatattataaagtta 48916263  T
Q  263 accaaacatattttttgttaaatatctt-gaataaaatt 300  Q
    ||||||||||||||||  |||||| ||| ||||||||||    
T  48916264 accaaacatatttttttctaaataccttggaataaaatt 48916302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 49823036 - 49823154
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataa-ttatctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||| ||   |||||||||||     
T  49823036 aaaagggtgggaataaagttcccatggagatgataataaattcataaataatttacctattataatccctatttttatggttcctaggaatattataaac 49823135  T
Q  260 ttaaccaaacatatttttt 278  Q
     ||||||||||||||||||    
T  49823136 ctaaccaaacatatttttt 49823154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 52630757 - 52630588
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaa-tttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataa 207  Q
    ||||||||| |||||||||||| ||| |  ||||| ||||| ||| || ||||||| ||||||||||||||||| ||||||||||  |||||||||||||    
T  52630757 attttattctcgggtataaaatgttcctgggaatagaaaaaatttctcaaagaaaa-gggtgggaataaagttcccatggagatgagaataaattcataa 52630659  T
Q  208 ataatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||| || | |||||||||| ||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  52630658 atagtttacctattataattcctatttttatggttcctaggaatattataaagctaaccaaacatattttt 52630588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 2430480 - 2430312
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  2430480 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 2430381  T
Q  209 taa-ttatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||| |||  ||||||||||||||||||||||||| ||   |||| ||||||| |||||||||||| ||||    
T  2430380 taatttacttattataatccctatttttatggttcctaggaata-tataaagctaaccaaacataatttt 2430312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 13653835 - 13653666
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||||| |||||||| ||| |  ||||| ||||| ||  | ||  |||| |||||||||||||||| ||||||||||  ||||||||||||      
T  13653835 attttattcccggatataaaatgttcctgggaatagaaaaaatttcccaaagaaaatggtgggaataaagttcccatggagatgagaataaattcatatg 13653736  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || ||| ||||||||||||||| |||||||||| ||   |||||||||||||||||||||||||||||||    
T  13653735 tagttacctattataatccctaattttatggttcctaggaatattataaagttaaccaaacatatttttt 13653666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 32202453 - 32202570
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  32202453 aaaagggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 32202552  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  32202553 ctaaccaaacatattttt 32202570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 51445219 - 51445336
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  51445219 aaaagggtgggaataaagttcccatggagatgagaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 51445318  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  51445319 gtaaccaaacatattttt 51445336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 39930439 - 39930272
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| |||||  | || ||| ||||||||||||||||||||  ||||||||||  ||||||||||||||||    
T  39930439 tttattccttggtataaaatgttcctgggaatagaaaaaaatttccaaggaaaagggtgggaataaagtttccatggagatgagaataaattcataaata 39930340  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  39930339 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 39930272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 32824906 - 32824736
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaa-tttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataa 207  Q
    |||||||| ||||||||||| | ||| |  ||||| ||||| |||  | ||| ||||||||||||||||||||| |||| |||||  |||||||||||||    
T  32824906 attttatttccgggtataaattgttcctgggaatagaaaaaatttcccaaaggaaaagggtgggaataaagttcccatgaagatgggaataaattcataa 32824807  T
Q  208 ataatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||| || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  32824806 atagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 32824736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 48462462 - 48462345
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    |||||| |||| ||||||||| ||||||  ||  |||||||||||||||| ||| |||||||||||| ||||||||||||| ||  ||||||||||||||    
T  48462462 aaaaggatgggtataaagttcccatggaattgggaataaattcataaatagttacctattataatccttatttttatggttcctacaaatattataaagt 48462363  T
Q  261 taaccaaacatatttttt 278  Q
    ||||||||||||||||||    
T  48462362 taaccaaacatatttttt 48462345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 5806425 - 5806533
Alignment:
Q  170 ggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaa 268  Q
    |||||||||||| |||||||||| ||||||||||||||||| || | |||||||||||||||||||||||||| ||   |||||||||||| ||||||||    
T  5806425 ggaataaagttcccatggagatggaaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaa 5806524  T
Q  269 catattttt 277  Q
    |||||||||    
T  5806525 catattttt 5806533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 6978702 - 6978585
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||||||| || | ||||||||||||||| |||||||||| ||   ||||||||||||    
T  6978702 aaaagggtgggaataaagtttccatggagatgagaataaattcataaatagtttacctattataatccctaattttatggttcctaggaatattataaag 6978603  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  6978602 ctaaccaaacatattttt 6978585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 36361766 - 36361598
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||| |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||| ||||||||||||| ||||||||||  | ||||||||||||    
T  36361766 attttattcccaggtataaaatgttcctaggaatagaaaaaatttcccaaggaaaaggg-gggaataaagttcccatggagatgagagtaaattcataaa 36361668  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | ||||||||||||||||||||||||||  |   |||||||||||| |||||||||||||||||    
T  36361667 tagtttacctattataatccctatttttatggttcataggaatattataaagctaaccaaacatattttt 36361598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 50190853 - 50191021
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| |||| |||||||||||||||| |||| ||||| || ||||||||||||    
T  50190853 attttattcccgggtataaaatgttccttggaatagaaaaaatttcccaaggaaaaaggtgggaataaagttcccatgaagatggaa-taaattcataaa 50190951  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | ||||||||||||||||||||||| || ||   |||||||||||| ||| |||||||||||||    
T  50190952 tagtttacctattataatccctatttttatgattcctaggaatattataaagctaatcaaacatattttt 50191021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 162 - 300
Target Start/End: Complemental strand, 47677574 - 47677436
Alignment:
Q  162 aaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagtt 261  Q
    ||||| |||||||||||||| |||| |||||  |||||| | ||   ||||||  |||||||||||||||||||| |||| |||| ||||||| ||||||    
T  47677574 aaaggatgggaataaagttcccatgaagatgggaataaaattatgtgtaattacatattataatccctatttttaaggttccttagaatattacaaagtt 47677475  T
Q  262 aaccaaacatattttttgttaaatatctt-gaataaaatt 300  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  47677474 aaccaaacatatttttt-ttaaatatcttggaataaaatt 47677436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 161 - 301
Target Start/End: Complemental strand, 30240942 - 30240804
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttctta-aaatattataaag 259  Q
    ||||| ||| ||||||||||| |||| |||||  |||||||| |||  |||||| ||||||||||||||| |||||||| ||||||  ||||||||||||    
T  30240942 aaaagagtgagaataaagttctcatgaagatgagaataaatttatatgtaattacctattataatccctacttttatgg-ttcttaggaatattataaag 30240844  T
Q  260 ttaaccaaacatattttttgttaaatatcttgaataaaattt 301  Q
    ||||||||||||||||||  |||||||| | |||||||||||    
T  30240843 ttaaccaaacatattttt--ttaaatatttggaataaaattt 30240804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 6911417 - 6911300
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    |||| |||||||||||||||| ||| ||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||| ||||    
T  6911417 aaaatggtgggaataaagttcccatagagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattaaaaag 6911318  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  6911317 ctaaccaaacatattttt 6911300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 35187386 - 35187275
Alignment:
Q  163 aagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaagtt 261  Q
    ||||||||||||||||||| |||||||||   ||||| |||||||||| || | |||||||||||||||||||||||||||||   |||||||||||  |    
T  35187386 aagggtgggaataaagttcccatggagataagaataagttcataaatagtttacctattataatccctatttttatggtttctaggaatattataaaact 35187287  T
Q  262 aaccaaacatat 273  Q
    ||||||||||||    
T  35187286 aaccaaacatat 35187275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 111 - 241
Target Start/End: Original strand, 38964769 - 38964900
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | |||| |||||||||||||||||||| |||||||||   ||||||||||||||||    
T  38964769 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaagagaaagggtgggaataaagttcccatggagattggaataaattcataaata 38964868  T
Q  211 a-ttatctattataatccctatttttatggtt 241  Q
    | ||| ||||||||||||||||||||||||||    
T  38964869 atttacctattataatccctatttttatggtt 38964900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 1007668 - 1007586
Alignment:
Q  195 aataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||| || | |||||||||||||||| |||||||||||||    
T  1007668 aataaattcataaatagttacctattataatccatatttttatggttcctaagaatattataaagttaatcaaacatattttt 1007586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 29091650 - 29091486
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||| || ||| ||||| ||| || ||||| ||||| ||  | || ||||| |||||||||||||||| ||||||||     ||||||| | | |    
T  29091650 attttattctcgagtaaaaaatgttcatcggaatagaaaaaatttcccaaaaaaaaaggtgggaataaagttcccatggaga-----ataaatttacaca 29091556  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || ||| ||||||||| |||||||||||||||| ||   |||||||||||||||||||||||||||||||    
T  29091555 tagttacctattataaaccctatttttatggttcctagtaatattataaagttaaccaaacatatttttt 29091486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 37336618 - 37336699
Alignment:
Q  195 aataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttt 276  Q
    |||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||||| || ||||||||||||| ||||    
T  37336618 aataaattcatgtataattacctattataatctctatttttatggtttcttaaaatattaaaatgttaaccaaacatgtttt 37336699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 29769447 - 29769309
Alignment:
Q  157 aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattata 256  Q
    ||||||||||||||||||||||||  |||| ||||| ||||||||||||   |||||| |||||||||||  | ||| || |||| ||| ||||||||||    
T  29769447 aagaaaaagggtgggaataaagtttccatgaagatgaaaataaattcatgtgtaattacctattataatctatgtttctaaggttccttgaaatattata 29769348  T
Q  257 aagttaaccaaacatattttttgt--taaatatcttgaa 293  Q
    | |||||| |||||| |||||| |  |||||||||||||    
T  29769347 atgttaactaaacattttttttcttctaaatatcttgaa 29769309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 109 - 291
Target Start/End: Complemental strand, 46960611 - 46960430
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| |||| |||  | ||  ||||||||||||||||||||| |||| ||||| ||||||| |  |       
T  46960611 attttattcccgggtataaaatgttcctgggaatagaaaagttttcccaatgaaaagggtgggaataaagttcccatgaagatg-aaataaaattgtgtg 46960513  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttttgttaaatatcttg 291  Q
    |||||| ||||||||| | ||||||||| ||||  ||  |||||||||| ||||||||||||| ||||||  |||||||||||    
T  46960512 taattacctattataaactctatttttaaggttcattggaatattataatgttaaccaaacatctttttttctaaatatcttg 46960430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 1228026 - 1228135
Alignment:
Q  169 gggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaa 268  Q
    ||||||||||||| |||| ||||   |||||| | ||  | ||||| ||||||||||||||||||||| |||| ||| ||||||||||||||| ||||||    
T  1228026 gggaataaagttcccatgaagattagaataaaattatgtagaattacctattataatccctatttttaaggttccttgaaatattataaagttcaccaaa 1228125  T
Q  269 catatttttt 278  Q
    ||||||||||    
T  1228126 catatttttt 1228135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 52699606 - 52699723
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||| | |||||  |||||||||| |||||||| |||||| |    |||||||||| ||    
T  52699606 aaaagggtgggaataaagttcccatggagatgggaataaattcatgagtaatttcctattataattcctattttcatggttcccaggaatattataatgt 52699705  T
Q  261 taaccaaacatatttttt 278  Q
    ||| ||||| ||||||||    
T  52699706 taagcaaacttatttttt 52699723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 47031757 - 47031674
Alignment:
Q  195 aataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    |||||||||||||||| || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  47031757 aataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 47031674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 52186170 - 52186262
Alignment:
Q  162 aaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatatta 254  Q
    ||||||||||||| |||||||||| ||||||| ||||||||  || ||| ||| ||||||||||  ||||||||||||||||| | |||||||    
T  52186170 aaagggtgggaattaagttcacattgagatgtgaataaatttctacatagttacctattataatttctatttttatggtttctaagaatatta 52186262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 24116475 - 24116592
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||||| |||||||||| || |||| |||||  |||| ||| ||   |||||| |||||||||| |||||||||||||||||  |||||||| ||| ||    
T  24116475 aaaagggagggaataaagctcccatgaagatgagaatatatttatgtgtaattacctattataattcctatttttatggtttccaaaaatattttaatgt 24116574  T
Q  261 taaccaaacatatttttt 278  Q
    ||| ||||||| ||||||    
T  24116575 taagcaaacatctttttt 24116592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 38519250 - 38519318
Alignment:
Q  210 aattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    ||||| ||||||||||||||||||||||||||||  | |||||||||| ||||| ||||||| ||||||    
T  38519250 aattacctattataatccctatttttatggtttccaagaatattataatgttaaacaaacatctttttt 38519318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 47037439 - 47037340
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  47037439 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 47037340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 286
Target Start/End: Complemental strand, 49627472 - 49627381
Alignment:
Q  195 aataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttttgttaaata 286  Q
    |||||||||||   ||| || |||||||||||| |||||||||||||  || ||||||||||| ||||||||||||| |||| | |||||||    
T  49627472 aataaattcatgtgtaactacctattataatccatatttttatggttctttgaaatattataatgttaaccaaacattttttcttttaaata 49627381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 3939397 - 3939304
Alignment:
Q  195 aataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttttgttaaatatctt 290  Q
    |||||||||||| ||  ||| |||||||||||  |||||||| | || ||||||||||||||| ||||| ||||||| |||||| |||||||||||    
T  3939397 aataaattcatacatggttacctattataatctatatttttaag-ttccttaaaatattataatgttaatcaaacatgtttttt-ttaaatatctt 3939304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 276
Target Start/End: Original strand, 13048384 - 13048525
Alignment:
Q  139 gaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatg----taaataaattcataaataattatctattataatccctatttt 234  Q
    |||||||||  ||| |||||  |||||||||| |||||||||  |||| | |||    ||| |||||||||  ||||||| |||||||||||| ||||||    
T  13048384 gaatataaatttttttctaaagaaaagggtggaaataaagtttccatgaatatgggaataattaaattcatgtataattacctattataatccttatttt 13048483  T
Q  235 tatggtttcttaaaatattataaagttaaccaaacatatttt 276  Q
    ||  ||| || | |||||||| | ||||| ||||||||||||    
T  13048484 tagtgttcctgagaatattatcatgttaagcaaacatatttt 13048525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 276
Target Start/End: Original strand, 13053381 - 13053522
Alignment:
Q  139 gaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatg----taaataaattcataaataattatctattataatccctatttt 234  Q
    |||||||||  ||| |||||  |||||||||| |||||||||  |||| | |||    ||| |||||||||  ||||||| |||||||||||| ||||||    
T  13053381 gaatataaatttttttctaaagaaaagggtggaaataaagtttccatgaatatgggaataattaaattcatgtataattacctattataatccttatttt 13053480  T
Q  235 tatggtttcttaaaatattataaagttaaccaaacatatttt 276  Q
    ||  ||| || | |||||||| | ||||| ||||||||||||    
T  13053481 tagtgttcctgagaatattatcatgttaagcaaacatatttt 13053522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 19923652 - 19923743
Alignment:
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttttgttaaatatctt-gaataaaatt 300  Q
    |||||| ||||||||||||||| |||| |||||    |||| ||||||| ||||| ||||||||||||||  |||||||||| ||||||||||    
T  19923652 taattacctattataatccctacttttttggttctcaaaaacattataatgttaaacaaacatatttttt-ctaaatatcttagaataaaatt 19923743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 3e-41; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 55968088 - 55968258
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | | ||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  55968088 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccatgaaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 55968187  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||||||||||||||||||||||    
T  55968188 tagtttacctattataatccctatttttatggttcctaggaatattataaagttaaccaaacatatttttt 55968258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 39730381 - 39730550
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  39730381 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcacatggagatgggaataaattcataaa 39730480  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| ||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  39730481 tagtttacctattataatccctattttcatggttcctaggaatattataaagttaaccaaacatattttt 39730550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 8322230 - 8322063
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  ||||||||||||||||  ||||| |||||  | || ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  8322230 tttattccttggtataaaatattcttgggaatagaaaaaaatttccaaggaaaagggtgggaataaagttcccatggagatgagaataaattcataaata 8322131  T
Q  211 a-ttatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    | ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  8322130 atttacctattataatccctatttttatggttcctatgaatattataaagctaaccaaacatattttt 8322063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 34049685 - 34049855
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||| ||||||||||| ||| |  ||||| ||||| ||  | |||||||| |||||||||||||||| ||||||||||  ||||||||||||||    
T  34049685 attttattccagggtataaaatgttcctgggaatagaaaaaatttcccaagaaaaatggtgggaataaagttcccatggagatgggaataaattcataaa 34049784  T
Q  209 taattatc-tattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || || || ||||||||||||||||||||||||| |||  |||||||||||| ||||||||||||||||||    
T  34049785 tagttttcctattataatccctatttttatggttccttggaatattataaagctaaccaaacatatttttt 34049855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 6280009 - 6280178
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  6280009 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttctcatggagatgggaataaattcataaa 6280108  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   ||||||||||||||||||||| ||||||||    
T  6280109 tagtttacctattataatccctatttttatggttcctaggaatattataaagttaaccaaatatattttt 6280178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 13230077 - 13230246
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  13230077 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 13230176  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  13230177 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 13230246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 32953510 - 32953341
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||| |||||||||||| ||| |  ||||| ||||| ||  | ||| |||| |||||||||||||||| ||||||||||  ||||||||||||||    
T  32953510 attttattctcgggtataaaatgttcctaggaatagaaaaaatttcccaaggaaaatggtgggaataaagttctcatggagatgggaataaattcataaa 32953411  T
Q  209 taattatc-tattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || || ||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  32953410 tagttttcctattataatccctatttttatggttccttgaaatattataaagctaaccaaacatattttt 32953341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 27762987 - 27763156
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||  ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  27762987 attttattcccgggtataaaatgttcctgggaatagaaaatatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 27763086  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  27763087 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 27763156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 31937957 - 31938126
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaag-aaaaagggtgggaataaagttcacatggagatgtaaataaattcataa 207  Q
    |||||||||||   |||||||| |||||  ||||| ||||| || || ||| |||||||||||||||||||||| ||||||||||  |||||||||||||    
T  31937957 attttattcccaaatataaaatgttcttgggaataaaaaaaattttccaaggaaaaagggtgggaataaagttcccatggagatgagaataaattcataa 31938056  T
Q  208 ataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    | | ||| |||||||||||| ||||||||||||| ||   ||||||||||||||||||||||||||||||    
T  31938057 acagttacctattataatccttatttttatggttcctaggaatattataaagttaaccaaacatattttt 31938126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 41859135 - 41859303
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||| |||||||||| ||| |  ||||| ||||||||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  41859135 attttattcccaggtataaaatgttcctgggaatagaaaaatttccc-aaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 41859233  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  41859234 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 41859303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 42773935 - 42773766
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  | ||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  42773935 attttattcccgggtataaaatgttcctggggataaaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 42773836  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  42773835 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 42773766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 25932426 - 25932259
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  25932426 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 25932327  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||    
T  25932326 gtttacctattataatccctatttttatggttcctaggaatattataaagttaaccaaacatattttt 25932259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 27942724 - 27942554
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||| || |||  ||||||||||||||    
T  27942724 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccattgaaatgagaataaattcataaa 27942625  T
Q  209 taa-ttatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    ||| ||| |||||||||||| ||||||||||||| ||   |||||||||||| ||||||||||||||||||    
T  27942624 taatttacctattataatccttatttttatggttcctaggaatattataaagctaaccaaacatatttttt 27942554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 45747884 - 45748053
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||| ||||||||||||| ||||||||||  ||||||||||||||    
T  45747884 attttattcccgggtataaaatgttcctaggaatagaaaaaatttcccaaggaaaagggggggaataaagttcccatggagatgagaataaattcataaa 45747983  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || ||  | ||||||||| |||||||||||||| ||   |||||||||||| ||||||||||||||||||    
T  45747984 tagtttaccattataatctctatttttatggttcctaggaatattataaagctaaccaaacatatttttt 45748053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 48518979 - 48519148
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||| |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  48518979 attttattcccaggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 48519078  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||| ||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  48519079 tagtttacctattataatacctatttttatggttcctaggaatattataaagctaaccaaacatattttt 48519148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 35999671 - 35999504
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  35999671 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 35999572  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  35999571 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 35999504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 48879310 - 48879143
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  48879310 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 48879211  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  48879210 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 48879143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 25916121 - 25916291
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||  |  ||||| ||||| ||  | ||| ||||||||||||||||||||| |||| |||||  ||||||||||||||    
T  25916121 attttattcccgggtataaaatgtttctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatgaagatgggaataaattcataaa 25916220  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||| ||| ||||||||||||||    
T  25916221 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaatcaaacatatttttt 25916291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 936113 - 935944
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||| ||||||| ||| |  ||||| ||||| ||    ||||||||||||||||||||||||| |||||| |||  ||||||||||||||    
T  936113 attttattcccgggcataaaatgttcctgggaatagaaaaaatttcacaagaaaaagggtgggaataaagttcccatggaaatgagaataaattcataaa 936014  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||| ||| ||   |||||||||||| |||||||||||||||||    
T  936013 tagtttacctattataatccctatttttatagttcctaggaatattataaagctaaccaaacatattttt 935944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 18931740 - 18931571
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||| ||||||||| ||| |  ||||| |||||  | || |||||||| |||||||||||||||| ||||||||||  |||||||| |||||    
T  18931740 attttattcccgtgtataaaatgttcctgggaatagaaaaaaatttccaagaaaaatggtgggaataaagttcccatggagatgggaataaatttataaa 18931641  T
Q  209 taattat-ctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||||| | |||||||||||||||||||||| |||  |   |||||||||||| |||||||||||||||||    
T  18931640 taattttcctattataatccctatttttatagttcataggaatattataaagctaaccaaacatattttt 18931571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 48873956 - 48873839
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  48873956 aaaagggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 48873857  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  48873856 ctaaccaaacatattttt 48873839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 38414164 - 38414032
Alignment:
Q  139 gaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatg 238  Q
    ||||||||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||  || ||| |||||||||| ||||||||||||    
T  38414164 gaatataaaaaatttcccaaggaaaagggtgggaataaagttctcatggagatggtaataaattcatatgtagttacctattataattcctatttttatg 38414065  T
Q  239 gtttcttaaaatattataaagttaaccaaacat 271  Q
    |||||| | ||||||||||||||| ||||||||    
T  38414064 gtttctaagaatattataaagttacccaaacat 38414032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 18405324 - 18405490
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| || || ||| ||||||||| ||||||||||| ||||||||||  ||||||||||||||||    
T  18405324 tttattccttggtataaaatgttcctgggaataaaaaaaatt-tccaaggaaaagggtgagaataaagttcccatggagatgagaataaattcataaata 18405422  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  18405423 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 18405490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 39835397 - 39835564
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| |||||||||   ||||||||||||||||    
T  39835397 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagattagaataaattcataaata 39835496  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||| |||||||||| |||||   ||||||||||||||||||||||||||||||    
T  39835497 gtttacctattataatccttatttttatgatttctaggaatattataaagttaaccaaacatattttt 39835564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 40435885 - 40435718
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||| ||||||  ||||||||||||||||    
T  40435885 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatagagatgggaataaattcataaata 40435786  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | ||||||||||| |||||||||||||| ||   ||||||||||||||||||||||||||||||    
T  40435785 gtttacctattataatctctatttttatggttcctaggaatattataaagttaaccaaacatattttt 40435718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 43723249 - 43723082
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||| ||||||||||| ||||||||||  ||||||||||||||||    
T  43723249 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgagaataaagttcccatggagatgagaataaattcataaata 43723150  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  43723149 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 43723082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 45596253 - 45596086
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| |||||| |||  ||||||||||||||||    
T  45596253 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggaaatgggaataaattcataaata 45596154  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  45596153 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 45596086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 27555361 - 27555245
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataa-ttatctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||| ||   |||| |||||||    
T  27555361 aaaagggtgggaataaagttcccatggagatgggaataaattcataaataatttacctattataatccctatttttatggttcctaggaata-tataaag 27555263  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  27555262 ctaaccaaacatattttt 27555245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 50672993 - 50673161
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||| |||||||||||| ||  |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  50672993 attttattctcgggtataaaatgtttctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 50673092  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| ||||||||||||||| |||||||||| ||   |||||||||||| |||||||||||||||||    
T  50673093 tagtttacctattataatcccta-ttttatggttcctaggaatattataaagctaaccaaacatattttt 50673161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 34238044 - 34238211
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| |||||  ||||| ||| | ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  34238044 tttattccttggtataaaatgttcttgggaatagaaacaatttcccaaggaaaagggtgggaataaagttcccatggagatgagaataaattcataaata 34238143  T
Q  211 -attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
      ||| |||||||||||||||||||| | ||| ||   |||||||||||| |||||||||||||||||    
T  34238144 gtttacctattataatccctattttttttgttcctaggaatattataaagctaaccaaacatattttt 34238211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 41744361 - 41744478
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    |||||||||||||||||||||  |||||||||  ||||||||||||| || || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  41744361 aaaagggtgggaataaagttcctatggagatgagaataaattcataattagtttacctattataatccctatttttatggttcctaggaatattataaag 41744460  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  41744461 ctaaccaaacatattttt 41744478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 23686772 - 23686605
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||||||  |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  23686772 tttattccttggtataaaatatttctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 23686673  T
Q  211 -attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
      ||| |||||||||| | ||||||||||||| ||   |||||||||||  |||||||||||||||||    
T  23686672 gtttacctattataattcatatttttatggttcctaggaatattataaaactaaccaaacatattttt 23686605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 161 - 300
Target Start/End: Complemental strand, 36858341 - 36858203
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||||||||||||||| ||| ||||||||||  |||||||||||| ||| ||| || ||||||||| ||||||||||||| ||   ||||||| |||||    
T  36858341 aaaagggtgggaataaaattctcatggagatgggaataaattcatatatagttacctgttataatccttatttttatggttcctaggaatattacaaagt 36858242  T
Q  261 taaccaaacatattttttgttaaatatcttgaataaaatt 300  Q
    || |||||||||| |||| ||||||| ||||||| |||||    
T  36858241 tatccaaacatat-ttttcttaaataccttgaatgaaatt 36858203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 39498760 - 39498643
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    |||||||||| |||||||||| ||| ||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  39498760 aaaagggtggaaataaagttctcatagagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 39498661  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||| ||||||||    
T  39498660 ctaaccaaatatattttt 39498643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 39502099 - 39501982
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    |||||||||| |||||||||| ||| ||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  39502099 aaaagggtggaaataaagttctcatagagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 39502000  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||| ||||||||    
T  39501999 ctaaccaaatatattttt 39501982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 36858517 - 36858633
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||||||||||||||||||| |||| |||||  ||||| ||||||  ||||||  |||||||||||||||||||||||||||    |||||||||| ||    
T  36858517 aaaagggtgggaataaagttcccatgaagatgagaataatttcatatgtaattacatattataatccctatttttatggtttccgggaatattataatgt 36858616  T
Q  261 taaccaaacatattttt 277  Q
    ||| |||||||||||||    
T  36858617 taaacaaacatattttt 36858633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 38394845 - 38394724
Alignment:
Q  157 aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattata 256  Q
    ||||||| |||||||||||||||||  || |||||| |||||||||||| | |||||  |||||||||| ||||||||||||||| |  |||||||||||    
T  38394845 aagaaaaggggtgggaataaagttctgatagagatggaaataaattcatgagtaatttcctattataattcctatttttatggttcccaaaaatattata 38394746  T
Q  257 aagttaaccaaacatatttttt 278  Q
    |  |||| ||||||| ||||||    
T  38394745 atattaagcaaacatctttttt 38394724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 47670347 - 47670180
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| |||| ||||| |||||||||  |||| |||||  ||||||||||||||||    
T  47670347 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaatggtggaaataaagtttccatgaagatgagaataaattcataaata 47670248  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||| ||||||||    
T  47670247 gtttacctattataatccctatttttatggttcctaggaatattataaagataaccaaatatattttt 47670180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 166 - 287
Target Start/End: Complemental strand, 52469628 - 52469507
Alignment:
Q  166 ggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaacc 265  Q
    |||||||||||||||| |||||||||| ||||||||||  | ||| ||| ||||||||||| |||| |||||||||  |   |||||||||||| |||||    
T  52469628 ggtgggaataaagttcccatggagatggaaataaattccaatatagttacctattataatctctatatttatggttcataggaatattataaagctaacc 52469529  T
Q  266 aaacatattttttgttaaatat 287  Q
    |||||| ||||||  |||||||    
T  52469528 aaacatgtttttttctaaatat 52469507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 160 - 278
Target Start/End: Original strand, 47426381 - 47426492
Alignment:
Q  160 aaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||| |||||||||| |||| ||||| ||||||||||||||||| ||| |||||||||||||||       |||| ||   ||||||||||||    
T  47426381 aaaaagggtggcaataaagttcccatgaagatgaaaataaattcataaatagttacctattataatcccta-------ggttcctaggaatattataaag 47426473  T
Q  260 ttaaccaaacatatttttt 278  Q
    ||||||||| |||||||||    
T  47426474 ttaaccaaatatatttttt 47426492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 51968715 - 51968596
Alignment:
Q  157 aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttctta-aaatattat 255  Q
    ||||||||||||||||||||||||| |||| ||||| |||||| ||||||  ||||||   |||||||||| ||||||||||| |||| | |||||||||    
T  51968715 aagaaaaagggtgggaataaagttcccatgaagatggaaataatttcatatgtaatta--cattataatccttatttttatgg-ttctcagaaatattat 51968619  T
Q  256 aaagttaaccaaacatatttttt 278  Q
    || ||||| ||||||| ||||||    
T  51968618 aatgttaaacaaacatctttttt 51968596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 161 - 255
Target Start/End: Complemental strand, 30415837 - 30415743
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattat 255  Q
    |||| |||||||||||| ||  |||  ||||| |||||| |||||||||||||| |||||||||||||||||||||||||| || | ||||||||    
T  30415837 aaaatggtgggaataaaatttccataaagatgaaaataatttcataaataattacctattataatccctatttttatggttcctaagaatattat 30415743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 48059990 - 48059873
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    |||| |||||||||||||||| |||  | || |||||||||||||| ||||||| |||||||||| | |||||||||  || ||  |||||||||||| |    
T  48059990 aaaatggtgggaataaagttctcataaaaatataaataaattcatatataattacctattataattcttatttttataattcctagaaatattataaaat 48059891  T
Q  261 taaccaaacatatttttt 278  Q
    |||  |||||||||||||    
T  48059890 taattaaacatatttttt 48059873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 18405688 - 18405586
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||||||||||||||||||| |||  |||||  ||||||| |||   |||||| ||||||||||| |||||||||||||| ||  ||||||||||| ||    
T  18405688 aaaagggtgggaataaagttctcattaagatgggaataaatccatgtgtaattacctattataatctctatttttatggttcctagaaatattataatgt 18405589  T
Q  261 taa 263  Q
    |||    
T  18405588 taa 18405586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 271
Target Start/End: Complemental strand, 18094183 - 18094073
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    |||| |||| ||||||||||| |||| |||||  |||||||||||   ||| || |||||||||| | |||||||||| || || |||||||||||| ||    
T  18094183 aaaatggtgagaataaagttcccatgaagatgagaataaattcatgtgtaactacctattataattcatatttttatgattcctaaaaatattataatgt 18094084  T
Q  261 taaccaaacat 271  Q
    |||| ||||||    
T  18094083 taactaaacat 18094073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 44309695 - 44309579
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttct-taaaatattataaag 259  Q
    ||||||||||||||||||||| |||| | ||| ||||  ||| ||   ||||||||| |||||||||||||||||| |  ||||  | |||||||||| |    
T  44309695 aaaagggtgggaataaagttcccatgaatatgaaaatttattaatgtgtaattatctgttataatccctattttta-gtattctcgagaatattataatg 44309597  T
Q  260 ttaaccaaacatattttt 277  Q
    ||||||| ||||||||||    
T  44309596 ttaaccatacatattttt 44309579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 32384583 - 32384651
Alignment:
Q  210 aattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    ||||| ||||||||||||||| ||||||||||||    |||||||||| ||||| |||||||| |||||    
T  32384583 aattacctattataatccctaattttatggtttccaggaatattataatgttaagcaaacatacttttt 32384651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 300
Target Start/End: Original strand, 37014525 - 37014663
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||| |||| |||||||||| |||| |||||  |||||||||||   |||||   || |||||| | |||||||| | ||||| ||| |||||||| ||    
T  37014525 aaaagagtggaaataaagttctcatgaagatgagaataaattcatgtgtaatttcttactataattcttatttttaagatttctgaaa-tattataatgt 37014623  T
Q  261 taaccaaacatattttttgttaaatatctt-gaataaaatt 300  Q
    ||||||||||| ||||||  |||||||||| ||||||||||    
T  37014624 taaccaaacatctttttt-ctaaatatcttcgaataaaatt 37014663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 276
Target Start/End: Complemental strand, 7258898 - 7258783
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||| ||||||||||||||| |||| | |||  |||||||||||   ||| ||  ||||||| |||  |||||||||||| |||  ||||||| || ||    
T  7258898 aaaagagtgggaataaagttcccatgaatatgggaataaattcatttgtaactacttattatagtcctaatttttatggttccttggaatattaaaatgt 7258799  T
Q  261 taaccaaacatatttt 276  Q
    ||||||||||| ||||    
T  7258798 taaccaaacatctttt 7258783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 26165241 - 26165180
Alignment:
Q  217 tattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    ||||||| |||||||||||| ||||  || |||||||||||  |||||||||||| ||||||    
T  26165241 tattatattccctatttttaaggttctttgaaatattataatattaaccaaacatctttttt 26165180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 1e-40; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 38364064 - 38363895
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  38364064 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaagaaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 38363965  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  38363964 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 38363895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 16313595 - 16313764
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | |||||||| |||||||||||||||| ||||||||||  ||||||||||||||    
T  16313595 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaagaaaaatggtgggaataaagttcccatggagatgagaataaattcataaa 16313694  T
Q  209 taattat-ctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||||| | ||||||||||||||||||||||| || ||   |||||||||||| |||||||||||||||||    
T  16313695 taattttcctattataatccctatttttatgattcctaggaatattataaagctaaccaaacatattttt 16313764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 18298095 - 18297926
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| |||||| |||  ||||||||||||||    
T  18298095 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggaaatgagaataaattcataaa 18297996  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||  ||||||||||||| |||||||||||||||||    
T  18297995 tagtttacctattataatccctatttttatggttcctagaaatattataaagctaaccaaacatattttt 18297926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 26062079 - 26061958
Alignment:
Q  157 aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattat 255  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||| | |||||||||||||||||||||||||| ||   ||||||||    
T  26062079 aagaaaaagggtgggaataaagttcccatggagatgggaataaattcataaataatttacctattataatccctatttttatggttcctaggaatattat 26061980  T
Q  256 aaagttaaccaaacatattttt 277  Q
    ||||||||||||||||||||||    
T  26061979 aaagttaaccaaacatattttt 26061958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 35818512 - 35818681
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  35818512 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 35818611  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  35818612 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 35818681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 37392634 - 37392803
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  37392634 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 37392733  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  37392734 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 37392803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 10896352 - 10896473
Alignment:
Q  157 aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattat 255  Q
    ||||||||||||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| || | ||||||||    
T  10896352 aagaaaaagggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaagaatattat 10896451  T
Q  256 aaagttaaccaaacatattttt 277  Q
    |||| |||||||||||||||||    
T  10896452 aaagctaaccaaacatattttt 10896473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 25837894 - 25837725
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||||||  | || ||||||||||| |||||||||| ||||||||||  ||||||||||||||    
T  25837894 attttattcccgggtataaaatgttcctgggaatagaaaaattttcccaaaaaaaagggtggcaataaagttcccatggagatgagaataaattcataaa 25837795  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| ||||||||||||||||||||||||||  |   |||||||||||| |||||||||||||||||    
T  25837794 tagtttacctattataatccctatttttatggttcataggaatattataaagctaaccaaacatattttt 25837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 7931220 - 7931053
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| | |||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  7931220 tttattccttggtataaaatgttcctgagaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 7931121  T
Q  211 -attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
      ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  7931120 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 7931053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 3049992 - 3049822
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| |||||  | || ||  ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  3049992 attttattcccgggtataaaatgttcctgggaatagaaaaaaatttccaaagaaaagggtgggaataaagttcccatggagatgagaataaattcataaa 3049893  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || || | ||||||||||||||||||||||| || ||   |||||||||||| ||||||||||||||||||    
T  3049892 tagtttacctattataatccctatttttatgattcctaggaatattataaagataaccaaacatatttttt 3049822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 18726707 - 18726877
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatct-aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataa 207  Q
    ||||||||||| |||||||||| ||| |  ||||| |||||  | ||  ||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  18726707 attttattcccaggtataaaatgttcctgggaatagaaaaaaatttcccaaggaaaagggtgggaataaagttctcatggagatggaaataaattcataa 18726806  T
Q  208 ata-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    |||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  18726807 atagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 18726877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 19160829 - 19160998
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||| ||||||| |||||||||||||||  |||||||||||    || ||  ||||||||||||||||||||  ||||||||||  ||| ||||||||      
T  19160829 atttcattcccgtgtataaaatattcttgggaatataaaaaaaattccaaagaaaagggtgggaataaagttgtcatggagatgagaatgaattcatatg 19160928  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    |||||| |||||||||||||||||||||||||| || | |||||||||| | ||||||||||||||||||    
T  19160929 taattacctattataatccctatttttatggttcctaagaatattataatgctaaccaaacatatttttt 19160998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 38132878 - 38132995
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaata-attatctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||  ||| |||||||||||||||||||||||||| ||   ||||||||||||    
T  38132878 aaaagggtgggaataaagttctcatggagatgtgaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 38132977  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  38132978 ctaaccaaacatattttt 38132995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 32661021 - 32661191
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaaga-aaaagggtgggaataaagttcacatggagatgtaaataaattcataa 207  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | |||  ||||||||||||||||||||| ||||||||||  |||||||||||||    
T  32661021 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaagggaaaagggtgggaataaagttcccatggagatgggaataaattcataa 32661120  T
Q  208 ata-attatctattataatccctatttttatggtttctta-aaatattataaagttaaccaaacatattttt 277  Q
    |||  ||| |||||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||    
T  32661121 atagtttacctattataatccctatttttatgg-ttcttaggaatattataaagctaaccaaacatattttt 32661191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 21137220 - 21137389
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||  |  ||||||||| |||| || ||  |||| ||||| |||||||||| | ||||||||  ||||||||||||      
T  21137220 attttattcccgggtataaaatgtttgtgggaatataaatatttttccaaagaaaatggtggaaataaagttctcgtggagatgagaataaattcatatg 21137319  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || ||| |||||||||||| ||||||||||||| ||   |||||||||||||||||||||||||||||||    
T  21137320 tagttacctattataatccgtatttttatggttcctaggaatattataaagttaaccaaacatatttttt 21137389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 121 - 277
Target Start/End: Original strand, 26602037 - 26602194
Alignment:
Q  121 ggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata-attatctat 219  Q
    |||||||||| |||||  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||  ||| ||||    
T  26602037 ggtataaaatgttcttgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgagaataaattcataaatagtttagctat 26602136  T
Q  220 tataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    |||||||||||||||||||||| |    |||||||||||| |||||||||||||||||    
T  26602137 tataatccctatttttatggttccaaggaatattataaagctaaccaaacatattttt 26602194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 41228802 - 41228970
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  |  || |||||||||||||||||||||  ||||||||  || ||||||||||||    
T  41228802 attttattcccgggtataaaatgttccttggaatagaaaaaatttcccgaggaaaagggtgggaataaagttcctatggagatagaa-taaattcataaa 41228900  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||    
T  41228901 tagtttacctattataatccctatttttatggtttctaggaatattataaagctaaccaaacatattttt 41228970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 6805711 - 6805879
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||| |||||| || |||||  ||||| |||| |||  ||||  ||||||||| ||||||||||| ||||||||||  ||||||||||||||    
T  6805711 attttattcccgagtataatatgttcttgggaatagaaaatttttcctaaagaaaagggtgagaataaagttctcatggagatgagaataaattcataaa 6805810  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  || |||||| |||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  6805811 tagatacctattaaaatctctattttcatggttcctgggaatattataaagttaaccaaacatattttt 6805879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 7317310 - 7317191
Alignment:
Q  157 aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattata 256  Q
    |||||||| |||||||||||||||| ||||||||||  ||||||||| |||||| ||| ||||||||||||||||||| |||| ||||   |||||||||    
T  7317310 aagaaaaatggtgggaataaagttcccatggagatgggaataaattcgtaaatagttacctattataatccctattttcatgg-ttctaggaatattata 7317212  T
Q  257 aagttaaccaaacatattttt 277  Q
    |||||||||||||||||||||    
T  7317211 aagttaaccaaacatattttt 7317191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 29421577 - 29421746
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||| |||||||||||||||  |  ||||| ||||||||  | ||  |||| |||||||||||||||| ||||||||||  |||||||| |||      
T  29421577 attttattctcgggtataaaatatttctgggaatagaaaaattttcccaaagaaaatggtgggaataaagttcccatggagatgagaataaatttatatg 29421676  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || ||| |||||||||||||||||||||||||| ||   |||||||||||||||| |||| |||||||||    
T  29421677 tagttacctattataatccctatttttatggttcctaggaatattataaagttaatcaaatatatttttt 29421746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 42755798 - 42755681
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  42755798 aaaagggtgggaataaagttctcatggagatgagaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 42755699  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||| ||||||||    
T  42755698 ctaaccaaatatattttt 42755681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 35394373 - 35394205
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| |||| |  |||| |||||  | || |||||||| ||||||||||||||||  | |||||||  || ||| ||||| |    
T  35394373 attttattcccgggtataaaatgttctacgtaatagaaaaaaatttccaagaaaaatggtgggaataaagttcctaaggagatgggaacaaactcatata 35394274  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || ||| |||||||||||| |||||||||||||  |   ||||||||||||||||||||||||||||||    
T  35394273 tagttacctattataatccttatttttatggttcataggaatattataaagttaaccaaacatattttt 35394205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 12710626 - 12710459
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  12710626 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgagaataaattcataaata 12710527  T
Q  211 -attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
      ||| |||||||||||| ||||||||||||| ||   |||||||||||| |||| ||||||||||||    
T  12710526 gtttacctattataatccttatttttatggttcctaggaatattataaagctaacgaaacatattttt 12710459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 1554442 - 1554611
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatct-aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataa 207  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| || ||| ||| ||||||||||||||||||||  ||||||||||  ||||||||||||     
T  1554442 attttattcccgggtataaaatgttcctgggaatagaaaaaatt-tctcaaggaaaagggtgggaataaagtttccatggagatgggaataaattcatac 1554540  T
Q  208 ataa-ttatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    |||| ||| ||||||||||||||| |||||||||| ||   |||||||||||  ||||||| |||||||||    
T  1554541 ataatttacctattataatccctaattttatggttcctaggaatattataaaactaaccaaccatattttt 1554611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 139 - 277
Target Start/End: Original strand, 5020611 - 5020748
Alignment:
Q  139 gaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatg 238  Q
    ||||| ||||||||  | ||| ||||||||||||||||||||| |||| |||||  ||||||||||||| || ||| |||||||||||| |||||||||     
T  5020611 gaatagaaaaattttcccaaggaaaagggtgggaataaagttcccatgaagatgggaataaattcataagtagttacctattataatccatatttttat- 5020709  T
Q  239 gtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    | |||  | ||||||||||||||||||||||||||||||    
T  5020710 gattcccagaatattataaagttaaccaaacatattttt 5020748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 31117618 - 31117781
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||| |||  |||||||| |||||||||||| |||||  | || ||||||||||||||||||||||||| ||||| |||      |||||||||||    
T  31117618 attttatttccgaatataaaatgttcttcagaatagaaaaaaatttccaagaaaaagggtgggaataaagttcccatggggat------aaattcataaa 31117711  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || ||| ||||||||||  |||||||||||||| ||   |||||||||||||||||||| ||||| ||||    
T  31117712 tagttacctattataatatctatttttatggttcctaggaatattataaagttaaccaagcatatatttt 31117781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 43872054 - 43872223
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||||||| |||| |  ||  |||  ||| ||||||||||||| |||||||||  |||||| |||   |    
T  43872054 attttattcccgggtataaaatgttcctgggaatataaatattttttcaaagaaattggtaggaataaagttcatatggagatgggaataaaatcacgta 43872153  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    |||||| ||||||||||||||||||||  |||| ||| ||| ||||||| ||||||||||||| ||||||    
T  43872154 taattacctattataatccctatttttgaggttccttgaaacattataatgttaaccaaacatctttttt 43872223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 15226947 - 15226779
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||| ||||||||||||||||| |  ||||| ||||  ||  | ||| ||||||||||||||||||||| |||| |||||  |||||| | ||       
T  15226947 attttatttccgggtataaaatattcctgcgaatagaaaagattcccaaag-aaaagggtgggaataaagttcccatgaagatgagaataaaattatgtg 15226849  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
     ||||| ||||||||||||||||||||| |||| |||  | | |||||||||||||||||||||||||||    
T  15226848 gaattacctattataatccctatttttaaggttccttggatttttataaagttaaccaaacatatttttt 15226779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 40197227 - 40197310
Alignment:
Q  195 aataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||    
T  40197227 aataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaagttaaccaaacatattttt 40197310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 41432675 - 41432529
Alignment:
Q  158 agaaaaagggtgggaataaagttcacatggaga-tgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattata 256  Q
    ||||||||||||| |||||||||| |||||||| ||  ||||||||||| | |||||  |||||||||| ||||||||||||| | |  | |||||||||    
T  41432675 agaaaaagggtggaaataaagttcccatggagattgagaataaattcatgagtaatttcctattataattcctatttttatggctcccaagaatattata 41432576  T
Q  257 aagttaaccaaacatat-tttttgttaaatatctt-gaataaaattt 301  Q
    | ||||| ||||||||| ||||| ||||||  ||| |||||||||||    
T  41432575 atgttaagcaaacatatattttttttaaatgccttggaataaaattt 41432529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 33444713 - 33444880
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||||| |||||||| |||||  ||||| ||||| ||  | ||  |||| |||||||||||||||| |||| ||||| | |||| ||||||      
T  33444713 attttattcccgg-tataaaatgttcttgggaatagaaaaaattgcccaaagaaaatggtgggaataaagttcccatgaagatg-agataatttcatatg 33444810  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || ||| |||||| |||| |||||| |||| || ||   |||||||||||||||||||||||||||||||    
T  33444811 tagttacctattagaatcactatttgtatgattgctaggaatattataaagttaaccaaacatatttttt 33444880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 37981926 - 37982043
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    |||||||||| ||||||||||  ||| | |||  |||||||| |||  ||||||  | ||||||||||||||||||||||| |   ||||||||||| ||    
T  37981926 aaaagggtggaaataaagttcctatgaaaatgagaataaatttatatgtaattacttgttataatccctatttttatggttcccataaatattataatgt 37982025  T
Q  261 taaccaaacatatttttt 278  Q
    ||| ||||||| ||||||    
T  37982026 taagcaaacatctttttt 37982043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 12650061 - 12649950
Alignment:
Q  167 gtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaacca 266  Q
    ||||||||||||||| |||| | ||| ||||||||||| |  ||| || ||||||||||| ||||||||   ||| || | |||||||||| ||||| ||    
T  12650061 gtgggaataaagttcccatgaaaatgaaaataaattcacatgtaactacctattataatctctattttttaagttcctaagaatattataatgttaatca 12649962  T
Q  267 aacatatttttt 278  Q
    ||||| ||||||    
T  12649961 aacatctttttt 12649950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 16219130 - 16219199
Alignment:
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    |||||| ||||||||||||| ||||| |||||| |  | |||||||||| ||||||||||||| ||||||    
T  16219130 taattacctattataatccccattttcatggttcccaagaatattataatgttaaccaaacatctttttt 16219199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 14764019 - 14764111
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaatt 202  Q
    ||||||||| |||||||||||| ||| | |||||| |||||    || | |||||| ||||||||||||||||||||| |||||  ||||||||    
T  14764019 attttattcacgggtataaaatgttcatgagaatagaaaaaaaattcaatgaaaaa-ggtgggaataaagttcacatgaagatgataataaatt 14764111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 1e-40; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 26849005 - 26848836
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  ||||| ||||||||||||||||||||| |||||| |||  ||||||||||||||    
T  26849005 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcctaaggaaaagggtgggaataaagttcccatggaaatgggaataaattcataaa 26848906  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||    
T  26848905 tagtttacctattataatccctatttttatggttcctaggaatattataaagttaaccaaacatattttt 26848836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 8476396 - 8476565
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  8476396 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 8476495  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  8476496 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 8476565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 9320536 - 9320705
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||||||| |  ||||| ||||| ||  ||||| |||| |||||||||||||||| |||||||||| |||||||||||||||    
T  9320536 attttattcccgggtataaaatattcctgggaatagaaaaaatttcctaaggaaaaaggtgggaataaagttcccatggagatggaaataaattcataaa 9320635  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  |||  |||||| |||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  9320636 tagtttacttattatgatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 9320705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 46359935 - 46359766
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| |||||  ||||| ||||  ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  46359935 attttattcccgggtataaaatgttcttgtgaatagaaaatatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 46359836  T
Q  209 taattat-ctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||||| | ||||||||||||||||||||||| || ||   |||||||||||| |||||||||||||||||    
T  46359835 taattttcctattataatccctatttttatgattcctaggaatattataaagctaaccaaacatattttt 46359766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 19533127 - 19532959
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| |||  ||| || ||| ||||||||||||||||||||  | ||||||||  ||||||||||||||    
T  19533127 attttattcccgggtataaaatgttcctgggaatagaaatttttttccaaggaaaagggtgggaataaagtttccttggagatgggaataaattcataaa 19533028  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || ||| ||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  19533027 tagttacctattataatccctattttcatggttcctaggaatattataaagttaaccaaacatattttt 19532959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 1099179 - 1099013
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  1099179 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 1099080  T
Q  211 attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     ||| |||||||||||||||||||||||||| ||  ||||||||||||| || ||||||||||||||    
T  1099079 tttacctattataatccctatttttatggttcctagaaatattataaagctagccaaacatattttt 1099013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 28124524 - 28124693
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| || ||||||||||| ||  | ||| ||||||||||||||||||||| |||| |||||  ||||||||||||||    
T  28124524 attttattcccgggtataaaatgttcctcggaatataaaaaatttcccaaggaaaagggtgggaataaagttcccatgaagatgggaataaattcataaa 28124623  T
Q  209 ta-attatctattataatccctatttttatggtttctta-aaatattataaagttaaccaaacatattttt 277  Q
    ||  |||  ||||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||    
T  28124624 tagtttacatattataatccctatttttatgg-ttcttaggaatattataaagctaaccaaacatattttt 28124693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 31611073 - 31611243
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | | |||||||||||||||||||||||  |||||||||  ||||||||||||||    
T  31611073 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccatgaaaaagggtgggaataaagttcctatggagatgggaataaattcataaa 31611172  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||| ||||||||||||||||||    
T  31611173 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatatttttt 31611243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 6231589 - 6231758
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||  |||| |||||||||||||||| ||||||||||  ||||||||||||||    
T  6231589 attttattcccgggtataaaatgttccttggaatagaaaaaatttcccaatgaaaatggtgggaataaagttcccatggagatgggaataaattcataaa 6231688  T
Q  209 taattatc-tattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||||| || ||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  6231689 taattttcctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 6231758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 33218001 - 33218170
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||| ||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||| ||||||  ||||||||||||||    
T  33218001 attttattcccgagtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatagagatgggaataaattcataaa 33218100  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||    
T  33218101 tagtttacctattataatccctatttttatggttcctaggaatattataaagttaaccaaacatattttt 33218170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 53165813 - 53165981
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||||| |||||||| ||  |  ||||| |||| ||| || ||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  53165813 attttattcccggatataaaatgtttctgggaatagaaaattttttccaagaaaaagggtgggaataaagttcccatggagatgagaataaattcataaa 53165912  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || ||| ||||||||||  ||||||||||| || ||   |||||||||| |||||||||||||||||||    
T  53165913 tagttacctattataatatctatttttatgattcctaggaatattataaggttaaccaaacatattttt 53165981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 114 - 277
Target Start/End: Original strand, 10822811 - 10822974
Alignment:
Q  114 attcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt 213  Q
    ||||||||||||||||| ||| |  ||||| ||||| ||  |  || ||||||||||||||||||||  ||||||||||  |||||| ||||||||| ||    
T  10822811 attcccgggtataaaatgttcctgggaatagaaaaaatttccctaggaaaagggtgggaataaagttttcatggagatgggaataaaatcataaatagtt 10822910  T
Q  214 atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    |||||| ||||||||||||| ||||||| || | ||||||||||||||||||||||||||||||    
T  10822911 atctataataatccctatttgtatggttcctaagaatattataaagttaaccaaacatattttt 10822974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 20297774 - 20297607
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| |||||  | || ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  20297774 tttattccttggtataaaatgttcctgggaatagaaaaaaatttccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 20297675  T
Q  211 a-ttatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    | ||| |||||||||||||||||||||||||| ||   ||||||||||||| ||||||||||||||||    
T  20297674 atttacctattataatccctatttttatggttcctaggaatattataaagtcaaccaaacatattttt 20297607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 40908248 - 40908080
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| |||| |||||  ||||||||||||||    
T  40908248 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatgaagatgggaataaattcataaa 40908149  T
Q  209 taa-ttatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||| ||| |||||||||||||||||||||||||| ||   |||| ||||||| |||||||||||||||||    
T  40908148 taatttacctattataatccctatttttatggttcctaggaata-tataaagctaaccaaacatattttt 40908080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 11239210 - 11239377
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  11239210 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 11239309  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  11239310 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 11239377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 48339847 - 48340014
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  48339847 tttattccttggtataaaatgttcatgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaata 48339946  T
Q  211 att-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
     || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  48339947 gtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 48340014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 20414553 - 20414722
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| |||||   |||| |||||  |  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  20414553 attttattcccgggtataaaatgttcttggaaataaaaaaaaattcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 20414652  T
Q  209 ta-attatctattataatccctatttttatggtttctta-aaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||| ||||||  |||||||||||| ||| |||||||||||||    
T  20414653 tagtttacctattataatccctatttttatgg-ttcttaggaatattataaagctaatcaaacatattttt 20414722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 47114997 - 47115114
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  47114997 aaaagggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 47115096  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  47115097 ctaaccaaacatattttt 47115114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 24574502 - 24574381
Alignment:
Q  157 aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattat 255  Q
    |||||||| |||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||| ||||||||||||| ||   ||||||||    
T  24574502 aagaaaaatggtgggaataaagttcccatggagatgagaataaattcataaatagtttacctattataatccttatttttatggttcctaggaatattat 24574403  T
Q  256 aaagttaaccaaacatattttt 277  Q
    |||| |||||||||||||||||    
T  24574402 aaagctaaccaaacatattttt 24574381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 157 - 278
Target Start/End: Original strand, 26849282 - 26849403
Alignment:
Q  157 aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattata 256  Q
    |||||||| ||||||||||||||||  |  ||||||  |||||||||||||||| ||| ||||||||||| |||||||||||||| ||   |||||||||    
T  26849282 aagaaaaatggtgggaataaagttcctacagagatgagaataaattcataaatagttacctattataatctctatttttatggttcctatgaatattata 26849381  T
Q  257 aagttaaccaaacatatttttt 278  Q
    ||||||||||||||||||||||    
T  26849382 aagttaaccaaacatatttttt 26849403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 44952239 - 44952122
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaata-attatctattataatccctatttttatggtttcttaa--aatattataa 257  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||  ||| |||||||||||||||||||||||  ||| |||  ||||||||||    
T  44952239 aaaagggtgggaataaagttcccatggagatgagaataaattcataaatagtttacctattataatccctatttttatg--ttcctaaggaatattataa 44952142  T
Q  258 agttaaccaaacatattttt 277  Q
    ||||||||||||||||||||    
T  44952141 agttaaccaaacatattttt 44952122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 43132297 - 43132413
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||||||||||||| ||||| || |||||||  | |||||||||||||| ||| ||||||||||||||||||| |||||| ||   |||||||||||||    
T  43132297 aaaagggtgggaatagagttcccacggagatgagattaaattcataaatagttacctattataatccctattttcatggttcctaggaatattataaagt 43132396  T
Q  261 taaccaaacatattttt 277  Q
    |||||||||||||||||    
T  43132397 taaccaaacatattttt 43132413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 29512530 - 29512414
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    |||||||||| |||||||||| ||| |||||| || |||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  29512530 aaaagggtggaaataaagttcccatagagatggaa-taaattcataaatagtttacctattataatccctatttttatggttcctatgaatattataaag 29512432  T
Q  260 ttaaccaaacatattttt 277  Q
     ||||||||| |||||||    
T  29512431 ctaaccaaacgtattttt 29512414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 43719020 - 43719182
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  || ||||||| ||| | |||||| ||||| ||  | ||| |||||||||||||||||| || |||||||||| ||     ||||||||||    
T  43719020 tttattccttggcataaaatgttcctgagaatagaaaaaatttcccaaggaaaagggtgggaataaagatcccatggagatggaa-----ttcataaata 43719114  T
Q  211 attatct-attataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    |||  || |||||||||| ||||||||||||| || | |||||||||||| |||||||||||||||||    
T  43719115 atttacttattataatccatatttttatggttcctaagaatattataaagctaaccaaacatattttt 43719182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 166 - 300
Target Start/End: Original strand, 12228400 - 12228534
Alignment:
Q  166 ggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaacc 265  Q
    |||| ||||||||||| ||||||||||  |||||| |||||  || |||||||||||||| | |||||||||| || || | ||||| |||||  |||||    
T  12228400 ggtgagaataaagttcccatggagatgagaataaaatcatatgtagttatctattataatacttatttttatgattcctaagaatatcataaaactaacc 12228499  T
Q  266 aaacatattttttgttaaatatctt-gaataaaatt 300  Q
    ||||||||||||| ||||||| ||| ||||||||||    
T  12228500 aaacatatttttt-ttaaataccttagaataaaatt 12228534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 28770350 - 28770460
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    |||| |||||||||||||||| |||| |||||  ||| | ||||||  |||||| |||||||||||||||||||||||||| |  | |||||||||| ||    
T  28770350 aaaatggtgggaataaagttctcatgaagatgggaatgatttcatatgtaattacctattataatccctatttttatggttcccgataatattataacgt 28770449  T
Q  261 taaccaaacat 271  Q
    ||| |||||||    
T  28770450 taaacaaacat 28770460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 31436011 - 31436180
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||| ||||||||||| ||| | | |||| ||||||||  | ||  |||  |||||||||||||||| ||||||||||  |||||||||  |      
T  31436011 attttattcctgggtataaaatgttcctgaaaatagaaaaattttcccaaagaaattggtgggaataaagttcccatggagatgagaataaattctaatg 31436110  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || ||| |||||||||||| |||||||||| || |   ||||||||||||  ||||||||||| ||||||    
T  31436111 tagttacctattataatccttatttttatgattccaagaaatattataaaactaaccaaacatgtttttt 31436180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 32071376 - 32071260
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||||| | |||||||||| |||||||||||  ||||||||  ||  || ||| |||||||||||  ||||||||||||| ||   |||||||||||||    
T  32071376 aaaagggcgagaataaagtt-acatggagatgagaataaatttgtatgtagttacctattataatctttatttttatggttcctaggaatattataaagt 32071278  T
Q  261 taaccaaacatatttttt 278  Q
    ||||||||||||||||||    
T  32071277 taaccaaacatatttttt 32071260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 161 - 293
Target Start/End: Complemental strand, 40584541 - 40584410
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    |||| |||||||||||||||| ||||||||||  |||||| | ||   |||| | |||||||| | |||||||||| |||| |||  |||||||||| ||    
T  40584541 aaaatggtgggaataaagttcccatggagatgggaataaaattatgtgtaatcacctattatatttcctatttttaaggttccttggaatattataatgt 40584442  T
Q  261 taaccaaacatattttttgttaaatatcttgaa 293  Q
    ||||||||||| |||||| ||||||| ||||||    
T  40584441 taaccaaacatctttttt-ttaaataccttgaa 40584410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 300
Target Start/End: Complemental strand, 24784177 - 24784000
Alignment:
Q  123 tataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattat 222  Q
    |||||||||||| | ||||||||||  ||| || ||||||| | ||  ||||||||||| |||| |||||  |||||| | ||   |||||| |||||||    
T  24784177 tataaaatattcataagaatataaagttttttcaaagaaaa-gtgtatgaataaagttcccatgaagatgggaataaaattatgtgtaattacctattat 24784079  T
Q  223 aatccctatttttatggtttcttaaaatattataaag-ttaaccaaacatattttttgttaaatatctt-gaataaaatt 300  Q
    ||||  |||||||| |||| |||  |||||| ||||| ||||||||||||||||||| ||||||| ||| ||||||||||    
T  24784078 aatctttatttttaaggttccttggaatattctaaagtttaaccaaacatatttttt-ttaaataccttagaataaaatt 24784000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 1247042 - 1247156
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    |||| ||||||||||  ||||||||||||||   ||||||||| || ||| |||||||||||||||| ||||||||| ||  |    | ||||||| |||    
T  1247042 aaaaaggtgggaata--gttcacatggagatcggaataaattcttatatagttatctattataatccatatttttatagtaccaaggagtattatagagt 1247139  T
Q  261 taaccaaacatattttt 277  Q
    |||||||||||||||||    
T  1247140 taaccaaacatattttt 1247156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 27823205 - 27823088
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||||||||||||||| ||| |||| |||||  || ||||||||   |||||| || ||||||||| |||||||||| |||||   |||||||||| ||    
T  27823205 aaaagggtgggaataaaattctcatgaagatgagaacaaattcatgtgtaattacctgttataatccatatttttatgatttctaggaatattataatgt 27823106  T
Q  261 taaccaaacatatttttt 278  Q
    ||| |||| || ||||||    
T  27823105 taagcaaatatttttttt 27823088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 6832111 - 6832180
Alignment:
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    |||||| |||||||||||| |||||||| ||||  ||  |||| ||| ||||||||||||||||||||||    
T  6832111 taattacctattataatccttatttttaaggttctttggaatactatgaagttaaccaaacatatttttt 6832180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 13642952 - 13642885
Alignment:
Q  210 aattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    ||||| ||||||||||| |||||| || |||| ||| || ||||||||||||||||||||| |||||||    
T  13642952 aattacctattataatctctatttgtaaggttccttgaa-tattataaagttaaccaaacagatttttt 13642885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 18460748 - 18460669
Alignment:
Q  195 aataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattt 275  Q
    ||||||||||||  || ||| | |||||||||||| ||||||||||| ||   ||||||||||||||||||||| ||||||    
T  18460748 aataaattcatatgtagttaccgattataatccctgtttttatggtt-ctatgaatattataaagttaaccaaatatattt 18460669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 21925624 - 21925692
Alignment:
Q  195 aataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaa 263  Q
    ||||||||||||   |||||  |||||||||||||||||||||||||| | | |||||||||| |||||    
T  21925624 aataaattcatatgcaattacatattataatccctatttttatggtttttgagaatattataatgttaa 21925692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 33647791 - 33647959
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||| ||||||||||  ||  | ||||||||||||  | || ||  ||||| |||| |||||||||  | || |||||  ||||||||||        
T  33647791 attttattcctgggtataaaacgtttctgagaatataaaaaaatttccaaagaaaagagtggaaataaagtttccttgaagatgagaataaattcacgtg 33647890  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    |||||||||||||||||  |||||||||||||||   | ||||||||||  |||| ||||||| |||||    
T  33647891 taattatctattataatttctatttttatggttttcgagaatattataatattaagcaaacatcttttt 33647959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 12931080 - 12931198
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggttt-cttaaaatattataaag 259  Q
    |||| |||||||||||||||| ||| ||||||  |||||| | ||   |||||| |||||||| ||| |||||||| | ||| ||| |||||||||||      
T  12931080 aaaatggtgggaataaagttcccatagagatgggaataaaattatgtgtaattacctattatattccttatttttaagatttccttgaaatattataatt 12931179  T
Q  260 ttaaccaaacatatttttt 278  Q
    |||| ||||||| ||||||    
T  12931180 ttaatcaaacatctttttt 12931198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 6e-39; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 29543103 - 29543273
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | | ||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  29543103 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccatgaaaaagggtgggaataaagttcccatggagatgagaataaattcataaa 29543202  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||| ||||||||||||||||||    
T  29543203 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatatttttt 29543273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 4765648 - 4765817
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  4765648 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 4765747  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  4765748 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 4765817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 8406877 - 8406708
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| |||| |||||||||||||||| ||||||||||  ||||||||||||||    
T  8406877 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaatggtgggaataaagttcccatggagatgggaataaattcataaa 8406778  T
Q  209 taattat-ctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||| ||||| |||  |||||||||||| |||||||||||||||||    
T  8406777 tagttttcctattataatccctatttttttggttccttggaatattataaagctaaccaaacatattttt 8406708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 11855743 - 11855912
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||||| |||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  11855743 attttattcccggatataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagtttccatggagatgggaataaattcataaa 11855842  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||    
T  11855843 tagtttacctattataatccctatttttatggttcctaggaatattataaagttaaccaaacatattttt 11855912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 22936000 - 22936169
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||| |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  22936000 attttattcccaggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 22936099  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  22936100 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 22936169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 6091696 - 6091529
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| |||||  ||||| ||||||||  | ||| ||||| ||||||||||||||| ||||||||||  ||||||||||||||||    
T  6091696 tttattccttggtataaaatgttcttgggaatagaaaaattttcccaaggaaaagagtgggaataaagttcccatggagatgagaataaattcataaata 6091597  T
Q  211 a-ttatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    | ||| |||||||||| ||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  6091596 atttacctattataattcctatttttatggttcctaggaatattataaagctaaccaaacatattttt 6091529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 12970618 - 12970787
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||   |||| ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  12970618 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcttaaggaaaagggtgggaataaagtttccatggagatgggaataaattcataaa 12970717  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||  ||| |||||| ||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  12970718 tagtttacctattacaatccctatttttatggttcctatgaatattataaagctaaccaaacatattttt 12970787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 14206961 - 14207078
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  14206961 aaaagggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 14207060  T
Q  260 ttaaccaaacatattttt 277  Q
    ||||||||||||||||||    
T  14207061 ttaaccaaacatattttt 14207078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 18412192 - 18412023
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||| |||||||||||| ||| |  ||||| ||||| ||  | ||| |||| |||||||||||||||| ||||||||||  ||||||||||||||    
T  18412192 attttattctcgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaaaggtgggaataaagttcccatggagatgagaataaattcataaa 18412093  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  18412092 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 18412023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 27481340 - 27481171
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||||||| | |||||| ||||  ||  | ||| ||||||||||||||||||||| |||| |||||  ||||||||||||||    
T  27481340 attttattcccgggtataaaatattcctgagaataaaaaatatttcccaaggaaaagggtgggaataaagttcccatgaagatgagaataaattcataaa 27481241  T
Q  209 taattatc-tattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || ||  | |||||||||| |||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  27481240 tagtttacatattataatctctatttttatggttcctaggaatattataaagctaaccaaacatattttt 27481171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 121 - 277
Target Start/End: Complemental strand, 32535908 - 32535751
Alignment:
Q  121 ggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctat 219  Q
    |||||||||| || ||  ||||| ||||| ||  ||||| ||||||||||||||||||||| ||||||||||  |||||||||||||||| || | ||||    
T  32535908 ggtataaaatgttattgggaatagaaaaaatttcctaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctat 32535809  T
Q  220 tataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||||| |||||||||||||||| || | |||||||||||| |||||||||||||||||    
T  32535808 tataacccctatttttatggttcctgagaatattataaagctaaccaaacatattttt 32535751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 19065593 - 19065763
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||| ||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  19065593 attttatttccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 19065692  T
Q  209 ta-attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    ||  ||| |||||||||||||||| ||||||||| ||   |||||||||||| ||||||||||||| ||||    
T  19065693 tagtttacctattataatccctatatttatggttcctaggaatattataaagctaaccaaacatatatttt 19065763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 8646479 - 8646647
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||||| |||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  8646479 attttattcccggttataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgagaataaattcataaa 8646578  T
Q  209 taa-ttatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||| ||| |||||||||||||||||||||||||| ||   |||| ||||||| |||||||||||| ||||    
T  8646579 taatttacctattataatccctatttttatggttcctaggaata-tataaagctaaccaaacataatttt 8646647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 28602538 - 28602370
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||||| |||||||| ||  | |||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  28602538 attttattcccgg-tataaaatgtttctgagaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 28602440  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||| ||||||| ||   |||||||||||| |||||||||||||||||    
T  28602439 tagtttacctattataatccctatttgtatggttcctaggaatattataaagctaaccaaacatattttt 28602370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 36703855 - 36703688
Alignment:
Q  111 tttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaata 210  Q
    ||||||||  |||||||||| ||| |  ||||| ||||| ||  | |||||||||||||||||||||||||  |||||||||  ||||||||||||||||    
T  36703855 tttattccttggtataaaatgttcctgggaatagaaaaaatttcccaagaaaaagggtgggaataaagttcctatggagatgagaataaattcataaata 36703756  T
Q  211 -attatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
      ||| ||||||||||||||||||| |||||| ||   |||||||||||| |||||||||||||||||    
T  36703755 gtttacctattataatccctattttgatggttcctaggaatattataaagctaaccaaacatattttt 36703688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 555846 - 555963
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaata-attatctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||||  ||| ||||||||||||||| ||| |||||| ||   ||||||||||||    
T  555846 aaaagggtgggaataaagtttccatggagatgggaataaattcataaatagtttacctattataatccctaatttgatggttcctaggaatattataaag 555945  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  555946 ctaaccaaacatattttt 555963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 165 - 278
Target Start/End: Complemental strand, 1664657 - 1664544
Alignment:
Q  165 gggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaac 264  Q
    |||||||||| || ||| ||||||||||  |||||||| |||  || ||| ||||||||||||||||||||||||||  | | |||||||||||||||||    
T  1664657 gggtgggaattaaattcccatggagatgagaataaatttatatgtagttacctattataatccctatttttatggttcataagaatattataaagttaac 1664558  T
Q  265 caaacatatttttt 278  Q
    ||||||||||||||    
T  1664557 caaacatatttttt 1664544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 6930623 - 6930455
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||  ||| ||||||||||| ||  ||||| ||||||||  | |||||||  | |||||||||||||| |||| ||||| ||||||||| |||      
T  6930623 attttattttcggatataaaatattattgggaatagaaaaatttcccaaagaaaattg-tgggaataaagttcccatgaagatggaaataaatttatatc 6930525  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || ||||||||||||||| |||| | || |||||||   |||||||||||||||||||||||||||||||    
T  6930524 tagttatctattataatctctatctgtaaggtttctaggaatattataaagttaaccaaacatatttttt 6930455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 27480992 - 27480824
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||| | ||||||||| ||| |  ||||| |||| ||| || ||| |||||| || ||||||||||  ||||||||||  ||||||||||||||    
T  27480992 attttattcctgtgtataaaatgttcatgggaatagaaaattttttccaaggaaaagg-tgagaataaagtttccatggagatgagaataaattcataaa 27480894  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    ||  || ||||||||||  ||||||||||||||  |  ||||||||||||||||||||| ||||||||||    
T  27480893 tagctacctattataatttctatttttatggttcatagaaatattataaagttaaccaagcatatttttt 27480824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 20962521 - 20962404
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    |||||||||||| |||||||| ||||||||||  |||||||| || | |||||  |||||||||| ||||||||||||||| |   ||||||||||| ||    
T  20962521 aaaagggtgggagtaaagttctcatggagatgagaataaattaatgagtaatttcctattataattcctatttttatggttcccagaaatattataatgt 20962422  T
Q  261 taaccaaacatatttttt 278  Q
    ||| ||||||||||||||    
T  20962421 taagcaaacatatttttt 20962404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 42012267 - 42012399
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||| || ||||||||| ||| |  ||||| ||||| ||  | ||| |||||||||||||||||||||||||||||||   ||||||||| || |    
T  42012267 attttattctcgagtataaaatgttcctaggaatagaaaaaatttccgaaggaaaagggtgggaataaagttcacatggagatcagaataaattcttata 42012366  T
Q  209 taattatctattataatccctatttttatggtt 241  Q
    || ||| |||||||||||| |||||||||||||    
T  42012367 tagttacctattataatccatatttttatggtt 42012399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 17251736 - 17251628
Alignment:
Q  168 tgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaa 267  Q
    |||||||||||||  |||| ||||| ||||||||||||   ||| ||| ||||||||||||||||||||||| ||||   ||||||| || |||||||||    
T  17251736 tgggaataaagtttccatgaagatgaaaataaattcatgtgtaactatatattataatccctatttttatgg-ttctaggaatattaaaatgttaaccaa 17251638  T
Q  268 acatattttt 277  Q
    |||| |||||    
T  17251637 acatcttttt 17251628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 35348664 - 35348781
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||||||||||||||||||| |||| |||||  |||||||||| |  |||||| |||||||||| | ||||||||||||| |    |||||||||| ||    
T  35348664 aaaagggtgggaataaagttcccatgaagatgagaataaattcacatgtaattacctattataattcatatttttatggttcccgggaatattataatgt 35348763  T
Q  261 taaccaaacatatttttt 278  Q
    |||  |||||| ||||||    
T  35348764 taaaaaaacatttttttt 35348781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 36703656 - 36703596
Alignment:
Q  217 tattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  36703656 tattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 36703596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 293
Target Start/End: Original strand, 31583202 - 31583331
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    |||| |||||||||||||||| ||   ||||| |||||| ||||||  ||| || ||||||||||||||||||||| |||| || | |||||||||| ||    
T  31583202 aaaaaggtgggaataaagttcccacaaagatggaaataa-ttcatatgtaagtacctattataatccctatttttacggttcctgagaatattataatgt 31583300  T
Q  261 taaccaaacatattttttgttaaatatcttgaa 293  Q
    ||| | |  |||||||||  |||||||||||||    
T  31583301 taaacca--atatttttttctaaatatcttgaa 31583331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 43347035 - 43347152
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagt 260  Q
    ||||||||||||||||||||| |||| |||||  |||||| | ||   |||||| ||||| ||||||||||||||| |||| |||  ||||||| |  ||    
T  43347035 aaaagggtgggaataaagttcccatgaagatgagaataaaattatgcgtaattacctattttaatccctatttttaaggttccttcgaatattacattgt 43347134  T
Q  261 taaccaaacatatttttt 278  Q
    ||||||||| | ||||||    
T  43347135 taaccaaacttttttttt 43347152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 28429591 - 28429534
Alignment:
Q  229 tatttttatggtttcttaaaatattataaagttaaccaaacatattttttgttaaata 286  Q
    |||||||| ||||||| | |||||||||| ||||||||||||| |||||| |||||||    
T  28429591 tatttttaaggtttctgagaatattataatgttaaccaaacatctttttttttaaata 28429534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 26637195 - 26637279
Alignment:
Q  195 aataaattcataaataattatctattataatccctatttt-tatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    |||||||||| |  ||| || |||||||||||| |||||| ||||||| ||   ||||||||||||||||||||||| |||||||    
T  26637195 aataaattcaaatgtaactacctattataatccatattttttatggttcctaggaatattataaagttaaccaaacacatttttt 26637279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 278
Target Start/End: Original strand, 40275902 - 40276012
Alignment:
Q  168 tgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaa 267  Q
    |||||||||||||| |||| |||||  |||||| | ||   |||| | |||||| |||||||||||||| |||| | |  ||||||||||  ||||||||    
T  40275902 tgggaataaagttcccatgaagatgggaataaaattatctctaataacctattaaaatccctatttttaaggttccatggaatattataatattaaccaa 40276001  T
Q  268 acatatttttt 278  Q
    |||| ||||||    
T  40276002 acatctttttt 40276012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 3e-38; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 2657683 - 2657514
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  2657683 attttattcccgggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 2657584  T
Q  209 taattat-ctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||||| | |||||||||||| |||||||||| || ||   ||||||||||||||||||||||||||||||    
T  2657583 taattttcctattataatccatatttttatgattactaggaatattataaagttaaccaaacatattttt 2657514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 1317001 - 1316833
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||| |||||||||| ||| |  ||||| ||||||||  | ||| ||||||||||||||||||||| |||| |||||  ||||||||||||||    
T  1317001 attttattcccaggtataaaatgttcctgggaatagaaaaatttccc-aaggaaaagggtgggaataaagttcccatgaagatgggaataaattcataaa 1316903  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  1316902 tagtttacctattataatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 1316833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 16968908 - 16968739
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||| |||||||||||| ||  |  ||||| ||||| ||  | ||| |||||||||||||||||||||  |||||||||  ||||||||||||||    
T  16968908 attttattctcgggtataaaatgtttctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcctatggagatgagaataaattcataaa 16968809  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||||||||||||||||||||||| || | |||||||||||| |||||||||||||||||    
T  16968808 tagtttacctattataatccctatttttatggttcctaagaatattataaagctaaccaaacatattttt 16968739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 7053718 - 7053835
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    |||| |||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  7053718 aaaatggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 7053817  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  7053818 ctaaccaaacatattttt 7053835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 8029234 - 8029117
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| || | |||||||||||||||||||||||||| ||   ||||||||||||    
T  8029234 aaaagggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctattataatccctatttttatggttcctaggaatattataaag 8029135  T
Q  260 ttaaccaaacatattttt 277  Q
      ||||||||||||||||    
T  8029134 ccaaccaaacatattttt 8029117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 14170996 - 14170829
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||||| || |||||||| ||| |  ||||| ||||| || || ||| ||||||||||||||||||||| |||||||||| || ||||||||||||    
T  14170996 attttattcctggatataaaatgttcctgggaatagaaaaaatt-tccaaggaaaagggtgggaataaagttcccatggagatggaa-taaattcataaa 14170899  T
Q  209 taatt-atctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    || || | |||||| ||||||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  14170898 tagtttacctattacaatccctatttttatggttcctaggaatattataaagctaaccaaacatattttt 14170829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 164 - 277
Target Start/End: Original strand, 10246259 - 10246373
Alignment:
Q  164 agggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaagtta 262  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||| || | ||||||||||||||| |||||||||| ||   |||||||||||| ||    
T  10246259 agggtgggaataaagttcccatggagatgggaataaattcataaatagtttacctattataatccctaattttatggttcctaggaatattataaagcta 10246358  T
Q  263 accaaacatattttt 277  Q
    |||||||||||||||    
T  10246359 accaaacatattttt 10246373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 7344171 - 7344304
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||| |||||||||| ||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  7344171 attttattcccaggtataaaatgttcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgggaataaattcataaa 7344270  T
Q  209 ta-attatctattataatccctatttttatggtt 241  Q
    ||  ||| ||||||||||||||||||||||||||    
T  7344271 tagtttacctattataatccctatttttatggtt 7344304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 18897852 - 18897735
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataatt-atctattataatccctatttttatggtttcttaaaatattataaag 259  Q
    |||||||||| |||||||||| ||||||||||  |||||||||||||||| || | |||||||||| ||||||||||||||| ||   ||||||||||||    
T  18897852 aaaagggtggaaataaagttcccatggagatgggaataaattcataaatagtttacctattataattcctatttttatggttcctaggaatattataaag 18897753  T
Q  260 ttaaccaaacatattttt 277  Q
     |||||||||||||||||    
T  18897752 ctaaccaaacatattttt 18897735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 345971 - 346090
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcataaataattatctattataatccctatttttatggtttcttaa--aatattataaa 258  Q
    |||||||||||||||||||||  |||||||||  ||||||||||| | |||||  |||||| ||| ||||||||||||||||| | |  ||| ||||||     
T  345971 aaaagggtgggaataaagttccaatggagatgagaataaattcatgagtaatttcctattaaaattcctatttttatggtttcctcaggaatgttataat 346070  T
Q  259 gttaaccaaacatatttttt 278  Q
    ||||| ||||||| ||||||    
T  346071 gttaagcaaacatctttttt 346090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 195 - 301
Target Start/End: Complemental strand, 8314790 - 8314684
Alignment:
Q  195 aataaattcataaataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttttgttaaatatctt-gaa 293  Q
    |||||||||| |  |||||| ||||||||||||||||||||| |||| ||| || |||||||| |||||| |||||| ||||||  |||||||||| |||    
T  8314790 aataaattcaaatgtaattacctattataatccctatttttaaggttccttgaattattataatgttaactaaacat-tttttttctaaatatcttagaa 8314692  T
Q  294 taaaattt 301  Q
    ||||||||    
T  8314691 taaaattt 8314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 6705905 - 6705950
Alignment:
Q  161 aaaagggtgggaataaagttcacatggagatgtaaataaattcata 206  Q
    ||||||||||||||||||||| ||||||||||  ||||| ||||||    
T  6705905 aaaagggtgggaataaagttcccatggagatgagaataatttcata 6705950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 278
Target Start/End: Original strand, 21008208 - 21008237
Alignment:
Q  249 atattataaagttaaccaaacatatttttt 278  Q
    ||||||||||||||||||||||||||||||    
T  21008208 atattataaagttaaccaaacatatttttt 21008237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 78; Significance: 6e-36; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 201908 - 201740
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    |||||||| ||||||||||||||||| |  ||||| ||||| ||  | ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  201908 attttatttccgggtataaaatattcctgggaatagaaaaaatttcccaaggaaaagggtgggaataaagttcccatggagatgagaataaattcataaa 201809  T
Q  209 taa-ttatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttt 277  Q
    ||| ||| |||||||||||||||||||||||||| ||   |||| ||||||| |||||||||||||||||    
T  201808 taatttacctattataatccctatttttatggttcctaggaata-tataaagctaaccaaacatattttt 201740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 143596 - 143427
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||||||| |||||||| ||| |  ||||| ||||| ||  | ||  |||| |||||||||||||||| ||||||||||  ||||||||||||      
T  143596 attttattcccggatataaaatgttcctgggaatagaaaaaatttcccaaagaaaatggtgggaataaagttcccatggagatgagaataaattcatatg 143497  T
Q  209 taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    || ||| ||||||||||||||| |||||||||| ||   |||||||||||||||||||||||||||||||    
T  143496 tagttacctattataatccctaattttatggttcctaggaatattataaagttaaccaaacatatttttt 143427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 29040 - 29210
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatct-aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataa 207  Q
    |||||||||||||||||||||| ||| |  ||||| ||||| || ||| ||| ||||||||||||||||||||| |||||| |||  |||||||||||||    
T  29040 attttattcccgggtataaaatgttcctgggaatagaaaaaatt-tctcaaggaaaagggtgggaataaagttcccatggaaatgagaataaattcataa 29138  T
Q  208 ataattat-ctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatatttttt 278  Q
    ||| || | ||||||||||||||||||||||  || ||   |||||||||||| ||||||||||||||||||    
T  29139 atagttttcctattataatccctatttttataattcctaggaatattataaagctaaccaaacatatttttt 29210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 109 - 300
Target Start/End: Original strand, 3653 - 3845
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatct-aagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataa 207  Q
    |||||||||||| ||||||||| ||| |  ||||| |||| ||| ||| ||  |||| |||||||||||||||| |||||||||| ||||||| | ||      
T  3653 attttattcccgagtataaaatgttcctgggaatagaaaagttt-tctcaaagaaaatggtgggaataaagttcccatggagatgaaaataaaattatgt 3751  T
Q  208 ataattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttttgttaaatatctt-gaataaaatt 300  Q
     |||||| |||||||| |||||||||||| |||| |||  |||||||||| |||||| |||||| ||||||  |||||| ||| ||||||||||    
T  3752 gtaattacctattatattccctatttttaaggttccttggaatattataatgttaacgaaacattttttttcctaaataccttggaataaaatt 3845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 109 - 300
Target Start/End: Complemental strand, 4451 - 4257
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaattta-tctaagaaaaagggtgggaataaagttcacatggagatgtaaataaa-ttcata 206  Q
    |||||||||||| ||||||||| ||| |  ||||| |||| |||  || ||||||| || |||||||||||||| |||||||||| ||||||| || |||    
T  4451 attttattcccgagtataaaatgttcctgggaatagaaaagttttctcaaagaaaatgg-tgggaataaagttcccatggagatgaaaataaaattaata 4353  T
Q  207 aa-taattatctattataatccctatttttatggtttcttaaaatattataaagttaaccaaacatattttttgttaaatatctt-gaataaaatt 300  Q
       |||||| |||||||| |||||||||||| |||| |||  |||||||||| |||||| |||||| ||||||  |||||| ||| ||||||||||    
T  4352 gtgtaattacctattatattccctatttttaaggttccttggaatattataatgttaacgaaacattttttttcctaaataccttggaataaaatt 4257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 23384 - 23516
Alignment:
Q  109 attttattcccgggtataaaatattcttcagaatataaaaatttatctaagaaaaagggtgggaataaagttcacatggagatgtaaataaattcataaa 208  Q
    ||||||||| || ||||||||||||| |  |||||||||  ||| || ||  |||| |||||||||||||||  |||| ||||| ||||||||||||       
T  23384 attttattcacgagtataaaatattcctgggaatataaatttttttccaaagaaaacggtgggaataaagtttccatgaagatgaaaataaattcatgtg 23483  T
Q  209 taattatctattataatccctatttttatggtt 241  Q
    ||| || ||||||||||||||||||||| ||||    
T  23484 taactacctattataatccctatttttaaggtt 23516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University