View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2610_low_20 (Length: 367)
Name: NF2610_low_20
Description: NF2610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2610_low_20 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 338; Significance: 0; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 23587946 - 23588295
Alignment:
| Q |
1 |
ctcaaaccaccattgaaattgattcattgtttgagggtattgacttttacactaccatcactcgtgctcgttttgaagagctcaacatggatctgtttag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
23587946 |
ctcaaaccaccattgaaattgattcattgtttgagggtattgacttttacactaccatcactcgggctcgttttgaagagctcaacatggatctgtttag |
23588045 |
T |
|
| Q |
101 |
gaagtgtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattccc |
200 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
23588046 |
gaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtccatgatgttgttcttgttggtggatccactaggattccc |
23588145 |
T |
|
| Q |
201 |
aaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23588146 |
aaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctg |
23588245 |
T |
|
| Q |
301 |
ctattttgagtggtgagggcaatgagaaagtgcaggatctgttgttgctg |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23588246 |
ctattttgagtggtgagggcaatgagaaagtgcaggatctgttgttgctg |
23588295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 23596798 - 23597147
Alignment:
| Q |
1 |
ctcaaaccaccattgaaattgattcattgtttgagggtattgacttttacactaccatcactcgtgctcgttttgaagagctcaacatggatctgtttag |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
23596798 |
ctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacactaccattactcgcgctcgttttgaagagctcaacatggatctatttag |
23596897 |
T |
|
| Q |
101 |
gaagtgtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattccc |
200 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||| |
|
|
| T |
23596898 |
gaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgttgatgatgttgttcttgttggcggatcgactaggattccc |
23596997 |
T |
|
| Q |
201 |
aaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||| ||||| || || |||||||||| |
|
|
| T |
23596998 |
aaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctg |
23597097 |
T |
|
| Q |
301 |
ctattttgagtggtgagggcaatgagaaagtgcaggatctgttgttgctg |
350 |
Q |
| |
|
|||||||||| || || |||||||||||||| |||||||| ||||||||| |
|
|
| T |
23597098 |
ctattttgagcggcgaaggcaatgagaaagtacaggatcttttgttgctg |
23597147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 87 - 316
Target Start/End: Complemental strand, 54396292 - 54396063
Alignment:
| Q |
87 |
atggatctgtttaggaagtgtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggat |
186 |
Q |
| |
|
|||||| |||||||||| |||||||| |||||||||||||| | |||||||||||||| ||||||| ||| ||||| ||||||||||||||||||| |
|
|
| T |
54396292 |
atggatttgtttaggaaatgtatggaacctgttgagaagtgtctaagggatgctaagattgataagagtcatgttcatgaagttgttcttgttggtggat |
54396193 |
T |
|
| Q |
187 |
ccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggc |
286 |
Q |
| |
|
| || |||||||| || |||||||| |||||||| |||||||||||||| || |||||||| ||||| || ||||| |||||||||||||| ||||| || |
|
|
| T |
54396192 |
caacaaggattccaaaagttcaacagcttttgcaggatttcttcaatgggaaagagctttgcaagagtattaaccctgatgaagctgttgcttatggtgc |
54396093 |
T |
|
| Q |
287 |
agccgtccaagctgctattttgagtggtga |
316 |
Q |
| |
|
|| || ||||| || |||||||| ||||| |
|
|
| T |
54396092 |
tgctgttcaagcagcgattttgagcggtga |
54396063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 135 - 311
Target Start/End: Complemental strand, 35132278 - 35132101
Alignment:
| Q |
135 |
gatgctaagatggataagaaca-gtgtccatgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaat |
233 |
Q |
| |
|
|||||||||||||| |||| || | || |||| |||||||||||||| || || ||||||||||||| || || || || |||||| | || ||||| |
|
|
| T |
35132278 |
gatgctaagatggacaagagcaagggtagatgatgttgttcttgttggagggtcttctaggattcccaaagtgcagcagctattgcaaaactttttcaaa |
35132179 |
T |
|
| Q |
234 |
ggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgagt |
311 |
Q |
| |
|
|| |||||| | || |||||||| ||||||||||| ||||| || ||||||||||| || || |||||| | |||||| |
|
|
| T |
35132178 |
gggaaggagttgtgcaagagcattaaccccgatgaggctgtagcttatggggcagcagttcaggctgctttgttgagt |
35132101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 9336358 - 9336415
Alignment:
| Q |
255 |
atcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgagtg |
312 |
Q |
| |
|
|||||||| ||||| |||||||| ||||| ||||| || ||||||||||||||||||| |
|
|
| T |
9336358 |
atcaacccagatgaggctgttgcttatggtgcagctgttcaagctgctattttgagtg |
9336415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 312
Target Start/End: Complemental strand, 30775039 - 30774896
Alignment:
| Q |
169 |
ttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatga |
268 |
Q |
| |
|
|||||||||| ||||| || ||||||||||||| || || |||| |||| ||||||||||||| ||||| | || ||||||||||| || ||||| |
|
|
| T |
30775039 |
ttgttcttgtcggtggttcttctaggattcccaaagtgcaggaactattgcgtaatttcttcaatgggaaggatttgtgcaagagcatcaatcctgatga |
30774940 |
T |
|
| Q |
269 |
agctgttgcatatggggcagccgtccaagctgctattttgagtg |
312 |
Q |
| |
|
|| ||||| | |||||||| ||||| |||||| | ||||||| |
|
|
| T |
30774939 |
ggcagttgctcacggggcagctgtccaggctgctctattgagtg |
30774896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 3 - 328
Target Start/End: Complemental strand, 8102620 - 8102295
Alignment:
| Q |
3 |
caaaccaccattgaaattgattcattgtttgagggtattgacttttacactaccatcactcgtgctcgttttgaagagctcaacatggatctgtttagga |
102 |
Q |
| |
|
||||| |||||||| |||||||| |||||||||||| |||| |||||||| || ||||| ||||| | ||||| || || |||||||||||||| |||| |
|
|
| T |
8102620 |
caaactaccattgagattgattctttgtttgagggtgttgatttttacaccacaatcacccgtgccagatttgaggaacttaacatggatctgttcagga |
8102521 |
T |
|
| Q |
103 |
agtgtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaa |
202 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||||||||| |||| || || ||||| ||||||||||||||||| || |||||||||||||| |
|
|
| T |
8102520 |
agtgtatggagcctgttgagaagtgtttgagagatgctaagatggacaagagcacagttcatgatgttgttcttgttggtggttcaactaggattcccaa |
8102421 |
T |
|
| Q |
203 |
ggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgct |
302 |
Q |
| |
|
||||| ||||| |||||||| ||||||||||| |||||||| || || |||||||||||||| || |||||||| ||||| || || || ||||||||| |
|
|
| T |
8102420 |
agttcagcaactgttgcaagacttcttcaatggtaaggagctatgcaaaagcatcaaccccgacgaggctgttgcttatggtgccgctgttcaagctgct |
8102321 |
T |
|
| Q |
303 |
attttgagtggtgagggcaatgagaa |
328 |
Q |
| |
|
|| ||||||||||| || |||||||| |
|
|
| T |
8102320 |
atcttgagtggtgaaggaaatgagaa |
8102295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 8017628 - 8017950
Alignment:
| Q |
3 |
caaaccaccattgaaattgattcattgtttgagggtattgacttttacactaccatcactcgtgctcgttttgaagagctcaacatggatctgtttagga |
102 |
Q |
| |
|
||||| |||||||| |||||||| |||||||||||| |||| |||||||| || ||||| ||||| | ||||| || || |||||||||||||| || | |
|
|
| T |
8017628 |
caaactaccattgagattgattctttgtttgagggtgttgatttttacaccacaatcacccgtgcaagatttgaggaacttaacatggatctgttcagaa |
8017727 |
T |
|
| Q |
103 |
agtgtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaa |
202 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||||||||| |||||| ||| ||||| |||||||||||||| || || ||||| |||||||| |
|
|
| T |
8017728 |
agtgtatggagcctgttgagaagtgtttgagagatgctaagatggacaagaactctgttcatgatgttgttcttgttggcggttcaactagaattcccaa |
8017827 |
T |
|
| Q |
203 |
ggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgct |
302 |
Q |
| |
|
||||| ||||| |||||||||||||||||||| || |||||||| ||||| |||||||| || || |||||||| ||||| || || || ||||| || |
|
|
| T |
8017828 |
agttcagcaactgttgcaagatttcttcaatggtaaagagctttgcaagagtatcaacccagacgaggctgttgcttatggtgccgctgtacaagcagca |
8017927 |
T |
|
| Q |
303 |
attttgagtggtgagggcaatga |
325 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
8017928 |
attttgagtggtgaaggcaatga |
8017950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 6 - 340
Target Start/End: Complemental strand, 39985596 - 39985262
Alignment:
| Q |
6 |
accaccattgaaattgattcattgtttgagggtattgacttttacactaccatcactcgtgctcgttttgaagagctcaacatggatctgtttaggaagt |
105 |
Q |
| |
|
|||||||||||||||||||| | ||||| || ||||| || ||| | |||| |||||||| | ||||| ||||||||||||||||| ||||| || | |
|
|
| T |
39985596 |
accaccattgaaattgattctctttttgaaggaattgatttctactcccccattactcgtgcaagatttgaggagctcaacatggatctctttagaaaat |
39985497 |
T |
|
| Q |
106 |
gtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaaggt |
205 |
Q |
| |
|
|||||||||| |||||||| || ||||| ||||| |||||||| ||||| |||||||| || ||||| ||||| || || || || || ||||| ||||| |
|
|
| T |
39985496 |
gtatggagccagttgagaaatgtttgagagatgccaagatggacaagaaaagtgtccacgatgttgtccttgtaggaggttctaccagaattccaaaggt |
39985397 |
T |
|
| Q |
206 |
tcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctatt |
305 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||| || |||||||| || || ||||| |||||||||||||| || || || || |||||||| |
|
|
| T |
39985396 |
tcaacaacttttgcaagatttctttaacggaaaggagctatgcaagagcataaatcctgatgaggctgttgcatatggtgctgctgttcaggctgctatc |
39985297 |
T |
|
| Q |
306 |
ttgagtggtgagggcaatgagaaagtgcaggatct |
340 |
Q |
| |
|
||||||||||||||||||||||| || |||||||| |
|
|
| T |
39985296 |
ttgagtggtgagggcaatgagaaggttcaggatct |
39985262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 17260034 - 17259914
Alignment:
| Q |
163 |
atgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccc |
262 |
Q |
| |
|
|||| ||||| |||||||||||||| |||||||||| || || || ||||| ||||| ||||||||||| || ||||| | || |||||||||||||| |
|
|
| T |
17260034 |
atgatgttgtccttgttggtggatcttctaggattccgaaagtgcagcaactattgcaggatttcttcaagggtaaggaattatgcaagagcatcaaccc |
17259935 |
T |
|
| Q |
263 |
cgatgaagctgttgcatatgg |
283 |
Q |
| |
|
||||| |||||||| ||||| |
|
|
| T |
17259934 |
tgatgaggctgttgcttatgg |
17259914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 302
Target Start/End: Complemental strand, 8590458 - 8590292
Alignment:
| Q |
136 |
atgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatgg |
235 |
Q |
| |
|
||||||||||||| ||||||| ||| |||| ||||| ||||||||||| || ||||||||||||| || || || || |||||||| || || | || |
|
|
| T |
8590458 |
atgctaagatggacaagaacattgtagatgatgttgtacttgttggtggttcttctaggattcccaaagtgcagcagctattgcaagacttttttatggg |
8590359 |
T |
|
| Q |
236 |
aaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgct |
302 |
Q |
| |
|
||||| |||| || |||||||| || ||||| |||||||| ||||| ||||| || ||||||||| |
|
|
| T |
8590358 |
gaaggatctttacaatagcatcaatccagatgaggctgttgcttatggtgcagctgttcaagctgct |
8590292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 302
Target Start/End: Original strand, 7878080 - 7878247
Alignment:
| Q |
135 |
gatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
234 |
Q |
| |
|
||||||| |||||| ||||||| ||| |||| ||||| |||||||||||||| ||||||||| ||| || || || || ||||| || || || || | |
|
|
| T |
7878080 |
gatgctatgatggacaagaacaatgtagatgatgttgtacttgttggtggatcatctaggattctcaaagtgcagcagctattgcaggacttttttaagg |
7878179 |
T |
|
| Q |
235 |
gaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgct |
302 |
Q |
| |
|
| ||||| |||| | ||||||||||| |||||||||||||| ||||| ||||| || || |||||| |
|
|
| T |
7878180 |
ggaaggatatttgcagtagcatcaacccggatgaagctgttgcttatggtgcagctgttcaggctgct |
7878247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 312
Target Start/End: Complemental strand, 8576147 - 8575970
Alignment:
| Q |
135 |
gatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
234 |
Q |
| |
|
|||||||||||||| ||||| ||||| |||| ||||| ||||||||||| || |||||||||| || || ||| || || || || | ||||| | |
|
|
| T |
8576147 |
gatgctaagatggacaagaatagtgtagatgatgttgtccttgttggtggttcttctaggattcctaaagtgagacagctattacaggaggttttcaagg |
8576048 |
T |
|
| Q |
235 |
gaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgagtg |
312 |
Q |
| |
|
| ||||| | ||||||||||||||||| ||||| |||||||| ||||| || | |||||||||||| | ||||||| |
|
|
| T |
8576047 |
ggaaggaattatgtaagagcatcaaccctgatgaggctgttgcttatggtgctgttgtccaagctgctttgttgagtg |
8575970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 302
Target Start/End: Complemental strand, 6789330 - 6789166
Alignment:
| Q |
138 |
gctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaa |
237 |
Q |
| |
|
||||||||||| |||| | ||| |||| ||||| ||||||||||| || |||| |||||||| || |||||||| |||||||| | |||| |||| |
|
|
| T |
6789330 |
gctaagatggacaagagtattgtaaatgatgttgtccttgttggtgggtcttctagaattcccaaagtgcaacaactattgcaagaagttttcatgggaa |
6789231 |
T |
|
| Q |
238 |
aggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgct |
302 |
Q |
| |
|
|||| | || | |||||||||||| ||||| |||||||| || || ||||| ||||| |||||| |
|
|
| T |
6789230 |
aggatttgtgcatgagcatcaaccctgatgaggctgttgcttacggtgcagctgtccaggctgct |
6789166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 301
Target Start/End: Original strand, 8636718 - 8636856
Alignment:
| Q |
163 |
atgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccc |
262 |
Q |
| |
|
|||| ||||| ||||||||||| ||| |||||||||| ||||| || ||||| || || || | || || | ||||| || ||||||||||||||| | |
|
|
| T |
8636718 |
atgatgttgtccttgttggtggctcctctaggattccaaaggtgcagcaactattacaggacatttttaaggcgaaggaactgtgtaagagcatcaacgc |
8636817 |
T |
|
| Q |
263 |
cgatgaagctgttgcatatggggcagccgtccaagctgc |
301 |
Q |
| |
|
||||| |||||||| ||||| ||||| ||||| ||||| |
|
|
| T |
8636818 |
tgatgaggctgttgcttatggagcagcagtccaggctgc |
8636856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 283
Target Start/End: Complemental strand, 17267792 - 17267612
Alignment:
| Q |
103 |
agtgtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaa |
202 |
Q |
| |
|
|||| |||||| |||||||||||| | || ||||||||||| || |||| ||| || |||| ||||| ||||||||||| || |||||||||| || |
|
|
| T |
17267792 |
agtgcatggagattgttgagaagtgtcttagtgatgctaagattgacaagagcagagttgatgatgttgtccttgttggtgggtcttctaggattccgaa |
17267693 |
T |
|
| Q |
203 |
ggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatgg |
283 |
Q |
| |
|
|| || ||||| ||||| | |||||||| || ||||| | || || || |||||||| ||||| |||||||| ||||| |
|
|
| T |
17267692 |
agtgcagcaactattgcagaacttcttcaaggggaaggaattatgcaaaagtatcaaccctgatgaggctgttgcttatgg |
17267612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 302
Target Start/End: Complemental strand, 8609710 - 8609571
Alignment:
| Q |
163 |
atgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccc |
262 |
Q |
| |
|
|||| |||||||||||||| || || |||||||||| || || | || || ||||||| || |||||||||||||| | |||| |||||||||||| |
|
|
| T |
8609710 |
atgatgttgttcttgttggaggttcttctaggattccgaaagtgaagcagctactgcaagactttttcaatggaaaggatttgtgtatgagcatcaaccc |
8609611 |
T |
|
| Q |
263 |
cgatgaagctgttgcatatggggcagccgtccaagctgct |
302 |
Q |
| |
|
||||| || ||||| ||||| || || ||||| |||||| |
|
|
| T |
8609610 |
tgatgaggcggttgcttatggtgctgctgtccaggctgct |
8609571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 10494841 - 10494898
Alignment:
| Q |
255 |
atcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgagtg |
312 |
Q |
| |
|
|||||||| ||||| |||||||| ||||| ||||| || || |||||||||||||||| |
|
|
| T |
10494841 |
atcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtg |
10494898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 13333835 - 13333892
Alignment:
| Q |
255 |
atcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgagtg |
312 |
Q |
| |
|
|||||||| ||||| |||||||| ||||| ||||| || || |||||||||||||||| |
|
|
| T |
13333835 |
atcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtg |
13333892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 8570132 - 8570068
Alignment:
| Q |
135 |
gatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcc |
199 |
Q |
| |
|
|||||||||||||| ||||| ||||| |||| ||||| ||||||||||| || |||||||||| |
|
|
| T |
8570132 |
gatgctaagatggaaaagaatagtgtagatgatgttgtccttgttggtggttcttctaggattcc |
8570068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 81; Significance: 5e-38; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 283
Target Start/End: Original strand, 17648256 - 17648536
Alignment:
| Q |
3 |
caaaccaccattgaaattgattcattgtttgagggtattgacttttacactaccatcactcgtgctcgttttgaagagctcaacatggatctgtttagga |
102 |
Q |
| |
|
|||||||||||||||||||||| | || ||||| ||||| || | | | |||| |||||||| | ||||| ||||||||||||||||| ||||||| |
|
|
| T |
17648256 |
caaaccaccattgaaattgattgtctattcgagggaattgatttctgctcctccattactcgtgcaagatttgaggagctcaacatggatctctttagga |
17648355 |
T |
|
| Q |
103 |
agtgtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaa |
202 |
Q |
| |
|
| |||||||||| ||||||| || ||||| ||||||| |||||| || || ||||||||||| |||| ||||| || || || || || ||||| || |
|
|
| T |
17648356 |
aatgtatggagcaagttgagatatgtttgagagatgctaggatggacaaaaaaagtgtccatgatattgtccttgtaggcggttctacaagaattccaaa |
17648455 |
T |
|
| Q |
203 |
ggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatgg |
283 |
Q |
| |
|
|||||||||||| ||||| |||||||| | ||||||||||| || || ||||| || |||||||| |||||||||||||| |
|
|
| T |
17648456 |
ggttcaacaactattgcaggatttctttgacggaaaggagctatgcaatagcattaatcccgatgaggctgttgcatatgg |
17648536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 72 - 283
Target Start/End: Original strand, 17705997 - 17706207
Alignment:
| Q |
72 |
tttgaagagctcaacatggatctgtttaggaagtgtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttg |
171 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||||| |||||||| || ||||| |||||||||||||| || || ||||||||||| |||| |
|
|
| T |
17705997 |
tttgaagagctcaacatggatctctttaggaaatgtatggagcaagttgagaaatgtttgagagatgctaagatggacaaaaaaagtgtccatgatgttg |
17706096 |
T |
|
| Q |
172 |
ttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagc |
271 |
Q |
| |
|
| ||||| || || || || || ||||| ||||||||| ||| | |||| |||||||| | ||||||||||| || || ||||| || |||||||| || |
|
|
| T |
17706097 |
tccttgtaggaggttctaccagaattccaaaggttcaaaaac-tatgcaggatttctttgacggaaaggagctatgcaatagcattaatcccgatgaggc |
17706195 |
T |
|
| Q |
272 |
tgttgcatatgg |
283 |
Q |
| |
|
|||||||||||| |
|
|
| T |
17706196 |
tgttgcatatgg |
17706207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 283
Target Start/End: Original strand, 17716905 - 17717182
Alignment:
| Q |
6 |
accaccattgaaattgattcattgtttgagggtattgacttttacactaccatcactcgtgctcgttttgaagagctcaacatggatctgtttaggaagt |
105 |
Q |
| |
|
||||||||||||||||||| | |||||||| ||||| || || || |||| |||||||| | ||||||||||||||| ||||||| || ||| | | |
|
|
| T |
17716905 |
accaccattgaaattgattgtctatttgagggaattgatttctatacccccattactcgtgccagatttgaagagctcaacttggatctcttcagggaat |
17717004 |
T |
|
| Q |
106 |
gtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaaggt |
205 |
Q |
| |
|
||||||||| |||||||| || ||||| ||||| |||| | || ||||||||||| ||||| ||||| || || || || || ||||| ||||| |
|
|
| T |
17717005 |
gtatggagcaagttgagaaatgtttgagccatgctgggatgtacaaaggaagtgtccatgatgttgtccttgtaggaggttctaccagaattccaaaggt |
17717104 |
T |
|
| Q |
206 |
tcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatgg |
283 |
Q |
| |
|
||||||||| ||||| |||||||| || |||||||||| || |||||||| || |||||||| |||||||||||||| |
|
|
| T |
17717105 |
tcaacaactattgcaggatttctttaacagaaaggagctatgcaagagcattaatcccgatgaggctgttgcatatgg |
17717182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 72 - 244
Target Start/End: Original strand, 17666967 - 17667139
Alignment:
| Q |
72 |
tttgaagagctcaacatggatctgtttaggaagtgtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttg |
171 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||||| |||||||| || ||||| ||||||||||||| || | ||||||||||| |||| |
|
|
| T |
17666967 |
tttgaagagctcaacatggatctctttaggaaatgtatggagcaagttgagaaatgtttgagaaatgctaagatggacaaaagaagtgtccatgatgttg |
17667066 |
T |
|
| Q |
172 |
ttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagct |
244 |
Q |
| |
|
| ||||| || || || || || ||||| |||||||||||| | ||||| |||||||| || ||||||||||| |
|
|
| T |
17667067 |
tccttgtaggaggttctaccagaattccaaaggttcaacaattattgcaggatttctttaacggaaaggagct |
17667139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 277
Target Start/End: Original strand, 17622160 - 17622434
Alignment:
| Q |
3 |
caaaccaccattgaaattgattcattgtttgagggtattgacttttacactaccatcactcgtgctcgttttgaagagctcaacatggatctgtttagga |
102 |
Q |
| |
|
|||||||||||||||||||||| | || ||||| ||||| || | | | |||| |||||||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
17622160 |
caaaccaccattgaaattgattgtctattcgagggaattgatttctgctcccccattactcgtgccacatttgaaaagctcaacatggatctctttagga |
17622259 |
T |
|
| Q |
103 |
agtgtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaa |
202 |
Q |
| |
|
| |||||||||| |||||||| || ||||| |||||| |||||| || | ||||||||||| ||||| ||||| || || || || || ||||| || |
|
|
| T |
17622260 |
aatgtatggagcaagttgagaaatgtttgagaaatgctaggatggacaaaacaagtgtccatgatgttgtccttgtaggaggttctaccagaattccaaa |
17622359 |
T |
|
| Q |
203 |
ggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgc |
277 |
Q |
| |
|
|||||||||| | ||||| |||||||| || ||||||||||| || || ||||| || ||||| || |||||||| |
|
|
| T |
17622360 |
ggttcaacaattattgcaggatttctttaacggaaaggagctatgcaatagcattaatcccgacgaggctgttgc |
17622434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 283
Target Start/End: Original strand, 17718169 - 17718446
Alignment:
| Q |
6 |
accaccattgaaattgattcattgtttgagggtattgacttttacactaccatcactcgtgctcgttttgaagagctcaacatggatctgtttaggaagt |
105 |
Q |
| |
|
||||||||||||||||||| | |||||||| ||||| || || || |||| |||||||| | ||||||||||||||| ||||||| || ||| | | |
|
|
| T |
17718169 |
accaccattgaaattgattgtctatttgagggaattgatttctatacccccattactcgtgccagatttgaagagctcaacttggatctcttcagggaat |
17718268 |
T |
|
| Q |
106 |
gtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaaggt |
205 |
Q |
| |
|
||||||||| |||||||| || ||||| |||| |||| | || ||||||||||| ||||| ||||| || || || || | ||||| ||||| |
|
|
| T |
17718269 |
gtatggagcaagttgagaaatgtttgagacgtgctgggatgaacaaaggaagtgtccatgatgttgtccttgtaggaggttctaccaaaattccaaaggt |
17718368 |
T |
|
| Q |
206 |
tcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatgg |
283 |
Q |
| |
|
||||||||| | ||| ||| |||| || |||||||| || || |||||||| || |||||||| |||||||||||||| |
|
|
| T |
17718369 |
tcaacaactatggcaggatgtctttaacggaaaggatctatgcaagagcattaatcccgatgaggctgttgcatatgg |
17718446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 283
Target Start/End: Original strand, 17704270 - 17704550
Alignment:
| Q |
3 |
caaaccaccattgaaattgattcattgtttgagggtattgacttttacactaccatcactcgtgctcgttttgaagagctcaacatggatctgtttagga |
102 |
Q |
| |
|
||||||||||||||||||| || || || |||| || || || | ||| | ||| |||||||| | ||||||||||||||||||||||| |||| || |
|
|
| T |
17704270 |
caaaccaccattgaaattgtttgtttattcaagggaatggatttcttcaccatcattactcgtgccagatttgaagagctcaacatggatctctttatga |
17704369 |
T |
|
| Q |
103 |
agtgtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaa |
202 |
Q |
| |
|
| ||||||||| |||| ||||| ||||| ||||| |||||| || | ||||||||||| ||||| ||||| || || || || || ||||| || |
|
|
| T |
17704370 |
aatgtatggagactgtcgagaaacttttgagatttgctaggatggacaaaacaagtgtccatgatgttgtccttgtaggaggttctaccagaattccaaa |
17704469 |
T |
|
| Q |
203 |
ggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatgg |
283 |
Q |
| |
|
|||||||||||| ||||| |||||||| || ||||| |||| || | ||||| || ||||| || | |||||||||||| |
|
|
| T |
17704470 |
ggttcaacaactattgcaggatttctttaacagaaagaagctatgcgatagcattaatcccgacgaggttgttgcatatgg |
17704550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 312
Target Start/End: Original strand, 16657892 - 16658041
Alignment:
| Q |
163 |
atgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccc |
262 |
Q |
| |
|
|||||||||||||||| ||||| || ||||||||||||| || || | || |||||||| || ||||| || ||||| | || || || |||||||| |
|
|
| T |
16657892 |
atgacgttgttcttgtgggtggctcatctaggattcccaaagtgcaggatctattgcaagactttttcaagggcaaggatttatgcaaaagtatcaaccc |
16657991 |
T |
|
| Q |
263 |
cgatgaagctgttgcatatggggcagccgtccaagctgctattttgagtg |
312 |
Q |
| |
|
|||||||||||||| || || ||||| || ||||||||||||||||||| |
|
|
| T |
16657992 |
ggatgaagctgttgcttacggtgcagctgttcaagctgctattttgagtg |
16658041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 16662429 - 16662516
Alignment:
| Q |
225 |
ttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgagtg |
312 |
Q |
| |
|
||||||||||| |||||| | || |||||||||||||| ||||| |||||||| ||||||||||| || ||||||||| | ||||||| |
|
|
| T |
16662429 |
ttcttcaatgggaaggagttgtgcaagagcatcaaccctgatgaggctgttgcttatggggcagctgtgcaagctgctgtgttgagtg |
16662516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 311
Target Start/End: Original strand, 12245787 - 12245929
Alignment:
| Q |
169 |
ttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatga |
268 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||| || ||||| || || || || || ||||| || ||||| | || |||||||| ||||| || || |
|
|
| T |
12245787 |
ttgtacttgttggtggatcttctaggattcccaaagtccaacagctattacaggactttttcaacgggaaggaattgtgcaagagcattaaccctgacga |
12245886 |
T |
|
| Q |
269 |
agctgttgcatatggggcagccgtccaagctgctattttgagt |
311 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||| | |||||| |
|
|
| T |
12245887 |
ggctgttgcttatggggcagctgttcaagctgctttgttgagt |
12245929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 11999200 - 11999052
Alignment:
| Q |
163 |
atgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccc |
262 |
Q |
| |
|
|||| ||||| |||||||||||||| ||||||| ||||| || ||||| || || || || || ||||| || |||||| | || |||||||| ||||| |
|
|
| T |
11999200 |
atgatgttgtacttgttggtggatcttctaggat-cccaaagtccaacagctattacatgactttttcaacgggaaggagttgtgcaagagcattaaccc |
11999102 |
T |
|
| Q |
263 |
cgatgaagctgttgcatatggggcagccgtccaagctgctattttgagtg |
312 |
Q |
| |
|
||||| ||||| || ||||||||||| || ||||||||| | ||||||| |
|
|
| T |
11999101 |
tgatgaggctgtagcttatggggcagctgttcaagctgctttgttgagtg |
11999052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 311
Target Start/End: Complemental strand, 43625116 - 43625057
Alignment:
| Q |
252 |
agcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgagt |
311 |
Q |
| |
|
||||| ||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||||||| |
|
|
| T |
43625116 |
agcataaaccctgatgaggctgttgcttatggtgcagctgtccaggctgctattttgagt |
43625057 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 312
Target Start/End: Complemental strand, 14703229 - 14703052
Alignment:
| Q |
135 |
gatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
234 |
Q |
| |
|
|||||||||||||| |||| || || |||| ||||||||||| ||||| || || |||||||||| || || ||| | || || || || ||| | | |
|
|
| T |
14703229 |
gatgctaagatggacaagagtagagtagatgatgttgttcttgtcggtgggtcttctcggattcccaaagtacagcaattattacaggactttttccagg |
14703130 |
T |
|
| Q |
235 |
gaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgagtg |
312 |
Q |
| |
|
| |||||| | || || ||||| ||||| ||||||||||| || ||||||||||| || || |||||| | ||||||| |
|
|
| T |
14703129 |
ggaaggagttgtgcaacagcattaaccctgatgaagctgtagcttatggggcagctgttcaggctgctttgttgagtg |
14703052 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 312
Target Start/End: Complemental strand, 15594855 - 15594678
Alignment:
| Q |
135 |
gatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
234 |
Q |
| |
|
|||||||||||| |||||| ||||| |||| |||| |||||||||| || ||||||||||||| || |||||||| ||| | ||||| ||| | | |
|
|
| T |
15594855 |
gatgctaagatgaataagagtagtgtaaatgatattgtcattgttggtgggtcttctaggattcccaaagtgcaacaactattgaaggattttttcgagg |
15594756 |
T |
|
| Q |
235 |
gaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgagtg |
312 |
Q |
| |
|
||||||| | || | |||||||||||| ||||| |||||||| ||||| ||||| ||||| |||||| | ||||||| |
|
|
| T |
15594755 |
gaaaggaattgtgcatgagcatcaaccctgatgaggctgttgcttatggtgcagctgtccaggctgctttgttgagtg |
15594678 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 310
Target Start/End: Original strand, 4679018 - 4679079
Alignment:
| Q |
249 |
aagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgag |
310 |
Q |
| |
|
||||| |||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
4679018 |
aagagtatcaacccagatgaggctgttgcttatggtgcagctatccaagctgctattttgag |
4679079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 311
Target Start/End: Original strand, 34467135 - 34467311
Alignment:
| Q |
135 |
gatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
234 |
Q |
| |
|
|||||||||||||| | || ||||| ||||| | ||| ||||| || || || ||||||||||||| || || || || |||| || || ||||||| |
|
|
| T |
34467135 |
gatgctaagatggacacgagtagtgtgcatgatgctgtccttgtcgggggctcttctaggattcccaaagtgcagcagctattgcgggactttttcaatg |
34467234 |
T |
|
| Q |
235 |
gaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgagt |
311 |
Q |
| |
|
| ||||| || || || ||||||||||| ||||| ||||| || |||| ||||| || ||||||||| | |||||| |
|
|
| T |
34467235 |
gtaaggatctatgcaatagcatcaaccctgatgaggctgtcgcttatgtcgcagctgtgcaagctgctttgttgagt |
34467311 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 312
Target Start/End: Complemental strand, 12528358 - 12528148
Alignment:
| Q |
102 |
aagtgtatggagcctgttgagaagtgcttgagggatgctaagatggataagaacagtgtccatgacgttgttcttgttggtggatccactaggattccca |
201 |
Q |
| |
|
|||||||||||| | ||||| | || |||| |||||||||||||| |||| ||||| |||| |||| ||||||||||| || |||||||||||| |
|
|
| T |
12528358 |
aagtgtatggagaccgttgaaagttgtttgaccgatgctaagatggacaagagtagtgtagatgatattgtacttgttggtggctcgtctaggattccca |
12528259 |
T |
|
| Q |
202 |
aggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccccgatgaagctgttgcatatggggcagccgtccaagctgc |
301 |
Q |
| |
|
| || | || || ||||| || || ||||| || |||||| | | |||||||||||||| ||||| |||||||| ||||| || || || || ||||| |
|
|
| T |
12528258 |
aagtgaagcagctattgcaggagtttttcaagggcaaggagttatacaagagcatcaaccctgatgaggctgttgcttatggtgccgctgttcaggctgc |
12528159 |
T |
|
| Q |
302 |
tattttgagtg |
312 |
Q |
| |
|
| | ||||||| |
|
|
| T |
12528158 |
tttgttgagtg |
12528148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 42325181 - 42325255
Alignment:
| Q |
169 |
ttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagc |
243 |
Q |
| |
|
||||||||||||||||| ||| |||||||| ||||| |||||||||||| | |||| ||| |||||||||||| |
|
|
| T |
42325181 |
ttgttcttgttggtggaagcacaaggattccaaaggtacaacaacttttgaaggattactttgatggaaaggagc |
42325255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 42273062 - 42273136
Alignment:
| Q |
169 |
ttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagc |
243 |
Q |
| |
|
||||||||||||||||| ||| |||||||| ||||| |||||||| ||| | |||| ||| |||||||||||| |
|
|
| T |
42273062 |
ttgttcttgttggtggaagcacaaggattccaaaggtacaacaactcttgaaggattactttgatggaaaggagc |
42273136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 43744610 - 43744552
Alignment:
| Q |
162 |
catgacgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgca |
220 |
Q |
| |
|
||||| ||||||||||||||||| ||| |||||||||| || || |||||||| ||||| |
|
|
| T |
43744610 |
catgatgttgttcttgttggtggctcctctaggattccaaaagtacaacaactattgca |
43744552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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