View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2610_low_32 (Length: 271)
Name: NF2610_low_32
Description: NF2610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2610_low_32 |
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Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 28030557 - 28030798
Alignment:
| Q |
11 |
gagaagaaggaatgaaagaaagtgacctaaatggttccacctgagcaattttgagaatgaagagaatttgttatagcgagtagagtggagagaagaacag |
110 |
Q |
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| T |
28030557 |
gagaagaaggaatgaaagaaagtgacctaaatggttc-acctgagcaattttgagaatgaagagaatttgtta--gcgagtagagtggagagaagaacag |
28030653 |
T |
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| Q |
111 |
ttactca----ggttatatctgaacgtttatgataatccaatttgttaaggatttcagcaaaagtaggattccttatttttctaattatccgtttagcat |
206 |
Q |
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| T |
28030654 |
ttactcacttaggttatatctgaacgtttaagataatccaatttgttaaggatttcagcaaaagtaggattccttaattttctaattatccgtttagcat |
28030753 |
T |
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| Q |
207 |
agagacctattcatccgtatatattgctctcttagccttatggat |
251 |
Q |
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| T |
28030754 |
agagacctattcatccgtatatattgctctcttagctttatggat |
28030798 |
T |
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