View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2612_low_3 (Length: 257)
Name: NF2612_low_3
Description: NF2612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2612_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 5364738 - 5364510
Alignment:
| Q |
11 |
cacagaacttgcataggatacataaccaaacctagcatatacatccaacaaagtcgtcataacgtgaacatgtccttcatagccatgtcgcagaatatga |
110 |
Q |
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| T |
5364738 |
cacagaacttgcataggatacataaccaaacctagcatatacatccaacaaagtcgtcataacgtgaacatgtccttcatagccatgtcgcagaatatga |
5364639 |
T |
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| Q |
111 |
gcatgaatctccttacccttccgaagaggacaaattgacaactccgaaacaacacaagctttaagaacatacgtatacgtgaacctgttcgatgggatcc |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5364638 |
gcatgaatctccttacccttccgaagaggacaaattgacaactccgaaacaacacaagctttaagaacatacgtatacgtgaacctgttcgatgggatcc |
5364539 |
T |
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| Q |
211 |
caatccaattcatctgaccatacaatact |
239 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
5364538 |
caatccaattcatctgaccatacaatact |
5364510 |
T |
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