View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2615_low_10 (Length: 320)
Name: NF2615_low_10
Description: NF2615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2615_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 45108306 - 45108621
Alignment:
| Q |
1 |
ttattattattattatggtgagggtaaatat----atagttaccatcatttgtgaaatgagcttgggtaaacccaacttcttgataggaaaattgatagc |
96 |
Q |
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| T |
45108306 |
ttattattattattatggtgagggtaaatatatatatagttaccatcatttgtgaaatgagcttgggtaaacccaactgcttgataggaaaattgatagc |
45108405 |
T |
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| Q |
97 |
ccttgttgtgacataaattagaatgacttgatgaagaaatactgggaaagaggacctgaatggactcccttcggtctcatgttttccccatatgccatgg |
196 |
Q |
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| T |
45108406 |
ccttgttgtgacataaattagaatgacttgatgaagaaatactgggaaagaggacctgaatggactcccttcggactcatgttttccccatatgccatgg |
45108505 |
T |
|
| Q |
197 |
gagagaatattaggcggggtggaaatgcaaacattatagttcagaagattagaattaataacattgttggacatggacgtttcattcatagatttaaata |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
45108506 |
gagagaatattaggcggggtggaaatgcaaacattatagtttagaagattagaattaacaacattgttggacatggacgtttcattcatagatttaaata |
45108605 |
T |
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| Q |
297 |
atgtatcatctgtgct |
312 |
Q |
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|||||||||||||||| |
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| T |
45108606 |
atgtatcatctgtgct |
45108621 |
T |
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