View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2615_low_4 (Length: 521)

Name: NF2615_low_4
Description: NF2615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2615_low_4
NF2615_low_4
[»] chr2 (40 HSPs)
chr2 (60-515)||(12940950-12941405)
chr2 (18-129)||(18840986-18841097)
chr2 (45-129)||(20539674-20539758)
chr2 (39-129)||(19536391-19536482)
chr2 (24-139)||(30404829-30404944)
chr2 (18-123)||(2438692-2438795)
chr2 (40-126)||(18421941-18422027)
chr2 (45-126)||(36756344-36756425)
chr2 (38-126)||(15972851-15972939)
chr2 (39-130)||(20473296-20473387)
chr2 (45-115)||(12668423-12668493)
chr2 (26-98)||(5367198-5367270)
chr2 (24-96)||(29176472-29176544)
chr2 (40-130)||(20242722-20242812)
chr2 (39-97)||(34691799-34691857)
chr2 (39-97)||(34714211-34714269)
chr2 (42-124)||(37558957-37559039)
chr2 (38-126)||(6940233-6940321)
chr2 (45-129)||(15657839-15657923)
chr2 (43-129)||(23718001-23718087)
chr2 (43-129)||(24105673-24105759)
chr2 (46-130)||(14996224-14996309)
chr2 (45-130)||(30335391-30335476)
chr2 (46-130)||(11223864-11223948)
chr2 (24-76)||(28596497-28596549)
chr2 (45-125)||(30717530-30717610)
chr2 (18-118)||(38117132-38117232)
chr2 (45-104)||(974747-974806)
chr2 (58-129)||(21616737-21616808)
chr2 (18-76)||(12224251-12224309)
chr2 (39-128)||(21624242-21624332)
chr2 (59-124)||(16069268-16069333)
chr2 (55-124)||(21374709-21374778)
chr2 (45-129)||(23058442-23058527)
chr2 (44-97)||(28677916-28677968)
chr2 (57-129)||(29663984-29664057)
chr2 (45-130)||(34784982-34785067)
chr2 (24-96)||(18570980-18571052)
chr2 (40-96)||(23921261-23921317)
chr2 (55-123)||(24894370-24894438)
[»] chr3 (52 HSPs)
chr3 (24-129)||(26492184-26492289)
chr3 (45-130)||(14216866-14216951)
chr3 (45-130)||(14222995-14223080)
chr3 (39-129)||(8383232-8383322)
chr3 (18-124)||(10954932-10955038)
chr3 (18-129)||(28917976-28918089)
chr3 (24-126)||(55401053-55401155)
chr3 (38-129)||(10335279-10335370)
chr3 (39-128)||(16000010-16000099)
chr3 (41-129)||(8587017-8587105)
chr3 (45-129)||(15796294-15796378)
chr3 (18-118)||(20503451-20503551)
chr3 (45-129)||(41961650-41961734)
chr3 (58-121)||(29112293-29112356)
chr3 (39-97)||(7928457-7928515)
chr3 (48-138)||(26508076-26508166)
chr3 (18-76)||(40993308-40993366)
chr3 (45-129)||(750618-750703)
chr3 (41-86)||(23657757-23657802)
chr3 (47-98)||(17005621-17005672)
chr3 (50-129)||(35312029-35312108)
chr3 (63-129)||(3164043-3164109)
chr3 (38-124)||(10318028-10318113)
chr3 (46-124)||(22774071-22774149)
chr3 (39-96)||(25775516-25775574)
chr3 (42-124)||(33359741-33359823)
chr3 (40-121)||(51206348-51206427)
chr3 (24-129)||(7171477-7171581)
chr3 (45-97)||(25948887-25948939)
chr3 (58-98)||(29508450-29508490)
chr3 (58-125)||(11493374-11493441)
chr3 (40-130)||(15505785-15505876)
chr3 (45-96)||(16789020-16789071)
chr3 (58-121)||(23870572-23870635)
chr3 (45-104)||(34910317-34910376)
chr3 (55-117)||(4987301-4987363)
chr3 (40-126)||(10268481-10268567)
chr3 (61-139)||(14979146-14979224)
chr3 (44-118)||(21479104-21479178)
chr3 (24-74)||(25093532-25093582)
chr3 (39-129)||(35994733-35994821)
chr3 (40-129)||(24205037-24205125)
chr3 (24-97)||(45451560-45451633)
chr3 (45-97)||(1509546-1509598)
chr3 (24-76)||(3631712-3631764)
chr3 (45-97)||(8039835-8039887)
chr3 (38-94)||(8789543-8789599)
chr3 (45-129)||(9800015-9800099)
chr3 (45-129)||(14829665-14829748)
chr3 (49-117)||(21256990-21257058)
chr3 (45-121)||(28812499-28812574)
chr3 (45-97)||(49651786-49651838)
[»] chr4 (41 HSPs)
chr4 (18-139)||(12797311-12797431)
chr4 (18-106)||(28964221-28964309)
chr4 (18-129)||(23292959-23293070)
chr4 (24-124)||(40179615-40179715)
chr4 (38-146)||(54580016-54580118)
chr4 (45-130)||(19482642-19482727)
chr4 (24-129)||(35157964-35158069)
chr4 (18-97)||(29205451-29205530)
chr4 (24-99)||(7377374-7377451)
chr4 (25-126)||(12895254-12895355)
chr4 (24-129)||(21945478-21945583)
chr4 (24-76)||(16073422-16073474)
chr4 (38-129)||(49431000-49431092)
chr4 (24-105)||(4157149-4157229)
chr4 (45-130)||(30838184-30838269)
chr4 (38-97)||(8423711-8423770)
chr4 (55-130)||(27706187-27706262)
chr4 (44-118)||(15029751-15029825)
chr4 (24-118)||(34306783-34306876)
chr4 (55-129)||(40481612-40481685)
chr4 (60-121)||(4383351-4383411)
chr4 (24-97)||(38846991-38847064)
chr4 (66-130)||(11651155-11651219)
chr4 (45-129)||(16303266-16303350)
chr4 (58-142)||(22440613-22440697)
chr4 (45-124)||(30298926-30299006)
chr4 (45-124)||(30327794-30327874)
chr4 (24-76)||(35161064-35161116)
chr4 (38-97)||(2361968-2362027)
chr4 (21-80)||(8402718-8402777)
chr4 (58-129)||(36635299-36635370)
chr4 (46-96)||(6863161-6863211)
chr4 (55-129)||(14126121-14126195)
chr4 (39-76)||(482232-482269)
chr4 (47-124)||(6485613-6485690)
chr4 (33-74)||(20950415-20950456)
chr4 (39-76)||(42640557-42640594)
chr4 (24-76)||(4157464-4157516)
chr4 (45-97)||(11596352-11596404)
chr4 (45-73)||(19312366-19312394)
chr4 (45-97)||(35952617-35952669)
[»] chr6 (54 HSPs)
chr6 (45-128)||(3398595-3398677)
chr6 (38-129)||(34595109-34595200)
chr6 (45-130)||(8365519-8365604)
chr6 (38-129)||(8776966-8777057)
chr6 (18-124)||(28152079-28152184)
chr6 (40-129)||(7938091-7938180)
chr6 (45-139)||(10770674-10770768)
chr6 (45-129)||(16766672-16766756)
chr6 (38-129)||(16833283-16833374)
chr6 (39-129)||(426508-426598)
chr6 (38-124)||(17841582-17841668)
chr6 (24-97)||(7265572-7265645)
chr6 (40-129)||(7977825-7977914)
chr6 (21-128)||(4877918-4878026)
chr6 (45-129)||(9107370-9107454)
chr6 (45-129)||(12696299-12696383)
chr6 (38-129)||(853852-853943)
chr6 (40-97)||(21924930-21924987)
chr6 (46-126)||(19044442-19044522)
chr6 (38-129)||(6898274-6898365)
chr6 (46-129)||(15489733-15489816)
chr6 (55-126)||(17435177-17435248)
chr6 (38-97)||(28715302-28715361)
chr6 (24-94)||(13364684-13364754)
chr6 (18-76)||(32978872-32978930)
chr6 (45-118)||(7723250-7723323)
chr6 (44-117)||(7801155-7801228)
chr6 (40-129)||(13360367-13360456)
chr6 (39-128)||(13851712-13851801)
chr6 (45-129)||(9027153-9027237)
chr6 (58-130)||(9658853-9658925)
chr6 (33-97)||(19040359-19040423)
chr6 (38-141)||(23771541-23771644)
chr6 (45-121)||(31384903-31384979)
chr6 (43-130)||(6327516-6327603)
chr6 (57-124)||(16388245-16388311)
chr6 (33-76)||(26402668-26402711)
chr6 (38-97)||(33001282-33001341)
chr6 (40-94)||(1700362-1700416)
chr6 (39-129)||(5732504-5732594)
chr6 (39-77)||(16388211-16388249)
chr6 (55-124)||(17302536-17302606)
chr6 (47-97)||(24138433-24138483)
chr6 (39-96)||(403858-403915)
chr6 (55-128)||(1681734-1681807)
chr6 (24-97)||(12627556-12627629)
chr6 (83-128)||(31563838-31563883)
chr6 (45-78)||(34197137-34197170)
chr6 (45-97)||(7996378-7996430)
chr6 (45-97)||(8022371-8022423)
chr6 (45-97)||(9025494-9025546)
chr6 (55-127)||(17341674-17341746)
chr6 (33-96)||(31579215-31579276)
chr6 (45-129)||(34073347-34073431)
[»] chr8 (35 HSPs)
chr8 (35-129)||(20873044-20873138)
chr8 (38-124)||(36450747-36450833)
chr8 (45-121)||(15816129-15816205)
chr8 (38-99)||(4948657-4948718)
chr8 (48-129)||(25192350-25192431)
chr8 (45-129)||(2572056-2572140)
chr8 (45-129)||(22651951-22652035)
chr8 (40-138)||(3677751-3677850)
chr8 (46-129)||(4673426-4673509)
chr8 (18-121)||(5813575-5813678)
chr8 (47-129)||(29510306-29510388)
chr8 (24-129)||(31556972-31557076)
chr8 (18-129)||(926761-926872)
chr8 (39-129)||(8343291-8343381)
chr8 (41-127)||(18170478-18170564)
chr8 (41-127)||(18634046-18634132)
chr8 (40-121)||(34897068-34897149)
chr8 (45-97)||(25566848-25566900)
chr8 (66-130)||(41838144-41838208)
chr8 (38-97)||(3025558-3025617)
chr8 (45-104)||(8342972-8343031)
chr8 (58-124)||(14134679-14134745)
chr8 (39-97)||(24613528-24613585)
chr8 (43-97)||(30077385-30077439)
chr8 (58-128)||(36934646-36934716)
chr8 (40-97)||(13844591-13844648)
chr8 (24-97)||(18407726-18407799)
chr8 (38-95)||(40332200-40332257)
chr8 (38-118)||(4786331-4786411)
chr8 (41-97)||(12606825-12606881)
chr8 (45-129)||(13436964-13437048)
chr8 (46-118)||(20679396-20679468)
chr8 (37-97)||(31236569-31236629)
chr8 (24-96)||(33405363-33405435)
chr8 (25-96)||(41831915-41831991)
[»] scaffold0053 (1 HSPs)
scaffold0053 (24-129)||(8773-8878)
[»] chr1 (53 HSPs)
chr1 (24-124)||(46348362-46348462)
chr1 (24-122)||(22515866-22515964)
chr1 (45-126)||(1486709-1486790)
chr1 (24-128)||(16927165-16927268)
chr1 (25-120)||(37598816-37598910)
chr1 (33-124)||(38078649-38078740)
chr1 (41-128)||(42359445-42359532)
chr1 (46-139)||(28273089-28273182)
chr1 (38-118)||(22881609-22881689)
chr1 (18-121)||(1815240-1815343)
chr1 (45-118)||(24577186-24577259)
chr1 (41-129)||(5927336-5927424)
chr1 (45-129)||(7918211-7918295)
chr1 (58-129)||(398778-398849)
chr1 (45-124)||(18556456-18556535)
chr1 (24-118)||(36878447-36878541)
chr1 (24-97)||(51410031-51410105)
chr1 (18-95)||(18337338-18337415)
chr1 (40-97)||(40181878-40181935)
chr1 (45-130)||(47989472-47989556)
chr1 (24-96)||(21530697-21530769)
chr1 (39-119)||(31672889-31672969)
chr1 (24-96)||(40258912-40258984)
chr1 (45-129)||(5944256-5944342)
chr1 (45-104)||(6332671-6332729)
chr1 (18-73)||(19637799-19637854)
chr1 (45-127)||(9629900-9629982)
chr1 (52-130)||(34298410-34298488)
chr1 (39-139)||(19058850-19058951)
chr1 (37-118)||(35702580-35702661)
chr1 (39-80)||(52903273-52903314)
chr1 (45-129)||(6612171-6612255)
chr1 (25-129)||(8842694-8842798)
chr1 (38-98)||(14332635-14332695)
chr1 (50-129)||(48450592-48450671)
chr1 (45-114)||(113289-113358)
chr1 (39-96)||(1864874-1864931)
chr1 (38-139)||(5898259-5898360)
chr1 (39-76)||(24334699-24334736)
chr1 (45-130)||(25272456-25272541)
chr1 (55-104)||(32434726-32434775)
chr1 (40-129)||(39130762-39130851)
chr1 (45-129)||(40917726-40917808)
chr1 (45-97)||(1704992-1705044)
chr1 (45-129)||(5376500-5376584)
chr1 (59-122)||(9033021-9033085)
chr1 (55-139)||(14359532-14359615)
chr1 (45-129)||(20157350-20157434)
chr1 (47-135)||(21378547-21378635)
chr1 (57-97)||(23531790-23531830)
chr1 (40-76)||(30749868-30749904)
chr1 (40-76)||(30771319-30771355)
chr1 (45-118)||(31694710-31694785)
[»] chr5 (42 HSPs)
chr5 (40-129)||(21191051-21191140)
chr5 (39-129)||(6247597-6247687)
chr5 (45-129)||(13287399-13287483)
chr5 (24-96)||(28588653-28588725)
chr5 (45-121)||(39698524-39698600)
chr5 (55-129)||(15405065-15405137)
chr5 (18-97)||(30502361-30502440)
chr5 (18-97)||(30542704-30542783)
chr5 (37-129)||(14422879-14422969)
chr5 (46-119)||(21351906-21351979)
chr5 (44-129)||(15382452-15382539)
chr5 (45-129)||(21522725-21522809)
chr5 (45-129)||(21533291-21533375)
chr5 (38-139)||(21576738-21576841)
chr5 (35-75)||(26312798-26312838)
chr5 (45-120)||(10298553-10298628)
chr5 (40-115)||(33178014-33178089)
chr5 (46-129)||(36642763-36642846)
chr5 (42-120)||(8420011-8420089)
chr5 (50-124)||(14674249-14674323)
chr5 (45-99)||(40131626-40131680)
chr5 (55-129)||(4105232-4105308)
chr5 (40-129)||(6326292-6326381)
chr5 (45-130)||(21542004-21542089)
chr5 (83-139)||(6072352-6072408)
chr5 (33-124)||(6770523-6770612)
chr5 (57-129)||(22013389-22013461)
chr5 (41-129)||(24906297-24906385)
chr5 (38-94)||(43564891-43564947)
chr5 (15-94)||(18421811-18421890)
chr5 (18-97)||(23012381-23012460)
chr5 (33-76)||(42029780-42029823)
chr5 (38-76)||(15884016-15884054)
chr5 (55-129)||(25863179-25863253)
chr5 (60-126)||(41995449-41995515)
chr5 (18-118)||(31084309-31084414)
chr5 (40-97)||(42893367-42893424)
chr5 (55-124)||(43001780-43001849)
chr5 (40-76)||(2548415-2548451)
chr5 (45-97)||(7677712-7677764)
chr5 (64-128)||(19552562-19552626)
chr5 (86-126)||(41558724-41558764)
[»] chr7 (40 HSPs)
chr7 (38-122)||(1401007-1401091)
chr7 (24-129)||(33994187-33994292)
chr7 (24-124)||(15680789-15680889)
chr7 (38-130)||(26733278-26733370)
chr7 (36-129)||(25481877-25481970)
chr7 (45-129)||(24339617-24339701)
chr7 (45-129)||(27945016-27945100)
chr7 (46-105)||(13300409-13300468)
chr7 (24-123)||(21880133-21880232)
chr7 (18-129)||(21864781-21864894)
chr7 (45-126)||(5409836-5409917)
chr7 (19-123)||(7197271-7197375)
chr7 (24-104)||(8234146-8234226)
chr7 (45-129)||(43027469-43027553)
chr7 (39-126)||(11061070-11061157)
chr7 (46-113)||(11665441-11665508)
chr7 (64-138)||(2034407-2034481)
chr7 (44-138)||(24105644-24105738)
chr7 (39-128)||(3721070-3721158)
chr7 (45-129)||(5235961-5236045)
chr7 (45-129)||(13770666-13770750)
chr7 (25-97)||(20549798-20549870)
chr7 (45-104)||(3991324-3991383)
chr7 (53-104)||(11831432-11831483)
chr7 (45-96)||(11890919-11890970)
chr7 (45-128)||(21140982-21141065)
chr7 (33-76)||(39138472-39138515)
chr7 (30-117)||(41020483-41020570)
chr7 (45-99)||(7058431-7058485)
chr7 (40-118)||(42720885-42720963)
chr7 (45-118)||(6630912-6630985)
chr7 (45-118)||(9408334-9408407)
chr7 (45-126)||(10042915-10042996)
chr7 (45-126)||(18013074-18013155)
chr7 (40-117)||(40287352-40287428)
chr7 (18-130)||(598182-598294)
chr7 (45-97)||(19992008-19992060)
chr7 (24-76)||(25956473-25956525)
chr7 (49-97)||(26033465-26033513)
chr7 (45-117)||(35861951-35862023)
[»] scaffold0018 (1 HSPs)
scaffold0018 (46-129)||(178819-178903)
[»] scaffold0223 (1 HSPs)
scaffold0223 (45-129)||(20147-20231)
[»] scaffold0050 (1 HSPs)
scaffold0050 (24-96)||(70286-70358)
[»] scaffold0003 (1 HSPs)
scaffold0003 (45-129)||(241569-241653)
[»] scaffold0652 (1 HSPs)
scaffold0652 (38-128)||(455-545)
[»] scaffold0122 (2 HSPs)
scaffold0122 (38-104)||(8010-8075)
scaffold0122 (45-129)||(8641-8725)
[»] scaffold0103 (1 HSPs)
scaffold0103 (35-124)||(51791-51883)
[»] scaffold0697 (1 HSPs)
scaffold0697 (24-96)||(1652-1724)
[»] scaffold0306 (1 HSPs)
scaffold0306 (44-124)||(13380-13460)
[»] scaffold0152 (1 HSPs)
scaffold0152 (44-124)||(21867-21947)
[»] scaffold0027 (1 HSPs)
scaffold0027 (45-129)||(46657-46741)
[»] scaffold0361 (1 HSPs)
scaffold0361 (24-104)||(14530-14607)
[»] scaffold0246 (1 HSPs)
scaffold0246 (55-129)||(19551-19624)
[»] scaffold0011 (1 HSPs)
scaffold0011 (46-120)||(17750-17824)
[»] scaffold0171 (1 HSPs)
scaffold0171 (45-129)||(23395-23479)
[»] scaffold0083 (1 HSPs)
scaffold0083 (38-76)||(45523-45561)
[»] scaffold0049 (1 HSPs)
scaffold0049 (45-131)||(56895-56981)
[»] scaffold0722 (1 HSPs)
scaffold0722 (40-121)||(7027-7108)
[»] scaffold0021 (1 HSPs)
scaffold0021 (48-129)||(130457-130538)
[»] scaffold0008 (1 HSPs)
scaffold0008 (45-126)||(263372-263453)
[»] scaffold0450 (1 HSPs)
scaffold0450 (45-117)||(8635-8707)


Alignment Details
Target: chr2 (Bit Score: 432; Significance: 0; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 60 - 515
Target Start/End: Original strand, 12940950 - 12941405
Alignment:
Q  60 taattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtctatatccgtgttttataacctaaaaataaa 159  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12940950 taattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtctgtatccgtgttttataacctaaaaataaa 12941049  T
Q  160 cataagataagataatgaagatggaagaaaaacaaactcttacctataacatcaacaacggttcttccattacaaaaacgacctgtgggttttccaaaat 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941050 cataagataagataatgaagatggaagaaaaacaaactcttacctataacatcaacaacggttcttccattacaaaaacgacctgtgggttttccaaaat 12941149  T
Q  260 caattccataagggtgatgatttgctttggcaagtgaagtgatgtaattgttgttccctacatcgagcaaagaatcaccaaaaacaaatgaagcttgaat 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941150 caattccataagggtgatgatttgctttggcaagtgaagtgatgtaattgttgttccctacatcgagcaaagaatcaccaaaaacaaatgaagcttgaat 12941249  T
Q  360 tttatatgatatgctaaatttgaaagagagcaataatgtaaaaatcctaaacatattctcaaaaatgagttttgtgctcaaataataaagacccattgga 459  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12941250 tttatatgatatgctaaatttgaaagagagcaataatgtaaaaatcctaaacatattctcaaaaatgagttttgtgctcaaataataaagactcattgga 12941349  T
Q  460 gagaaattttatgctaaaaaataggttcctcttgttttgtttggtttctctgctcc 515  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12941350 gagaaattttatgctaaaaaataggttgctcttgttttgtttggtttctctgctcc 12941405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 18840986 - 18841097
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||| |||||||| |||| ||||||| |||||||| |||| |||||||||| |||||| | |  ||||||||||||||||| ||||| |||||||||||    
T  18840986 gtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgt 18841085  T
Q  118 ccgtgtcgtgtc 129  Q
    || |||||||||    
T  18841086 ccatgtcgtgtc 18841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 20539674 - 20539758
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| |||||||||| ||||||||||  ||||||||||||||| | |||| ||||||||||||||||||||||||    
T  20539674 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtc 20539758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 19536391 - 19536482
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacatttt-caaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||||||| |||| ||||||||||||||||| |||  |||| ||||||||||||| ||||  ||||||| |||||||||||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtc 19536482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 30404829 - 30404944
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    |||||||| |||| ||||||||||| |||| |||| ||||||||||||||||| |||  ||||||||||||||    ||||  |||||||||||||||||    
T  30404829 gtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgt 30404928  T
Q  124 cgtgtctatatccgtg 139  Q
    | ||||  ||||||||    
T  30404929 catgtccgtatccgtg 30404944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 2438692 - 2438795
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||| |||||||| |||| |||||||||||||||| |||| ||||||||||||||||| |||  |||| |||||||||| | |||||  | ||||||||    
T  2438692 gtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtca--gcgtcagtgt 2438789  T
Q  118 ccgtgt 123  Q
    ||||||    
T  2438790 ccgtgt 2438795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 18422027 - 18421941
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    |||| ||||||||| |||| ||||||||||||||||| ||| ||||| ||||||||| || ||||  ||||||||||||||||||||    
T  18422027 gtgttcgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgt 18421941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 36756344 - 36756425
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    ||||||||| |||||||||||||||||||||| | |  | ||||||||||||||| |||| ||||||||||||| |||||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgt 36756425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 15972939 - 15972851
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    |||||||||||||||| |||| ||||||||||||||| | | |  |||||||||||||| || ||||  ||||||||||||||||||||    
T  15972939 tcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgt 15972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 20473387 - 20473296
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||||||||| ||| |||| |||||||||||||||||||||  |||| |||||||||||| ||||  | |||||||||| |||||| ||||    
T  20473387 cgtgtccgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtctgtgtcgagtct 20473296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 12668423 - 12668493
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagt 115  Q
    ||||||||| |||||||||||||||||||||| | |  ||||||||||||||||||||||  |||||||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagt 12668493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 5367270 - 5367198
Alignment:
Q  26 gtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagt 98  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||||| |||  |  |||||||||||||    
T  5367270 gtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattagt 5367198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 29176472 - 29176544
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    |||||||| ||||  ||||||| ||||| | |||||||||||||||||||||| |||| ||||||||||||||    
T  29176472 gtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgtgaccttttcaaattatta 29176544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 20242722 - 20242812
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    |||||||||||||| || ||||||||||||||||||| |||  || | |||  ||||||| ||||  ||||||||||||| ||||||||||    
T  20242722 gtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtccatgtcgtgtct 20242812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 34691799 - 34691857
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||||||||| || |||||||||||||||||||||||  || ||||||||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattag 34691857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 34714211 - 34714269
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||||||||| || |||||||||||||||||||||||  || ||||||||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattag 34714269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 124
Target Start/End: Complemental strand, 37559039 - 37558957
Alignment:
Q  42 gtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    |||||||||||| |||| |||||||| |||||||| |||  ||| ||||||||||| | ||||  ||||||||||||||||||    
T  37559039 gtccgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 6940321 - 6940233
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    ||||||| || ||||| |||| |||||||||| |||||| | || |||| |||||||||| | ||||  ||||||||||||||||||||    
T  6940321 tcgtgtcggataccgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgt 6940233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 15657923 - 15657839
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| | || ||||||||||||||||| |||  ||| |||||||||||||  |||  ||||| |||||||||||||||||    
T  15657923 cgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtc 15657839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 23718087 - 23718001
Alignment:
Q  43 tccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||| |||||| || ||||||||||||||||||| |||| || ||||||||||||   ||||   ||||||||||||||||| ||||    
T  23718087 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtc 23718001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 24105759 - 24105673
Alignment:
Q  43 tccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||| |||||| || ||||||||||||||||||| |||| || ||||||||||||   ||||   ||||||||||||||||| ||||    
T  24105759 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtc 24105673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 14996224 - 14996309
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacatttt-caaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    |||||||| |||| |||||||||| ||||||||||  |||| ||||||||||| | ||||  | |||||||||||||||| |||||    
T  14996224 gacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgtct 14996309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 30335476 - 30335391
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||||||| | || |||||||||| |||||| | |  ||||||||||||||||| ||||  ||||  ||||||||||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtct 30335391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 11223864 - 11223948
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    |||||||| |||| ||||||||||||||||| | |  |||||||| |||||| | ||||| |||||| |||||| |||| |||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtcagcgtgtctgtgtccatgtcatgtct 11223948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 28596549 - 28596497
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattat 76  Q
    |||||||| | || |||||||||||||||| ||||||||||||||||| ||||    
T  28596549 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttat 28596497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 30717530 - 30717610
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcg 125  Q
    ||||| ||| |||| ||||||||||||||||| |||  ||||||||||||||| | ||||    |||||||||||||||||    
T  30717530 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtgtcg 30717610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 38117132 - 38117232
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||| |||||||| | || | |||||||||||| | |||| ||||||||| ||| ||| |||  ||||||||||||||| | ||||  |||||||||||    
T  38117132 gtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 38117231  T
Q  118 c 118  Q
    |    
T  38117232 c 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 974806 - 974747
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtc 104  Q
    ||||||||| |||| |||||||||||||| || |||  ||||||||||||||||| ||||    
T  974806 cgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtc 974747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 21616808 - 21616737
Alignment:
Q  58 tataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||||||||||| |||  || ||||||||||||   ||||  |||||| ||||||||||||||||    
T  21616808 tataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 12224309 - 12224251
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattat 76  Q
    ||||| |||||||| | ||||||||||||||||||| |||| |||||||| || |||||    
T  12224309 gtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattacattggattat 12224251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 21624332 - 21624242
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattat-atgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgt 128  Q
    ||||||||||||||| |||| |||||||||||||||||  |    |||| |||||||||| | ||||  |||||||||||| |||||||||    
T  21624332 cgtgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgt 21624242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 16069268 - 16069333
Alignment:
Q  59 ataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    ||||||||||||||||||||||  |||| |||||||||    ||||  ||||||||||||||||||    
T  16069268 ataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 21374709 - 21374778
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    |||| ||||||||||||||||| | |  ||||||||||||||| | ||||  ||||| ||||||||||||    
T  21374709 acttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc 21374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 23058442 - 23058527
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacatttt-caaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| ||||||||||| ||||| |||  |||| |||||||||| || |||   ||||||| |||||||||||||||    
T  23058442 cgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtcgtgtc 23058527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 28677968 - 28677916
Alignment:
Q  44 ccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||||| || ||||||||||||||||||| |||  |||||||||||||||    
T  28677968 ccgacaccga-acatataattacactgaattatgtgattttttcaaattattag 28677916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 29664057 - 29663984
Alignment:
Q  57 ttataattacactgaattatatg-acattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||||||||||||||  |  |||||||||||||||   |||| || |||||||||| ||||||||||    
T  29664057 ttataattacactgaattatatatattttttcaaattattagcactgtcgacatgtcagtgtctgtgtcgtgtc 29663984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 34784982 - 34785067
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||||||| || |||||||||||| |||||| |||  || | |||  ||||||| ||||   |||||||||||||||||||||||    
T  34784982 cgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtct 34785067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 18571052 - 18570980
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    |||||||||||||||||||| |||||| || || ||| |||||| |||||||| | |  || |||||||||||    
T  18571052 gtgtcggatatgtatcgtgttcgacactgacacatatgattacattgaattatgtcattttctcaaattatta 18570980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 23921317 - 23921261
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    |||||||||||| ||| |||||||||||||||||||| | |  || |||||||||||    
T  23921317 gtgtccgacaccaatatttataattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 24894438 - 24894370
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    |||| ||||| ||||||||||| |||  |||| |||||||||| | ||||  |||||||||||||||||    
T  24894438 acttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 26492184 - 26492289
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    ||||| || |||| ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||| | ||||  |||||||||||||||||    
T  26492184 gtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgt 26492283  T
Q  124 cgtgtc 129  Q
    ||||||    
T  26492284 cgtgtc 26492289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 14216951 - 14216866
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    |||||| || |||| ||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  14216951 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtct 14216866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 14223080 - 14222995
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    |||||| || |||| ||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  14223080 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtct 14222995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 8383322 - 8383232
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||||||| ||||||||||||||||||||||||||  || ||||||||||||   ||||  ||||||| |||||||||||||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtc 8383232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 10955038 - 10954932
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||| |||||||| | || |||||||||||||||| |||| | ||||||||||||||| |||  ||||||||||||||||| ||||  |||||||||||    
T  10955038 gtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 10954939  T
Q  118 ccgtgtc 124  Q
     ||||||    
T  10954938 tcgtgtc 10954932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 28918089 - 28917976
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtcc--gacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagt 115  Q
    ||||| |||||||| | || ||||||||  |||||||| |||| ||||||||||||||||| |||  ||||||||||||||| ||||||  |||||||||    
T  28918089 gtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagt 28917990  T
Q  116 gtccgtgtcgtgtc 129  Q
     |||||||||||||    
T  28917989 ttccgtgtcgtgtc 28917976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 55401155 - 55401053
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    |||||||| | || |||||||||||||||| |||| |||||||||| |||||| |||  ||||||||||||||||| ||||  ||| |||||||||||||    
T  55401155 gtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgt 55401056  T
Q  124 cgt 126  Q
    |||    
T  55401055 cgt 55401053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 10335279 - 10335370
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||| |||||||||| |||| || ||||||| || ||| |||| ||||||||||||||||| ||||  |||||||||||||||||||||||    
T  10335279 tcgtgcccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 10335370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 16000010 - 16000099
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgt 128  Q
    ||||||||||||||| |||| || |||||||||||||| | |  |||| |||||||||||| ||||  |||||||||||| |||||||||    
T  16000010 cgtgtccgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 16000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 8587017 - 8587105
Alignment:
Q  41 tgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||||| |||| |||||||||| |||||| |||  ||||||||||| ||| | ||||  |||||||||||||||||| ||||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtc 8587105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 15796294 - 15796378
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| | || |||||||||||||||||||||  ||||||||||||||  | ||||  ||||||| |||||||||||||||    
T  15796294 cgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtc 15796378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 20503551 - 20503451
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||| ||||| || |||| |||||||| ||||||| |||| ||||||||||||||||| | |  ||||||||||||| ||| ||||  |||||||||||    
T  20503551 gtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgt 20503452  T
Q  118 c 118  Q
    |    
T  20503451 c 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 41961650 - 41961734
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| ||||||||| |||| || ||| |||||||||||||||||| || |  |||||||||||| ||||||||||    
T  41961650 cgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtc 41961734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 29112293 - 29112356
Alignment:
Q  58 tataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgt 121  Q
    |||||||||||||||||||||||  || |||||| ||||||  |||||||||||||||||||||    
T  29112293 tataattacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtgtccgt 29112356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 7928515 - 7928457
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||||||||| || ||||||||||||||||||| |||  |||||||||||||||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattag 7928457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 26508166 - 26508076
Alignment:
Q  48 caccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtctatatccgt 138  Q
    |||||| |||| ||||||||||||||||| |||  ||||||||||||||| | ||||| ||||||||| || || |||||||  |||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccgtatccgt 26508076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 40993308 - 40993366
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattat 76  Q
    ||||| |||||||| |||| |||||||||||||||| || |||||||||||||||||||    
T  40993308 gtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattat 40993366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 750618 - 750703
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtc-agtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| ||||| ||  ||||||| ||| |||||||||||||||||| ||||  |||||| |||||||||||||||||    
T  750618 cgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtc 750703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 23657802 - 23657757
Alignment:
Q  41 tgtccgacaccgatacttataattacactgaattatatgacatttt 86  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||    
T  23657802 tgtccgacaccgatatttataattacactgaattatatgatatttt 23657757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 17005621 - 17005672
Alignment:
Q  47 acaccgatacttataattacactgaattatatgacattttcaaattattagt 98  Q
    ||||||| ||||||||||||||||||||||||||  || |||||||||||||    
T  17005621 acaccgacacttataattacactgaattatatgattttatcaaattattagt 17005672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 35312108 - 35312029
Alignment:
Q  50 ccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||| |||| ||||||||||||||||| | ||||||| |||||||||  | |||| || | |||||||||||||||||||    
T  35312108 ccgacacttgtaattacactgaattatgtaacatttttaaattattaaatgtgtcgacatatcagtgtccgtgtcgtgtc 35312029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 3164043 - 3164109
Alignment:
Q  63 ttacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||||||| |||  ||||||||||||||| | |||| ||||| || |||||||||||||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtc 3164109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 10318028 - 10318113
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    ||||| |||||||||| ||||||| ||||||| ||  || |||| ||||||||||||||| | ||||  ||||||||||||||||||    
T  10318028 tcgtgcccgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 10318113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 22774071 - 22774149
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    |||||||| |||||||||||||||||| ||| |||| || || ||||||||||  |||| ||||||| ||||| |||||    
T  22774071 gacaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgtcgacgtgtctgtgtctgtgtc 22774149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 25775574 - 25775516
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatga-cattttcaaattatta 96  Q
    ||||||||||||||| |||| ||||||||||||||||| |||  |||||||||||||||    
T  25775574 cgtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattatta 25775516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 124
Target Start/End: Complemental strand, 33359823 - 33359741
Alignment:
Q  42 gtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    ||||||||| || |||| || ||||||| || ||| |||| ||||||||||||||| | ||||| |||||||||||| |||||    
T  33359823 gtccgacactgacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtcagcgtgtcagtgtctgtgtc 33359741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 51206348 - 51206427
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgt 121  Q
    |||||||||||||| |||| || |||||||||||||| |||  ||||||||||||||| | |||||  ||||| ||||||||    
T  51206348 gtgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtca--gtgtccgtgtccgt 51206427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 7171581 - 7171477
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    |||||||| | || |||||||||||||| | |||| ||||||||| |||||||||||  |||||||||||  || | ||||  | ||||||| |||||||    
T  7171581 gtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatga-tttttcaaattacaagctgtgtcggcatgtcagtatccgtgt 7171483  T
Q  124 cgtgtc 129  Q
    ||||||    
T  7171482 cgtgtc 7171477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 25948887 - 25948939
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||| | |||||||||||||||||||||| |||  |||||||||||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattag 25948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 29508490 - 29508450
Alignment:
Q  58 tataattacactgaattatatgacattttcaaattattagt 98  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  29508490 tataattacactgaattatatgattttttcaaattattagt 29508450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 11493374 - 11493441
Alignment:
Q  58 tataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcg 125  Q
    ||||||||||||||||||| |||  || ||| |||||||||  |||| |||||||| |||||||||||    
T  11493374 tataattacactgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgtccgtgtcg 11493441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 15505785 - 15505876
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatga-cattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    |||||||||||| | |||||||||||||||||||||||| |   |||| ||||||||| || | |||||||||| || ||  ||||||||||    
T  15505785 gtgtccgacaccaacacttataattacactgaattatataattttttttaaattattaattgtatcaacgtgtctgtatctatgtcgtgtct 15505876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 16789071 - 16789020
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    ||||||| | ||||||||||||||||||||||||||  |||| |||||||||    
T  16789071 cgacaccaacacttataattacactgaattatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 23870572 - 23870635
Alignment:
Q  58 tataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgt 121  Q
    |||||| ||||||||||||||||  |||||||||||||||   |||| ||||||| ||||||||    
T  23870572 tataatcacactgaattatatgattttttcaaattattagcggtgtcgacgtgtccgtgtccgt 23870635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 34910376 - 34910317
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtc 104  Q
    |||||||||  ||| ||||||||||||||||| |||  ||||||||||||||||| ||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtc 34910317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 4987301 - 4987363
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    |||| ||||||||||||||||| |||  ||||||||||||||| | ||||  |||||||||||    
T  4987301 acttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 10268481 - 10268567
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    ||||| ||||| || |||| |||||||||| |||||| |||  ||||||||||||||  | ||||  ||||||||||||| ||||||    
T  10268481 gtgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgt 10268567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 14979224 - 14979146
Alignment:
Q  61 aattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtctatatccgtg 139  Q
    |||||||||||||||| |||  ||||||||||||||| | ||||  |||| || ||||| |||||||||  ||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtccgtatccgtg 14979146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 21479178 - 21479104
Alignment:
Q  44 ccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    |||||||||| |||  ||||||||||||||| | |||  ||||||||||||||| | ||||  ||||||||||||    
T  21479178 ccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 25093582 - 25093532
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaatt 74  Q
    |||||||| |||| | |||||||||||||| || |||||||||||||||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaatt 25093532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 35994733 - 35994821
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||||| || |||| ||||||||||||||||| |||  ||||||||||||||| | ||||  | ||||| ||||| |||||||||    
T  35994733 cgtgtccgacac-gacacttgtaattacactgaattatgtgat-ttttcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtc 35994821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 24205037 - 24205125
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||| || |||||||||||||||| ||||| | |  || |||||||||||    ||||  |||||||||||||||||||||||    
T  24205037 gtgtccgacac-gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtc 24205125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 45451633 - 45451560
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||| |||| |||||||||||||||| || ||| |||| |||||| ||| |||  || ||||||||||||    
T  45451633 gtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattag 45451560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 1509598 - 1509546
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||| |||| |||||||||| |||||| |||  |||||||||||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 1509546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 3631764 - 3631712
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattat 76  Q
    |||||||| |||| ||||||||||||| |  || |||||||||||||||||||    
T  3631764 gtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattat 3631712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 8039835 - 8039887
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||| || ||||||||||||||||||||| |  || ||||||||||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttctcaaattattag 8039887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 8789543 - 8789599
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattat 94  Q
    |||||||||||||||| || ||||||||||| ||||||| |||  || |||||||||    
T  8789543 tcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 9800099 - 9800015
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| ||||| |||||||| ||||||| | |  || ||||||||||||   ||||  ||||||||||| |||||||||||    
T  9800099 cgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtc 9800015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 14829748 - 14829665
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| |||||||  |||||||| |||  ||||||||||||||| | ||||  |||||||||||| ||||| ||||    
T  14829748 cgacaccgacacttgtaattaccatgaattatgtgat-ttttcaaattattagctgtgtcggcgtgtcagtgtctgtgtcatgtc 14829665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 21256990 - 21257058
Alignment:
Q  49 accgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||| |||| |||||| |||||||||| |||  ||||||||||||||| | ||||| |||||| ||||    
T  21256990 accgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcatcgtgtcggtgt 21257058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 28812574 - 28812499
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgt 121  Q
    ||||||||| |||| ||| ||||||||||||| |||  | ||||||||||||||| ||||  |||||| ||||||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtc-gtgtccgt 28812499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 49651786 - 49651838
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||| |||| |||||||| |||||||| |||  |||||||||||||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattag 49651838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 4e-24; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 12797311 - 12797431
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||| ||||| || ||||||||||||||||||||| |||| ||||||||||||||||| |||  ||||||||||||||||| || |  |||||||||||    
T  12797311 gtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagttttgccggcgtgtcagtgt 12797409  T
Q  118 ccgtgtcgtgtctatatccgtg 139  Q
    ||||||||| ||  ||||||||    
T  12797410 ccgtgtcgtatccgtatccgtg 12797431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 28964221 - 28964309
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaa 106  Q
    ||||| ||||||||||||| ||||||||||||| || |||| ||||||||||||||||| |||  ||||||||||||||| ||||||||    
T  28964221 gtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcaa 28964309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 23292959 - 23293070
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||| |||||||| | || |||||||||||||||| |||| |||||| |||||||||| |||  ||||||||||||||| | ||||  ||||||| |||    
T  23292959 gtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgt 23293058  T
Q  118 ccgtgtcgtgtc 129  Q
    ||||||||||||    
T  23293059 ccgtgtcgtgtc 23293070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 40179615 - 40179715
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    |||||| | |||| ||||||||||||||||  | ||||||||||||||||||| |||  |||||||| ||||| |  |||||||||||||||||||||||    
T  40179615 gtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgt 40179714  T
Q  124 c 124  Q
    |    
T  40179715 c 40179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 54580016 - 54580118
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtctatatccg 137  Q
    |||||||||||||||| |||||||||||||||||||||| |||  ||||||||||||||||| |||||  | ||| |||||||    |||||| ||||||    
T  54580016 tcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtca--gcgtccgtgtccg----gtgtctgtatccg 54580109  T
Q  138 tgttttata 146  Q
    |||||||||    
T  54580110 tgttttata 54580118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 19482727 - 19482642
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||||| | |||| ||||||||| ||||||| ||| |||||||||||||||||| ||||  |||||||||||| |||||||||||    
T  19482727 cgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtct 19482642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 35157964 - 35158069
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    |||| ||| |||| ||||||| |||||||| ||||||||||||||| |||||| |||  ||| |||||||||||||  |||  |||||||||||||||||    
T  35157964 gtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgt 35158063  T
Q  124 cgtgtc 129  Q
     |||||    
T  35158064 tgtgtc 35158069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 29205530 - 29205451
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||| |||||||| |||| |||||||| ||||||| |||| ||||||||||||||||| |||  |||||||||||||||    
T  29205530 gtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 7377451 - 7377374
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatga--cattttcaaattattagtt 99  Q
    |||||| |||||||||||||| |||||||||| ||||||||||||| ||||||||||    |||||||||||||||||    
T  7377451 gtgtcgaatatgtatcgtgtcggacaccgatatttataattacactaaattatatgagttcttttcaaattattagtt 7377374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 12895254 - 12895355
Alignment:
Q  25 tgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    |||||||||  | |||||||||||||||| ||||||||||||||  |||||| |||  |||||||||||||| || ||||  ||||||| ||| ||||||    
T  12895254 tgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtc 12895353  T
Q  125 gt 126  Q
    ||    
T  12895354 gt 12895355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 21945583 - 21945478
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    |||||||| |||| || ||||||||||||| |||| ||||||||||||||||| | |  ||||||||||||||| | ||||  | |||||||||| ||||    
T  21945583 gtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgt 21945484  T
Q  124 cgtgtc 129  Q
    | ||||    
T  21945483 catgtc 21945478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 16073474 - 16073422
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattat 76  Q
    |||||||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  16073474 gtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattat 16073422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 49431092 - 49431000
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatga-cattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||||||||| |||| ||||||||||||||||| |||   ||||||||||||||| | ||||  ||||||| |||||| ||||||||    
T  49431092 tcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtc 49431000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 4157229 - 4157149
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtca 105  Q
    |||||||| |||| |||||||||||||||| |||| ||||| |||| |||||| |||  ||||||||||||||||| |||||    
T  4157229 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtga-tttttcaaattattagttgtgtca 4157149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 30838269 - 30838184
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||||||||||||||||||||||| |||||||| |  || ||||||||||||   | || |||| |||||||||||| |||||||    
T  30838269 cgacaccgatacttataattacactaaattatataattttatcaaattattagcagtatcgacgtatcagtgtccgtgccgtgtct 30838184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 8423711 - 8423770
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||||||||||| | |||||||||||||||||||| |||  || ||||||||||||    
T  8423711 tcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattag 8423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 27706187 - 27706262
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    |||| |||||||||| |||||| |||  |||| ||||||||| || |||| |||||||||||||| ||||||||||    
T  27706187 acttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtct 27706262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 15029825 - 15029751
Alignment:
Q  44 ccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    |||||||| | || ||||||||||||||||||| ||| ||||||||||||||||   ||||  ||||||||||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc 15029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 34306783 - 34306876
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    |||||||| | || |||||||||||||||| |||| ||||||||||  ||||| |||  ||||||||||||||||| ||||  ||| ||||||||    
T  34306783 gtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtgtcggcgtatcagtgtc 34306876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 40481685 - 40481612
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||| ||||||||||||||||| |||  ||||||||||||||||| | ||  |||||||||||| ||||||||||    
T  40481685 acttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtc 40481612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 4383411 - 4383351
Alignment:
Q  60 taattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgt 121  Q
    ||||||||||||||||| |||  ||||||||||||||||| | || ||||||||||||||||    
T  4383411 taattacactgaattatgtgat-ttttcaaattattagttgtatcgacgtgtcagtgtccgt 4383351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 38846991 - 38847064
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||| | || |||| |||||||| || |||| |||||||||||||| ||||||  |||||||||||||||    
T  38846991 gtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgattttttcaaattattag 38847064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 11651155 - 11651219
Alignment:
Q  66 cactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||||||||| |||  |||| |||||||||| | |||| |||||||||||||||| ||||||||    
T  11651155 cactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtct 11651219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 16303266 - 16303350
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| |||||||||| |||||||| |  |||||||| |||||  | ||||  ||||||||||||||| |||||||    
T  16303266 cgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtatcgtgtc 16303350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 22440613 - 22440697
Alignment:
Q  58 tataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtctatatccgtgttt 142  Q
    ||||||||||||||||||| |||  || |||||||||||    |||| | || ||||||||| |||||||||| |||||||||||    
T  22440613 tataattacactgaattatgtgattttctcaaattattaacggtgtcgatgtatcagtgtccatgtcgtgtctgtatccgtgttt 22440697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 30299006 - 30298926
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatga-cattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    ||||||||| |||| ||||||||||||||||| | |   ||||||||||||||| | ||||  ||||||||||||||||||    
T  30299006 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 30327874 - 30327794
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatga-cattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    ||||||||| |||| ||||||||||||||||| | |   ||||||||||||||| | ||||  ||||||||||||||||||    
T  30327874 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 35161116 - 35161064
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattat 76  Q
    |||||||| | || ||||||||||| | |||||||||||||||||||||||||    
T  35161116 gtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattat 35161064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 2361968 - 2362027
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||||||||||| |||| |||||||||| |||||| | |  |||||||||||||||    
T  2361968 tcgtgtccgacaccgacacttttaattacactaaattatgtaattttttcaaattattag 2362027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 8402718 - 8402777
Alignment:
Q  21 cctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatga 80  Q
    ||||||||||| | || ||||||| ||||| || || |||||||||||||||||||||||    
T  8402718 cctgtgtcggacaagtgtcgtgtctgacactgagacatataattacactgaattatatga 8402777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 36635370 - 36635299
Alignment:
Q  58 tataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||||||||||| |||  || |||||||||||||  |||   |||||||||||||| ||||||||    
T  36635370 tataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtc 36635299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 6863211 - 6863161
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    ||||||||||| ||||||| ||| |||||||||||  ||||||||||||||    
T  6863211 gacaccgatacatataattgcaccgaattatatgattttttcaaattatta 6863161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 14126121 - 14126195
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||||||||||||||| |||| || |||||||||||    ||||  ||||| |||||| ||||||||||    
T  14126121 acttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtc 14126195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 482232 - 482269
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattat 76  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  482232 cgtgtccgacaccgacagttataattacactgaattat 482269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 6485613 - 6485690
Alignment:
Q  47 acaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    ||||||| |||| |||||||||| |||||| |||  |||||||||||||| || ||||  |||||  |||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaattttgtctgcgtgtaggtgtccgtgtc 6485690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 20950415 - 20950456
Alignment:
Q  33 atgtatcgtgtccgacaccgatacttataattacactgaatt 74  Q
    |||||||||||| |||||||| || |||||||||||||||||    
T  20950415 atgtatcgtgtctgacaccgacacatataattacactgaatt 20950456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 42640594 - 42640557
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattat 76  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  42640594 cgtgtccgacaccgacacttgtaattacactgaattat 42640557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 4157516 - 4157464
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattat 76  Q
    |||||||| |||| |||||||||||||||| |||| ||||| |||| ||||||    
T  4157516 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattat 4157464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 11596352 - 11596404
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||| | |||| ||||||||||||||||| |||  |||||||||||||||    
T  11596352 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattag 11596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 73
Target Start/End: Complemental strand, 19312394 - 19312366
Alignment:
Q  45 cgacaccgatacttataattacactgaat 73  Q
    |||||||||||||||||||||||||||||    
T  19312394 cgacaccgatacttataattacactgaat 19312366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 35952617 - 35952669
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||| ||||| |||||||||| ||||||||||||  || ||||||||||||    
T  35952617 cgacactgatacatataattacattgaattatatgattttatcaaattattag 35952669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 6e-23; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 3398677 - 3398595
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgt 128  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||| | ||||  ||||||||||||||||||||||    
T  3398677 cgacaccgatacttataattacactgaattatatga-tttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 3398595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 34595200 - 34595109
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||||||||| |||| ||||||||||||||||| |||  ||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  34595200 tcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtc 34595109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 8365519 - 8365604
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||||||| |||| ||||||||| ||||||| ||| |||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtct 8365604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 8776966 - 8777057
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||||||| | |||| ||||||||||||||| | |||  ||||||||||||||||| ||||  |||||||||||||||||||||||    
T  8776966 tcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 8777057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 28152184 - 28152079
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||| |||||||| | || |||||||||||||||| |||| ||||||||||||||||| |||  ||||||||||||||| | ||||  |||||||||||    
T  28152184 gtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagctttgtcggcgtgtcagtgt 28152086  T
Q  118 ccgtgtc 124  Q
    |||||||    
T  28152085 ccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 7938180 - 7938091
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||| |||||||| ||||||||||||||| ||||||||||  ||||||||||||||| | ||||  ||||||||||||| |||||||||    
T  7938180 gtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtc 7938091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 10770674 - 10770768
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtctatatccgtg 139  Q
    ||||||||| |||| ||||||||||||||||| |||  ||||||||||||||||| |||   ||||||||||||| |||||||||  ||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccgtatccgtg 10770768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 16766756 - 16766672
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| ||||||||||||||||| |||  ||||||||||||||| | ||||  ||||||||||||| |||||||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtc 16766672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 16833374 - 16833283
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||  ||||||| |||| ||||||||||||| ||| |||  ||||||||||||||||| ||||  |||||||||||| ||||||||||    
T  16833374 tcgtgtctaacaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtc 16833283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 426508 - 426598
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||||||| |||| |||||||| | |||||| |||  ||||||||||||||  | ||||  |||||||||||||||||||||||    
T  426508 cgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtc 426598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 17841582 - 17841668
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    |||||||||||||||  |||| |||||||||| |||||| |||  ||||||||||||||| | ||||  ||||||||||||||||||    
T  17841582 tcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 7265572 - 7265645
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||| |||||| |||||||||||||| || ||||||||||||||||||| |||  || ||||||||||||    
T  7265572 gtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattag 7265645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 7977825 - 7977914
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||||||| |||| ||||||||||||||||| | |  ||||||||||||||| | ||||  ||||||||| ||| |||||||||    
T  7977825 gtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtc 7977914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 4878026 - 4877918
Alignment:
Q  21 cctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgac-attttcaaattattagttatgtcaacgtgtcagtgtcc 119  Q
    ||||||||||| |||| |||||||||||||||| |||| |||||| ||| |||||| ||||  ||||||||||||||| | ||||   |||||| | |||    
T  4878026 cctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgtcactatcc 4877927  T
Q  120 gtgtcgtgt 128  Q
    |||||||||    
T  4877926 gtgtcgtgt 4877918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 9107370 - 9107454
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| ||||||||||||||| | |||  ||||||||||||||| | ||||  ||||| |||||||||||||||||    
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtc 9107454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 12696383 - 12696299
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||| || |||| ||||||||||||||||| | |  ||||||||||||||| | ||||  |||||||||||||||||||||||    
T  12696383 cgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 12696299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 853852 - 853943
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||| ||||||||||| |||| ||||| |||| |||||| |||  ||||||||||||||||| ||||  ||||||||  |||||||||||||    
T  853852 tcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtc 853943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 21924930 - 21924987
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||||||||| || ||||||||||||||||||| ||| ||| ||||||||||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattag 21924987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 19044522 - 19044442
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    |||||||| || |||||| |||||||||||| ||| ||| |||||||||||||  ||||  ||||||||||||| ||||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcgt 19044442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 6898274 - 6898365
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||||||||| |||| |||||||||| |||||| | |  | |||||||||||||   ||||| ||||||||||||| | |||||||    
T  6898274 tcgtgtccgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagtgtccatatcgtgtc 6898365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 15489733 - 15489816
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||| |||| |||||||| |||||| | | |  ||||||||||||||||| |||| |||||| ||||||||||| |||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtc 15489816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 17435248 - 17435177
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    |||| ||||||||||||||||| | |  |||| |||||||||| |||||| |||| ||||||||||||||||    
T  17435248 acttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtgtcgt 17435177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 28715361 - 28715302
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||||||||||| |||| ||||||||||||||||| | |  |||||||||||||||    
T  28715361 tcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattag 28715302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 13364684 - 13364754
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattat 94  Q
    ||||| || ||||||||||||| ||||||| || ||| |||||||||||||||||||  || |||||||||    
T  13364684 gtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgattttctcaaattat 13364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 32978872 - 32978930
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattat 76  Q
    ||||| |||||||| |||| |||||||||||||||| |||| |||||||||| ||||||    
T  32978872 gtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattat 32978930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 7723250 - 7723323
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    |||||||||||| ||||||||  |||||||||||||  || ||||||||||||   |||| |||||||||||||    
T  7723250 cgacaccgatacatataattatgctgaattatatgattttctcaaattattagcagtgtccacgtgtcagtgtc 7723323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 7801155 - 7801228
Alignment:
Q  44 ccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    |||||||||| |||| ||||||| ||||||||| |||  ||||||||||||||||| ||||  ||||| |||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 7801228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 13360367 - 13360456
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||| |||||||| || ||||||||||||||||||| |||  || |||||||| ||||  |||| ||||||| |||| ||| |||||||    
T  13360367 gtgtctgacaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgtcgacgtgtctgtgttcgtatcgtgtc 13360456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 13851801 - 13851712
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgt 128  Q
    |||||| |||| ||| || ||||||||||||||||||  | |  || ||||||||||||   |||| |||||||||||||||||||||||    
T  13851801 cgtgtcagacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 9027237 - 9027153
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| || ||||||||||| ||||||| |||   | ||||||||||||   ||||  |||||||||||||||||||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9027153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 9658925 - 9658853
Alignment:
Q  58 tataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||||||||||||||||| |||  || | ||||||||||   ||||  ||||||||||||||||||||||||    
T  9658925 tataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtct 9658853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 19040423 - 19040359
Alignment:
Q  33 atgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||| ||||||||||||| || || ||||||||||||||||||| |||  || ||||||||||||    
T  19040423 atgtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattag 19040359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 23771644 - 23771541
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct-atatcc 136  Q
    |||||||||||||||| | || ||||||||||||| ||||| |  |||| |||||||||  | ||||  |||||| ||||||||||| ||||| ||||||    
T  23771644 tcgtgtccgacaccgacatttgtaattacactgaagtatat-aattttttaaattattaactgtgtcggcgtgtccgtgtccgtgtcatgtctaatatcc 23771546  T
Q  137 gtgtt 141  Q
    |||||    
T  23771545 gtgtt 23771541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 31384979 - 31384903
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgt 121  Q
    |||||| || |||| ||||||||||||||||| |||  ||||||||||||||||| | ||||| || |||| |||||    
T  31384979 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagttgtatcaacatgccagtatccgt 31384903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 6327516 - 6327603
Alignment:
Q  43 tccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||||| ||| |||| |||||||||| |||||||| |  ||||||||||||||  ||||||||  ||| ||||||  ||||||||||    
T  6327516 tccgacatcgacacttgtaattacacttaattatataattttttcaaattattaactatgtcaaaatgtaagtgtctttgtcgtgtct 6327603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 16388245 - 16388311
Alignment:
Q  57 ttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    |||||||||||||||||||| |||  ||||||||||||| | | | || |||||||||||||||||||    
T  16388245 ttataattacactgaattatgtgattttttcaaattatttgct-tatcgacgtgtcagtgtccgtgtc 16388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 26402668 - 26402711
Alignment:
Q  33 atgtatcgtgtccgacaccgatacttataattacactgaattat 76  Q
    ||||||||||||||||||||| |||| | |||||||||||||||    
T  26402668 atgtatcgtgtccgacaccgacacttgtgattacactgaattat 26402711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 33001282 - 33001341
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||||||||||| || |||||||||| | |||||| |||  |||||||||||||||    
T  33001282 tcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattag 33001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 1700416 - 1700362
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattat 94  Q
    |||||||||||||| |||||||||||||||||| ||| |||  |||| |||||||    
T  1700416 gtgtccgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 5732504 - 5732594
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||||||| || |||||||||||| || ||| |||  || |||||||||||    ||||  ||||||||||||| |||||||||    
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtc 5732594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 16388211 - 16388249
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattata 77  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  16388211 cgtgtccgacaccgacacttgtaattacactgaattata 16388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 17302606 - 17302536
Alignment:
Q  55 acttataattacactgaattatatgacatttt-caaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    |||| |||||||| |||||||| |||  |||| ||||||||||||| ||||| ||||||||||| ||||||    
T  17302606 acttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgttcgtgtc 17302536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 24138483 - 24138433
Alignment:
Q  47 acaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||||| ||||| |||||| ||||||||||  |||||||||||||||    
T  24138483 acaccgatacatataaatacacttaattatatgattttttcaaattattag 24138433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 403858 - 403915
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    ||||||||||||||| |||| || ||||||| |||||| |||  ||||||||||||||    
T  403858 cgtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 1681807 - 1681734
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgt 128  Q
    |||| ||||||||||||||||  |||  ||||||||||||||||| ||||  ||||| |||||  |||||||||    
T  1681807 acttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgt 1681734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 12627556 - 12627629
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||| |||| | |||||||||| ||| || ||| ||||||||||||||| |||  |||||| ||||||||    
T  12627556 gtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatgtgattttttcacattattag 12627629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 31563838 - 31563883
Alignment:
Q  83 ttttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgt 128  Q
    |||||||||||||| | |||||||| ||||||||| ||||||||||    
T  31563838 ttttcaaattattactgatgtcaacatgtcagtgtacgtgtcgtgt 31563883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 34197170 - 34197137
Alignment:
Q  45 cgacaccgatacttataattacactgaattatat 78  Q
    ||||||||| ||||||||||||||||||||||||    
T  34197170 cgacaccgacacttataattacactgaattatat 34197137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 7996378 - 7996430
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||||  | |||||||||||||||||||||||  || ||||||||||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattag 7996430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 8022423 - 8022371
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||||  | |||||||||||||||||||||||  || ||||||||||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattag 8022371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 9025494 - 9025546
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||| || ||||||||||||||||||| |||  || ||||||||||||    
T  9025494 cgacaccgacacatataattacactgaattatgtgattttctcaaattattag 9025546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 17341674 - 17341746
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtg 127  Q
    |||||||||||||||||||||| |||  || |||||||||||    ||||  |||||||||| ||||||||||    
T  17341674 acttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtcgtg 17341746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 31579215 - 31579276
Alignment:
Q  33 atgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    |||| |||||||||||||||| ||  |||||||||||||||||| |||  || |||||||||||    
T  31579215 atgtgtcgtgtccgacaccgacac--ataattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 34073347 - 34073431
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||  | |||||||||||||||||||  ||  || ||||||||||||  ||||   | |||||||||||||||||||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtc 34073431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 20873138 - 20873044
Alignment:
Q  35 gtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||||||||||| |||| |||||||||| |||||| |||  ||||||||||||||  ||||||  |||||||||||||||||||||||    
T  20873138 gtatcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtc 20873044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 36450747 - 36450833
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    |||||||||||||| | |||| ||||||||||||||| | |||  ||||||||||||||||| ||||  ||||||||||||||||||    
T  36450747 tcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 15816129 - 15816205
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgt 121  Q
    ||||||||| ||||||||||||||| |||||| |||  ||||||||||||||||| ||||  |||||||||||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 4948718 - 4948657
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagtt 99  Q
    |||||||||||||||| |||| ||||||||||||||||| |||  |||||||||||||||||    
T  4948718 tcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagtt 4948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 25192350 - 25192431
Alignment:
Q  48 caccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||| ||||||||||| |||||||||| | || ||||||||||||||| | ||||  ||||||||||||||| |||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtc 25192431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 2572056 - 2572140
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| |||||||||| |||||| |||  ||||||||||||||| | |||| ||||||| || |||||||||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtc 2572140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 22652035 - 22651951
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| |||||| | |||||||| |||  ||||||||||||||| | ||||  |||||||||||||||||||||||    
T  22652035 cgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 22651951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 138
Target Start/End: Complemental strand, 3677850 - 3677751
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct-atatccgt 138  Q
    |||||| |||||||||| ||||||||||  ||||||| |||  |||| ||||||||| || |||| | |||||||| |||||||||||||| ||||||||    
T  3677850 gtgtccaacaccgatacatataattacatagaattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgtgtcgtgtctgatatccgt 3677751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 4673426 - 4673509
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||| ||||||| ||||||||||||||| |||||  ||||||||||||||  | ||||  |||||||||||| ||||||||||    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtc 4673509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 5813678 - 5813575
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||| |||||||| | || |||||||||||||||| |||| || ||||||| || ||| |||| ||||||||||||||| | ||||  |||||| ||||    
T  5813678 gtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt 5813579  T
Q  118 ccgt 121  Q
    ||||    
T  5813578 ccgt 5813575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 29510306 - 29510388
Alignment:
Q  47 acaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||| |||| |||||| |||||||| | |||  ||||||||||||||| | ||||  |||||||||||||||||||||||    
T  29510306 acaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 29510388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 31557076 - 31556972
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    |||||||| |||| ||||||| |||||||| |||| ||||||||||||||||| |||  ||||||||||||||  | ||||  |||||||||| || |||    
T  31557076 gtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtga-tttttcaaattattaactgtgtcggcgtgtcagtgaccatgt 31556978  T
Q  124 cgtgtc 129  Q
    | ||||    
T  31556977 catgtc 31556972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 926761 - 926872
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||| |||||||| | || ||| |||||||||||| ||||||||||||||||||  ||  ||  || ||||||||||||   |||   |||||||||||    
T  926761 gtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgt 926860  T
Q  118 ccgtgtcgtgtc 129  Q
    ||||||||||||    
T  926861 ccgtgtcgtgtc 926872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 8343381 - 8343291
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||| |||||| || |||| |||||||||| |||||| |||  ||||||||||||||| ||||||   ||||| ||||| ||||||||||    
T  8343381 cgtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtc 8343291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 18170478 - 18170564
Alignment:
Q  41 tgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtg 127  Q
    ||||||||||||| | || |||||||| |||||||| | |  |||||||||| ||| || ||||  |||||||||||||||||||||    
T  18170478 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18170564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 18634046 - 18634132
Alignment:
Q  41 tgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtg 127  Q
    ||||||||||||| | || |||||||| |||||||| | |  |||||||||| ||| || ||||  |||||||||||||||||||||    
T  18634046 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18634132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 34897149 - 34897068
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgt 121  Q
    |||||||||| ||| || ||||||||||||||||||| |||  || ||||||||||||   |||| ||||||| ||||||||    
T  34897149 gtgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 25566900 - 25566848
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||| |||| ||||||||||||||||| |||  |||||||||||||||    
T  25566900 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 25566848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 41838144 - 41838208
Alignment:
Q  66 cactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||||||||| |||  |||| |||||||||| | |||| |||||||||||||||| ||||||||    
T  41838144 cactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtct 41838208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 3025617 - 3025558
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||||||| || || ||||||||||||||||||| |||  || ||||||||||||    
T  3025617 tcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattattag 3025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 8343031 - 8342972
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtc 104  Q
    ||||||||| |||| |||||||||| |||||| |||  ||||||||||||||| ||||||    
T  8343031 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtc 8342972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 14134745 - 14134679
Alignment:
Q  58 tataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    ||||||||||||||||||| |||  || |||||||||||||  |||| ||||||| ||||| |||||    
T  14134745 tataattacactgaattatgtgattttctcaaattattagtattgtcgacgtgtccgtgtcggtgtc 14134679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 24613585 - 24613528
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||||||||| |||| |||||||||| |||||| |||  |||||||||||||||    
T  24613585 cgtgtccgacaccgacacttgtaattacacttaattatgtga-tttttcaaattattag 24613528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 30077385 - 30077439
Alignment:
Q  43 tccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||| || |||| ||||||||||||||||| |||  |||||||||||||||    
T  30077385 tccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattag 30077439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 36934716 - 36934646
Alignment:
Q  58 tataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgt 128  Q
    |||||||||| |||||||| |||  ||||| |||||||||   |||| |||||| ||||||||||||||||    
T  36934716 tataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgt 36934646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 13844591 - 13844648
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||||||||| || |||||||||||| |||||| |||  || ||||||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattag 13844648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 18407799 - 18407726
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||| |||| ||||||||| || ||| |||| ||||||||||||||||| |||  ||||  |||||||||    
T  18407799 gtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttttttgaattattag 18407726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 40332257 - 40332200
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatt 95  Q
    |||||||| ||||||| |||| ||||||||||||||||| |||  || ||||||||||    
T  40332257 tcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 4786331 - 4786411
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    |||| ||||||||||| || ||||||||||||||||||| |||  || | ||||||||| |  ||||  ||||||||||||    
T  4786331 tcgtatccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 12606825 - 12606881
Alignment:
Q  41 tgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||| |||||||| || |||||||||| ||||||||||||  || ||||||||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttctcaaattattag 12606881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 13436964 - 13437048
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| | |||||  |||||||| |||  ||||||||||||||| | ||||  ||||||||||||| |||| ||||    
T  13436964 cgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtc 13437048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 20679396 - 20679468
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    |||||||| |||||||||||||||||| ||| |||  || ||||||||||||   |||| || ||||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtc 20679468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 31236569 - 31236629
Alignment:
Q  37 atcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    |||||||||| |||||| || |||||||||| |||||||| |||  || ||||||||||||    
T  31236569 atcgtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattag 31236629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 33405363 - 33405435
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    ||||| || |||| |||||||||||||||| || |||||||||||| |||||| ||   || |||||||||||    
T  33405363 gtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 41831915 - 41831991
Alignment:
Q  25 tgtcggatatgtatcgtgtccgacacc-----gatacttataattacactgaattatatgacattttcaaattatta 96  Q
    ||||||||| |||||||||||||||||     || |||| || |||||||||||||| |||  ||||||||||||||    
T  41831915 tgtcggatacgtatcgtgtccgacaccaacacgacacttgtagttacactgaattatgtgattttttcaaattatta 41831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 8878 - 8773
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    |||||||| | || |||||||||||||||| |||| |||||||||| ||| ||||||  ||||||||||||||| | ||||  |||||||||||||||||    
T  8878 gtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 8779  T
Q  124 cgtgtc 129  Q
    ||||||    
T  8778 cgtgtc 8773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 46348362 - 46348462
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    |||||||| | || |||||||||||||||| |||| |||||||||| ||||||||||  ||||||||||||||| | ||||  |||||||||||||||||    
T  46348362 gtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 46348461  T
Q  124 c 124  Q
    |    
T  46348462 c 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 22515866 - 22515964
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtg 122  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||| |||||| |||  ||||||||||||||| | ||||  |||||| |||||||||    
T  22515866 gtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 1486709 - 1486790
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    ||||||||| |||||||||||||||||||||| |||  ||||||||||||||| | ||||| ||||||||| ||||||||||    
T  1486709 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgt 1486790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 16927165 - 16927268
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    ||||||||||||| |||| || |||||| | |  |||||||||||||||||||||||  ||||||||||||||| |||| | ||||||||||||| ||||    
T  16927165 gtgtcggatatgt-tcgtatctgacaccaacatatataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgt 16927263  T
Q  124 cgtgt 128  Q
    |||||    
T  16927264 cgtgt 16927268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 37598910 - 37598816
Alignment:
Q  25 tgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccg 120  Q
    ||||||| | || |||||||||||||||| |||||||||||||||||||| | |||  ||||||||||||||||| ||||  ||||||||||||||    
T  37598910 tgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 38078649 - 38078740
Alignment:
Q  33 atgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    |||| |||||||||||||||| |||| |||||||| |||||||| |||  ||||||||||||||| | |||| |||||||||||| ||||||    
T  38078649 atgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtc 38078740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 42359445 - 42359532
Alignment:
Q  41 tgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgt 128  Q
    ||||||||||||| |||| ||||||||||||||| | |||  ||||||||||||||| | ||||| ||||||||||||||||| ||||    
T  42359445 tgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgt 42359532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 28273089 - 28273182
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtctatatccgtg 139  Q
    |||||||| |||| |||||||||||||||||||||  ||||||||| ||||||| ||||| | ||||||||||| |||| ||||  ||||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtccttgtcatgtccgtatccgtg 28273182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 22881609 - 22881689
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    |||||||||||||||| |||| |||||||||| |||||| |||  ||||||||||||||||| ||||  ||||||||||||    
T  22881609 tcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 1815343 - 1815240
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||| |||||||| |||| ||||||| |||||||| |||| ||||||||||||||||| |||  |||| |||| |||| || ||||  |||||||||||    
T  1815343 gtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 1815244  T
Q  118 ccgt 121  Q
    ||||    
T  1815243 ccgt 1815240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 24577186 - 24577259
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    ||||||||| |||| ||||||||||||||||| |||  ||||||||||||||||| ||||| |||||| |||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 5927336 - 5927424
Alignment:
Q  41 tgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||| || |||| |||||||| | ||||||||||  |||||||||||||||   ||| | |||||||||||||||||||||||    
T  5927336 tgtccgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtc 5927424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 7918211 - 7918295
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||| || || ||||||||||||||||||| |||  || ||||||||||||| |||||| ||||||| |||| ||||||||||    
T  7918211 cgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtc 7918295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 398778 - 398849
Alignment:
Q  58 tataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||||||||||| |||  |||||||||||||||   ||||  |||||||||||||||||||||||    
T  398778 tataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 398849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 18556456 - 18556535
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    ||||||| |||||| |||||||| | |||||| ||| |||||||||||||||| | ||||  ||||||||||||||||||    
T  18556456 cgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 36878541 - 36878447
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    |||||||| |||| ||||||| |||||||| || ||||||||||||||||||| |||  || ||||||||||||   ||||  ||||||||||||    
T  36878541 gtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 51410105 - 51410031
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatga-cattttcaaattattag 97  Q
    |||||||||| || |||||||||||||||| |||| ||||||||||||||||| |||   |||||||||||||||    
T  51410105 gtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattag 51410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 18337415 - 18337338
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatt 95  Q
    ||||| |||||||| | || | |||||||||||||| |||| ||||||||||||||||| |||  |||||||||||||    
T  18337415 gtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 40181935 - 40181878
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||||||||||| ||||||||||||||||||| |||  || ||||||||||||    
T  40181935 gtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattag 40181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 47989556 - 47989472
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||||||| |||| ||||||||||||||||| |||  |||| ||||||||| || ||||  |||||||||||| |||||||||||    
T  47989556 cgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgtgtct 47989472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 21530769 - 21530697
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    |||||||| |||| |||||||||||||||| ||||||||||| ||  ||||||||||  || |||||||||||    
T  21530769 gtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 21530697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 31672889 - 31672969
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtcc 119  Q
    ||||||||||||||| |||| ||||||||||||||||  |||  ||||||||||||||| | ||||   ||||||||||||    
T  31672889 cgtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcc 31672969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 40258912 - 40258984
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    |||||||| | || ||||||| |||||||| |||| ||||||||||||||||| |||  ||||||||||||||    
T  40258912 gtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 5944342 - 5944256
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatga--cattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||||||||||||||||||||| |||    ||||||||||||||| | || |  |||||||||||| ||||||||||    
T  5944342 cgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtc 5944256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 6332729 - 6332671
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtc 104  Q
    |||||||||||||| ||||||||||||||||| |||  ||||||||||||||||| ||||    
T  6332729 cgacaccgatacttgtaattacactgaattatgtga-tttttcaaattattagttgtgtc 6332671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 19637854 - 19637799
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaat 73  Q
    ||||| |||||||||||||||||||||||||||||| || ||| |||||| |||||    
T  19637854 gtcccggtgtcggatatgtatcgtgtccgacaccgacacatatgattacattgaat 19637799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 9629900 - 9629982
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtg 127  Q
    ||||||||| ||||||||| ||||||||||||||||  || ||||||||||||   |||| | ||||| |||||| |||||||    
T  9629900 cgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgtcggtgtccatgtcgtg 9629982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 34298488 - 34298410
Alignment:
Q  52 gatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||| ||||||||||||||||||| |||  || |||||||||||||  ||||   |||||||| ||||||||||||||    
T  34298488 gatacgtataattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtct 34298410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 19058850 - 19058951
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtc-agtgtccgtgtcgtgtctatatccg 137  Q
    ||||||||||||||| |||| ||||||||||||||||| | |  |||| |||||||||| | ||||  |||||| |||||  ||||||||||  ||||||    
T  19058850 cgtgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtcaagtgtgtgtgtcgtgtccgtatccg 19058949  T
Q  138 tg 139  Q
    ||    
T  19058950 tg 19058951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 35702580 - 35702661
Alignment:
Q  37 atcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    |||||||||||||| || |||| |||||||||| |||||| |||  ||||||||||||||| | ||||  | ||||||||||    
T  35702580 atcgtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcggcatgtcagtgtc 35702661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 52903314 - 52903273
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatga 80  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  52903314 cgtgtccgacaccgacacatataattacactgaattatatga 52903273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 6612171 - 6612255
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| ||||||||||||||||| | |  ||||||||||||||  | | ||  ||||||| |||||||||||||||    
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtc 6612255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 8842694 - 8842798
Alignment:
Q  25 tgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    ||||||||| || |||||||||||||| |||| |||||||||| | |||||||||   || |||||||| ||||  || |  |||||||||||| |||||    
T  8842694 tgtcggatacgtgtcgtgtccgacaccaatacatataattacattaaattatatgtttttctcaaattactagtggtgccggcgtgtcagtgtctgtgtc 8842793  T
Q  125 gtgtc 129  Q
     ||||    
T  8842794 atgtc 8842798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 14332635 - 14332695
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagt 98  Q
    |||||||||||||||| || |||||||||||| |||||| |||  || |||||||||||||    
T  14332635 tcgtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattagt 14332695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 48450592 - 48450671
Alignment:
Q  50 ccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||| |||| |||||||||| |||||| | |  ||||||||||||||| | |||   |||||||||||||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtc 48450671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 113358 - 113289
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcag 114  Q
    ||||||| | |||| ||||||||||||||||| |||  ||||||||||||||| | ||||  ||||||||    
T  113358 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 1864874 - 1864931
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    ||||||| ||||||| || ||||||||||||||||||| |||  || |||||||||||    
T  1864874 cgtgtccaacaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 139
Target Start/End: Original strand, 5898259 - 5898360
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtctatatccg 137  Q
    ||||||| ||||||||  | ||||||||||||||||||| |||  |||||| ||||||||   ||||  ||| |||||||| ||||| ||||  ||||||    
T  5898259 tcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtccgtatccg 5898358  T
Q  138 tg 139  Q
    ||    
T  5898359 tg 5898360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 24334699 - 24334736
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattat 76  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  24334699 cgtgtccgacaccgacacttgtaattacactgaattat 24334736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 25272541 - 25272456
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||||||| ||||||||||||||| |||||| |||  || ||||||| |||  | |||||| ||||| ||||  |||||||||||    
T  25272541 cgacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtcaaagtgtctgtgtttgtgtcgtgtct 25272456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 32434726 - 32434775
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtc 104  Q
    |||| |||||||| |||||||| |||| ||||||||||||||||| ||||    
T  32434726 acttgtaattacaatgaattatgtgactttttcaaattattagttgtgtc 32434775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 39130762 - 39130851
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||||||| || |||||||||||| |||||||| |  || | ||||||||| |  ||||| ||||||| | ||| |||||||||    
T  39130762 gtgtccgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtc 39130851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 40917808 - 40917726
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| |||||||||| |||| |  ||  ||||||||||||||| | ||||  ||||||||| |||||||||||||    
T  40917808 cgacaccgagacttgtaattacacttaattgt--gattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtc 40917726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 1704992 - 1705044
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||| |||| ||||||| ||||||||| |||  |||||||||||||||    
T  1704992 cgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattag 1705044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 5376500 - 5376584
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| ||||||||||||||||| | |  || | ||||||||||   ||||  ||||| |||||||||||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtc 5376584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 9033021 - 9033085
Alignment:
Q  59 ataattacactgaattatatgacatttt-caaattattagttatgtcaacgtgtcagtgtccgtg 122  Q
    |||||||||||||||||| |||  |||| ||||||||||||  |||  |||||||||||||||||    
T  9033021 ataattacactgaattatgtgatttttttcaaattattagtggtgttgacgtgtcagtgtccgtg 9033085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 14359532 - 14359615
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtctatatccgtg 139  Q
    |||| |||||||||| |||||| |||  ||||||||||||||| | ||||  |||||| ||||| ||||||||||  ||||||||    
T  14359532 acttgtaattacactaaattatgtgat-ttttcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccgtatccgtg 14359615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 20157350 - 20157434
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| || ||| ||||||||||||||| |||  || ||| ||||||||   |||| | ||||||||| ||||||||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtc 20157434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 21378635 - 21378547
Alignment:
Q  47 acaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtctatatc 135  Q
    ||||||| |||| ||||||||||||||||| | |  ||||||| ||||||| | ||||   |||||  ||||||||||||||| |||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcgtgtccatatc 21378547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 23531790 - 23531830
Alignment:
Q  57 ttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||||| |||||||| ||| ||||||||||||||||    
T  23531790 ttataattacattgaattatgtgatattttcaaattattag 23531830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 30749904 - 30749868
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattat 76  Q
    |||||||||||||| || |||||||||||||||||||    
T  30749904 gtgtccgacaccgacacatataattacactgaattat 30749868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 30771355 - 30771319
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattat 76  Q
    |||||||||||||| || |||||||||||||||||||    
T  30771355 gtgtccgacaccgacacatataattacactgaattat 30771319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 31694710 - 31694785
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacatttt--caaattattagttatgtcaacgtgtcagtgtc 118  Q
    ||||||||| |||| |||||| |||||||||| |||  ||||  ||||||||||| |||||| |||| ||||||||    
T  31694710 cgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcgacgtatcagtgtc 31694785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 21191051 - 21191140
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||||||| |||| ||||||||||||||||| |||  ||||||||||||||| | ||||  | |||||||||||||||||||||    
T  21191051 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtc 21191140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 6247687 - 6247597
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||||||| |||| ||||||||||||||||| |||  ||||||||||||||| | ||||  ||||||||||| ||| |||||||    
T  6247687 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtc 6247597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 13287399 - 13287483
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| || |||||||||||||| |||  ||||||||||||||  | |||| |||||| |||||||||||||||||    
T  13287399 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtc 13287483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 28588653 - 28588725
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    ||||| ||||||| |||||||||||||||| || ||||||||||||||||||| |||  || |||||||||||    
T  28588653 gtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 39698600 - 39698524
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgt 121  Q
    |||||| || |||| ||||||||||||||||| |||  ||||||||||||||| | ||||| |||||||||||||||    
T  39698600 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 15405065 - 15405137
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||| |||||||| ||||||||||||  ||||||||||||||||| |||||  |||| |||||||||||||||||    
T  15405065 acttgtaattacattgaattatatgattttttcaaattattagttgtgtca--gtgttagtgtccgtgtcgtgtc 15405137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 30502361 - 30502440
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||| |||||||| |||| |||||||||||||||| || ||||||||||||||||||  |||  || ||||||||||||    
T  30502361 gtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattag 30502440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 30542704 - 30542783
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||| |||||||| |||| |||||||||||||||| || ||||||||||||||||||  |||  || ||||||||||||    
T  30542704 gtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattag 30542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 14422969 - 14422879
Alignment:
Q  37 atcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||  ||||| |||||||||| | | ||   |||||||||||| |||||||||    
T  14422969 atcgtgtccgacatcgaaacttataattacactgaattatgtg--atttttaaattattagctgtatcggtgtgtcagtgtccttgtcgtgtc 14422879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 21351906 - 21351979
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtcc 119  Q
    |||||||| |||| ||||||||||||||||| |||| ||||| ||||||||||| ||||   ||||||||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 15382539 - 15382452
Alignment:
Q  44 ccgacaccgatacttataattacactgaattatatgacatttt--caaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||| |||| |||||| ||||||||||||||  ||||  ||||||||||| | ||||  ||||||| |||||||||||||||    
T  15382539 ccgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtc 15382452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 21522809 - 21522725
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| | || ||||||||||||||||| | |  |||| |||||||||| | ||||  |||||||||||||||||||||||    
T  21522809 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 21522725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 21533375 - 21533291
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| | || ||||||||||||||||| | |  |||| |||||||||| | ||||  |||||||||||||||||||||||    
T  21533375 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 21533291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 139
Target Start/End: Original strand, 21576738 - 21576841
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc--gtgtctatatc 135  Q
    |||||||||||| ||| |||| ||||||||||||||||| |||  ||||||||||||||| | |||   ||| ||||||| ||||||  |||||| ||||    
T  21576738 tcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgttcgtgtccagtgtctgtatc 21576837  T
Q  136 cgtg 139  Q
    ||||    
T  21576838 cgtg 21576841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 26312838 - 26312798
Alignment:
Q  35 gtatcgtgtccgacaccgatacttataattacactgaatta 75  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  26312838 gtatcgtgtccgacaccgatacatataattacactgaatta 26312798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 10298628 - 10298553
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccg 120  Q
    ||||||||| |||| |||||||| || ||||| |||| ||||||||||||||||| ||||  ||||| ||||||||    
T  10298628 cgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgtccg 10298553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 33178089 - 33178014
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagt 115  Q
    |||||||||||||| |||| |||||||||| |||||| |||  |||| |||||||||||| ||||  |||||||||    
T  33178089 gtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 36642763 - 36642846
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||| ||||||| ||||||| || ||| | || ||||||||||||||  | ||||  |||||||||||||||||||||||    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtc 36642846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 8420089 - 8420011
Alignment:
Q  42 gtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccg 120  Q
    |||||||||||| |||| |||||||| |||||||| | |  ||||||||||||||| ||||||  ||||||| ||||||    
T  8420089 gtccgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtcattgtccg 8420011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 14674323 - 14674249
Alignment:
Q  50 ccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    |||| |||| |||||||||| |||||| |||  ||||||||||||||| | ||||  ||||||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 40131680 - 40131626
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagtt 99  Q
    ||||||||||| ||||||||| |||||||||| |||  |||||||||||||||||    
T  40131680 cgacaccgatatttataattaaactgaattatgtgattttttcaaattattagtt 40131626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 4105308 - 4105232
Alignment:
Q  55 acttataattacactgaattatatgacatttt--caaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||| ||||||||||||||||| |||  ||||  ||||||||||||||||||  ||||||||| |||||||| ||||    
T  4105308 acttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgtgtcatgtc 4105232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 6326292 - 6326381
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| | || |||| ||||||||||||||||| | |  || |||||||| |||  |||||  |||||||||||||||||||||||    
T  6326292 gtgtccgacgctgacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtc 6326381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 21542089 - 21542004
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    ||||||||| |||| ||||||||||||||||| | |  |||| |||||||||||| ||||  | ||||| |||| |||||||||||    
T  21542089 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgtct 21542004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 6072352 - 6072408
Alignment:
Q  83 ttttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtctatatccgtg 139  Q
    |||| |||||||||||||||||  ||||||||| ||||| ||||||| |||||||||    
T  6072352 ttttaaaattattagttatgtcggcgtgtcagtatccgtatcgtgtccatatccgtg 6072408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 6770612 - 6770523
Alignment:
Q  33 atgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    |||| ||||||||||||| || ||  |||| ||||||||||||| |||  || | |||||||||||| |||||  |||||||||||||||||    
T  6770612 atgtgtcgtgtccgacactgacac--ataagtacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgtgtc 6770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 22013461 - 22013389
Alignment:
Q  57 ttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||||||| |||||| | |  ||| ||||||||||| | ||||  |||||||||||||||||||||||    
T  22013461 ttataattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 22013389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 24906297 - 24906385
Alignment:
Q  41 tgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||| ||||| |||| ||||||||||||||||| | |  ||||||||||||||  | |||   ||||||||||| |||||||||||    
T  24906297 tgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtc 24906385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 43564947 - 43564891
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattat 94  Q
    |||||||||||||||| ||||||||||||||| |||||| |||  ||| ||||||||    
T  43564947 tcgtgtccgacaccgacacttataattacactaaattatgtgatttttccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 18421811 - 18421890
Alignment:
Q  15 tcagtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattat 94  Q
    |||||||| ||| |||| |||| ||||||||||| |||| || ||||||||||||| ||||| |||  || |||||||||    
T  18421811 tcagtcccggtgccggacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 23012381 - 23012460
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||| ||||| || |||| |||||||| ||||||| || |||||||||| | ||||||||||  || ||||||||||||    
T  23012381 gtcccggtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattag 23012460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 42029823 - 42029780
Alignment:
Q  33 atgtatcgtgtccgacaccgatacttataattacactgaattat 76  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||    
T  42029823 atgtgtcgtgtccgacaccgatacatataattacattgaattat 42029780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 15884054 - 15884016
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattat 76  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  15884054 tcgtgtccgacaccgacacttgtaattacactgaattat 15884016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 25863253 - 25863179
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||||||||||||||||| |  || |||||||||||   ||||| |||||||  |||| ||||||||||    
T  25863253 acttataattacactgaattatatcattttctcaaattattatacatgtcgacgtgtcgatgtctgtgtcgtgtc 25863179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 41995515 - 41995449
Alignment:
Q  60 taattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    |||||||| |||||||| |||  ||||| ||||||||||| ||||  |||||||||||| |||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgt 41995449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 31084414 - 31084309
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacac-----cgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtc 112  Q
    ||||| |||||||| | || |||||||||||||     ||| |||| |||||||| |||||||| |||  ||||||||||||||| | ||||  ||||||    
T  31084414 gtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 31084315  T
Q  113 agtgtc 118  Q
    ||||||    
T  31084314 agtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 42893424 - 42893367
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||| |||||||| |||| ||||||||||| ||||| |||  |||||||||||||||    
T  42893424 gtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattag 42893367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 43001849 - 43001780
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    |||| ||||||||||||||||| | |  |||||||||||||||   |||| || ||||||||||||||||    
T  43001849 acttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtc 43001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 2548451 - 2548415
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattat 76  Q
    |||||||||||||| |||||| |||||||||||||||    
T  2548451 gtgtccgacaccgacacttatgattacactgaattat 2548415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 7677764 - 7677712
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||| |||| ||||| ||||||||||| |||  |||||||||||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattag 7677712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 19552562 - 19552626
Alignment:
Q  64 tacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgt 128  Q
    |||||| |||||| |||  ||||||||||||||  | ||||  ||||||||||||||||||||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 41558724 - 41558764
Alignment:
Q  86 tcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    ||||||||||| || |||||| |||||||||||||||||||    
T  41558724 tcaaattattatttgtgtcaatgtgtcagtgtccgtgtcgt 41558764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 8e-19; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 1401091 - 1401007
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtg 122  Q
    ||||||| ||||||||||||||||||||||||||||||| |||  || ||||||||||||  || ||| ||||||||||||||||    
T  1401091 tcgtgtcggacaccgatacttataattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtccgtg 1401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 33994292 - 33994187
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    |||| ||| |||| ||||||| |||||||| |||| ||||| ||||||||||| |||| ||||||||||| |||||  |||  ||||||||||| |||||    
T  33994292 gtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgttcgtgt 33994193  T
Q  124 cgtgtc 129  Q
    ||||||    
T  33994192 cgtgtc 33994187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 15680889 - 15680789
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    |||||||| | || |||||||||||||||| ||||||||||||||| |||||| |||  ||||  ||||||||| ||||||  ||||||||||||| |||    
T  15680889 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtccatgt 15680790  T
Q  124 c 124  Q
    |    
T  15680789 c 15680789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 26733370 - 26733278
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtct 130  Q
    |||||||||||||||| || | |||||| |||||||||| |||  || ||||||||||||   |||| |||||||||||||||||||||||||    
T  26733370 tcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtct 26733278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 25481970 - 25481877
Alignment:
Q  36 tatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||||||||| | |||| ||||||||||||||||| |||  ||||||||||||||| | ||||  ||||||| ||||| ||| |||||    
T  25481970 tatcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtc 25481877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 24339701 - 24339617
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| ||||||||||||||||| |||  ||||||||||||||| | ||||  ||||||| ||||| |||||||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtc 24339617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 27945100 - 27945016
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| ||||||||||||||||| | |  || |||||||||||||  ||||  |||||||||||||||||||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtc 27945016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 13300468 - 13300409
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtca 105  Q
    |||||||| |||  |||||||||||||||||||||  |||||||||||||||||||||||    
T  13300468 gacaccgagactggtaattacactgaattatatgattttttcaaattattagttatgtca 13300409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 21880232 - 21880133
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgt 123  Q
    |||||||| |||| |||||||||||||||| |||| ||||||||||||||||| | |  || ||||||||||||  ||||| || ||| ||||| |||||    
T  21880232 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtccacatgttagtgttcgtgt 21880133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 21864894 - 21864781
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatga--cattttcaaattattagttatgtcaacgtgtcagt 115  Q
    ||||| |||||||| | || |||||||||||| ||| |||| |||||||||| ||||||||||    ||||||||||||||| | ||||   ||||| ||    
T  21864894 gtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgt 21864795  T
Q  116 gtccgtgtcgtgtc 129  Q
    ||||||||||||||    
T  21864794 gtccgtgtcgtgtc 21864781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 5409836 - 5409917
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    ||||||||| |||| ||||| ||||||||||| |||  ||||||||||||||| | | ||| ||||||||||||| ||||||    
T  5409836 cgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgt 5409917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 7197271 - 7197375
Alignment:
Q  19 tccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    |||| |||||||| |||| | |||||||||||||| |||| |||||||| ||||||| ||||  |||| |||||||||| | ||||  ||||||| ||||    
T  7197271 tcccggtgtcggacatgtgttgtgtccgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtcaatgtc 7197370  T
Q  119 cgtgt 123  Q
     ||||    
T  7197371 tgtgt 7197375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 8234226 - 8234146
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtc 104  Q
    |||||||| |||| |||||||||||||||  |||| ||| ||||||||||||| | |  ||||||||||||||||| ||||    
T  8234226 gtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtc 8234146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 43027469 - 43027553
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||| || |||||||| ||||| |||  ||||||||||||||| |  |||  |||||||||||||||||||||||    
T  43027469 cgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtc 43027553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 11061070 - 11061157
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    |||||| |||||||| |||| |||||| ||| |||||| |||  ||||||||||||||| | ||||   |||||||||||||||||||    
T  11061070 cgtgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgt 11061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 11665441 - 11665508
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtca 113  Q
    |||| ||| ||||||||||| |||||||||| |||  ||||||||||||||||| ||||| |||||||    
T  11665441 gacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtgtca 11665508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 2034481 - 2034407
Alignment:
Q  64 tacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtctatatccgt 138  Q
    |||||| |||||||||| ||| |||||||||||||  |||| |||||| ||| |||||||||||||  |||||||    
T  2034481 tacactaaattatatgatattctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtcagtatccgt 2034407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 138
Target Start/End: Complemental strand, 24105738 - 24105644
Alignment:
Q  44 ccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtctatatccgt 138  Q
    ||||| |||| |||| |||||||||||||| ||   |  ||||||||||||||| | ||||  |||||||||||||||||||||||  |||||||    
T  24105738 ccgactccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtatccgt 24105644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 3721158 - 3721070
Alignment:
Q  39 cgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgt 128  Q
    ||||||||||||||| || |||||||| ||| |||||| |||  || ||||||||||||  ||||| |  ||||||||||||||||||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattag-catgtcgaaatgtcagtgtccgtgtcgtgt 3721070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 5236045 - 5235961
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||||||||  |||||||||||| |||||||| |  || | ||||||||||   |||| ||||||||||||| ||||||||||    
T  5236045 cgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtc 5235961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 13770750 - 13770666
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||| ||| |||| ||||||||||||||||| | |  |||| |||||||||| | ||||  ||| |||||||||||||||||||    
T  13770750 cgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtc 13770666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 20549870 - 20549798
Alignment:
Q  25 tgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||| |||| | |||||||||||||| || ||||||||||||||||||  |||  || ||||||||||||    
T  20549870 tgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattag 20549798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 3991383 - 3991324
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtc 104  Q
    ||||||||| |||| |||||| |||||||||| |||  ||||||||||||||||| ||||    
T  3991383 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtc 3991324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 11831483 - 11831432
Alignment:
Q  53 atacttataattacactgaattatatgacattttcaaattattagttatgtc 104  Q
    |||||| |||||||||| ||||||||||  ||||||||||||||||| ||||    
T  11831483 atacttgtaattacactaaattatatgattttttcaaattattagttgtgtc 11831432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 11890919 - 11890970
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    ||||||| | ||| ||||||||||||||||||||||  ||||||||||||||    
T  11890919 cgacacctacactcataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 21140982 - 21141065
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgt 128  Q
    |||| |||| || |||||| ||||||||||||||||  || | |||||||||||  |||| ||||||| | |||||||||||||    
T  21140982 cgactccgacacctataatcacactgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgt 21141065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 39138515 - 39138472
Alignment:
Q  33 atgtatcgtgtccgacaccgatacttataattacactgaattat 76  Q
    ||||||||||||||||||||| |  |||||||||||||||||||    
T  39138515 atgtatcgtgtccgacaccgacatatataattacactgaattat 39138472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 41020570 - 41020483
Alignment:
Q  30 gatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||||| |||||| | |||||||  | |||||||||||| |||||| |||  |||  |||||||||||| |||| ||||||||||||    
T  41020570 gatatgtgtcgtgttcaacaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgtgtcgacgtgtcagtgt 41020483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 7058485 - 7058431
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagtt 99  Q
    ||||||| | |||| |||||||||||||||| ||||  |||||||||||||||||    
T  7058485 cgacaccaacacttgtaattacactgaattacatgattttttcaaattattagtt 7058431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 42720885 - 42720963
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    ||||| ||||| || || |||||||||| | |||||| |||  |||||||||||||||   ||||||||||||||||||    
T  42720885 gtgtcagacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgtc 42720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 6630912 - 6630985
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    ||||| ||| || ||||||||||||||||||  |||| || |||||||||||||  ||||  ||||||||||||    
T  6630912 cgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 9408334 - 9408407
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtc 118  Q
    ||||||||| |||| |||||||||| |||||| |||  |||||||||||||| || ||||   |||||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 10042996 - 10042915
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    |||||| || |||||||||||| || |||||| |||  || |||||||||||||  ||||  ||||| ||||||||||||||    
T  10042996 cgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtcgt 10042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 18013074 - 18013155
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    |||||| || || ||||||||||||||||||| | |  |||| |||||||||||  |||||   ||||||||||||||||||    
T  18013074 cgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgtcgt 18013155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 40287352 - 40287428
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    |||||||| ||||| |||| ||||||||||||| |||||||  ||||||||||||| ||| ||||  |||||| ||||    
T  40287352 gtgtccgataccgacacttgtaattacactgaa-tatatgattttttcaaattattcgttgtgtcggcgtgtccgtgt 40287428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 598294 - 598182
Alignment:
Q  18 gtccctgtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||| |||||||| | || ||||||| |||||||| ||||| ||||||| | |||||  |||  || | ||||||||||   |||| | ||||||||||    
T  598294 gtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgtcgatgtgtcagtgt 598195  T
Q  118 ccgtgtcgtgtct 130  Q
    ||||||| |||||    
T  598194 ccgtgtcatgtct 598182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 19992060 - 19992008
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||||||| |||||||||||||||||| ||| |||  || ||||||||||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattag 19992008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 25956525 - 25956473
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattat 76  Q
    ||||| || ||||||||||||||||||||| |||| | |||||| ||||||||    
T  25956525 gtgtccgacatgtatcgtgtccgacaccgacacttgtgattacattgaattat 25956473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 26033465 - 26033513
Alignment:
Q  49 accgatacttataattacactgaattatatgacattttcaaattattag 97  Q
    ||||| |||| ||||||||||||||||| |||  |||||||||||||||    
T  26033465 accgacacttgtaattacactgaattatgtgattttttcaaattattag 26033513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 35862023 - 35861951
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    |||||| || ||||| ||||||| |||||||| |||  ||||||||||||||||| ||||  ||||| |||||    
T  35862023 cgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 35861951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 178819 - 178903
Alignment:
Q  46 gacaccgatacttataattacactgaattat-atgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||| || |||| ||||||||||||||||| ||||  ||||||||||||||||| ||||  |||||||||||||||||||||||    
T  178819 gacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 178903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 20231 - 20147
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||| || |||| ||||||||||||||||| |||  ||||||||||||||| | ||||  ||||||| |||||||||||||||    
T  20231 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtc 20147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 70358 - 70286
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    |||||||| | || |||||||||||||||| |||||||||||||||||||||| | |  ||||||||||||||    
T  70358 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattatta 70286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 241653 - 241569
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| ||| ||||||||||| |||||| |||  ||| ||||||||||| | ||||  |||||||||||||||||||||||    
T  241653 cgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 241569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 38 - 128
Target Start/End: Original strand, 455 - 545
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgt 128  Q
    |||||||||||||||| |||| ||||||||||||||| | |||  |||||||||||||||   ||||  ||| |||||||||||| |||||    
T  455 tcgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgt 545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 8075 - 8010
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtc 104  Q
    |||||||||||||||| |||| ||||||||||| |||||||||  ||||||||||||||||| ||||    
T  8075 tcgtgtccgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtc 8010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 8725 - 8641
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| ||||||||||| |||||| ||| |||  ||   ||||||||||   |||| |||||||||||||| |||||||||    
T  8725 cgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtc 8641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 51883 - 51791
Alignment:
Q  35 gtatcgtgtccgacaccgata---cttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    |||||||||| |||||||| |   ||| ||||||||||||||||| |||  ||||||||||||||| | ||||  ||||||||||||||||||    
T  51883 gtatcgtgtctgacaccgacaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 1724 - 1652
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattatta 96  Q
    |||||||| |||| |||||||||||||||| ||||||||||| ||  ||||||||||  || |||||||||||    
T  1724 gtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 1652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 13460 - 13380
Alignment:
Q  44 ccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    ||||||||||  ||| ||||| ||||||||||| |||  || |||||||||||||| ||||  ||||||||||||||||||    
T  13460 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 13380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 21867 - 21947
Alignment:
Q  44 ccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtc 124  Q
    ||||||||||  ||| ||||| ||||||||||| |||  || |||||||||||||| ||||  ||||||||||||||||||    
T  21867 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 21947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 46741 - 46657
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| | || ||||||||||||||||| |||  ||||||||||||||  | ||||  ||||||| |||||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtc 46657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 14607 - 14530
Alignment:
Q  24 gtgtcggatatgtatcgtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtc 104  Q
    |||||||| | || ||||||||||||||   |||| ||||||||||||||||| |||  ||||||||||||||||| ||||    
T  14607 gtgtcggacacgtgtcgtgtccgacacc---acttgtaattacactgaattatgtgattttttcaaattattagttgtgtc 14530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 19624 - 19551
Alignment:
Q  55 acttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||| ||||||||||||||||| |||  ||||||||||||||||| | ||  |||||||||||| ||||||||||    
T  19624 acttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtc 19551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 17750 - 17824
Alignment:
Q  46 gacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccg 120  Q
    |||||||| |||| |||||||||| |||||| |||  ||||||||||||||||| ||||| ||||| | ||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgttattgtccg 17824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 23479 - 23395
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    ||||||||| |||||||||||||||||||||| |||  ||||  | ||||||  | ||||  |||||||||||| ||||||||||    
T  23479 cgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtc 23395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 45523 - 45561
Alignment:
Q  38 tcgtgtccgacaccgatacttataattacactgaattat 76  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  45523 tcgtgtccgacaccgacacttgtaattacactgaattat 45561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 56981 - 56895
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtcta 131  Q
    |||||| || |||||| ||||||||||||||||| |  || ||||||||| |  | | ||||||||||||||| ||||| |||||||    
T  56981 cgacactgacacttatgattacactgaattatatcattttctcaaattataatctttatcaacgtgtcagtgtgcgtgttgtgtcta 56895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 7027 - 7108
Alignment:
Q  40 gtgtccgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgt 121  Q
    |||||||||||| | |||| |||||| ||| |||||| | |  ||||||||||||||| | |||| |||| |||||||||||    
T  7027 gtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtccgt 7108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 130538 - 130457
Alignment:
Q  48 caccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgtgtc 129  Q
    |||||| |||| ||||||||||||||||| |||  |||||||| |||||  | ||||  | ||||| |||||||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtc 130457  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 263372 - 263453
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgtccgtgtcgt 126  Q
    |||||| || |||||||||||||||||||||| ||   || ||||||||||||   |||  || ||||||||||||||||||    
T  263372 cgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgt 263453  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 8635 - 8707
Alignment:
Q  45 cgacaccgatacttataattacactgaattatatgacattttcaaattattagttatgtcaacgtgtcagtgt 117  Q
    ||||||||| | || |||||| || ||||||| ||| |||||||||||||||||| ||||  | |||||||||    
T  8635 cgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtcggcatgtcagtgt 8707  T

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