View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2619_high_1 (Length: 584)
Name: NF2619_high_1
Description: NF2619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2619_high_1 |
 | |
|
| [»] scaffold0428 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 452; Significance: 0; HSPs: 16)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 9 - 572
Target Start/End: Complemental strand, 31561417 - 31560854
Alignment:
| Q |
9 |
gacatcatcatctggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagt |
108 |
Q |
| |
|
||||| || ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31561417 |
gacattattatctggactttctctcaatctggacaatgcactcttccattcagtcacattacgaccaaacaaaaatgagcccaatactgtaattgctagc |
31561318 |
T |
|
| Q |
109 |
ggtagacctttagcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgt |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31561317 |
ggtagacctttagcataattcagtatctcatctgccaaattttgataatcactcataataattttctcaactttgaaagcttttcgacaaaataacatgt |
31561218 |
T |
|
| Q |
209 |
gagactcggcctgattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccc |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31561217 |
gagactcggcctgattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccc |
31561118 |
T |
|
| Q |
309 |
tgcacctaaccattcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttctt |
408 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| | ||||||| || || |
|
|
| T |
31561117 |
tgcacctaaccattcacgacgcacagctattttttccaattgtccaacttgatctacattatcaagaatcagaagggccctttcatgacatagatttatt |
31561018 |
T |
|
| Q |
409 |
catatcaaattagtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcat |
508 |
Q |
| |
|
| ||||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
31561017 |
cgcatcaaattagttgcgctgtaatgattgcatatttgattgtgttctatgccgacagtttgaagtaggatttgcttttgtgcatcgaggggaccatcac |
31560918 |
T |
|
| Q |
509 |
atgatctataaattttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttg |
572 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
31560917 |
ctgatctataaattttgcttacatcatcaataaaacaggatgcactaaatcgatgagatatttg |
31560854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 12 - 574
Target Start/End: Original strand, 33273267 - 33273829
Alignment:
| Q |
12 |
atcatcatctggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtggt |
111 |
Q |
| |
|
||||| || ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
33273267 |
atcattatttggactttctctcaatctagccagggcactcttccattcagtcacattacgaccaaacaaaaatgagcccaatactataattgctagtggt |
33273366 |
T |
|
| Q |
112 |
agacctttagcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgtgag |
211 |
Q |
| |
|
||||| |||||||||| || ||||||| || || |||| ||||||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||| |
|
|
| T |
33273367 |
agaccattagcataatctagaatctcatacgctaagttttcataattactcataataactttctcaaatttgaaagctttttgacaaaataacttgtgag |
33273466 |
T |
|
| Q |
212 |
actcggcctgattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgc |
311 |
Q |
| |
|
| || | | ||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
33273467 |
aatctgtccaattcaaaagtggaactttgtaaactgcatccactccatagtatttcaatatatgctcatctctagaaatgattataattctactacctgc |
33273566 |
T |
|
| Q |
312 |
acctaaccattcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttcttcat |
411 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| ||| ||||| |||| ||||||||||||||||||||| |||||| |||||||||||| |||| | |
|
|
| T |
33273567 |
acctaaccattcacgatgcacacctattttttccaactgtgcaacttgatccacattatcaagaatcagaaggaccctttcacgacatagcctacttcgt |
33273666 |
T |
|
| Q |
412 |
atcaaattagtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcatatg |
511 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
33273667 |
atcaaattagttacgctgtaatgattgcatatttgatggtgttctatgccgagagtttgaagtaggatttgcttttgtgcatcgaggggaccatcatgta |
33273766 |
T |
|
| Q |
512 |
atctataaattttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttgat |
574 |
Q |
| |
|
|| |||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
33273767 |
atttataaattttgcttacatcatctataaaacaggatgcactaaatcgatgagatatttgat |
33273829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 9 - 569
Target Start/End: Original strand, 33411425 - 33411985
Alignment:
| Q |
9 |
gacatcatcatctggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagt |
108 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||||||||||||| || | || |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
33411425 |
gacatcattatgcggactttctctcaatctagccaatgcactcttccattcagccacactatgaccaaacaaaaatgagcccaatactttaattgctagt |
33411524 |
T |
|
| Q |
109 |
ggtagacctttagcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgt |
208 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
33411525 |
ggtagacctttagcataatctagtatctcatttgccaaattttgataatcactcataataattttctcaactttgaaagcttttcgacaaaataactcgt |
33411624 |
T |
|
| Q |
209 |
gagactcggcctgattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccc |
308 |
Q |
| |
|
||| || | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
33411625 |
aagaatctgtactattcataagtggaactttgtaaactacatccactccgtactctttcaatatatgctcatctctagaaatgataacgattctactacc |
33411724 |
T |
|
| Q |
309 |
tgcacctaaccattcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttctt |
408 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||| ||||||||||||| ||| | ||| || ||| | | |
|
|
| T |
33411725 |
cgcacctaaccattcacgatgcacagctattttttccaattgttcaacttgatccacattatcaaaaatcagaagggccttttcatgacgtaacctacgt |
33411824 |
T |
|
| Q |
409 |
catatcaaattagtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcat |
508 |
Q |
| |
|
| |||||||| ||| || |||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
33411825 |
cgtatcaaatcagttgcactgtaacgattgcatatttgatggtgttctatgccgacagtttgaagtaggatttgcctttgtgcatcgaggggaccatcat |
33411924 |
T |
|
| Q |
509 |
atgatctataaattttgcttacatcatcaatataacaagatgcactaaatcgatgagatat |
569 |
Q |
| |
|
|| |||||||||||||||||||||| || ||| ||||||||||||||||| |||||||||| |
|
|
| T |
33411925 |
ataatctataaattttgcttacatcgtctataaaacaagatgcactaaattgatgagatat |
33411985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 21 - 572
Target Start/End: Original strand, 33402098 - 33402649
Alignment:
| Q |
21 |
tggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtggtagaccttta |
120 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||| ||||||||||| || |
|
|
| T |
33402098 |
tggactttctctcaatttagccaatgcactcttccattcagtcacattacgaccgaacaaaaatgagcccaatactttaattgcaagtggtagaccacta |
33402197 |
T |
|
| Q |
121 |
gcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgtgagactcggcct |
220 |
Q |
| |
|
|||||||||| ||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||| |||| | |
|
|
| T |
33402198 |
gcataattcaatatcttatttgccaaattttgataattactcataataattttctcagctttgaaagcttttcgacaaaataacttatgagattcggtcc |
33402297 |
T |
|
| Q |
221 |
gattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaacca |
320 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| || |
|
|
| T |
33402298 |
aattcaaaagttgaactttgtaaactacgtccacttcatactctttcaatatatgttcatctctagaaatgataataattctactacccgcacctaaaca |
33402397 |
T |
|
| Q |
321 |
ttcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttcttcatatcaaatta |
420 |
Q |
| |
|
||||||||||||| |||||||||||| |||||||||| |||| |||||||||| ||||||||| ||| ||| ||||| |||||| | | |||||||| | |
|
|
| T |
33402398 |
ttcacgatgcacacctattttttccaattgttcaacttgatccacattatcaaaaatcagaagagccttttcacgacgtagcctacgttgtatcaaatca |
33402497 |
T |
|
| Q |
421 |
gtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcatatgatctataaa |
520 |
Q |
| |
|
| || |||||| ||||||||||||||||||| |||||||| | ||||||| ||||||||||||||||| |||| | || ||||||||| ||||||||| |
|
|
| T |
33402498 |
attgcactgtaacgattgcatatttgatggtgttctatgccgagagtttgatgtaggatttgcttttgtgcatcaattgggccatcatataatctataaa |
33402597 |
T |
|
| Q |
521 |
ttttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttg |
572 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||||||||||| ||||| |
|
|
| T |
33402598 |
ttttgcttacatcatcaatgaaacaggatgcactaaatcgatgagagatttg |
33402649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 9 - 572
Target Start/End: Original strand, 9168243 - 9168809
Alignment:
| Q |
9 |
gacatcatcatctggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagt |
108 |
Q |
| |
|
|||||| | |||||| ||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
9168243 |
gacatctttatctgggatttgtctcaatctagccaatgcactcttgcattcagtcacattacgaccaaacaaaaatgagcccaatactttaattgctaat |
9168342 |
T |
|
| Q |
109 |
ggtagacctttagcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgt |
208 |
Q |
| |
|
||||||||||| |||||||| |||||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||| || |
|
|
| T |
9168343 |
ggtagacctttcgcataattaagtatctcatatgccaaattttgataattactgctaatagttttctcaagtttgaaagcttttcgataaaataactagt |
9168442 |
T |
|
| Q |
209 |
gagactcggcctgattcaaaagtggaactttgtaaactacatcca---ctccatactctttcaatatatgctcatctctagaaatgataataattctact |
305 |
Q |
| |
|
|||| || | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||||||| |
|
|
| T |
9168443 |
gagattcagtctgattcaagagtggaactttgtaaactacatccagtactccatactctttcaatatatgctcatctcaagatacgataataattctact |
9168542 |
T |
|
| Q |
306 |
ccctgcacctaaccattcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagcctt |
405 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||||||||| |||||||||| ||||||||| | |
|
|
| T |
9168543 |
acccacacctaaccattcacgatgcacatctattttttccaattgttcaacttgatcaacattatcaagaatcaggagggccctttcacgacatagtata |
9168642 |
T |
|
| Q |
406 |
cttcatatcaaattagtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccat |
505 |
Q |
| |
|
| |||||||||||| ||||| ||||| ||||||||||||||||||| |||||||| | ||||||||||| ||||||||||||| ||||||| || |||| |
|
|
| T |
9168643 |
cgtcatatcaaatttgtggcactgtagcgattgcatatttgatggtgttctatgccgagagtttgaagtaagatttgcttttgtgcatcgagtgggccat |
9168742 |
T |
|
| Q |
506 |
catatgatctataaattttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttg |
572 |
Q |
| |
|
||| ||||||||||||| |||| |||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
9168743 |
catgcaatctataaattttacttatatcatcaataaaacaggatgcactaaatcgatgagatatttg |
9168809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 21 - 572
Target Start/End: Original strand, 33305970 - 33306521
Alignment:
| Q |
21 |
tggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtggtagaccttta |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||| |
|
|
| T |
33305970 |
tggactttctctcaatctagccaatgcactcttccattcagtcacattacgaccaaacaaaaatgagcccaatattgtaattgctaggggtagaccatta |
33306069 |
T |
|
| Q |
121 |
gcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgtgagactcggcct |
220 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||||||| || ||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
33306070 |
gcataactcaatatctcatctgccaaattttgataattacccaatataatgttctcaagtttgaaagcttttcgacaaaataacttgtgagattcggcca |
33306169 |
T |
|
| Q |
221 |
gattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaacca |
320 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||||||||| |
|
|
| T |
33306170 |
tattcaagagtggaactttgtaaaatacatccactccatactccttcaatatatgctcatctctagaaatgacaacgattctactacctgcacctaacca |
33306269 |
T |
|
| Q |
321 |
ttcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttcttcatatcaaatta |
420 |
Q |
| |
|
||| |||||||| | |||||||||| |||||||||| || ||||||||||||||||||||| || ||| ||||| |||||| | || |||||||| | |
|
|
| T |
33306270 |
ttcgcgatgcactgcaattttttccaattgttcaacttcattgacattatcaagaatcagaaggaccttttcacgacgtagcctacgtcgtatcaaatca |
33306369 |
T |
|
| Q |
421 |
gtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcatatgatctataaa |
520 |
Q |
| |
|
|| ||| ||||| |||||| |||| ||||||| |||||||| | |||||||| |||||||||||||||| ||| ||| |||||||||| | | ||||||| |
|
|
| T |
33306370 |
gttgcgttgtaacgattgcttattagatggtgttctatgcctagagtttgaaataggatttgcttttgtgcattgagtggaccatcatgtaaactataaa |
33306469 |
T |
|
| Q |
521 |
ttttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttg |
572 |
Q |
| |
|
||||| |||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
33306470 |
ttttggttacatcatcaatatagcaggatgcactaaatcgatgagatatttg |
33306521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 10 - 572
Target Start/End: Complemental strand, 33643209 - 33642647
Alignment:
| Q |
10 |
acatcatcatctggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtg |
109 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
33643209 |
acatcattatctggaccttctctcaatctagccaatgcaccattccattcagttacattacgaccaaacaaaaatgagctcaatattgtaattgctagtg |
33643110 |
T |
|
| Q |
110 |
gtagacctttagcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgtg |
209 |
Q |
| |
|
||||||| ||||||||| |||| ||| |||||| ||| ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||| || |
|
|
| T |
33643109 |
gtagaccattagcataacgtagtacatcagatgccaactttcgataattactcataatagttttctcaagtttgaaagcttttcgacaaaacaacttgca |
33643010 |
T |
|
| Q |
210 |
agactcggcctgattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccct |
309 |
Q |
| |
|
||| || | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||| ||| |
|
|
| T |
33643009 |
agattctgtctgattcaaaagtggaactttgtaaactacatccactccatacactttcaatatatgctcatctctagaaatgataataactatactacct |
33642910 |
T |
|
| Q |
310 |
gcacctaaccattcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttcttc |
409 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||| | |||||||||| |||| |||||||||||||||||||||||| | | ||||| |||||| | || |
|
|
| T |
33642909 |
gcacctaaccattcacgacgcacacctattttttcaaattgttcaacttgatcaacattatcaagaatcagaagggccttctcacgacgtagcctacgtc |
33642810 |
T |
|
| Q |
410 |
atatcaaattagtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcata |
509 |
Q |
| |
|
|||||||| ||| || ||| | ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| | ||||| |||||||||| |
|
|
| T |
33642809 |
gtatcaaatcagttgccatgttacgattgcatatttgatggtgttctatgccaagagtttgaaataggatttgcttttgtgcttcgagtggaccatcatg |
33642710 |
T |
|
| Q |
510 |
tgatctataaattttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttg |
572 |
Q |
| |
|
| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
33642709 |
taatctataaattttgcttacatcatcaataaaacatgatgcactaaatcgatgagatatttg |
33642647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 9 - 572
Target Start/End: Original strand, 33389544 - 33390107
Alignment:
| Q |
9 |
gacatcatcatctggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagt |
108 |
Q |
| |
|
|||||| | |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
33389544 |
gacatcgttatctggcctttctctcaatctagccaatgcactcttccattcagtcacattacgaccaaacaaaaatgagcccaatactttaattgctagt |
33389643 |
T |
|
| Q |
109 |
ggtagacctttagcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgt |
208 |
Q |
| |
|
|| ||||| ||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||| ||| |
|
|
| T |
33389644 |
ggaagaccattagcataactcagtatctcaaaatccaaattttggtaactactcataataattttctcatgtttgaaagctttttgacaaaataacttgt |
33389743 |
T |
|
| Q |
209 |
gagactcggcctgattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccc |
308 |
Q |
| |
|
|||| |||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
33389744 |
gagaatcggtccgattcaaaagtggaactttgtaaactacgtccactccatactctttcaatatatgctcatctctagaaatgataattattctactacc |
33389843 |
T |
|
| Q |
309 |
tgcacctaaccattcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttctt |
408 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||||| ||||||| || |||| |||||||||||||||| |||| | ||| ||||| |||||| | | |
|
|
| T |
33389844 |
tgcacctaaccactcacgatgcacagctattttttccgattgttcaccttgatccacattatcaagaatcactagggtcttttcacgacttagcctacgt |
33389943 |
T |
|
| Q |
409 |
catatcaaattagtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcat |
508 |
Q |
| |
|
| |||||||| ||| || ||||| ||||||||||||||||||| | |||| | | |||||||| ||| |||||||||||| |||| | ||||||||| |
|
|
| T |
33389944 |
cgtatcaaatcagttgcaatgtaacgattgcatatttgatggtgttttatgtcgagagtttgaaatagaatttgcttttgtgcatccaaaggaccatcac |
33390043 |
T |
|
| Q |
509 |
atgatctataaattttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttg |
572 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
33390044 |
ataatctatatattttgcttacatcatcaataaaacaatttgcactaaatcgatgagatatttg |
33390107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 20 - 572
Target Start/End: Original strand, 33059046 - 33059598
Alignment:
| Q |
20 |
ctggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtggtagaccttt |
119 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
33059046 |
ctggactttgtctcaatctagtcaatgcactcttccattcagtcacattacgaccaaacaaaaacgagcccaatactttaattgctagtggtagaccttt |
33059145 |
T |
|
| Q |
120 |
agcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgtgagactcggcc |
219 |
Q |
| |
|
|||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |
|
|
| T |
33059146 |
agcataatgtagtatctgatctaccaaattttgataattactcataataattttctcatctttgaaagcttttcgacaaaataacatgtgagcttcattc |
33059245 |
T |
|
| Q |
220 |
tgattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaacc |
319 |
Q |
| |
|
|| ||| |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
33059246 |
caatccaatagtgaaactttgtaaactacatccactccatacgctttcaatacatgctcatctctagaaatgataataattctactacctggacctaacc |
33059345 |
T |
|
| Q |
320 |
attcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttcttcatatcaaatt |
419 |
Q |
| |
|
||||||||||||| ||||||| |||| |||||||||| | || |||||||||||||||| ||||| |||| | |||||||| | ||| ||||||| | |
|
|
| T |
33059346 |
attcacgatgcaccgctattttctccaattgttcaacttggtccacattatcaagaatcataagggttctttcatgacatagcttcctttgtatcaaagt |
33059445 |
T |
|
| Q |
420 |
agtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcatatgatctataa |
519 |
Q |
| |
|
||| || |||| ||||||||||||| ||||| |||||||| | |||||||| ||||||||| |||||||||||||| ||| |||||| | ||| |||| |
|
|
| T |
33059446 |
agttgcatggtaacgattgcatatttgttggtgttctatgccgagagtttgaaataggatttgtttttgtacatcgagtggatcatcatgtaatccataa |
33059545 |
T |
|
| Q |
520 |
attttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttg |
572 |
Q |
| |
|
|||||| ||||||| |||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
33059546 |
attttggttacatcgtcaataaaacaagatgcactaaattgatgagatatttg |
33059598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 9 - 564
Target Start/End: Original strand, 33264121 - 33264676
Alignment:
| Q |
9 |
gacatcatcatctggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagt |
108 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||||| |
|
|
| T |
33264121 |
gacatcattatctggactttctctcaaactagccaatgtactcttccattcagtcacattacgaccaaacaaatatgaacccaatactttaattgctagt |
33264220 |
T |
|
| Q |
109 |
ggtagacctttagcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgt |
208 |
Q |
| |
|
|||||||| |||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| |
|
|
| T |
33264221 |
ggtagaccattagcatatctcaatatctcatttgccaaatttttataattactcataataattttctcagctttgaaagcttttctacaaaataacttgt |
33264320 |
T |
|
| Q |
209 |
gagactcggcctgattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccc |
308 |
Q |
| |
|
||| |||||| ||||| |||||| ||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||| |||||||| || |
|
|
| T |
33264321 |
gagcttcggcccaattcagaagtgggactttgtaaactacatccactttatattctttcaatatatgttcatctcttgaaatgataacgattctactacc |
33264420 |
T |
|
| Q |
309 |
tgcacctaaccattcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttctt |
408 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||| |||||||||| |||| |||||||||||||| ||||||| | ||| ||||| |||||| || |
|
|
| T |
33264421 |
tgcacctaaccattcacgatgcacacctattctttccaattgttcaacttgatccacattatcaagaattagaagggtcttttcacgacttagcctattt |
33264520 |
T |
|
| Q |
409 |
catatcaaattagtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcat |
508 |
Q |
| |
|
| |||||||| ||| || || ||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||| | |||||||||| |
|
|
| T |
33264521 |
cttatcaaatcagttgcactataatgattgcatatttgatggtgttctatgccaagagtttgatgtaggatttgcttttgtgcatctattggaccatcat |
33264620 |
T |
|
| Q |
509 |
atgatctataaattttgcttacatcatcaatataacaagatgcactaaatcgatga |
564 |
Q |
| |
|
| ||||| |||||||||||||||||||||| |||| |||||| |||||||||| |
|
|
| T |
33264621 |
gtaatctaaaaattttgcttacatcatcaatgaaacaggatgcatcaaatcgatga |
33264676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 9 - 574
Target Start/End: Original strand, 33287014 - 33287579
Alignment:
| Q |
9 |
gacatcatcatctggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagt |
108 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
33287014 |
gacatcattatctggactttctcttaatctagtcaatgcactcttccattccgtcacattacgaccaaacaaaaatgagcccaatactttaattgctaac |
33287113 |
T |
|
| Q |
109 |
ggtagacctttagcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgt |
208 |
Q |
| |
|
|||||||| |||||||||| ||||||||||| | ||||| ||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
33287114 |
ggtagaccattagcataatccagtatctcatataccaaactttcataatttctcataataattttctcttctttgaaagcttttcgacaaaataacatgt |
33287213 |
T |
|
| Q |
209 |
gagactcggcctgattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccc |
308 |
Q |
| |
|
||| || | || ||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
33287214 |
gagcttcattccaatccaagagtggaactttgtagactacatccactccatactcttccaatatatgctcatctctagaaatgataataattctactacc |
33287313 |
T |
|
| Q |
309 |
tgcacctaaccattcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttctt |
408 |
Q |
| |
|
| | ||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| ||| |
|
|
| T |
33287314 |
tacgcctaaacattcacgatgcacacctattttttccaattgttcaactcgatctacattatcaagaataagaagggccctttcacgacgtagcctactt |
33287413 |
T |
|
| Q |
409 |
catatcaaattagtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcat |
508 |
Q |
| |
|
|||||||||||| || | || | |||||||||| ||||||| ||||| || || |||||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
33287414 |
tgtatcaaattagttgcacggtgacgattgcatatatgatggtcttctattccgacggtttgaagtaggatttccttttgtgcatcgaggggaccatcat |
33287513 |
T |
|
| Q |
509 |
atgatctataaattttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttgat |
574 |
Q |
| |
|
| ||||| | ||||| ||||| |||||| |||||||| ||||||||||||| |||||||||| |
|
|
| T |
33287514 |
gtaatctaaattttttggcaacatcttcaataaaacaagatccactaaatcgatgggatatttgat |
33287579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 313 - 572
Target Start/End: Complemental strand, 31567432 - 31567173
Alignment:
| Q |
313 |
cctaaccattcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttcttcata |
412 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
31567432 |
cctaaccattcacgacgcacaactattttttccatttgttcaacttgatctacattttcaagaatcagaagggccctttcacgacatagccttcttcgta |
31567333 |
T |
|
| Q |
413 |
tcaaattagtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcatatga |
512 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
31567332 |
tcaaattagtggcgctgtaatgattgcatatttgttggtgatctatgccaacagtttgaagtaggatttgcttttgtgcatcgaggggaccatcatatga |
31567233 |
T |
|
| Q |
513 |
tctataaattttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttg |
572 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31567232 |
tctataaattttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttg |
31567173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 28869379 - 28869210
Alignment:
| Q |
9 |
gacatcatcatctggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagt |
108 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| |||||||||||| |
|
|
| T |
28869379 |
gacatcattatctggactttctctcaatctagccaatgcactcttccattcagtcacattacgaccaaacaaatatgagtacaatattgtaattgctagc |
28869280 |
T |
|
| Q |
109 |
ggtagacctttagcataattcagtatctcatctgccaaattttgataattactcataataattttctcaa |
178 |
Q |
| |
|
||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| |||| ||| |||| |
|
|
| T |
28869279 |
ggtagacctttagcataatccagtatcacatttgccaaattttgataattactcatgataactttttcaa |
28869210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 374 - 572
Target Start/End: Original strand, 33359916 - 33360114
Alignment:
| Q |
374 |
gaatcagaagggcccttttacgacatagccttcttcatatcaaattagtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaag |
473 |
Q |
| |
|
|||||| |||||| |||| | |||||||||| ||| ||||||| |||| || |||| || |||||||| || ||| ||||||| | |||||||| |
|
|
| T |
33359916 |
gaatcaaaagggctctttcatgacatagcctcctttgtatcaaagtagttgcatggtaacaatcgcatattttattgtgttctatgctgagagtttgaaa |
33360015 |
T |
|
| Q |
474 |
taggatttgcttttgtacatcgaggggaccatcatatgatctataaattttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttg |
572 |
Q |
| |
|
|||||||| ||||||| ||||||| ||| ||||| | ||| |||||||| |||||||||||||| || |||||||||||||| | ||||| ||||| |
|
|
| T |
33360016 |
taggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagttacatcatcaataaaaaaagatgcactaaattggtgagagatttg |
33360114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 13609719 - 13609637
Alignment:
| Q |
28 |
tctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtgg |
110 |
Q |
| |
|
||||| ||||| ||||||||||| ||||||||| | || |||||| |||||||||||||||| ||| |||||||||||| |
|
|
| T |
13609719 |
tctcttaatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg |
13609637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 316
Target Start/End: Complemental strand, 13609502 - 13609434
Alignment:
| Q |
248 |
catccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcaccta |
316 |
Q |
| |
|
|||| ||||||| |||| |||| ||||| ||||||||||||| | |||||||||||||||| ||||| |
|
|
| T |
13609502 |
catctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaaccta |
13609434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 9 - 572
Target Start/End: Complemental strand, 17439436 - 17438873
Alignment:
| Q |
9 |
gacatcatcatctggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagt |
108 |
Q |
| |
|
|||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
17439436 |
gacatctttatctggactctctctcaatctagccaatgcactcttccattcagtcacattacaaccaaacaaaaatgagcccattactttaattgctagt |
17439337 |
T |
|
| Q |
109 |
ggtagacctttagcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgt |
208 |
Q |
| |
|
|||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
17439336 |
ggtagaccattagcatatctcagtatctcatttgccaaattttgataattactcataataatgttctcaactttgaaagcttttcgacaaaataacttgt |
17439237 |
T |
|
| Q |
209 |
gagactcggcctgattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccc |
308 |
Q |
| |
|
||| || | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
17439236 |
aagaatctctccaattcaaaagtggaactttgtaaactacatccactccatactttttcaatatatgctcatctctagaaatgataatgattctactacc |
17439137 |
T |
|
| Q |
309 |
tgcacctaaccattcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttctt |
408 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||| |||||||||| |||| |||||||||||||||||||| ||||||| | ||||||| || |
|
|
| T |
17439136 |
tgcacctaaccattcaagatgcacatctattttttccaattgttcaacttgatccacattatcaagaatcagaagtgccctttcatgacatagtctatgc |
17439037 |
T |
|
| Q |
409 |
catatcaaattagtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcat |
508 |
Q |
| |
|
| |||||||| || || |||||| ||||||||||||||||||| |||||||||| |||||||| || ||||||||||||| | || || |||||||||| |
|
|
| T |
17439036 |
cgtatcaaatatgttgcactgtaacgattgcatatttgatggtgttctatgccaagagtttgaaatatgatttgcttttgtgcttcaagtggaccatcat |
17438937 |
T |
|
| Q |
509 |
atgatctataaattttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttg |
572 |
Q |
| |
|
| |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |
|
|
| T |
17438936 |
gtaatctataaattttgcttacatcatcaatgaaacaagatgcatcaaatcgatgagagatttg |
17438873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 21 - 564
Target Start/End: Original strand, 8244 - 8787
Alignment:
| Q |
21 |
tggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtggtagaccttta |
120 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
8244 |
tggactttgtctcagtctagccaatgcactcttccattcagtcacattacgaccagacaaaaatgagcccaatactgtaattgctagtggtagaccatta |
8343 |
T |
|
| Q |
121 |
gcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgtgagactcggcct |
220 |
Q |
| |
|
|| |||||||||||||||| |||||||||||||||||| |||| ||||||||||||| ||||||||||||| ||||||||||| |||||||||||| | |
|
|
| T |
8344 |
gcgtaattcagtatctcatatgccaaattttgataatttttcatgataattttctcaagtttgaaagctttttgacaaaataacttgtgagactcggtcc |
8443 |
T |
|
| Q |
221 |
gattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaacca |
320 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||| |||||||| |||||||||||||| |
|
|
| T |
8444 |
aatccaacagtggaactttgtaaactacatccactttatattctttcaatatatgttcatctcttgaaatgataacgattctactacctgcacctaacca |
8543 |
T |
|
| Q |
321 |
ttcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttcttcatatcaaatta |
420 |
Q |
| |
|
||||||||||||| ||||| |||||| |||||||||| |||| |||||||||||||| ||||||| | ||| ||||| |||||| || |||||||| | |
|
|
| T |
8544 |
ttcacgatgcacacctattctttccaattgttcaacttgatccacattatcaagaattagaagggtcttttcacgacttagcctatgtcttatcaaatca |
8643 |
T |
|
| Q |
421 |
gtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcatatgatctataaa |
520 |
Q |
| |
|
|| || || ||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||| | |||||||||| | ||||| ||| |
|
|
| T |
8644 |
gttgcactataatgattgcatatttgatggtgttctatgccaagagtttgatgtaggatttgcttttgtgcatcaattggaccatcatgtaatctaaaaa |
8743 |
T |
|
| Q |
521 |
ttttgcttacatcatcaatataacaagatgcactaaatcgatga |
564 |
Q |
| |
|
||||||||||||||||||| |||| |||||| |||||||||| |
|
|
| T |
8744 |
ttttgcttacatcatcaatgaaacaggatgcatcaaatcgatga |
8787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 125; Significance: 4e-64; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 21 - 387
Target Start/End: Original strand, 31149826 - 31150189
Alignment:
| Q |
21 |
tggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtggtagaccttta |
120 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||||| | ||| ||| || ||||||| ||||| |||||| |||||||||| ||||| || ||| |
|
|
| T |
31149826 |
tggactttctctcaatcttgccaatgcacttttccattcaaaaatatttcgatcatacaaaaacgagcctaatactttaattgctagaggtaggccatta |
31149925 |
T |
|
| Q |
121 |
gcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgtgagactcggcct |
220 |
Q |
| |
|
||||| | ||||||||| |||||| || | |||| ||||||||||| | |||| ||||||||||||||||| |||||| |||| || | | |
|
|
| T |
31149926 |
gcataccttagtatctcagatgccaacttatcataactactcataata---tgatcaagtttgaaagcttttcgactaaataattgaagagagtcagtcc |
31150022 |
T |
|
| Q |
221 |
gattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaacca |
320 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| ||||||||||| |
|
|
| T |
31150023 |
gattcaggagtggaactttgtaaacaacatccactccatactctttcaagatatgctcgtctctagaaattataatgattctactccccgcacctaacca |
31150122 |
T |
|
| Q |
321 |
ttcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcc |
387 |
Q |
| |
|
|||||||| ||| ||| ||| || | |||||||||| |||| ||||| |||||||| | ||||||| |
|
|
| T |
31150123 |
ttcacgattcacggctaatttctcgagttgttcaacttgatcaacattgtcaagaattataagggcc |
31150189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 19 - 566
Target Start/End: Complemental strand, 31477569 - 31477025
Alignment:
| Q |
19 |
tctggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtggtagacctt |
118 |
Q |
| |
|
|||||||||||| | | ||||||||||||||| ||||||||| | || ||||||||||||||||| ||||||||| ||||||| |||||||| || | |
|
|
| T |
31477569 |
tctggactttctttgagtctagccaatgcacttctccattcagatatatcccgaccaaacaaaaatgaacccaatactttaattgcaagtggtaggccat |
31477470 |
T |
|
| Q |
119 |
tagcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgtgagactcggc |
218 |
Q |
| |
|
| ||||||| ||||| ||| |||| || |||| || ||| |||| | |||| |||||||||||||||||| ||||| |||| | | |
|
|
| T |
31477469 |
tggcataatgtagtatgccattaaccaacccttcataactattcaaaata---tgatcaagtttgaaagcttttcgacacaataattgaagagagttagt |
31477373 |
T |
|
| Q |
219 |
ctgattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaac |
318 |
Q |
| |
|
| || ||| || ||||||||||||||| |||| |||||||| | |||||||||||||||||||||||||| ||||| ||| |||| || |||||| | |
|
|
| T |
31477372 |
ccaatccaagagaggaactttgtaaacttcatctactccataattcttcaatatatgctcatctctagaaattataatgattttacttccctcacctagc |
31477273 |
T |
|
| Q |
319 |
cattcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttcttcatatcaaat |
418 |
Q |
| |
|
||||||||| ||| |||||||||||| |||||||||| ||| |||||||||| ||||| |||| |||||| ||||||||| || | || ||||| | |
|
|
| T |
31477272 |
cattcacgacaaacacctattttttccagttgttcaactttatcaacattatcaaaaatcataaggaccctttgacgacatagtctacgtctaatcaagt |
31477173 |
T |
|
| Q |
419 |
tagtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcatatgatctata |
518 |
Q |
| |
|
||| || || || |||||||||| |||| ||||| | || | ||||||| |||| ||||||||||| |||||||| || ||||||| | ||||| | |
|
|
| T |
31477172 |
tagatgcagtggaaagattgcatatctgattgtgattttcaccgagagtttgatgtagaatttgcttttgaacatcgagtggcccatcatgtaatctaaa |
31477073 |
T |
|
| Q |
519 |
aattttgcttacatcatcaatataacaagatgcactaaatcgatgaga |
566 |
Q |
| |
|
||||||||||||||||||||| |||| |||||| |||| ||||||| |
|
|
| T |
31477072 |
cattttgcttacatcatcaataaaacagcatgcaccaaattgatgaga |
31477025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 21 - 373
Target Start/End: Original strand, 31158727 - 31159076
Alignment:
| Q |
21 |
tggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtggtagaccttta |
120 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||| | | ||||||||||||||||| ||||||||| |||||||||| |||||||| ||| |
|
|
| T |
31158727 |
tggacttttgctcaatctagccaatgcacttttccattcatagatgtctcgaccaaacaaaaatgatcccaatactttaattgctagcggtagaccatta |
31158826 |
T |
|
| Q |
121 |
gcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgtgagactcggcct |
220 |
Q |
| |
|
|||||| | ||||| ||| || ||| || | | || ||||||||||| | |||| ||||||||||||| ||||||| || |||| | | | |
|
|
| T |
31158827 |
gcataactgagtatgtcaaatgtcaacttatcaaaactactcataata---tgatcaagtttgaaagctttttgacaaaacaattgaagagagttagtcc |
31158923 |
T |
|
| Q |
221 |
gattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaacca |
320 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||| || |
|
|
| T |
31158924 |
cattcaagagtggaactttgtaaactacatcaactccatactctttcaagatatgttcatctctagaaattataacgattctactccctgcacctaagca |
31159023 |
T |
|
| Q |
321 |
ttcacgatgcacaactattttttccatttgttcaactcgatctacattatcaa |
373 |
Q |
| |
|
|||||||| |||| ||| ||| || | |||||||||| ||| |||||||||| |
|
|
| T |
31159024 |
ttcacgattcacagctaatttatcaagttgttcaactttatcaacattatcaa |
31159076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 21 - 545
Target Start/End: Complemental strand, 31497520 - 31496999
Alignment:
| Q |
21 |
tggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtggtagaccttta |
120 |
Q |
| |
|
||||||||||||||||||| |||||||||| | ||||||| | | || ||| ||||||||||||| ||||||||| ||||||| |||||||| || || |
|
|
| T |
31497520 |
tggactttctctcaatctaaccaatgcactttcccattcaattatatcccgatcaaacaaaaatgaacccaatactttaattgccagtggtaggccattg |
31497421 |
T |
|
| Q |
121 |
gcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgtgagactcggcct |
220 |
Q |
| |
|
|||||| ||||| ||| | || || |||| ||||| |||| | |||| |||||||||||||||||| ||||| |||| | | | |
|
|
| T |
31497420 |
acataatgcagtacgccattaactaacccttcataaccactcaaaata---tgatcaattttgaaagcttttcgacataataatcgtcgagagttagtcc |
31497324 |
T |
|
| Q |
221 |
gattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaacca |
320 |
Q |
| |
|
|| |||||| |||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| |||| || || ||||||| |
|
|
| T |
31497323 |
aatccaaaagaggaactttgtaaacctcatccactccatactctttcagtatatgctcgtctctagaaatgataatgattttactacccacatctaacca |
31497224 |
T |
|
| Q |
321 |
ttcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttcttcatatcaaatta |
420 |
Q |
| |
|
|||||| | |||||||||||||| | |||||||||| ||| |||||||||| ||||| |||| |||| || ||||||||| | || |||||| ||| |
|
|
| T |
31497223 |
atcacgacgaacaactattttttctaattgttcaactttatcaacattatcaaaaatcaaaaggatactttgacaacatagcctgcgtcgtatcaagtta |
31497124 |
T |
|
| Q |
421 |
gtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcatatgatctataaa |
520 |
Q |
| |
|
| ||| ||| | |||||||||| |||||||| ||| | ||||||| |||| ||||||||||| |||| ||| || ||||||| | ||||| ||| |
|
|
| T |
31497123 |
gatgcgatgtgaagattgcatatatgatggtgttcttcattgagagtttgatgtagaatttgcttttgaacattgagtggtccatcatgtaatctaaaaa |
31497024 |
T |
|
| Q |
521 |
ttttgcttacatcatcaatataaca |
545 |
Q |
| |
|
|||||||||||||||||||| |||| |
|
|
| T |
31497023 |
ttttgcttacatcatcaataaaaca |
31496999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 21 - 328
Target Start/End: Original strand, 31019278 - 31019582
Alignment:
| Q |
21 |
tggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtggtagaccttta |
120 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||||| | | || ||||||||||||||||||||||||||| |||||||||||||||| || || |
|
|
| T |
31019278 |
tggactttctttcaatctagccaatgcacttctccattcggagatatctcgaccaaacaaaaatgagcccaatactttaattgctagtggtaggccattg |
31019377 |
T |
|
| Q |
121 |
gcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgtgagactcggcct |
220 |
Q |
| |
|
|||||| || | ||| ||||| || | |||| |||||||||| | |||| ||||||||||||| |||||||||| |||| | || || |
|
|
| T |
31019378 |
gcataagatagcgtgtcaagtgccagtttatcataaccactcataata---tgatcaagtttgaaagctttttgacaaaataattgaagagagttggtct |
31019474 |
T |
|
| Q |
221 |
gattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaacca |
320 |
Q |
| |
|
|||||| |||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||| ||||| |||||||||||| ||||||| || |
|
|
| T |
31019475 |
cattcaagagtggaactttgtaaacttcatcaactccatactcattcaagatatgctcatctctagaaattataatgattctactccctacacctaaaca |
31019574 |
T |
|
| Q |
321 |
ttcacgat |
328 |
Q |
| |
|
|||||||| |
|
|
| T |
31019575 |
ttcacgat |
31019582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 21 - 328
Target Start/End: Original strand, 31029159 - 31029463
Alignment:
| Q |
21 |
tggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtggtagaccttta |
120 |
Q |
| |
|
||||| ||||||||||||||||||| ||| ||||||||| | || ||||||||||||||||||||||||||| |||| ||||||||||| || || |
|
|
| T |
31029159 |
tggacattctctcaatctagccaatttacttctccattcagagatatctcgaccaaacaaaaatgagcccaatactttaatagctagtggtaggccattg |
31029258 |
T |
|
| Q |
121 |
gcataattcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgtgagactcggcct |
220 |
Q |
| |
|
|||||| ||| | ||| ||||| || | |||| |||||||| | | ||||| ||||||||||||| |||||||||| |||| | || || |
|
|
| T |
31029259 |
gcataagatagtgtgtcaagtgccattttatcataaccactcataaca---tgctcaagtttgaaagctttttgacaaaataattgaagagagttggtct |
31029355 |
T |
|
| Q |
221 |
gattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaacca |
320 |
Q |
| |
|
|||||| |||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||||||||| | |
|
|
| T |
31029356 |
cattcaagagtggaactttgtaaacttcatcaactccatactcattcaagatatgctcatctctagaaattataatgattctactccctgcacctaaata |
31029455 |
T |
|
| Q |
321 |
ttcacgat |
328 |
Q |
| |
|
|||||||| |
|
|
| T |
31029456 |
ttcacgat |
31029463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 225 - 566
Target Start/End: Complemental strand, 31502491 - 31502147
Alignment:
| Q |
225 |
caaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaaccattca |
324 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| ||||| ||| |||| || |||||||||||||| |
|
|
| T |
31502491 |
caaaagaggaactttgtaaacttcatccactccaaaaaatttcaatatatgctcatctctagaaattataatgattttactacc-ccacctaaccattca |
31502393 |
T |
|
| Q |
325 |
c----gatgcacaactattttttccatttgttcaactcgatctacattatcaagaatcagaagggcccttttacgacatagccttcttcatatcaaatta |
420 |
Q |
| |
|
| | |||| |||||||||||| |||||||||| ||| |||||||||| ||||| |||| |||||| |||||||||||| | || ||||| ||| |
|
|
| T |
31502392 |
ccacacacacacacctattttttccagttgttcaactttatcaacattatcaaaaatcaaaaggaccctttgacgacatagcctgcgtcgaatcaagtta |
31502293 |
T |
|
| Q |
421 |
gtggcgctgtaatgattgcatatttgatggtgatctatgccaacagtttgaagtaggatttgcttttgtacatcgaggggaccatcatatgatctataaa |
520 |
Q |
| |
|
| || | || ||||||||||||||| ||| ||| || |||||| ||| ||||||||||| ||| | || || ||||||| | ||||| | | |
|
|
| T |
31502292 |
gatgcagtagaaagattgcatatttgattgtgttcttcaccgtgtgtttgatatagtatttgcttttgaacaccaagtggtccatcatgtaatctaaaca |
31502193 |
T |
|
| Q |
521 |
ttttgcttacatcatcaatataacaagatgcactaaatcgatgaga |
566 |
Q |
| |
|
|||||||||||||||| ||| ||||| |||||| |||| ||||||| |
|
|
| T |
31502192 |
ttttgcttacatcatcgataaaacaacatgcaccaaattgatgaga |
31502147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 222 - 333
Target Start/End: Complemental strand, 31490070 - 31489959
Alignment:
| Q |
222 |
attcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaaccat |
321 |
Q |
| |
|
|||||| ||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||||| |||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
31490070 |
attcaagagtggaactctgtaaactacatcaactccatactctttcaagatatgttcatctccagaaattataatgattctactccctgcacctaaccat |
31489971 |
T |
|
| Q |
322 |
tcacgatgcaca |
333 |
Q |
| |
|
||||||| |||| |
|
|
| T |
31489970 |
tcacgattcaca |
31489959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 28 - 318
Target Start/End: Original strand, 31527894 - 31528181
Alignment:
| Q |
28 |
tctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtggtagacctttagcataat |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||||||| | || |||||||||||||||||||||||| || |||| |||||||||| || |||||||||| |
|
|
| T |
31527894 |
tctctcaatctagtcaatgcacttctccattcataaatatctcgaccaaacaaaaatgagcccaatgctttaatcgctagtggtaagccattagcataat |
31527993 |
T |
|
| Q |
128 |
tcagtatctcatctgccaaattttgataattactcataataattttctcaactttgaaagcttttcgacaaaataacatgtgagactcggcctgattcaa |
227 |
Q |
| |
|
| |||||||||| | |||| | | ||||||||||| |||| || ||| ||||||||||| | | |||||||| |||| | | |||||||| |
|
|
| T |
31527994 |
ttagtatctcatataccaactcgtcataattactcaaaata---ttatcacgtttgaaagcttgttggcaaaataattgaagagaattagtttgattcaa |
31528090 |
T |
|
| Q |
228 |
aagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaac |
318 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||| ||||| |||||| ||||| ||||| ||||||||||| |||||||| |
|
|
| T |
31528091 |
gagtggaactttgaaaactacatccactccatacctattcaagatatgagtatctctcgaaattataatgattctactcccaacacctaac |
31528181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 222 - 377
Target Start/End: Original strand, 31161332 - 31161485
Alignment:
| Q |
222 |
attcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaaccat |
321 |
Q |
| |
|
|||||| | |||||||||||| || |||||||| || || ||||||| ||||||||||||||| || | ||||| ||||||||||| |||| ||||||| |
|
|
| T |
31161332 |
attcaacaatggaactttgtagacaacatccacaacaaacactttcaagatatgctcatctctaaaagttataatgattctactccccgcacataaccat |
31161431 |
T |
|
| Q |
322 |
tcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaat |
377 |
Q |
| |
|
||| || | || ||| |||||| | |||||||||| |||| ||||| |||||||| |
|
|
| T |
31161432 |
tcatga--ctcagctagtttttcgagttgttcaacttgatcaacattgtcaagaat |
31161485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 259 - 386
Target Start/End: Original strand, 31033694 - 31033821
Alignment:
| Q |
259 |
tactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaaccattcacgatgcacaactattttttccatttgttcaactc |
358 |
Q |
| |
|
||||||||||| ||||| ||||||||||| | |||| |||||||||||| |||||||| ||||||| | |||| ||| ||| ||| ||||||||| |
|
|
| T |
31033694 |
tactctttcaagatatgaacatctctagaagttataacaattctactcccagcacctaaacattcactactcacagctaatttctcctgctgttcaactt |
31033793 |
T |
|
| Q |
359 |
gatctacattatcaagaatcagaagggc |
386 |
Q |
| |
|
|||| ||||||||||||| |||||||| |
|
|
| T |
31033794 |
gatcaacattatcaagaactagaagggc |
31033821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 31033495 - 31033586
Alignment:
| Q |
21 |
tggactttctctcaatctagccaatgcactcttccattcagtcaaattacgaccaaacaaaaatgagcccaatactgtaattgctagtggtag |
113 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||| | ||| |||||| || ||||||||||||||||| ||||||| ||||||| |
|
|
| T |
31033495 |
tggattttctctcaatctagccaatgcacttgtccattcagagatatttcgaccacac-aaaatgagcccaatactttaattgccggtggtag |
31033586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 220 - 376
Target Start/End: Complemental strand, 31245479 - 31245323
Alignment:
| Q |
220 |
tgattcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaacc |
319 |
Q |
| |
|
|||| ||| ||| |||||||||| ||| |||| ||||||| |||| |||| ||||| ||||||||||||| || || ||||||||||||| |||| || |
|
|
| T |
31245479 |
tgatccaagagtcgaactttgtacacttcatctactccatgctctctcaagatatgaacatctctagaaattatgatgattctactccctgtgcctagcc |
31245380 |
T |
|
| Q |
320 |
attcacgatgcacaactattttttccatttgttcaactcgatctacattatcaagaa |
376 |
Q |
| |
|
|||| || || | | | ||| |||| |||||||||| |||| ||||||||||||| |
|
|
| T |
31245379 |
attctcgtgtcatagccaatttatccagttgttcaacttgatcaacattatcaagaa |
31245323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 317
Target Start/End: Complemental strand, 31483223 - 31483128
Alignment:
| Q |
222 |
attcaaaagtggaactttgtaaactacatccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcacctaa |
317 |
Q |
| |
|
|||||| | |||||||||||||| | | |||||||||||||||| ||| ||||| |||||||| ||| ||||| ||||| ||||||||| |||| |
|
|
| T |
31483223 |
attcaagaatggaactttgtaaagtgcgtccactccatactcttccaagatatgagcatctctacaaactataatgattctgctccctgcagctaa |
31483128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 31161187 - 31161238
Alignment:
| Q |
74 |
caaacaaaaatgagcccaatactgtaattgctagtggtagacctttagcata |
125 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||||||| || |||||||| |
|
|
| T |
31161187 |
caaacaaaaaagagcccaatactttaattgctagtggtaagccattagcata |
31161238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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