View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2619_low_2 (Length: 425)

Name: NF2619_low_2
Description: NF2619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2619_low_2
NF2619_low_2
[»] scaffold0291 (1 HSPs)
scaffold0291 (228-405)||(7883-8060)
[»] chr7 (46 HSPs)
chr7 (229-405)||(30055498-30055675)
chr7 (230-405)||(18797302-18797475)
chr7 (232-405)||(37109847-37110020)
chr7 (230-405)||(17842599-17842774)
chr7 (232-405)||(27283719-27283892)
chr7 (228-405)||(38258516-38258693)
chr7 (231-405)||(31579077-31579256)
chr7 (232-405)||(7334769-7334942)
chr7 (233-403)||(24211717-24211887)
chr7 (232-411)||(5657488-5657667)
chr7 (232-403)||(37346997-37347168)
chr7 (229-402)||(12390646-12390819)
chr7 (230-403)||(10481576-10481751)
chr7 (226-405)||(21991605-21991784)
chr7 (225-403)||(31520739-31520916)
chr7 (230-405)||(32821066-32821241)
chr7 (233-403)||(33688277-33688446)
chr7 (234-403)||(44413394-44413564)
chr7 (234-402)||(23111167-23111335)
chr7 (257-405)||(29173540-29173688)
chr7 (233-405)||(48928577-48928748)
chr7 (246-405)||(22687228-22687387)
chr7 (234-405)||(27421393-27421563)
chr7 (230-401)||(41765095-41765266)
chr7 (231-405)||(43686015-43686188)
chr7 (232-411)||(4582894-4583073)
chr7 (230-405)||(9355839-9356014)
chr7 (227-405)||(8861255-8861433)
chr7 (232-405)||(6546494-6546667)
chr7 (232-405)||(15612772-15612944)
chr7 (259-402)||(26980325-26980468)
chr7 (231-405)||(32432431-32432600)
chr7 (256-405)||(48928310-48928458)
chr7 (234-405)||(11071182-11071354)
chr7 (230-381)||(26524364-26524515)
chr7 (232-402)||(12165727-12165897)
chr7 (234-405)||(25691557-25691729)
chr7 (272-403)||(38053501-38053624)
chr7 (232-403)||(10359229-10359400)
chr7 (232-405)||(37704143-37704305)
chr7 (350-405)||(15672775-15672830)
chr7 (232-362)||(34362205-34362334)
chr7 (336-402)||(44598745-44598811)
chr7 (322-403)||(43925167-43925247)
chr7 (279-403)||(32593204-32593327)
chr7 (365-403)||(37703513-37703551)
[»] chr4 (54 HSPs)
chr4 (232-405)||(19089491-19089664)
chr4 (231-405)||(37663779-37663951)
chr4 (222-405)||(25701095-25701278)
chr4 (231-405)||(25184112-25184286)
chr4 (231-405)||(879586-879760)
chr4 (230-405)||(55477929-55478108)
chr4 (230-403)||(34361532-34361704)
chr4 (232-403)||(19440688-19440860)
chr4 (231-403)||(42199728-42199900)
chr4 (234-405)||(34948135-34948306)
chr4 (230-403)||(32912620-32912793)
chr4 (234-405)||(17173292-17173463)
chr4 (232-405)||(28003024-28003197)
chr4 (222-402)||(29584241-29584419)
chr4 (234-403)||(36493728-36493897)
chr4 (234-405)||(17167715-17167886)
chr4 (229-405)||(50764732-50764903)
chr4 (228-405)||(50697238-50697414)
chr4 (234-402)||(27396618-27396786)
chr4 (223-405)||(4597984-4598165)
chr4 (230-405)||(9139245-9139418)
chr4 (229-405)||(35021073-35021249)
chr4 (274-403)||(23761114-23761243)
chr4 (229-402)||(38011851-38012024)
chr4 (232-402)||(49375966-49376137)
chr4 (235-403)||(6864038-6864206)
chr4 (235-405)||(32592096-32592266)
chr4 (221-403)||(3042600-3042790)
chr4 (232-405)||(39397918-39398082)
chr4 (257-400)||(54499281-54499425)
chr4 (270-405)||(46888195-46888330)
chr4 (232-403)||(55241145-55241315)
chr4 (293-402)||(4934243-4934353)
chr4 (246-405)||(5048003-5048162)
chr4 (227-405)||(32579439-32579619)
chr4 (231-360)||(37287732-37287862)
chr4 (233-402)||(37775670-37775837)
chr4 (234-405)||(47253751-47253913)
chr4 (232-402)||(7703517-7703679)
chr4 (227-405)||(30002670-30002840)
chr4 (234-405)||(33341397-33341571)
chr4 (229-334)||(4205113-4205218)
chr4 (230-316)||(4396324-4396410)
chr4 (234-405)||(33816571-33816742)
chr4 (340-405)||(1815409-1815474)
chr4 (232-316)||(53124287-53124371)
chr4 (231-362)||(35025669-35025800)
chr4 (234-290)||(52516599-52516655)
chr4 (230-296)||(17272009-17272075)
chr4 (352-402)||(17272084-17272134)
chr4 (230-314)||(7152235-7152319)
chr4 (238-280)||(52195645-52195687)
chr4 (273-321)||(23518425-23518473)
chr4 (232-280)||(52102915-52102963)
[»] chr1 (53 HSPs)
chr1 (222-405)||(32267020-32267203)
chr1 (230-405)||(15382927-15383102)
chr1 (242-403)||(28564790-28564951)
chr1 (233-403)||(10922724-10922894)
chr1 (231-405)||(18422646-18422820)
chr1 (231-405)||(30254419-30254592)
chr1 (234-405)||(15752027-15752198)
chr1 (229-405)||(37618899-37619079)
chr1 (231-405)||(2959743-2959917)
chr1 (258-403)||(9903063-9903208)
chr1 (231-403)||(19899778-19899950)
chr1 (230-405)||(16415639-16415815)
chr1 (229-404)||(34012385-34012560)
chr1 (232-410)||(38823210-38823388)
chr1 (229-411)||(48620630-48620812)
chr1 (232-405)||(30326959-30327132)
chr1 (242-403)||(37451292-37451452)
chr1 (232-403)||(23999343-23999514)
chr1 (272-403)||(51128895-51129026)
chr1 (221-403)||(27763320-27763500)
chr1 (234-403)||(28769651-28769819)
chr1 (232-405)||(42721035-42721208)
chr1 (245-405)||(4330288-4330450)
chr1 (232-405)||(7079070-7079254)
chr1 (229-403)||(11742360-11742533)
chr1 (230-405)||(8222125-8222297)
chr1 (234-411)||(41926161-41926338)
chr1 (232-400)||(3309144-3309311)
chr1 (238-405)||(47279191-47279358)
chr1 (231-405)||(10182015-10182189)
chr1 (234-403)||(46931406-46931578)
chr1 (233-405)||(14758038-14758210)
chr1 (232-399)||(27267212-27267376)
chr1 (228-400)||(39393375-39393547)
chr1 (272-405)||(32216091-32216224)
chr1 (248-405)||(27532988-27533144)
chr1 (232-405)||(31621560-31621733)
chr1 (232-402)||(47682504-47682673)
chr1 (234-405)||(27563912-27564084)
chr1 (232-405)||(27227492-27227657)
chr1 (229-411)||(1547280-1547454)
chr1 (272-405)||(3534968-3535101)
chr1 (231-331)||(30254853-30254952)
chr1 (227-402)||(238523-238697)
chr1 (228-405)||(15168081-15168265)
chr1 (272-405)||(40884849-40884982)
chr1 (319-405)||(25160715-25160801)
chr1 (234-401)||(33725611-33725778)
chr1 (232-380)||(21289661-21289816)
chr1 (227-296)||(22170745-22170814)
chr1 (331-405)||(22170806-22170880)
chr1 (225-265)||(4964062-4964102)
chr1 (355-403)||(38759652-38759700)
[»] chr8 (41 HSPs)
chr8 (231-405)||(1150123-1150297)
chr8 (232-405)||(10555220-10555393)
chr8 (230-405)||(43643613-43643788)
chr8 (241-405)||(37970537-37970701)
chr8 (231-403)||(27082858-27083030)
chr8 (228-404)||(34894962-34895138)
chr8 (229-403)||(1204923-1205097)
chr8 (231-405)||(16446893-16447067)
chr8 (231-401)||(30654605-30654775)
chr8 (230-405)||(36694984-36695159)
chr8 (245-403)||(31933906-31934064)
chr8 (225-405)||(6098536-6098716)
chr8 (244-403)||(23854451-23854610)
chr8 (230-405)||(38643975-38644150)
chr8 (232-410)||(13307622-13307800)
chr8 (234-403)||(465843-466012)
chr8 (232-405)||(12876108-12876281)
chr8 (232-404)||(5299965-5300137)
chr8 (230-405)||(16222860-16223035)
chr8 (246-405)||(11727037-11727196)
chr8 (293-403)||(1149652-1149762)
chr8 (229-405)||(9864144-9864320)
chr8 (231-411)||(34952043-34952223)
chr8 (232-403)||(41362517-41362685)
chr8 (232-400)||(44869495-44869664)
chr8 (321-411)||(35459723-35459813)
chr8 (231-403)||(8803837-8803998)
chr8 (230-411)||(40862416-40862597)
chr8 (234-403)||(7890977-7891137)
chr8 (232-403)||(33906223-33906382)
chr8 (228-403)||(39099139-39099304)
chr8 (232-296)||(15009241-15009305)
chr8 (259-405)||(41911006-41911153)
chr8 (230-316)||(24823379-24823465)
chr8 (358-402)||(4132706-4132750)
chr8 (272-405)||(43025741-43025874)
chr8 (350-400)||(7998411-7998461)
chr8 (232-285)||(4133146-4133199)
chr8 (223-280)||(34685728-34685785)
chr8 (336-403)||(1954009-1954077)
chr8 (220-268)||(4108924-4108972)
[»] chr3 (62 HSPs)
chr3 (231-405)||(3655214-3655388)
chr3 (232-405)||(37203058-37203231)
chr3 (231-405)||(26941272-26941446)
chr3 (232-405)||(20373308-20373481)
chr3 (232-405)||(37157699-37157871)
chr3 (229-402)||(47481510-47481683)
chr3 (231-403)||(40552273-40552445)
chr3 (278-405)||(42506087-42506214)
chr3 (232-405)||(51212993-51213166)
chr3 (230-405)||(48354930-48355105)
chr3 (225-403)||(21009816-21009997)
chr3 (225-400)||(35844310-35844485)
chr3 (231-405)||(52040934-52041109)
chr3 (230-405)||(4761661-4761838)
chr3 (232-405)||(4015451-4015624)
chr3 (231-405)||(11466814-11466988)
chr3 (215-405)||(54828713-54828902)
chr3 (231-405)||(7327494-7327669)
chr3 (247-405)||(11357376-11357535)
chr3 (242-403)||(29099356-29099517)
chr3 (234-403)||(43975902-43976068)
chr3 (232-403)||(54505799-54505969)
chr3 (231-405)||(44186513-44186687)
chr3 (220-405)||(53229164-53229350)
chr3 (232-405)||(27480391-27480564)
chr3 (230-401)||(22450957-22451128)
chr3 (230-405)||(39282642-39282816)
chr3 (234-405)||(46297774-46297945)
chr3 (229-405)||(33378797-33378970)
chr3 (229-405)||(34132923-34133099)
chr3 (230-405)||(21193595-21193770)
chr3 (245-404)||(40935995-40936154)
chr3 (232-400)||(45174494-45174664)
chr3 (272-405)||(2007964-2008097)
chr3 (225-405)||(46994673-46994842)
chr3 (234-405)||(24708127-24708295)
chr3 (235-405)||(22446076-22446247)
chr3 (260-404)||(53176074-53176217)
chr3 (228-405)||(32373459-32373634)
chr3 (272-405)||(3362284-3362419)
chr3 (232-405)||(44891498-44891661)
chr3 (272-403)||(24488976-24489107)
chr3 (274-405)||(38591727-38591862)
chr3 (233-405)||(25579731-25579903)
chr3 (303-405)||(43348320-43348421)
chr3 (336-405)||(29163913-29163982)
chr3 (353-405)||(33698265-33698317)
chr3 (352-405)||(14586682-14586735)
chr3 (355-403)||(22622732-22622780)
chr3 (228-296)||(55343405-55343473)
chr3 (224-267)||(53175706-53175749)
chr3 (275-316)||(41585408-41585449)
chr3 (350-405)||(11835639-11835695)
chr3 (272-316)||(33698219-33698263)
chr3 (258-313)||(2613907-2613962)
chr3 (225-280)||(19606914-19606969)
chr3 (349-400)||(36012245-36012296)
chr3 (229-280)||(47870211-47870262)
chr3 (233-327)||(11835701-11835790)
chr3 (350-384)||(53811695-53811729)
chr3 (233-289)||(29163839-29163895)
chr3 (228-280)||(42665541-42665593)
[»] chr5 (58 HSPs)
chr5 (228-405)||(24886098-24886277)
chr5 (234-403)||(699152-699321)
chr5 (229-405)||(22974084-22974260)
chr5 (221-403)||(31705616-31705797)
chr5 (230-403)||(38528241-38528413)
chr5 (228-405)||(14919530-14919708)
chr5 (223-405)||(22980784-22980966)
chr5 (230-403)||(5112317-5112490)
chr5 (272-411)||(30969320-30969459)
chr5 (231-405)||(9200232-9200406)
chr5 (229-400)||(8741893-8742065)
chr5 (230-401)||(22255179-22255351)
chr5 (232-404)||(35511480-35511652)
chr5 (231-405)||(1429147-1429321)
chr5 (232-402)||(15724490-15724658)
chr5 (244-405)||(27318489-27318650)
chr5 (232-405)||(31786648-31786821)
chr5 (230-405)||(12910348-12910528)
chr5 (229-405)||(19119856-19120032)
chr5 (233-405)||(32563150-32563322)
chr5 (232-403)||(7693230-7693401)
chr5 (232-405)||(23116224-23116397)
chr5 (230-402)||(27330304-27330474)
chr5 (234-405)||(5837557-5837728)
chr5 (232-405)||(22019632-22019805)
chr5 (234-405)||(7208866-7209037)
chr5 (230-402)||(35826489-35826660)
chr5 (230-405)||(36860421-36860596)
chr5 (232-402)||(14409332-14409501)
chr5 (226-403)||(17158035-17158214)
chr5 (231-405)||(39572818-39572992)
chr5 (240-403)||(43308656-43308819)
chr5 (298-405)||(35504431-35504538)
chr5 (245-403)||(26268087-26268245)
chr5 (225-402)||(8466738-8466914)
chr5 (232-405)||(36866762-36866935)
chr5 (234-405)||(25500928-25501099)
chr5 (232-405)||(40133385-40133558)
chr5 (244-403)||(33908245-33908404)
chr5 (272-402)||(28416532-28416662)
chr5 (311-402)||(15992545-15992636)
chr5 (289-403)||(6824483-6824599)
chr5 (303-405)||(23954791-23954894)
chr5 (231-400)||(35933901-35934063)
chr5 (303-405)||(21088768-21088870)
chr5 (245-405)||(8436979-8437138)
chr5 (232-403)||(5829897-5830063)
chr5 (274-403)||(42342775-42342902)
chr5 (230-327)||(13956425-13956522)
chr5 (272-387)||(25668690-25668804)
chr5 (232-316)||(26317775-26317859)
chr5 (265-316)||(22255608-22255659)
chr5 (234-369)||(11898004-11898139)
chr5 (354-402)||(13956367-13956415)
chr5 (233-280)||(21320752-21320799)
chr5 (232-309)||(16004474-16004552)
chr5 (275-316)||(5748478-5748519)
chr5 (219-268)||(12081285-12081334)
[»] chr2 (48 HSPs)
chr2 (232-405)||(33551016-33551189)
chr2 (232-405)||(37905709-37905881)
chr2 (263-403)||(43648277-43648416)
chr2 (229-405)||(19289353-19289524)
chr2 (231-405)||(17071767-17071941)
chr2 (231-403)||(11366413-11366585)
chr2 (232-405)||(26357577-26357750)
chr2 (231-403)||(19424660-19424832)
chr2 (231-405)||(17054126-17054300)
chr2 (234-403)||(3176941-3177110)
chr2 (230-405)||(29242168-29242343)
chr2 (231-405)||(4264107-4264281)
chr2 (234-400)||(36641988-36642154)
chr2 (230-402)||(39167396-39167568)
chr2 (229-405)||(2325408-2325576)
chr2 (234-405)||(43770869-43771039)
chr2 (233-403)||(13711465-13711635)
chr2 (231-404)||(27349970-27350143)
chr2 (232-400)||(4478368-4478537)
chr2 (230-403)||(31570766-31570939)
chr2 (234-403)||(41463882-41464051)
chr2 (232-402)||(4763628-4763801)
chr2 (234-405)||(33660398-33660569)
chr2 (230-405)||(4166920-4167095)
chr2 (232-405)||(33902068-33902239)
chr2 (232-401)||(19313852-19314020)
chr2 (232-344)||(35958909-35959021)
chr2 (272-405)||(33709262-33709395)
chr2 (232-403)||(44913662-44913834)
chr2 (329-405)||(45327817-45327893)
chr2 (231-399)||(5881533-5881706)
chr2 (331-405)||(41960939-41961013)
chr2 (229-405)||(18494310-18494474)
chr2 (336-401)||(31861956-31862021)
chr2 (234-402)||(44285951-44286119)
chr2 (230-296)||(41960881-41960947)
chr2 (303-403)||(7006953-7007053)
chr2 (232-314)||(41465509-41465591)
chr2 (351-411)||(19501764-19501823)
chr2 (232-298)||(31861895-31861961)
chr2 (232-280)||(18514771-18514819)
chr2 (231-267)||(39788590-39788626)
chr2 (232-267)||(22963400-22963435)
chr2 (232-267)||(22998042-22998077)
chr2 (259-377)||(41051263-41051382)
chr2 (226-280)||(19093407-19093461)
chr2 (358-399)||(35959023-35959064)
chr2 (231-279)||(43446463-43446511)
[»] chr6 (18 HSPs)
chr6 (229-400)||(4318839-4319010)
chr6 (230-403)||(1945831-1946005)
chr6 (230-403)||(5627389-5627562)
chr6 (231-403)||(7055228-7055400)
chr6 (232-405)||(7235046-7235218)
chr6 (225-405)||(29182156-29182336)
chr6 (231-400)||(8513232-8513401)
chr6 (232-405)||(33893014-33893186)
chr6 (231-405)||(3879950-3880124)
chr6 (248-405)||(15491631-15491788)
chr6 (234-400)||(6088910-6089076)
chr6 (234-403)||(30353371-30353540)
chr6 (258-405)||(21017123-21017270)
chr6 (286-403)||(6091196-6091313)
chr6 (272-405)||(33618874-33619007)
chr6 (233-411)||(20768087-20768261)
chr6 (229-363)||(18498430-18498565)
chr6 (230-280)||(19631747-19631797)
[»] scaffold0061 (1 HSPs)
scaffold0061 (234-403)||(43959-44128)
[»] scaffold0017 (1 HSPs)
scaffold0017 (234-403)||(154659-154828)
[»] scaffold0022 (1 HSPs)
scaffold0022 (234-403)||(146030-146199)
[»] scaffold0002 (4 HSPs)
scaffold0002 (258-402)||(94398-94542)
scaffold0002 (231-405)||(133-307)
scaffold0002 (286-405)||(408441-408559)
scaffold0002 (230-284)||(408702-408756)
[»] scaffold0318 (1 HSPs)
scaffold0318 (234-405)||(11908-12082)
[»] scaffold0008 (1 HSPs)
scaffold0008 (280-405)||(267331-267457)
[»] scaffold0009 (2 HSPs)
scaffold0009 (231-316)||(42347-42432)
scaffold0009 (229-296)||(100818-100885)


Alignment Details
Target: scaffold0291 (Bit Score: 146; Significance: 9e-77; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 228 - 405
Target Start/End: Original strand, 7883 - 8060
Alignment:
Q  228 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 327  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7883 taaagaaaaattctatggtgaagttataagaatgacttttttgatgaagttaacactataacatcaaaattgtaatgagtaacaccccactgtttgtaca 7982  T
Q  328 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7983 atgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 8060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 3e-67; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 229 - 405
Target Start/End: Original strand, 30055498 - 30055675
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 327  Q
    ||||||||||| ||||||||||| ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  30055498 aaaggaaaattctatggtgaagtcataagaatgactttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtaca 30055597  T
Q  328 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||| ||||||||| || |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  30055598 atgacatcaaaagttcagtcctcatagtatcattaattcatcagattaacaagactacacttaatctaattttatcct 30055675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 18797302 - 18797475
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| || ||||||||||||| | ||||||||||||||  |||| |||| ||||||||||||||||||| ||||||||||||    
T  18797302 aaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacacta--acataaaaaatgtaatgagtaacaccccactgtttgtacaat 18797399  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||| |||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  18797400 gacatcaaaagttcaatcctcatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcct 18797475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 37109847 - 37110020
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| |||| ||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||    
T  37109847 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatga 37109946  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| |||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  37109947 catcaaaagttcagtcattataatatcatcaattcatcagattaacaagactacacttaatataattttatcct 37110020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 230 - 405
Target Start/End: Complemental strand, 17842774 - 17842599
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| |||| ||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||    
T  17842774 aaggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaat 17842675  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||| ||||| ||| |||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  17842674 gacatcaaaagctcagtcattataatatcatcaattcatcagattaacaagactacacttaatataattttatcct 17842599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 27283719 - 27283892
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  27283719 ggaaaattctatggtgaagttataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccaccgtttgtacaatga 27283818  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     || ||||||||| || ||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  27283819 aatcaaaagttcagtcctcatagtattatcaatttatcagattaacaagactatacttaatctaattttatcct 27283892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 228 - 405
Target Start/End: Original strand, 38258516 - 38258693
Alignment:
Q  228 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 327  Q
    |||| ||||||| || |||||||| |||| ||||| ||||| | |||||||||||||||||||| |||| |||||||||||||||| ||  |||||||||    
T  38258516 taaaagaaaattctacggtgaagtcataaaaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccacaccgtttgtaca 38258615  T
Q  328 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  38258616 atgacatcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcct 38258693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 31579256 - 31579077
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttg-----ta 325  Q
    ||||||||| ||||||||||| |||||||| | ||||| | ||||||||||||||||||||||||| ||||||||||||||||||| |||||      ||    
T  31579256 aggaaaattctatggtgaagtcataagaataatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttaatttata 31579157  T
Q  326 caatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31579156 caatgacatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 31579077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 7334769 - 7334942
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| || ||||||||  | ||||||||||||| |||||||||||||||||||||| |||  ||||||||||||||||||| ||||||||||||||    
T  7334769 ggaaaattctacggtgaagtcgtgagaatgacttttttgatgaagttaacactataacataaaatatgtaatgagtaacaccccactgtttgtacaatga 7334868  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| |  ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  7334869 catcaaaagttcagttctcatagtatcatcaactcatcagcttaacaagactacacttaatctaattttatcct 7334942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 233 - 403
Target Start/End: Original strand, 24211717 - 24211887
Alignment:
Q  233 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    ||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| | ||||| || |||| |    
T  24211717 gaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctactgtttatagaatggc 24211816  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    || |||||||||  | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  24211817 atcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatc 24211887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 232 - 411
Target Start/End: Complemental strand, 5657667 - 5657488
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || ||||||||||||    ||||||||||||||||||||||||| |||  |||||||||||||| |||||||||| ||     
T  5657667 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtgg 5657568  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 411  Q
    ||| ||||||||| || |||||||||||||||||||||| |||||||| | |||||||||| |||||||||||| |||||    
T  5657567 catcaaaagttcagtcttcatagtatcatcaattcatcatattaacaaaaatacacttaatttaattttatcctactttg 5657488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 232 - 403
Target Start/End: Original strand, 37346997 - 37347168
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||||||||||||||| || | ||||| ||||| | ||||||||| |||||| |||||||| | ||||||||||||||||| |||||||||| |||    
T  37346997 ggaaaattttatggtgaagtcatgaaaatgatttttttggtgaagttaatactataccatcaaaaatataatgagtaacaccccattgtttgtacagtga 37347096  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||| ||||||||| || ||||||||||||||||| || | ||||||| ||||||||||||||||||||||||    
T  37347097 catcaaaagttcagtcctcatagtatcatcaatttattaaattaacaggactacacttaatctaattttatc 37347168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 12390819 - 12390646
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| ||||||||||| || |||  |||||||| | ||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||     
T  12390819 aaaggaaaattctatggtgaagtcatcagatcgacttttttggtgaagttaacactataacatcaaaagtgtaatgagtaacatcccactgtttgtgcag 12390720  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    |||||| |||||||   ||  |||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  12390719 tgacatcaaaagttatgtccccatagtattatcaattcatcagattaacaagactacacttaatctaattttat 12390646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 230 - 403
Target Start/End: Original strand, 10481576 - 10481751
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttgga-tgaagttaacactataacatcaaaattgtaatgagtaacaccccaa-tgtttgtaca 327  Q
    |||||||||| |||||| ||||||  |||||||||||||  | |||||||||||||||||||| |||| | |||||||||||||||| | ||||||||||    
T  10481576 aaggaaaattctatggtaaagttaggagaatgactttttttaatgaagttaacactataacataaaaaatataatgagtaacacccccactgtttgtaca 10481675  T
Q  328 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||||||| |||| |||| || | |||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  10481676 atgacatcaaaaattcagtctttatagtatcatcaattcatcagattaacaagactacgcttaatctaattttatc 10481751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 226 - 405
Target Start/End: Original strand, 21991605 - 21991784
Alignment:
Q  226 aataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgta 325  Q
    |||| ||||||||| || |||||||| || ||||||| ||||  | |||||||||||||||| ||||||||||||   ||||||||||||| ||||||||    
T  21991605 aatataggaaaattctagggtgaagtcatgagaatgatttttatggtgaagttaacactatagcatcaaaattgttgcgagtaacaccccactgtttgta 21991704  T
Q  326 caatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || || ||| ||||||||| ||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  21991705 cagtgtcatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 21991784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 225 - 403
Target Start/End: Complemental strand, 31520916 - 31520739
Alignment:
Q  225 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 324  Q
    |||||| ||||||||||||| |||||| || | ||||||||||| | ||||||||| |||||| |||||||| | || |||||||||| ||| |||||||    
T  31520916 aaataacggaaaattttatgatgaagtcatgaaaatgacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacactccattgtttgt 31520817  T
Q  325 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||| |||||| ||||||||| ||  ||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  31520816 acagtgacatcaaaagttcagtc-ccatagtatcatcaattcattaaattaacaagactacacttaatctaattttatc 31520739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 230 - 405
Target Start/End: Complemental strand, 32821241 - 32821066
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| || | ||||| ||||| | ||||||||||| ||||||||||||| |||| |||||||||| ||| ||||||||||||    
T  32821241 aaggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaatataacatcaaaaatgtagtgagtaacacaccactgtttgtacaat 32821142  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||| ||||||||| || || ||||||||||||||||| | ||||||||||||||| ||||| || |||||||||    
T  32821141 ggcatcaaaagttcagtcctcgtagtatcatcaattcattagattaacaagactacagttaatttagttttatcct 32821066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 233 - 403
Target Start/End: Complemental strand, 33688446 - 33688277
Alignment:
Q  233 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    ||||||| |||||||||||||| ||||||||||||  | | ||||||||||||||||||||||| ||| |||||||||| || | ||||||| || || |    
T  33688446 gaaaattatatggtgaagttatgagaatgacttttctggt-aagttaacactataacatcaaaagtgttatgagtaacatcctactgtttgtccagtggc 33688348  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    || ||||||||| ||   |||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  33688347 atcaaaagttcagtctctatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatc 33688277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 234 - 403
Target Start/End: Complemental strand, 44413564 - 44413394
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttgga-tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    |||||| |||||| |||| || | |||||||||||  | ||||||||||||||||||||||||| | || ||||||||||||||||||||||||| |||     
T  44413564 aaaattctatggtaaagtcatgaaaatgactttttttaatgaagttaacactataacatcaaaaatatagtgagtaacaccccaatgtttgtacactgaa 44413465  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    || ||||||||  ||  ||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||    
T  44413464 atcaaaagttcggtctccatagtatcttcaattcatcaaattaacaaggctacacttaatctaattttatc 44413394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 234 - 402
Target Start/End: Original strand, 23111167 - 23111335
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| | ||||||||| || | ||||| ||||  | ||||||||||||||||||||||||| | |  |||||||||| ||| | ||||||||||| ||    
T  23111167 aaaattctgtggtgaagtcatgaaaatgatttttctggtgaagttaacactataacatcaaaaatattgtgagtaacacaccactatttgtacaatggca 23111266  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    | |||||||||| |||| ||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  23111267 tcaaaagttcaaccatcgtagtatcatcaattcattagattaacaagactacacttaatctaattttat 23111335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 257 - 405
Target Start/End: Original strand, 29173540 - 29173688
Alignment:
Q  257 gaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagta 356  Q
    |||||||||||  | ||||||||||||| ||  ||||||| |||  |||||||||| ||| ||||||||||||||||| ||||||||| || ||||||||    
T  29173540 gaatgacttttctggtgaagttaacactgtagtatcaaaagtgttgtgagtaacactccactgtttgtacaatgacatcaaaagttcagtcctcatagta 29173639  T
Q  357 tcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||||||||||| | |||||||| |||||||||||||||||||||||    
T  29173640 tcatcaattcatcaaactaacaagaatacacttaatctaattttatcct 29173688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 233 - 405
Target Start/End: Complemental strand, 48928748 - 48928577
Alignment:
Q  233 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    ||||||||||||||||||| || ||||||||||||  | |||||| |||||||||||||||||| |||| |||||| ||||||| | |||||||  || |    
T  48928748 gaaaattttatggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgcc 48928649  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || ||||||||| ||  |||||||| |||||||||||| |||||||||| | |||||||||||||||||||||    
T  48928648 atcaaaagttcagtc-ccatagtattatcaattcatcagattaacaagattgcacttaatctaattttatcct 48928577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 22687228 - 22687387
Alignment:
Q  246 tgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaa 345  Q
    |||||| || ||||||||||||  ||||||||||||||||||||||||||| |||  |||||||||| ||| ||||||| || ||  || |||||||||     
T  22687228 tgaagtcatgagaatgacttttctgatgaagttaacactataacatcaaaaatgttgtgagtaacactccactgtttgtgcagtggtatcaaaagttcag 22687327  T
Q  346 tcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||  ||||||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  22687328 tccccatagtatcatcaattcatcagattaacaataatacacttaatctaattttatcct 22687387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 234 - 405
Target Start/End: Complemental strand, 27421563 - 27421393
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| |||||||||||  | | ||||| ||||| | ||||||||||||||||||||||||| |||  |||||||||| ||| ||||||||||||||||    
T  27421563 aaaattctatggtgaagtcgtgataatgatttttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtttgtacaatgaca 27421464  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||||||||| || | ||| |||||| |||| |||| |||||||||| |||||||||||||||||||||||    
T  27421463 tcaaaagttcagtcct-ataatatcataaatttatcagattaacaagaatacacttaatctaattttatcct 27421393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 230 - 401
Target Start/End: Complemental strand, 41765266 - 41765095
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    ||||||||||  |||||||||| || ||||||||||||  ||| |||| || |||||| |||||||| |||| |||||| ||||||| |||||||||  |    
T  41765266 aaggaaaattccatggtgaagtcatgagaatgacttttctgataaagtcaatactatagcatcaaaagtgtagtgagtagcaccccactgtttgtacggt 41765167  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 401  Q
    | ||| |||||| || || |||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  41765166 ggcatcaaaagtccagtcctcatagtatcatcaattcatcagattaacaagactgcacttaatctaatttta 41765095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 231 - 405
Target Start/End: Original strand, 43686015 - 43686188
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| |  | ||||||||||||| ||||||||||||||||| ||||||| |||  |||||||||||| | |||||||||||||    
T  43686015 aggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaacactataatatcaaaaatgttgtgagtaacaccc-actgtttgtacaatg 43686113  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     ||| ||||||||| ||   ||||||||| |||||||||| | |||||||| |||| ||||||||||||||||||    
T  43686114 gcatcaaaagttcagtccctatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcct 43686188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 232 - 411
Target Start/End: Original strand, 4582894 - 4583073
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| |  | ||||||||||  | ||||||||| ||||||  ||||||| |||  |||||||||||||| | ||||||||||||    
T  4582894 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaatactatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatga 4582993  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 411  Q
    ||| ||||||||| ||  |||||||||| |||||||||| | |||||||| |||| |||||||||||||||||| |||||    
T  4582994 catcaaaagttcagtccccatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcctactttg 4583073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 230 - 405
Target Start/End: Complemental strand, 9356014 - 9355839
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||||||||||||||| || ||||||||  ||| | |||| ||||||||||| ||| |||| |||| |||| || |||||| |||||||||| |    
T  9356014 aaggaaaattttatggtgaagtcatgagaatgaccattttggtgaatttaacactatagcataaaaaatgtagtgagcaataccccactgtttgtacagt 9355915  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||| ||||||| | |  ||||| |||| | ||||||||| |||||||||||||||||||||||||||| |||||    
T  9355914 gacatcaaaagtttagttctcatattatcgttaattcatcagattaacaagactacacttaatctaatttcatcct 9355839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 227 - 405
Target Start/End: Original strand, 8861255 - 8861433
Alignment:
Q  227 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac 326  Q
    |||| |||||||| ||||||||||| || ||||||||||||     ||||||||||||||| |||||||| ||| |||| |||||||||| |||||||||    
T  8861255 ataatggaaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaacactatagcatcaaaagtgttatgaataacaccccactgtttgtac 8861354  T
Q  327 aatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | || ||| ||||||| | ||  |||||||||||||||| |||| |||||||| | |||| ||||||||||||||||||    
T  8861355 agtggcatcaaaagttaagtccccatagtatcatcaattaatcagattaacaacaatacatttaatctaattttatcct 8861433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 6546494 - 6546667
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| |||||||||| ||||    |||||||||||||||| |||||||| |||   ||||||||||||| | |||||||| | |    
T  6546494 ggaaaattctatggtgaagtcataagaatgatttttctagtgaagttaacactatagcatcaaaagtgttgcgagtaacaccccactatttgtacagtaa 6546593  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||| | |   ||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  6546594 catcaaaagtttactatccatagtatcatcaattcatcagattaacaagaatacatttaatctaattttatcct 6546667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 15612944 - 15612772
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || ||||| || |||    |||||||||||||||||||||||| | || ||||||||||||||| |||||||| | ||     
T  15612944 ggaaaattctatggtgaagtcatgagaataacgtttcttgtgaagttaacactataacatcaaagt-gttatgagtaacaccccagtgtttgtagagtgg 15612846  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| ||   ||| |||||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  15612845 catcaaaagttcagtccctataatatcatcaattcatcagattaacaagaatacacttaatttaattttatcct 15612772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 259 - 402
Target Start/End: Original strand, 26980325 - 26980468
Alignment:
Q  259 atgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatc 358  Q
    |||||||||  | ||||||||||| |||| |||||||| |||  ||||||||||||||  ||||||||| || ||| ||||||||| ||  |||| ||||    
T  26980325 atgacttttatggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacggtttgtacagtggcatcaaaagttcagtccccataatatc 26980424  T
Q  359 atcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  26980425 atcaattcatcaaattaacaagaatacacttaatctaattttat 26980468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 405
Target Start/End: Original strand, 32432431 - 32432600
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| |  | ||||| ||||  | |||||||||||||||     ||||| |||  |||||||||||||| |||||||||||||    
T  32432431 aggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactat-----caaaaatgttgtgagtaacaccccattgtttgtacaatg 32432525  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||| ||  ||||||||||||||||||||| | |||||||| |||| ||||| ||||||||||||    
T  32432526 acatcaaaagttcagtctccatagtatcatcaattcatcagactaacaagaatacagttaatataattttatcct 32432600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 256 - 405
Target Start/End: Complemental strand, 48928458 - 48928310
Alignment:
Q  256 agaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagt 355  Q
    ||||||||||||  | |||||| |||||||||||||||||| |||| |||||| ||||||| | |||||||  || ||| ||||||||| ||  ||||||    
T  48928458 agaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgccatcaaaagttcagtcc-catagt 48928360  T
Q  356 atcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || |||||||||||| |||||||||| | |||||||||||||||||||||    
T  48928359 attatcaattcatcagattaacaagattgcacttaatctaattttatcct 48928310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 234 - 405
Target Start/End: Original strand, 11071182 - 11071354
Alignment:
Q  234 aaaattttatggtgaagttataagaatg-actttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    |||||| ||||||||||| || | |||| | ||||| | | ||||||  |||||| |||||||| | ||  ||||||||| ||| |||||||||| ||||    
T  11071182 aaaattctatggtgaagtcatgaaaatgtatttttttggtaaagttagtactatatcatcaaaaatatagcgagtaacactccactgtttgtacagtgac 11071281  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || ||||||||| |  |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  11071282 atcaaaagttcagttctcatagtatcatcaattcatcagattaacaacactacgcttaatctaattttatcct 11071354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 230 - 381
Target Start/End: Complemental strand, 26524515 - 26524364
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| || ||||||||||||  | ||| ||||||||||||||||||||| |||  ||| |||||| ||| ||||||| || |    
T  26524515 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgatgttaacactataacatcaaaaatgttgtgactaacactccattgtttgtgcagt 26524416  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaaga 381  Q
    | ||| |||||| || || ||||||||||||||||| |||| ||||||||||    
T  26524415 ggcatcaaaagtccagtcctcatagtatcatcaatttatcatattaacaaga 26524364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 232 - 402
Target Start/End: Original strand, 12165727 - 12165897
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| || ||||||||  | | ||||||||||  | |||||||||||||||| |||| ||| |||  |||||||||||||| |||||||||| ||     
T  12165727 ggaaaattctacggtgaagtcgttaaaatgacttttctggtgaagttaacactatagcatccaaagtgttgtgagtaacaccccactgtttgtacagtgg 12165826  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    ||| ||||||| | ||     |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  12165827 catcaaaagttaagtcccttaagtatcatcaattcatcagattaacaagaatacacttaatctaattttat 12165897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 234 - 405
Target Start/End: Complemental strand, 25691729 - 25691557
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaac-accccaatgtttgtacaatgac 332  Q
    |||||||||||||||||| || ||||||||||||    ||||||||||||||||||||||||| | |  |||||||  ||| || |||||||||| || |    
T  25691729 aaaattttatggtgaagtcatgagaatgacttttctcgtgaagttaacactataacatcaaaagtattgtgagtaattacctcactgtttgtacagtggc 25691630  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || || |||||| |  | ||||||| |||||||||||| |||||||| | |||| ||||||||||||||||||    
T  25691629 atcaacagttcagttcttatagtattatcaattcatcatattaacaaaaatacatttaatctaattttatcct 25691557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 403
Target Start/End: Original strand, 38053501 - 38053624
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 371  Q
    ||||||||| |||||||||| |||| |||||||||||| |||| | ||||||||||||||||| ||||||||| |  ||||||| |||||||            
T  38053501 tgaagttaatactataacataaaaaatgtaatgagtaaaaccctactgtttgtacaatgacatcaaaagttcagttctcatagtgtcatcaa-------- 38053592  T
Q  372 attaacaagactacacttaatctaattttatc 403  Q
    ||||||||||||||||||||||||||||||||    
T  38053593 attaacaagactacacttaatctaattttatc 38053624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 232 - 403
Target Start/End: Complemental strand, 10359400 - 10359229
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || | ||||||||||  | | || ||||   |||| |||||||| |||| ||||||||| || | | ||| |||| |||    
T  10359400 ggaaaattctatggtgaagtcatgataatgacttttctggtaaaattaatcttatagcatcaaaagtgtagtgagtaacatcctactatttatacagtga 10359301  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacactt-aatctaattttatc 403  Q
    ||| ||||||||| || | |||||||||||||||||||| || ||||||||||||||| ||||||||||||||    
T  10359300 catcaaaagttcagtc-tgatagtatcatcaattcatcagatcaacaagactacacttaaatctaattttatc 10359229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 37704143 - 37704305
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaat-tgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    |||||||| |||| |||| |||||| ||||| |||||  ||||||||||||||||| ||| ||||  |||| |||||||||||||| ||||||||||  |    
T  37704143 ggaaaattctatgatgaaattataaaaatgattttttt-atgaagttaacactatagcataaaaaaatgtagtgagtaacaccccattgtttgtaca--g 37704239  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |         |||| ||  |||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||    
T  37704240 a---------ttcagtccccatagtatcatcaatttatcagattaacaagactacacttaatttaattttatcct 37704305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 15672830 - 15672775
Alignment:
Q  350 catagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  15672830 catagtatcatcaattcatcagactaacaagaatacacttaatctaattttatcct 15672775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 34362334 - 34362205
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||| |||| ||||||||||||      |||||||||||||| |||||||| |||  |||||||||||||| |||||||||| ||     
T  34362334 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgg 34362235  T
Q  332 cattaaaagttcaatcatcatagtatcatca 362  Q
    || | |||||||| |  ||||||||||||||    
T  34362234 ca-tcaaagttcagttctcatagtatcatca 34362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 44598745 - 44598811
Alignment:
Q  336 aaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    |||| |||||||  ||||||||||| ||||||||| |||||||||| |||| |||||||||||||||    
T  44598745 aaaaattcaatccccatagtatcataaattcatcagattaacaagaatacatttaatctaattttat 44598811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 43925167 - 43925247
Alignment:
Q  322 tgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||||||||||||| ||||||||| ||  |||||||||||||| | |||| | |||||| | |||||||||||||||||||||    
T  43925167 tgtacaatgacatcaaaagttcagtctacatagtatcatcaact-atcagactaacaataatacacttaatctaattttatc 43925247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 403
Target Start/End: Complemental strand, 32593327 - 32593204
Alignment:
Q  279 aacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaaca 378  Q
    ||||||||| ||| |||| |||| |||||| ||||||| ||||| ||   ||  || ||||||||| || ||| |||||||||||||||||| |||| ||    
T  32593327 aacactatagcattaaaagtgtagtgagtagcaccccactgtttatatggtggtatcaaaagttcagtc-tcacagtatcatcaattcatcagattatca 32593229  T
Q  379 agactacacttaatctaattttatc 403  Q
    | ||| || ||||||||||||||||    
T  32593228 aaactgcatttaatctaattttatc 32593204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 403
Target Start/End: Complemental strand, 37703551 - 37703513
Alignment:
Q  365 tcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  37703551 tcatcagattaataagactacacttaatctaattttatc 37703513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 3e-67; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 19089664 - 19089491
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  19089664 ggaaaattctatggtgaagtcataagaataacttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtataatga 19089565  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19089564 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 19089491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 37663951 - 37663779
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||  |||| |||| ||||||||||||||||||| |||||||||||||    
T  37663951 aggaaaattctatggtgaagtcataagaatgacttttttgatgaagttaacacta--acattaaaactgtaatgagtaacaccccactgtttgtacaatg 37663854  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37663853 acatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 37663779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 222 - 405
Target Start/End: Complemental strand, 25701278 - 25701095
Alignment:
Q  222 ataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 321  Q
    |||||||||||||||||||||||||||||| || | ||||||||||| | | ||||||||| ||||||||||||| |||| |||||||||||| | ||||    
T  25701278 ataaaataaaggaaaattttatggtgaagtcatgataatgacttttttggtaaagttaacattataacatcaaaagtgtagtgagtaacaccctactgtt 25701179  T
Q  322 tgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||| |||||| ||||||||| || |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  25701178 tgtacagtgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaggactacactaaatctaattttatcct 25701095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 231 - 405
Target Start/End: Original strand, 25184112 - 25184286
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| || ||||||||| ||| | ||||||||||||||||||||||||| ||||||||||||||| | | |||||||||||||    
T  25184112 aggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatg 25184211  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||  ||||||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||    
T  25184212 acatccaaagttcaatcttcatagtatcatcaactcatcagattaacaagactacacttgatctaattttatcct 25184286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 879760 - 879586
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    |||||||||||| |||||||| || ||||| | ||||| | |||||| |||||||||||||||||| |||||||||||||||| || |||||||||||||    
T  879760 aggaaaattttaaggtgaagtcatgagaataatttttttggtgaagtaaacactataacatcaaaaatgtaatgagtaacacctcattgtttgtacaatg 879661  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||| |||| ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  879660 acatcaaaagtttaatcttcatagtatcatcaactcatcagattaacaagactacacataatctaattttatcct 879586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 230 - 405
Target Start/End: Complemental strand, 55478108 - 55477929
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca----atgtttgta 325  Q
    |||||||||| ||||||||||| || ||||||| ||||| | ||||||||||||||||||||||||| ||||| ||||||||| |||     ||||||||    
T  55478108 aaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacactccactgtttgtttgta 55478009  T
Q  326 caatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55478008 caatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 55477929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 230 - 403
Target Start/End: Complemental strand, 34361704 - 34361532
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| |||||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||||||| |||||||| |||    
T  34361704 aaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgtagaat 34361605  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||||||||||||| | | ||||| |||||||||||||||   ||||||| | |||||||||| ||||||||||    
T  34361604 gacattaaaagttc-agcctcataatatcatcaattcatccggttaacaaaattacacttaatataattttatc 34361532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 232 - 403
Target Start/End: Complemental strand, 19440860 - 19440688
Alignment:
Q  232 ggaaaattttatggtgaa-gttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    |||||||| ||||||||| || || ||||||||||||| | ||| ||||||||||||||||||||| |||||||| |||||| |||  ||||||||||||    
T  19440860 ggaaaattctatggtgaaagtcatgagaatgacttttttggtgatgttaacactataacatcaaaaatgtaatgattaacactccaccgtttgtacaatg 19440761  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
     ||| ||||||||| || ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19440760 gcatcaaaagttcagtcctcataatatcatcaattcatcagattaacaagactacacttaatctaattttatc 19440688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 231 - 403
Target Start/End: Original strand, 42199728 - 42199900
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||| | ||||||||| | |||||||||| ||||| | ||||||||| ||||||||||||||| |||||||||||| |||||| | |||||| ||||    
T  42199728 aggaaaaatctatggtgaaatcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaatgagtaataccccattatttgtagaatg 42199827  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||| |||||||||  | |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  42199828 acataaaaagttcagccctcatagtatcatcaattcatcagattaacaagactacacttaatataattttatc 42199900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 234 - 405
Target Start/End: Complemental strand, 34948306 - 34948135
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||||||||||||||| || ||||||||||||  |  |||||||||||||||||||||||| |||  |||||||||||||| |||||||| | || ||    
T  34948306 aaaattttatggtgaagtcatgagaatgacttttctggcgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtaaagtggca 34948207  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||||||||| || ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  34948206 tcaaaagttcagtcctcataatatcatcaattcatcatattaacaagaatacacttaatctaattttatcct 34948135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 230 - 403
Target Start/End: Complemental strand, 32912793 - 32912620
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| | | |||||| |||    
T  32912793 aaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctagtatttgtagaat 32912694  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    || || |||||||||    ||||| ||||||||||| ||||  |||||||||||||||||||| ||||||||||    
T  32912693 gatatcaaaagttcagcactcataatatcatcaatttatcaggttaacaagactacacttaatataattttatc 32912620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 234 - 405
Target Start/End: Original strand, 17173292 - 17173463
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| |||||||||||||  | ||||||||||  ||||||||||||| ||||| ||||||| |||  |||||||||||||| ||||||||||||||||    
T  17173292 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17173391  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||||||||||||  ||||||||||| ||||||||| | ||| |||| |||||||||||||||||||||||    
T  17173392 tcaaaagttcaatctccatagtatcattaattcatcagactaagaagaatacacttaatctaattttatcct 17173463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 28003197 - 28003024
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || ||||||||||||  | |||||| ||||||||| |||||||| |||| | ||||  || ||| |||||||||| |||    
T  28003197 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtcagtagtactccactgtttgtacagtga 28003098  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  28003097 catcaaaagttcagtcatcatagtatcatcaattcatcggattaacaagactgcacttaatctaattttatcct 28003024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 222 - 402
Target Start/End: Complemental strand, 29584419 - 29584241
Alignment:
Q  222 ataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 321  Q
    |||||| ||||||||||| |||||||||||  |  |||||||||||  | ||||||||||||||||||||||||| |||  ||||||||||| || ||||    
T  29584419 ataaaaaaaaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacacctcactgtt 29584322  T
Q  322 tgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    ||||||||| ||| ||||||||| || |||||||||||||||||||||| |||||  ||| ||||||||||||||||||||    
T  29584321 tgtacaatggcatcaaaagttcagtcttcatagtatcatcaattcatcagattaatgagaatacacttaatctaattttat 29584241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 234 - 403
Target Start/End: Complemental strand, 36493897 - 36493728
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| ||||||||||| || | ||| ||||||| | ||||||||| |||||| |||||||| | || |||||||||||||| |||||||||| |||||    
T  36493897 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacaccccattgtttgtacagtgaca 36493798  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | ||||||||| ||  ||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  36493797 tcaaaagttcagtccccatagtatcatcaattcattaaattaacaagactacacttaatctaattttatc 36493728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 234 - 405
Target Start/End: Original strand, 17167715 - 17167886
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| |||||||||||||  | ||||||||||  ||||||||||||| ||||| ||||||| |||  |||||||||||||| ||||||||||||||||    
T  17167715 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17167814  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||||||||| ||  ||||||||||| ||||||||| | ||| |||| |||||||||||||||||||||||    
T  17167815 tcaaaagttcattctccatagtatcattaattcatcagactaagaagaatacacttaatctaattttatcct 17167886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 229 - 405
Target Start/End: Original strand, 50764732 - 50764903
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||||||||  ||||||||| |||  |||||||||||||| |||||||||      
T  50764732 aaaggaaaattttatg---aagtcatgagaataacttttttgatgaagttaacacta--acatcaaaagtgttgtgagtaacaccccactgtttgtacgg 50764826  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||| |||||||||||| |||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||    
T  50764827 tgacatcaaaagttcaatcctcatagtatcatcaattcattagattaacaagaatacatttaatctaattttatcct 50764903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 228 - 405
Target Start/End: Original strand, 50697238 - 50697414
Alignment:
Q  228 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 327  Q
    |||||||||||| || |||||||| |||| ||||| |||||   |||||| ||||||||||||| |||| | ||| ||||||||||| |  |||||||||    
T  50697238 taaaggaaaattctacggtgaagtcataaaaatgatttttttagtgaagtaaacactataacataaaaaatataacgagtaacaccctaccgtttgtaca 50697337  T
Q  328 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||| |||||||||||  || ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  50697338 atgacatcaaaagttcaattctc-tagtatcatcaattcatcagattaacaagactacacttaatataattttatcct 50697414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 234 - 402
Target Start/End: Original strand, 27396618 - 27396786
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| ||||||||||| || ||||||||||||  | ||||||||||| |||| ||| |||| ||| ||||||||||||| | ||||||||||||||||    
T  27396618 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattatagcattaaaagtgttatgagtaacaccctactgtttgtacaatgaca 27396717  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    | |||||||   || |||||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  27396718 tcaaaagtttcgtcctcatagtatcatcaattcatcagattaacaagaatacacttaatttaattttat 27396786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 223 - 405
Target Start/End: Original strand, 4597984 - 4598165
Alignment:
Q  223 taaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgttt 322  Q
    ||||| ||| ||||||||||||||||||| || ||||||||||||  | ||||||||||||||||||||| ||| |||  |||||||||||||| |||||    
T  4597984 taaaagaaatgaaaattttatggtgaagtcattagaatgacttttctggtgaagttaacactataacatc-aaagtgttgtgagtaacaccccactgttt 4598082  T
Q  323 gtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||| || ||| ||||||||| ||  | |||  |||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  4598083 gtacagtggcatcaaaagttcagtccccttagactcatcaattcatcatattaacaagaatacacttaatttaattttatcct 4598165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 9139245 - 9139418
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| || | | ||||||||| | ||||||||||  |||| ||| |||| |  | ||||||||||||||  ||||||||| |    
T  9139245 aaggaaaattctatggtgaagtcatgaaattgacttttttggtgaagttaacgttatagcataaaaaat--agtgagtaacaccccaccgtttgtacagt 9139342  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||| ||||||||||||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  9139343 gacataaaaagttcaatccccatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcct 9139418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 229 - 405
Target Start/End: Complemental strand, 35021249 - 35021073
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| ||||||||||| || | ||||||||||  | ||||||||||| ||||||||||||| |||| |||||||||| ||| ||||||||||     
T  35021249 aaaggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacattataacatcaaaaatgtagtgagtaacacaccactgtttgtacat 35021150  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || | | |||||||   || || ||||||||||||||||| | |||||||| |||||||||||||||||||||||||    
T  35021149 tggcgtcaaaagtttcgtcctcgtagtatcatcaattcattagattaacaaaactacacttaatctaattttatcct 35021073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 23761114 - 23761243
Alignment:
Q  274 aagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacat 373  Q
    ||||||||||||||||||||||| |||  ||||||||||| || |||||||| | |||||| ||||||||| ||  ||||||||||||||||||||| ||    
T  23761114 aagttaacactataacatcaaaagtgttgtgagtaacacctcactgtttgtatagtgacatcaaaagttcagtccccatagtatcatcaattcatcagat 23761213  T
Q  374 taacaagactacacttaatctaattttatc 403  Q
    |||||||| |||||||||||||||||||||    
T  23761214 taacaagaatacacttaatctaattttatc 23761243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 38011851 - 38012024
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| ||||||||| | || ||||||||||||  | |||||| |||||||||||||||||| |||| ||| || ||||||| |||||||||      
T  38011851 aaaggaaaattctatggtgaaatcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgaatagcaccccactgtttgtacgg 38011950  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    || ||| ||||||||| ||  |||| ||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  38011951 tgccatcaaaagttcagtccccataatattatcaattcatcagattaacaagactacacttaatttaattttat 38012024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 232 - 402
Target Start/End: Original strand, 49375966 - 49376137
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    |||||||| || |||||||| || |||||||||||||  | ||||||||||| |||| |||||||| |||  |||||||||||||| || ||||||| ||    
T  49375966 ggaaaattctacggtgaagtcatgagaatgactttttctggtgaagttaacattatagcatcaaaagtgtcgtgagtaacaccccactgcttgtacagtg 49376065  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
     ||| ||||||||| || |||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||    
T  49376066 gcatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagattacgcttgatctaattttat 49376137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 235 - 403
Target Start/End: Original strand, 6864038 - 6864206
Alignment:
Q  235 aaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacat 334  Q
    ||||| |||||||| || || ||||||||||||| | |||||||| |||||||||||||||| | |||||| ||||| || | | ||||||||||  |||    
T  6864038 aaattgtatggtgatgtcatgagaatgacttttttggtgaagttatcactataacatcaaaaatttaatgaataacatccaactttttgtacaatagcat 6864137  T
Q  335 taaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
     |||||| || || ||||||||||||||||| |||| ||||||||||||||| ||||| ||||||||||    
T  6864138 caaaagtccagtcctcatagtatcatcaatttatcagattaacaagactacatttaatttaattttatc 6864206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 235 - 405
Target Start/End: Original strand, 32592096 - 32592266
Alignment:
Q  235 aaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacat 334  Q
    ||||||||| ||||||| || | ||||||||||| |||||||||||||||| |  ||||||| |||   ||||||||| ||| |||||||| | ||||||    
T  32592096 aaattttattgtgaagtcattataatgacttttttgatgaagttaacactacagtatcaaaagtgttgagagtaacactccactgtttgtatagtgacat 32592195  T
Q  335 taaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     ||||||||| ||  | ||||||||||||||||||| |||||||||| |||| ||||| ||||||||||||    
T  32592196 caaaagttcagtccccttagtatcatcaattcatcagattaacaagaatacatttaatttaattttatcct 32592266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 221 - 403
Target Start/End: Original strand, 3042600 - 3042790
Alignment:
Q  221 aataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgt 320  Q
    ||||||| ||||||||||| ||||||||| | |||| ||||| ||||| | ||||||||||||||||||||  ||| |||||||||||| ||||||  ||    
T  3042600 aataaaaaaaaggaaaattctatggtgaaatcataaaaatgatttttttggtgaagttaacactataacatacaaaatgtaatgagtaataccccaccgt 3042699  T
Q  321 ttgtacaatgacattaaaagttcaatc--------atcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    || ||||||||||| |||| |||| ||        ||||  ||||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  3042700 ttatacaatgacatcaaaaattcagtcattagagtatcaatgtatcatcaattcatcatattaacaagattacacttaatataattttatc 3042790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 39397918 - 39398082
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || ||||||||||||  | |||||||||||||||||||| |||| |||  |||||||||||||| |||||||||| |||    
T  39397918 ggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaacactataacattaaaagtgttgtgagtaacaccccattgtttgtacagtga 39398017  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| || ||  ||||||||||         |||||||||| |||||||||||||||||||||||    
T  39398018 catcaaaagttcagtcttctcagtatcatca---------attaacaagaatacacttaatctaattttatcct 39398082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 257 - 400
Target Start/End: Complemental strand, 54499425 - 54499281
Alignment:
Q  257 gaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac-aatgacattaaaagttcaatcatcatagt 355  Q
    |||||||||||  | |||||||||||||||| |||||||| |||  ||||||||||||||  |||||||| |||||||| ||||||||| ||   |||||    
T  54499425 gaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccaccgtttgtactaatgacatcaaaagttcagtctctatagt 54499326  T
Q  356 atcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
    ||||||||||||||| |||||||||| || |||||||||||||||    
T  54499325 atcatcaattcatcatattaacaagaatatacttaatctaatttt 54499281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 270 - 405
Target Start/End: Complemental strand, 46888330 - 46888195
Alignment:
Q  270 gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 369  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||| | ||||||||  | ||| ||||||||| ||  |||| |||| | ||||||||    
T  46888330 gatgaagttaatactataacatcaaaattgtagtgagtaataccccactatttgtacagcggcatcaaaagttcagtccccatactatcgttaattcatc 46888231  T
Q  370 acattaacaagactacacttaatctaattttatcct 405  Q
    | |||||||| |||||||||||||||||||||||||    
T  46888230 agattaacaaaactacacttaatctaattttatcct 46888195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 232 - 403
Target Start/End: Complemental strand, 55241315 - 55241145
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || ||||||||||||    ||||||||| ||||||  |||||||||||   ||||||||||||| |||||||||| ||     
T  55241315 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaatactatattatcaaaattgttgcgagtaacaccccactgtttgtacagtgg 55241216  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||| ||||||||| ||  |||||||||||||||| |||| | ||| |||| |||||||||||||||||||||    
T  55241215 catcaaaagttcagtccccatagtatcatcaatttatcaga-taagaagaatacacttaatctaattttatc 55241145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 293 - 402
Target Start/End: Complemental strand, 4934353 - 4934243
Alignment:
Q  293 aaaattgtaatgagtaacaccccaat-gtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaa 391  Q
    |||| |||| ||||||||||||| || ||||||||| || ||| |||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  4934353 aaaaatgtagtgagtaacacccccattgtttgtacactggcatcaaaagttcaatcctcatagtatcatcatttcatcagattaacaagactacacttaa 4934254  T
Q  392 tctaattttat 402  Q
    |||||||||||    
T  4934253 tctaattttat 4934243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 246 - 405
Target Start/End: Complemental strand, 5048162 - 5048003
Alignment:
Q  246 tgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaa 345  Q
    ||||||||| ||||||| ||||  | |||||| ||| |||||||||||||| |||| ||||||  ||| || ||||||||| |||| || |||||||||     
T  5048162 tgaagttatgagaatgatttttctggtgaagtcaactctataacatcaaaagtgtagtgagtaggaccacactgtttgtacgatgatatcaaaagttcag 5048063  T
Q  346 tcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |   ||||||||||||||||||| | |||||||||||| || ||||||||||||||||||    
T  5048062 ttcccatagtatcatcaattcatgagattaacaagactgcatttaatctaattttatcct 5048003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 227 - 405
Target Start/End: Original strand, 32579439 - 32579619
Alignment:
Q  227 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt-- 324  Q
    |||||||||||||||||||||||||| | ||||||||||||  | |||||| |||| ||||||||||||| || | |||||| ||||||| |||||||      
T  32579439 ataaaggaaaattttatggtgaagttctgagaatgacttttctggtgaagtcaacattataacatcaaaagtgcagtgagtagcaccccagtgtttgttg 32579538  T
Q  325 -acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     ||  || ||| ||||||| | || ||||||||| |||| ||||||| ||||||| ||||  ||||||||||||||||||||    
T  32579539 tacggtgccatcaaaagtttagtc-tcatagtattatcagttcatcagattaacatgactgtacttaatctaattttatcct 32579619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 360
Target Start/End: Original strand, 37287732 - 37287862
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    ||||||||| ||||||||||| || |||||||||||||  | | ||||||||||||||||||||||| |||  |||||||||||||| |||||||||| |    
T  37287732 aggaaaattctatggtgaagtaatgagaatgactttttttggtaaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagt 37287831  T
Q  330 gacattaaaagttcaatcatcatagtatcat 360  Q
    | ||| |||||||||||| ||||| ||||||    
T  37287832 ggcatcaaaagttcaatcctcataatatcat 37287862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 233 - 402
Target Start/End: Original strand, 37775670 - 37775837
Alignment:
Q  233 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    ||||||| || |||||||| || | ||||| ||||| | |||||||| |||||||| || |||| |||  |||||||||||||| |||||||||| || |    
T  37775670 gaaaattctacggtgaagtcattaaaatgatttttttggtgaagttagcactataatattaaaaatgttgtgagtaacaccccactgtttgtacagtggc 37775769  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    || ||||||||   | |  ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  37775770 atcaaaagttcccccct--tagtatcatcaattcatcagattaacaagaatacacttaatctaattttat 37775837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 234 - 405
Target Start/End: Original strand, 47253751 - 47253913
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| ||||||||||| || ||||||||||||| | |||||||||||||||| |||||||| |||  ||||||||| |||| ||||| |||| |||||    
T  47253751 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactatatcatcaaaagtgttgtgagtaaca-cccattgtttatacagtgaca 47253849  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||||||||| || ||||||||        |||||| |||||||||| |||||||||| ||||||||||||    
T  47253850 tcaaaagttcagtcctcatagta--------tcatcagattaacaagaatacacttaatttaattttatcct 47253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 232 - 402
Target Start/End: Original strand, 7703517 - 7703679
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||| | |||| || ||||||||||||  | ||||||||||||||||||||||||| |||  | |||||||||||| |||||||||  |||    
T  7703517 ggaaaattctatgttaaagtcatgagaatgacttttctggtgaagttaacactataacatcaaaagtgttgtcagtaacaccccactgtttgtacggtga 7703616  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    ||| ||||||||| ||  |||||||        |||||| |||||||||| ||||||||||||||||||||    
T  7703617 catcaaaagttcagtccccatagta--------tcatcagattaacaagaatacacttaatctaattttat 7703679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 405
Target Start/End: Complemental strand, 30002840 - 30002670
Alignment:
Q  227 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac 326  Q
    ||||||||||| | ||||||||||| || | ||||| ||||  | ||||||||||||| || |||||||| |||  ||||||||||| || |||||||||    
T  30002840 ataaaggaaaactctatggtgaagtcattaaaatgatttttctggtgaagttaacactgtagcatcaaaagtgttgtgagtaacacctcactgtttgtac 30002741  T
Q  327 aatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | |||||| ||||||||| || || |||||||        |||| |||||||||| |||||||||||||||||||||||    
T  30002740 agtgacatcaaaagttcagtcttcttagtatc--------atcagattaacaagaatacacttaatctaattttatcct 30002670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 405
Target Start/End: Original strand, 33341397 - 33341571
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattg----taatgagtaacaccccaatgtttgtacaat 329  Q
    |||||| ||| ||||||| || ||||||| ||||  | |||| ||||||||||| |||||||||||    |   ||| ||||||||| |||||||||| |    
T  33341397 aaaattctatagtgaagtcatgagaatgatttttctggtgaaattaacactatatcatcaaaattgattgttgcgaggaacaccccactgtttgtacagt 33341496  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||| ||||||||| ||  ||||||||||||||||||||| |||||||||| || ||||||| ||||||||||||    
T  33341497 ggcatcaaaagttcagtcc-catagtatcatcaattcatcagattaacaagaatatacttaatataattttatcct 33341571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 229 - 334
Target Start/End: Original strand, 4205113 - 4205218
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| ||||||||||| |  | ||||||||||  ||||||||||||||||||| ||||||| |||  ||| |||||||||| |||||||||||    
T  4205113 aaaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttctgaataacaccccactgtttgtacaa 4205212  T
Q  329 tgacat 334  Q
    ||||||    
T  4205213 tgacat 4205218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 230 - 316
Target Start/End: Original strand, 4396324 - 4396410
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 316  Q
    |||||||||| ||| ||||||| |||| |||||||||||   |||||||||||||||||||| |||| |||||||||||||||||||    
T  4396324 aaggaaaattctatagtgaagtcataaaaatgacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacacccca 4396410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 405
Target Start/End: Complemental strand, 33816742 - 33816571
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| |||| | |||| || ||||||| ||||  | |||||| |||| | || |||||||| |||| |||||| |||| || | ||| |||  || ||    
T  33816742 aaaattatatgcttaagtcatgagaatgatttttctggtgaagtcaacattgtagcatcaaaagtgtagtgagtagcacctcactatttatacggtggca 33816643  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||||||||| ||  |||||||||||||||| |||| |||||||||| | |||||||||||||||||||||    
T  33816642 tcaaaagttcagtctccatagtatcatcaatttatcagattaacaagattgcacttaatctaattttatcct 33816571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 340 - 405
Target Start/End: Original strand, 1815409 - 1815474
Alignment:
Q  340 gttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||| || |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||    
T  1815409 gttcagtcctcatagtatcatcaattcatcatattaacaagactacatttactctaattttatcct 1815474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 316
Target Start/End: Original strand, 53124287 - 53124371
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 316  Q
    |||||||| |||| |||||| || | ||||| ||||| | ||||||||||||||||||||||||| | |||||||||||||||||    
T  53124287 ggaaaattatatgatgaagtcattaaaatgatttttttggtgaagttaacactataacatcaaaaatataatgagtaacacccca 53124371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 231 - 362
Target Start/End: Complemental strand, 35025800 - 35025669
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| |||| |||||| || | ||||| ||||  | |||||| ||||||||| |||||||| |||| |||||| ||||||| ||||| |||  ||    
T  35025800 aggaaaattctatgctgaagtcatgaaaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttatacgttg 35025701  T
Q  331 acattaaaagttcaatcatcatagtatcatca 362  Q
    |||| ||||||||| || || |||||||||||    
T  35025700 acatcaaaagttcagtcctcgtagtatcatca 35025669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 52516599 - 52516655
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataaca 290  Q
    |||||||||||||||||| || ||||||||||||  | |||||||||||||||||||    
T  52516599 aaaattttatggtgaagtcatgagaatgacttttatggtgaagttaacactataaca 52516655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 17272009 - 17272075
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 296  Q
    |||||||||| |||||||||||  |  |||||||||||  | |||||||||||||||||||||||||    
T  17272009 aaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaa 17272075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 402
Target Start/End: Original strand, 17272084 - 17272134
Alignment:
Q  352 tagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    ||||||||||||||||||| |||||  ||| ||||||||||||||||||||    
T  17272084 tagtatcatcaattcatcagattaatgagaatacacttaatctaattttat 17272134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 7152319 - 7152235
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccc 314  Q
    |||||||||| ||||||||||| ||   ||||||||||  | | ||||||||| ||||||||||||| | || ||||||||||||    
T  7152319 aaggaaaattctatggtgaagtcatgctaatgacttttctggtaaagttaacattataacatcaaaagtatagtgagtaacaccc 7152235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 52195687 - 52195645
Alignment:
Q  238 ttttatggtgaagttataagaatgactttttggatgaagttaa 280  Q
    ||||||||||||||||| ||||||||||||  |||||||||||    
T  52195687 ttttatggtgaagttatgagaatgacttttctgatgaagttaa 52195645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 23518473 - 23518425
Alignment:
Q  273 gaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 321  Q
    ||||||||||||||||||| |||| |||| ||| |||||||||| ||||    
T  23518473 gaagttaacactataacattaaaactgtagtgactaacaccccactgtt 23518425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 52102915 - 52102963
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 280  Q
    |||||||||||| |||||| | ||||||||||||||| | |||||||||    
T  52102915 ggaaaattttattgtgaagatttaagaatgacttttttggtgaagttaa 52102963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 222 - 405
Target Start/End: Original strand, 32267020 - 32267203
Alignment:
Q  222 ataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 321  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  32267020 ataaaataaaggaaaattttatggtgaagtcataagaatgactttttttgtgaagttaacaatataacatcaaaaatgtaatgagtaacaccccactgtt 32267119  T
Q  322 tgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||||||||| ||||||||| || ||||| |||||||||  ||||| |||||||||| |||||||||||||||||||||||    
T  32267120 tgtacaatgacatcaaaagttcactcctcatattatcatcaacccatcagattaacaagattacacttaatctaattttatcct 32267203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 15382927 - 15383102
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| |||||||||||||||| ||||||||||| | |||| |||||||||||||||||||| |||||||||||||| ||||  |||||||||||    
T  15382927 aaggaaaattctatggtgaagttataaaaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatcccaccgtttgtacaat 15383026  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||| ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15383027 gtcatcaaaagttcagtcatcgtagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 15383102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 242 - 403
Target Start/End: Complemental strand, 28564951 - 28564790
Alignment:
Q  242 atggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagt 341  Q
    ||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||| ||||||    
T  28564951 atggtgaagttatgaaaatgatttttttgatgaagttaacactataacatcaaaaatgtaatgagtaacaccttactgtttgtacaatgacatcaaaagt 28564852  T
Q  342 tcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28564851 tcagtcctcatagtatcatcaattcatcatattaacaagactacacttaatctaattttatc 28564790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 233 - 403
Target Start/End: Original strand, 10922724 - 10922894
Alignment:
Q  233 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    ||||||||||||||||| | || ||||||| ||||| | |||||||||||||||||||| |||| |||||||||||| |||||| |||||||||||||||    
T  10922724 gaaaattttatggtgaaatcatgagaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaagaccccactgtttgtacaatgac 10922823  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    || |||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  10922824 atcaaaagttcaatcctcatagtatcatcaactcatcagattaacaagactacacttaatcttattttatc 10922894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 231 - 405
Target Start/End: Original strand, 18422646 - 18422820
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| |||| ||||||||||| | ||||||||||||||||||||||||| | ||| |||||||||||||  ||||||||||||    
T  18422646 aggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacaccccaccgtttgtacaatg 18422745  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||| || ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  18422746 acatcaaaagttcagtcctcataatatcatcaattcatcagattaacaagattacacttaatctaattttatcct 18422820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 231 - 405
Target Start/End: Original strand, 30254419 - 30254592
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||| || | | |||||||||||||    
T  30254419 aggaaaattctatggtgaagttataagaatgacttttttgttgaagttaacaatataacatcaaaaatgtaatgagtaatacac-actgtttgtacaatg 30254517  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||| || ||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  30254518 acatcaaaagttcagtcctcaaagtatcatcaattcatcagattaacaagactagacttaatctaattttatcct 30254592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 234 - 405
Target Start/End: Original strand, 15752027 - 15752198
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| ||||||||||| || ||||||||||||| | |||||||||||||||||||| |||| | || ||||||||||| || ||||||||||||| ||    
T  15752027 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatatagtgagtaacacctcactgtttgtacaatggca 15752126  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15752127 tcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 15752198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 229 - 405
Target Start/End: Complemental strand, 37619079 - 37618899
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagt--aacaccccaatgtttgtac 326  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | ||||||||  ||||||||| ||||||||     
T  37619079 aaaggaaaattctatggtgaagttataagaatgacttttttggtgaagttaacactataacatcaaaaatttaatgagtaaaacaccccactgtttgtaa 37618980  T
Q  327 aatgacattaaaagttcaatcatcatag--tatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||||| ||||||||| |  ||||||  |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  37618979 aatgacatcaaaagttcagttctcatagtatatcatcaattcatcagattaacaatactacacttaatctaattttatcct 37618899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 231 - 405
Target Start/End: Original strand, 2959743 - 2959917
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| || | ||||||||||  ||||||||||||||||||||||||||| |||| | ||||||| |||| |||||||||| ||    
T  2959743 aggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtaagtaacatcccactgtttgtacagtg 2959842  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||| || ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  2959843 acatcaaaagttcagtcctcatagtgtcatcaattcatcagattaacaagaccacacttaatctaattttatcct 2959917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 258 - 403
Target Start/End: Complemental strand, 9903208 - 9903063
Alignment:
Q  258 aatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtat 357  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||| |||||| ||||||||||||  |||| |||    
T  9903208 aatgacttttttgatgaagttaacactataacatcaaaactgtagtgagtaacaccccgctgtttgtacagtgacatcaaaagttcaatccacatactat 9903109  T
Q  358 catcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  9903108 catcaattcatcaaattaacaagactacacttaatctaattttatc 9903063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 231 - 403
Target Start/End: Complemental strand, 19899950 - 19899778
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| |||| ||||| ||||| | ||||||||||||||||||||||||| ||||| |||||||||| || |||||||| ||||    
T  19899950 aggaaaattctatggtgaagtcataataatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacctcactgtttgtagaatg 19899851  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
     ||| |||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  19899850 gcatcaaaagttcaaccctcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatc 19899778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 16415639 - 16415815
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaa-tgtttgtacaa 328  Q
    |||||||||| || |||||||| || ||||||||||||  | |||||||||||||||| |||||||| |||| |||||||||||| || ||||||||||     
T  16415639 aaggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccctaaatgtttgtacag 16415738  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || ||| |||||||||  |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  16415739 tggcatcaaaagttcagccatcatagtatcatcaattcattagattaacaagactacacttaatctaattttatcct 16415815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 229 - 404
Target Start/End: Complemental strand, 34012560 - 34012385
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| ||||||||||| || | |||||| |||  ||||||||||||||||||||||||| | |||| |||||||||| ||| |||||||| |     
T  34012560 aaaggaaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaag 34012461  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcc 404  Q
    || ||| ||||||||| |||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  34012460 tggcatcaaaagttcagtcatcatactatcatcaattcatcagattaacaagattacacttaatctaattttatcc 34012385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 232 - 410
Target Start/End: Original strand, 38823210 - 38823388
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || ||||||||||||  | | |||||||||||||| ||||||||||||   ||||||||||||| | |||||||| ||     
T  38823210 ggaaaattctatggtgaagtcatgagaatgacttttctggttaagttaacactatagcatcaaaattgttgcgagtaacaccccactatttgtacagtgt 38823309  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctccttt 410  Q
    ||| ||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  38823310 catcaaaagttcaatccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctacttt 38823388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 229 - 411
Target Start/End: Original strand, 48620630 - 48620812
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| |||| ||||||||| | ||||||||||    ||||||||||| ||||||||||||| |||  |||||||||||||| ||||||||||     
T  48620630 aaaggaaaattctatgttgaagttattaaaatgacttttcttgtgaagttaacaatataacatcaaaagtgttgtgagtaacaccccactgtttgtacag 48620729  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 411  Q
    |||||| ||||||||| ||  | ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  48620730 tgacatcaaaagttcagtccccttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctactttg 48620812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 30327132 - 30326959
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||| ||||||| |||| |||||||||||   |||| |||||||||||||||||||| |||||||||||| |||| |  |||||||||||      
T  30327132 ggaaaattctatagtgaagtcataaaaatgactttttttgtgaatttaacactataacatcaaaaatgtaatgagtaatacccaaccgtttgtacaatag 30327033  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  30327032 catcaaaagttcagtcatcatagtatcatcaattcatcagattaacaaaactacacttaatctcattttatcct 30326959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 242 - 403
Target Start/End: Original strand, 37451292 - 37451452
Alignment:
Q  242 atggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagt 341  Q
    |||||||||| |||| ||||||||||| | | ||||||||||||||||||||||| |||||| |||||||||| |  |||||||||||||||| ||||||    
T  37451292 atggtgaagtcataaaaatgacttttttggtaaagttaacactataacatcaaaaatgtaataagtaacaccctaccgtttgtacaatgacatcaaaagt 37451391  T
Q  342 tcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||| || || |||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  37451392 tcagtcctc-tagtatcatcaatttatcatattaacaagactacacttaatctaattttatc 37451452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 232 - 403
Target Start/End: Original strand, 23999343 - 23999514
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||||||||||||||| |||||||||| ||||| | |||||||||||||| ||||| |||| | ||| ||||||||||||| | |||||| |||||    
T  23999343 ggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactacaacataaaaaatataacgagtaacaccccactatttgtagaatga 23999442  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||| |||||||||  | ||||||||| ||||||||||||  |||||||||||||||||||| ||||||||||    
T  23999443 catcaaaagttcagccctcatagtattatcaattcatcaggttaacaagactacacttaatataattttatc 23999514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 272 - 403
Target Start/End: Original strand, 51128895 - 51129026
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 371  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||  |||||||||||||||| ||||||||| |||| ||||||||||||||||||||     
T  51128895 tgaagttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtacaatgacatcaaaagttcagtcattatagtatcatcaattcatcat 51128994  T
Q  372 attaacaagactacacttaatctaattttatc 403  Q
    ||||||||||||||||||||| ||||||||||    
T  51128995 attaacaagactacacttaatataattttatc 51129026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 221 - 403
Target Start/End: Complemental strand, 27763500 - 27763320
Alignment:
Q  221 aataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgt 320  Q
    |||||||  ||| |||| |||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||||  | ||    
T  27763500 aataaaaataagaaaaaatttatggtaaagttataagaatgatttttttg-tgaagttaacactataacatcaaaaatgtaatgagtaacacccata-gt 27763403  T
Q  321 ttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||||| |||||||| |||||| ||  | ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  27763402 ttgtagaatgacatcaaaagtccagccctcatagtatcatcaatttatcaggttaacaagactacacttaatctaattttatc 27763320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 234 - 403
Target Start/End: Original strand, 28769651 - 28769819
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| ||||||||||| |||| ||| |||||||   ||||||||||||||| ||||||||| ||||||||||||||||| |  |||||||||||| ||    
T  28769651 aaaattctatggtgaagtcataaaaataactttttttgtgaagttaacactatgacatcaaaaatgtaatgagtaacaccc-accgtttgtacaatggca 28769749  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | ||| ||||  || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28769750 tcaaaggttcggtcctcatagtatcatcaattcatcatattaacaagactacacttaatctaattttatc 28769819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 42721035 - 42721208
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || | ||||| ||||| | |||||||| | ||||| ||| |||| | || |||||||||||||| |||||||||| | |    
T  42721035 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttagccctatatcataaaaaatatagtgagtaacaccccactgtttgtacagtaa 42721134  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42721135 catcaaaagttcaatccccatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 42721208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 245 - 405
Target Start/End: Original strand, 4330288 - 4330450
Alignment:
Q  245 gtgaagttataagaatgactttttggatgaagttaa-cactataacatcaaaattgtaatgagtaacacccc-aatgtttgtacaatgacattaaaagtt 342  Q
    |||||||||| ||||||||||||  ||||||| ||| ||||||| |||||||| |||| ||||||||||||| |||||||||||| ||  || |||||||    
T  4330288 gtgaagttatgagaatgacttttctgatgaagataaacactatagcatcaaaagtgtagtgagtaacacccccaatgtttgtacagtgggatcaaaagtt 4330387  T
Q  343 caatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || |||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  4330388 cagtcatcatagtatcatcaatttatcagattaacaagactgcacttaatctaattttatcct 4330450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 7079254 - 7079070
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaat-----------gt 320  Q
    ||||||||||||||| |||| || | ||||||||||| | ||||||||||||||||| ||||||| |||  |||||||||||||| |           ||    
T  7079254 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactaacacctcactgt 7079155  T
Q  321 ttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  7079154 ttgtacaatgacatcaaaagttcagtcatcatagtatcatcaattcatcaaattaacaagaatacacttaatctaattttatcct 7079070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 229 - 403
Target Start/End: Complemental strand, 11742533 - 11742360
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||||||| |||||||||| ||||||||||||  | ||||||||||||||||  ||||||| |||  | |||||||||||| ||||||||||     
T  11742533 aaaggaaaattttatcgtgaagttatgagaatgacttttctggtgaagttaacactatattatcaaaagtgttgtaagtaacaccccactgtttgtacag 11742434  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||||| ||||||||| ||  |||| |||||||||||||||  |||||||||| |||||||||||||||||||||    
T  11742433 tgacatcaaaagttcagtc-ccataatatcatcaattcatcggattaacaagaatacacttaatctaattttatc 11742360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 8222125 - 8222297
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| || |||||||| |||| |||||| ||||   ||||||||||||||||||||||||| |||||||||||||||| ||  ||   ||||||    
T  8222125 aaggaaaattctacggtgaagtcataaaaatgacctttttagtgaagttaacactataacatcaaaaatgtaatgagtaacaccacaccgt---tacaat 8222221  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||| ||||||||| |  |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  8222222 ggcatcaaaagttcagttctcatagtatcatcaattcatcatattaacaagactacacttaatctcattttatcct 8222297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 234 - 411
Target Start/End: Original strand, 41926161 - 41926338
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| |||||||||||||| | ||||| ||||| ||||||||||| ||||||||||||||| | || ||||||| | |||| |||||||||| || ||    
T  41926161 aaaattctatggtgaagttatgaaaatgatttttttgatgaagttaatactataacatcaaaaatatagtgagtaatatcccactgtttgtacagtggca 41926260  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 411  Q
    | | ||||||| ||   |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  41926261 tcacaagttcagtccctatagtatcatcaattcatcagattaacaagattacacttaatctaattttatcctactttg 41926338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 232 - 400
Target Start/End: Original strand, 3309144 - 3309311
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||||| |||| || ||||||||||||  | | ||||||||||||||||||||||| |||  |||||||||||| | |||||||||| ||     
T  3309144 ggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaacactataacatcaaaagtgttgtgagtaacaccc-actgtttgtacagtgg 3309242  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
     || |||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  3309243 tatcaaaagttcaatcttcatagtatcatcaattcatcagattaacaagaatacacttaatctaatttt 3309311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 238 - 405
Target Start/End: Original strand, 47279191 - 47279358
Alignment:
Q  238 ttttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaa 337  Q
    |||| ||||||||| || ||||||| ||||| | ||||||||||| ||||  ||||||| |||  |||||||||||||| |||||||||| || |||  |    
T  47279191 ttttttggtgaagtcatgagaatgatttttttggtgaagttaacattatactatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcga 47279290  T
Q  338 aagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||| || |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  47279291 aagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 47279358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 10182189 - 10182015
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| || | ||||||||||| | ||||||||| ||| |||||| |||| | || || ||||||| ||| |||||||||| ||    
T  10182189 aggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactgtaacataaaaaatatagtgcgtaacacgccactgtttgtacagtg 10182090  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     ||| ||||||||| || |||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||    
T  10182089 gcatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacaagattacacttaatctaattttatcct 10182015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 234 - 403
Target Start/End: Original strand, 46931406 - 46931578
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggat---gaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    |||||| |||||||||||||||||||||| |||||   |   |||||||||||||||||||||||| |||||||||||| |||||| |||||||| || |    
T  46931406 aaaattctatggtgaagttataagaatgaattttttttttgtgaagttaacactataacatcaaaaatgtaatgagtaataccccactgtttgtagaacg 46931505  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
     ||| |||| ||||  | ||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  46931506 gcatcaaaaattcagccctcataatatcatcaattcatcaggttaacaagactacacttaatataattttatc 46931578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 233 - 405
Target Start/End: Original strand, 14758038 - 14758210
Alignment:
Q  233 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    |||||||||| |||||||| || ||||||||||||  | |||||| |||||||||||||||||| |||| |||||| ||| | | |||||||||  || |    
T  14758038 gaaaattttacggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcacacaactgtttgtacggtggc 14758137  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || ||||||||| ||  |||||| |||||||||||| | |||||||||||| |||||||||||||||||||||    
T  14758138 atcaaaagttcagtccccatagtttcatcaattcattagattaacaagactgcacttaatctaattttatcct 14758210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 232 - 399
Target Start/End: Complemental strand, 27267376 - 27267212
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||| |||||| || ||||||| ||||| | ||||||||||||||   ||| |||| |||| ||||| |||||||| |||||||||| ||     
T  27267376 ggaaaattatatg-tgaagtcatgagaatgatttttttggtgaagttaacactag--cataaaaaatgtagtgagtgacaccccactgtttgtacagtgg 27267280  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattt 399  Q
    ||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27267279 cattaaaagttcagtctccatagtatcatcaattcatcagattaacaagactacacttaatctaattt 27267212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 400
Target Start/End: Original strand, 39393375 - 39393547
Alignment:
Q  228 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 327  Q
    |||||||||||| || ||||||||||| ||||||||||||   ||||||||||||||||| |||||||| |||  ||||||| ||  || ||||||||||    
T  39393375 taaaggaaaattctacggtgaagttatgagaatgacttttctaatgaagttaacactatagcatcaaaagtgttgtgagtaatacttcattgtttgtaca 39393474  T
Q  328 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
     || ||| ||||||| ||||  ||||||||||| ||||||||| |||||||||| ||||||| ||||||||||    
T  39393475 gtggcatcaaaagtttaatccccatagtatcataaattcatcagattaacaagaatacacttcatctaatttt 39393547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 272 - 405
Target Start/End: Original strand, 32216091 - 32216224
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 371  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||| ||||||||||||| | | ||||||||| || || ||||||||||||||||| |     
T  32216091 tgaagttaacactataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatggcgtcaaaagttcagtcctcgtagtatcatcaattcattag 32216190  T
Q  372 attaacaagactacacttaatctaattttatcct 405  Q
    |||||||| |||| |||||||| |||||||||||    
T  32216191 attaacaaaactaaacttaatcaaattttatcct 32216224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 248 - 405
Target Start/End: Complemental strand, 27533144 - 27532988
Alignment:
Q  248 aagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatc 347  Q
    ||||||| ||||||||||||  | |||||||||||||||| |||||||| | |  || |||||| |||| | |||||||| || ||| ||||||||||||    
T  27533144 aagttatgagaatgacttttctggtgaagttaacactatagcatcaaaagtattgtgggtaacaacccactctttgtacagtggcatcaaaagttcaatc 27533045  T
Q  348 atcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
      ||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  27533044 cccatagtatcatcaattcatcagattaacaagaatacacttaatc-aattttatcct 27532988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 31621733 - 31621560
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| || |||||||| || ||||||||||||    |||||| |||||||||||||||||  |||| |||||| ||||||  | |||||||  ||     
T  31621733 ggaaaattctacggtgaagtcatgagaatgacttttctagtgaagtcaacactataacatcaaaggtgtattgagtagcaccccgctatttgtacggtgg 31621634  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| |||| |||| ||  ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  31621633 catcaaaaattcagtccccatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcct 31621560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 232 - 402
Target Start/End: Complemental strand, 47682673 - 47682504
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacac-cccaatgtttgtacaatg 330  Q
    |||||||||||||||||||| || ||| ||||||||| | ||||||||||||||   ||| |||| |||  |||||||||| |||| || ||||||| ||    
T  47682673 ggaaaattttatggtgaagtcatgagagtgacttttttggtgaagttaacactag--cataaaaaatgttgtgagtaacactcccactgcttgtacagtg 47682576  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
      || ||||||||| || |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||    
T  47682575 gtatcaaaagttcattcctcatagtatcatcaattcatcagattaacaagactacatttaaactaattttat 47682504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 234 - 405
Target Start/End: Complemental strand, 27564084 - 27563912
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttgga-tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    |||||| || ||||||||||| | ||||| |||||  | |||||||||||||||||| | |||| | || |||||||||| ||| |||||||| | ||||    
T  27564084 aaaattctacggtgaagttatgaaaatgattttttttagtgaagttaacactataactttaaaaatatagtgagtaacactccactgtttgtatagtgac 27563985  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || ||||||||| |    ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  27563984 atcaaaagttcagttccgataatattatcaattcatcagattaacaagactacacttaatctaattttatcct 27563912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 27227657 - 27227492
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || ||||||| ||||| | ||||||||||||||   ||| |||| |||| |      |||| || |||||||||| ||     
T  27227657 ggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactag--cataaaaaatgtact------cacctcactgtttgtacagtgg 27227566  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| || |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  27227565 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagattacacttaatctaattttatcct 27227492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 229 - 411
Target Start/End: Original strand, 1547280 - 1547454
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| ||||||||||| || ||||||||||||  | |||||||||||||||||||| |||| |||  |||||||||| ||| ||||||| ||     
T  1547280 aaaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgttgtgagtaacactccactgtttgtgcag 1547379  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 411  Q
    || ||| ||||||||| |  ||||||||        |||||| |||||||| | ||||||||||||||||||||||| |||||    
T  1547380 tggcatcaaaagttcagttctcatagta--------tcatcagattaacaaaaatacacttaatctaattttatcctactttg 1547454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 405
Target Start/End: Original strand, 3534968 - 3535101
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 371  Q
    ||||||||||||||||||||||||| |||  |||||||||||  | ||||||| || |||||| ||||||||| ||  | || ||| ||||||||||||     
T  3534968 tgaagttaacactataacatcaaaagtgttgtgagtaacaccttactgtttgtgcagtgacatcaaaagttcagtccccttaatattatcaattcatcag 3535067  T
Q  372 attaacaagactacacttaatctaattttatcct 405  Q
    |||||||||| |||| ||||||||||||||||||    
T  3535068 attaacaagaatacatttaatctaattttatcct 3535101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 231 - 331
Target Start/End: Original strand, 30254853 - 30254952
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||  ||||| |||| |||||||||||||    
T  30254853 aggaaaattctatggtgaagtcataataatgacttttttgatgaagttaacactataacatcaaaaatgtaatggataaca-cccactgtttgtacaatg 30254951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 402
Target Start/End: Complemental strand, 238697 - 238523
Alignment:
Q  227 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac 326  Q
    |||||| |||||| ||| ||||||| |  | ||| ||||||| | ||||||||||||||||  || |||| |||  ||||||||| || | |||||||||    
T  238697 ataaagaaaaattctatagtgaagtcacgaaaataacttttttggtgaagttaacactatagtattaaaaatgttgtgagtaacatcc-actgtttgtac 238599  T
Q  327 aatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    |||||||| ||||||||| ||  |||||||||| ||||| |||| | |||||||| ||||||||||||||||||||    
T  238598 aatgacatcaaaagttcagtccccatagtatcaacaattaatcagactaacaagaatacacttaatctaattttat 238523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 228 - 405
Target Start/End: Original strand, 15168081 - 15168265
Alignment:
Q  228 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 327  Q
    |||||||||||| ||| ||||||| || ||||||  ||||  | |||||| ||||||||| |||||||| |||| |||||| ||||||| |||||||||     
T  15168081 taaaggaaaattctatcgtgaagtgatgagaatgctttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttgtacg 15168180  T
Q  328 atga-------cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     ||        ||| ||||||||| ||  ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||    
T  15168181 ttgtacggtggcatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagactgcagttaatctaattttatcct 15168265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 405
Target Start/End: Original strand, 40884849 - 40884982
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 371  Q
    |||||| ||||| |||||||||||| |||| |||||| ||||||| |||||||||  || ||| ||||||||| ||   |||||||| |||||||||||     
T  40884849 tgaagtcaacaccataacatcaaaagtgtagtgagtagcaccccactgtttgtacggtggcatcaaaagttcagtccctatagtatcttcaattcatcag 40884948  T
Q  372 attaacaagactacacttaatctaattttatcct 405  Q
    |||||||||| | ||||||||||| |||||||||    
T  40884949 attaacaagattgcacttaatctagttttatcct 40884982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 405
Target Start/End: Original strand, 25160715 - 25160801
Alignment:
Q  319 gtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||||||||| ||| ||||||||| || |||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||    
T  25160715 gtttgtacaatggcatcaaaagttcagtcctcatagtatcatcaattcattagattaataagactacacttaatctcattttatcct 25160801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 401
Target Start/End: Complemental strand, 33725778 - 33725611
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| |||||| |||| |  ||||||||||||    |||||| ||| ||||| |||||||| |||| |||||| || |||| | ||| |    || ||    
T  33725778 aaaattctatggtaaagtcaagagaatgacttttctagtgaagtcaacgctatatcatcaaaagtgtattgagtagcagcccactatttctttggtggca 33725679  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 401  Q
    | ||||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  33725678 tcaaaagttcagtcctcatagtatcatcaattcatcatattaacaagactgcacttaatctaatttta 33725611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 380
Target Start/End: Original strand, 21289661 - 21289816
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaa-------aattgtaatgagtaacaccccaatgtttgt 324  Q
    |||||| | ||| ||||||| || ||||||||||||  | |||||||||||||||| ||| ||       || |||| |||||||||||||| |||||||    
T  21289661 ggaaaaatctattgtgaagtcatgagaatgacttttctggtgaagttaacactatatcataaataataaaaaatgtagtgagtaacaccccactgtttgt 21289760  T
Q  325 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaag 380  Q
    ||| || ||| ||||||||| ||   |||||||||||||||||||| |||||||||    
T  21289761 acagtggcatcaaaagttcagtccctatagtatcatcaattcatcagattaacaag 21289816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 22170745 - 22170814
Alignment:
Q  227 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 296  Q
    ||||||||||||| ||||||||| | || | ||||||||||   ||||||||||||||||||||||||||    
T  22170745 ataaaggaaaattctatggtgaaatcatgaaaatgacttttctaatgaagttaacactataacatcaaaa 22170814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 405
Target Start/End: Original strand, 22170806 - 22170880
Alignment:
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||| ||  |||| |||||||||||||| | ||||| || ||||||||||||||||||| |||||    
T  22170806 acatcaaaagttcagtctacataatatcatcaattcattagattaataacactacacttaatctaatttcatcct 22170880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 4964102 - 4964062
Alignment:
Q  225 aaataaaggaaaattttatggtgaagttataagaatgactt 265  Q
    ||||||||||||||| |||||||||||||| ||||| ||||    
T  4964102 aaataaaggaaaattctatggtgaagttatgagaattactt 4964062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 403
Target Start/End: Original strand, 38759652 - 38759700
Alignment:
Q  355 tatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||||||||||||||| ||||| || |||||| ||||| ||||||||||    
T  38759652 tatcatcaattcatcatattaataaaactacatttaatttaattttatc 38759700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 5e-63; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 1150297 - 1150123
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| |||||||||||||||| | |||||||||| |||||||||||||| |||||||||||||| |||| ||||||||||| |    
T  1150297 aggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacgctataacatcaaaaatgtaatgagtaacatcccactgtttgtacaacg 1150198  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  1150197 acatcaaaagttcagtcatcatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcct 1150123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 10555393 - 10555220
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| || |||||||| || ||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||| ||| ||||||||||||||    
T  10555393 ggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacactccactgtttgtacaatga 10555294  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10555293 catcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 10555220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 230 - 405
Target Start/End: Complemental strand, 43643788 - 43643613
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| || ||||||||| ||| | ||||||||||||||||||||||||| ||||||||||||||| | | ||||||||||||    
T  43643788 aaggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaat 43643689  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||  ||||||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||    
T  43643688 gacatccaaagttcaatcttcatagtatcatcaactcatcagattaacaagactacacttgatctaattttatcct 43643613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 241 - 405
Target Start/End: Complemental strand, 37970701 - 37970537
Alignment:
Q  241 tatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaag 340  Q
    ||||||||||| || ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||| |||||    
T  37970701 tatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgccatcaaaag 37970602  T
Q  341 ttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||  | ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  37970601 ttcagccctcatagtatcatcaattcatatgattaacaagactacacttaatctaattttatcct 37970537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 231 - 403
Target Start/End: Complemental strand, 27083030 - 27082858
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| || ||| ||||||||  | |||||||||||||||| |||||||| |||| |||||||||||||| ||||||| || ||    
T  27083030 aggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccccactgtttgtgcagtg 27082931  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
     ||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27082930 gcattaaaagttcagtcctcatagtatcatcaattcatcaaattaacaagactacacttaatctaattttatc 27082858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 228 - 404
Target Start/End: Original strand, 34894962 - 34895138
Alignment:
Q  228 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 327  Q
    |||||||||||| ||||||||||| || | ||||||||||  ||||||||||||||||||||||||| | |||| |||||||||| ||| |||||||| |    
T  34894962 taaaggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaa 34895061  T
Q  328 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcc 404  Q
     || ||| ||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34895062 gtggcatcaaaagttcagtcatcatactatcatcaattcatcagattaacaagactacacttaatctaattttatcc 34895138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 229 - 403
Target Start/End: Original strand, 1204923 - 1205097
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    |||||||||||||| |||||||| || ||||||||||||  | |||||||||||||||||||| |||| |||| ||||||||||  || |||||||||||    
T  1204923 aaaggaaaattttacggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgtagtgagtaacacatcactgtttgtacaa 1205022  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||||| ||||||||| || |||||||||||||| ||||||| |||||||||| |||||||||||||||||||||    
T  1205023 tgacatcaaaagttcagtcctcatagtatcatcagttcatcatattaacaagattacacttaatctaattttatc 1205097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 16447067 - 16446893
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| || | ||||||||||  ||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||    
T  16447067 aggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtataatg 16446968  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     ||| ||||||| | ||  |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  16446967 gcatcaaaagtttagtccccatactatcatcaattcatcagattaacaagactacacttaatttaattttatcct 16446893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 231 - 401
Target Start/End: Complemental strand, 30654775 - 30654605
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||||||||||||||| |||||| ||| ||||| | |||||||||||||||||||| |||| ||||||||||||||||||| |||||||  ||||    
T  30654775 aggaaaattttatggtgaagtcataagagtgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgttgaatg 30654676  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 401  Q
    |||| |||||||||  | |||||||||||||| |||||||  |||||||||||||||||||| ||||||||    
T  30654675 acatcaaaagttcagccttcatagtatcatcacttcatcaggttaacaagactacacttaatttaatttta 30654605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 230 - 405
Target Start/End: Complemental strand, 36695159 - 36694984
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| |  | ||||||||||  ||||||||||||||||||| ||||||| |||  |||||||||||||| ||||||||||||    
T  36695159 aaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttgtgagtaacaccccactgtttgtacaat 36695060  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||| ||||||||| ||  ||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||    
T  36695059 gacatcaaaagttcagtccccatagtatcatcaattcatcagactaagaagaatacacttaatctaattttatcct 36694984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 245 - 403
Target Start/End: Complemental strand, 31934064 - 31933906
Alignment:
Q  245 gtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttca 344  Q
    |||||||||| ||||||| ||||| | ||||||||||||||| | ||||||| | ||||||||||||||||| | ||| ||||||||||| |||||||||    
T  31934064 gtgaagttatgagaatgatttttttggtgaagttaacactatgatatcaaaaatataatgagtaacaccccactctttatacaatgacatcaaaagttca 31933965  T
Q  345 atcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
     |||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  31933964 gtcattatagtatcatcaattcatccgattaacaagactacacttaatctaattttatc 31933906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 6098716 - 6098536
Alignment:
Q  225 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 324  Q
    |||||| |||||||| ||||||||||| || | ||| ||||||| | ||||||||| |||||| |||||||| | || |||||||||||||| |||||||    
T  6098716 aaataatggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactatagcatcaaaaatatagtgagtaacaccccactgtttgt 6098617  T
Q  325 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| |||||| ||||||||| ||  ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  6098616 acagtgacatcaaaagttcagtccccatagtatcgtcaattcatcagattaacaagactacatttaatctaattttatcct 6098536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 244 - 403
Target Start/End: Complemental strand, 23854610 - 23854451
Alignment:
Q  244 ggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttc 343  Q
    |||||||| || ||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||| ||||||||| ||||||||    
T  23854610 ggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacccaactgtttgtgcaatgacatcaaaagttc 23854511  T
Q  344 aatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | || ||||||||||||||| |||| | |||||||| |||||| ||||||||||||||||    
T  23854510 agtcctcatagtatcatcaactcattagattaacaatactacaattaatctaattttatc 23854451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 38643975 - 38644150
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||| | || ||||||||||||| | | ||||||||||||||||||||||| |||  |||||||||||||| |||||||  | |    
T  38643975 aaggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtctagt 38644074  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||| ||||||||| ||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  38644075 ggcatcaaaagttcagtctccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 38644150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 232 - 410
Target Start/End: Original strand, 13307622 - 13307800
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||| |||  ||||||||||| || | |||||||| |||    
T  13307622 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacctcactatttgtacagtga 13307721  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctccttt 410  Q
    ||| ||||||||| ||  |||||||| |||||||||||| |||| ||||| ||||||||||||||||||||||| ||||    
T  13307722 catcaaaagttcagtccccatagtattatcaattcatcagattagcaagaatacacttaatctaattttatcctacttt 13307800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 234 - 403
Target Start/End: Original strand, 465843 - 466012
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||||||||||||||| || | ||||||||||  | |||||||||||| |||||||||||| |||  |||||||||||||| |||||||||| || ||    
T  465843 aaaattttatggtgaagtcattaaaatgacttttgtggtgaagttaacacgataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtggca 465942  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | |||| |||| ||  | ||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  465943 tcaaaaattcagtccccttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatc 466012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 12876108 - 12876281
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||||| |||| |  | ||||||||||  ||||||||||||||||||| || |||| |||  |||||||||||| | ||||||||||||||    
T  12876108 ggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaacactataatataaaaaatgttgtgagtaacacccaactgtttgtacaatga 12876207  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| || |||||||||||||||||||||| ||||| |||  |||||||||||||||||||||||    
T  12876208 catcaaaagttcagtcctcatagtatcatcaattcatcagattaagaaggatacacttaatctaattttatcct 12876281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 232 - 404
Target Start/End: Complemental strand, 5300137 - 5299965
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || |||||||||||||  ||||||||||||||||| |||||||| |||  | |||| ||| | | |||||||||| ||     
T  5300137 ggaaaattctatggtgaagtcatgagaatgacttttttaatgaagttaacactatagcatcaaaagtgttgtaagtagcactctactgtttgtacagtgg 5300038  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcc 404  Q
    ||| ||||||||| || | |||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  5300037 catcaaaagttcagtccttatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcc 5299965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 16222860 - 16223035
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| || |||||| | || ||||||||||||  | |||| ||||||||||||||| |||| | || ||||||   |||||  |||||||||||    
T  16222860 aaggaaaattctacggtgaaatcatgagaatgacttttctggtgaatttaacactataacataaaaaatatagtgagtagttccccacagtttgtacaat 16222959  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||| ||||||||| || |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  16222960 gacatcaaaagttcagtcctcatagtatcatcaattcatccgattaacaagactacacttaatctaattttatcct 16223035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 11727037 - 11727196
Alignment:
Q  246 tgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaa 345  Q
    ||||||||| ||||||| ||||| | ||||||||||||||||||||||||| |||  | |||||||||||| | |||||| | || ||| |||||||||     
T  11727037 tgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaagtgttgtaagtaacaccccactatttgtatagtggcatcaaaagttcag 11727136  T
Q  346 tcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || ||||| |||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  11727137 tcctcataatatcatcaattcatcaaattaacaagaatacatttaatctaattttatcct 11727196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 293 - 403
Target Start/End: Complemental strand, 1149762 - 1149652
Alignment:
Q  293 aaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaat 392  Q
    |||| |||||||||||||| |||| ||||||||||||||||| ||||||||  || ||||||||||||||| |||||| |||||||||||||||||||||    
T  1149762 aaaaatgtaatgagtaacaacccactgtttgtacaatgacatcaaaagttctgtcctcatagtatcatcaactcatcagattaacaagactacacttaat 1149663  T
Q  393 ctaattttatc 403  Q
    |||||||||||    
T  1149662 ctaattttatc 1149652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 405
Target Start/End: Original strand, 9864144 - 9864320
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| |||  |||||| |  | ||||||||||| | |||| |||||||||||  ||||||| |||  |||||||||||||| |||||||||||    
T  9864144 aaaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaa 9864243  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||| ||||||||| ||  |||| |||||||||||||||| | ||| |||| |||||||||| ||||||||||||    
T  9864244 tgacatcaaaagttcagtccccataatatcatcaattcatcagactaataagaatacacttaatataattttatcct 9864320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 231 - 411
Target Start/End: Complemental strand, 34952223 - 34952043
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||| || |||| || | ||||||||||  | | |||||||||||||| |||||||| |||  ||||||||| |||| |||||||||| ||    
T  34952223 aggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaacactatatcatcaaaagtgttgtgagtaacagcccactgtttgtacagtg 34952124  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 411  Q
    |||| ||||||||| ||    ||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| |||||    
T  34952123 acatcaaaagttcagtccctttagtatcatcaattcatcaaattaataagaatacacttaatctaattttatcctactttg 34952043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 232 - 403
Target Start/End: Original strand, 41362517 - 41362685
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||||||||||||| | ||||||||||| | ||||||||||||||   ||| ||||| ||| |||||||||||||| | |||||| | |||    
T  41362517 ggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaacactag--cataaaaat-gtagtgagtaacaccccactatttgtatagtga 41362613  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||| |||||||||  | |||||||||||||||||||||| ||||||||||||| |||| || ||||||||||    
T  41362614 catcaaaagttcagacctcatagtatcatcaattcatcagattaacaagactaaacttgatataattttatc 41362685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 232 - 400
Target Start/End: Original strand, 44869495 - 44869664
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatg--agtaacaccccaatgtttgtacaat 329  Q
    |||||||| || |||||| |||||||||| ||||||| | |||||||||||||||||||| |||| | |  ||  ||| |  ||||| |||||| |||||    
T  44869495 ggaaaattctacggtgaaattataagaataacttttttggtgaagttaacactataacattaaaagtattttgtgagtgat-ccccactgtttgcacaat 44869593  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
    ||||| |||||||||||| ||||||||||||||||| |||| |||||||| | ||||||||||||||||||    
T  44869594 gacatcaaaagttcaatcgtcatagtatcatcaatttatcagattaacaataatacacttaatctaatttt 44869664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 321 - 411
Target Start/End: Complemental strand, 35459813 - 35459723
Alignment:
Q  321 ttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 411  Q
    |||||||||||||||||||||||| || ||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||    
T  35459813 ttgtacaatgacattaaaagttcagtcctcataatatcatcaactcatcagattaacaagactacacttaatctaattttatcctactttg 35459723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 231 - 403
Target Start/End: Complemental strand, 8803998 - 8803837
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| |||    ||||||||| | ||||||||||||||||||||||||| ||||||||||||||| ||| | |||||| ||||    
T  8803998 aggaaaattctatggtgaagtcata----tgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacactccactatttgtagaatg 8803903  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||| |||||||||  |       ||||||||||| ||||  |||||||||||||||||||| ||||||||||    
T  8803902 acatcaaaagttcagcc-------tatcatcaatttatcaggttaacaagactacacttaatataattttatc 8803837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 230 - 411
Target Start/End: Original strand, 40862416 - 40862597
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaat-tgtaatgagtaacaccccaatgtttgtacaa 328  Q
    |||||||||| ||| ||||||| |  | ||| ||||||  | ||||||||||||||||| |||||||  |||  |||||||||||||| |||||||||||    
T  40862416 aaggaaaattctatagtgaagtcacgaaaataacttttctggtgaagttaacactataatatcaaaaaatgttgtgagtaacaccccactgtttgtacaa 40862515  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 411  Q
    || ||| ||||||||| || |||| ||||||||||||  ||| | |||||| | ||||||||||||||||||||||| |||||    
T  40862516 tggcatcaaaagttcagtc-tcatggtatcatcaatttttcatactaacaaaaatacacttaatctaattttatcctactttg 40862597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 234 - 403
Target Start/End: Complemental strand, 7891137 - 7890977
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| ||||||||||| || |||||||||||||   ||||||||||||||||||||||||| |         ||||| |||  |||||||||||| ||    
T  7891137 aaaattctatggtgaagtcatgagaatgactttttttgtgaagttaacactataacatcaaaaat---------aacactccaccgtttgtacaatggca 7891047  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | ||||||||  || ||||| |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  7891046 tcaaaagttcggtcctcataatatcatcaattcatcagattaacaagactacactcaatctagttttatc 7890977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 403
Target Start/End: Original strand, 33906223 - 33906382
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||| |||| ||||||||||||  | |||||| |||||||||  || |||| |||| |||||| ||||||| ||||| ||          
T  33906223 ggaaaattctatggtgaaattatgagaatgacttttctggtgaagtcaacactatagtattaaaagtgtagtgagtagcaccccactgtttata------ 33906316  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
          ||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  33906317 ------aagttcagtcttcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatc 33906382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 228 - 403
Target Start/End: Complemental strand, 39099304 - 39099139
Alignment:
Q  228 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa-ttgtaatgagtaacaccccaatgtttgtac 326  Q
    |||||||||||| ||||||||||| || ||||||||||||  |||||        |||||||||||||| ||| ||   ||||||||||| | |||||||    
T  39099304 taaaggaaaattctatggtgaagtcatgagaatgacttttctgatga--------ctataacatcaaaagttgcaa---gtaacaccccactctttgtac 39099216  T
Q  327 aatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | |  ||| ||||||||| || |||||||||| ||||||||||| |||||||| | |||||||||||||||||||||    
T  39099215 actagcatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacaaaaatacacttaatctaattttatc 39099139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 232 - 296
Target Start/End: Original strand, 15009241 - 15009305
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 296  Q
    |||||||| ||||||||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  15009241 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaa 15009305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 405
Target Start/End: Complemental strand, 41911153 - 41911006
Alignment:
Q  259 atgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgta-caatgacattaaaagttcaatcatcatagtat 357  Q
    |||| ||||| | ||||||||| |||||| |||||||| |||  ||||||||||||| |   || || || |  ||| |||| |||| ||| ||||||||    
T  41911153 atgatttttttggtgaagttaatactatatcatcaaaagtgtcgtgagtaacacccccactattataacagtagcatcaaaaattcagtcaacatagtat 41911054  T
Q  358 catcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  41911053 catcaattcatcagattaacaagaatacatttaatctaattttatcct 41911006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 316
Target Start/End: Complemental strand, 24823465 - 24823379
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 316  Q
    |||||||||  |||||| ||||||| ||||||||||||| | ||||||||||||||||| ||||||| ||| | | |||||||||||    
T  24823465 aaggaaaatactatggtaaagttatgagaatgacttttttggtgaagttaacactataatatcaaaagtgttaagtgtaacacccca 24823379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 358 - 402
Target Start/End: Complemental strand, 4132750 - 4132706
Alignment:
Q  358 catcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  4132750 catcaattcatcaaattaacaagactacacttaatctaattttat 4132706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 405
Target Start/End: Original strand, 43025741 - 43025874
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaat-catcatagtatcatcaattcatca 370  Q
    ||||||||||  ||||  ||||||| |||  ||| ||| |||||| | |||||||||||  |||||||||||| | ||| ||| ||||||||||||||||    
T  43025741 tgaagttaacgatatagtatcaaaagtgttgtgattaataccccactctttgtacaatggtattaaaagttcagttcat-ataatatcatcaattcatca 43025839  T
Q  371 cattaacaagactacacttaatctaattttatcct 405  Q
     | ||| |||| |||| ||||||||||||||||||    
T  43025840 gactaagaagaatacatttaatctaattttatcct 43025874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 400
Target Start/End: Original strand, 7998411 - 7998461
Alignment:
Q  350 catagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
    |||| |||||||||| ||||| |||||||||| ||||||||||||||||||    
T  7998411 cataatatcatcaatacatcagattaacaagaatacacttaatctaatttt 7998461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 285
Target Start/End: Complemental strand, 4133199 - 4133146
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacacta 285  Q
    ||||||||||||||| |||| || ||||||||||||| | ||||||||||||||    
T  4133199 ggaaaattttatggtcaagtcatcagaatgacttttttggtgaagttaacacta 4133146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 34685728 - 34685785
Alignment:
Q  223 taaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 280  Q
    |||||| |||||||||| |||| ||||||||| ||||||| ||||| |||||||||||    
T  34685728 taaaatgaaggaaaattctatgatgaagttatgagaatgaattttttgatgaagttaa 34685785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 403
Target Start/End: Complemental strand, 1954077 - 1954009
Alignment:
Q  336 aaaagttcaatcatcatagtatc-atcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||||||||  | |||||||||| |||||||||||| ||||| | ||||||||| ||||||||||||||    
T  1954077 aaaagttcagccctcatagtatctatcaattcatcagattaatatgactacactaaatctaattttatc 1954009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 4108972 - 4108924
Alignment:
Q  220 caataaaataaaggaaaattttatggtgaagttataagaatgacttttt 268  Q
    |||||||| ||||||||||||||||||||||| || | |||||||||||    
T  4108972 caataaaagaaaggaaaattttatggtgaagtcatgaaaatgacttttt 4108924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 5e-63; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 3655388 - 3655214
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||||||||||||||| |||| ||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||  ||||||||||||    
T  3655388 aggaaaattttatggtgaagtcataaaaatgacttttttgataaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatg 3655289  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||| || |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  3655288 acatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 3655214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 37203058 - 37203231
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||     
T  37203058 ggaaaattctatggtgaagtcataaaaatgatttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtacagtgg 37203157  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| || |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  37203158 catcaaaagttcagtcctcatagtatcatcaattcataagattaacaagactacacttaatctaattttatcct 37203231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 26941446 - 26941272
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| |||||||||| ||||| | ||||||||||||||||| ||||||||| ||||||||||||||||| |||||||| ||||    
T  26941446 aggaaaattctatggtgaagtcataagaatgatttttttggtgaagttaacactataaaatcaaaattataatgagtaacaccccactgtttgtataatg 26941347  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||| || |||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  26941346 acatcaaaagttcagtcctcatggtatcattaattcatcagattaacaagactacacttaatctaattttatcct 26941272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 20373481 - 20373308
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||||||| ||||||| |||||||||| ||||| | ||||||||| ||||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  20373481 ggaaaattttatagtgaagtcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaacgagtaacaccccactgtttgtacaatga 20373382  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| |  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20373381 catcaaaagttcagttctcatggtatcatcaattcatcaaattaacaagactacacttaatctaattttatcct 20373308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 37157699 - 37157871
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || | |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| ||     
T  37157699 ggaaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactg-ttgtacagtgg 37157797  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| |||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||    
T  37157798 catcaaaagttcagtcatcatagtatcatcaatttataagattaacaagactacacttaatctaattttatcct 37157871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 47481510 - 47481683
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||||||||||||||| ||| ||||||  |||| | ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  47481510 aaaggaaaattttatggtgaagtcataggaatgatgtttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaa 47481609  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    |||||| ||||||| |  | ||||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  47481610 tgacatcaaaagtttagccctcatagtatcatcaattcatcatgttaacaagactacacttaatataattttat 47481683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 231 - 403
Target Start/End: Complemental strand, 40552445 - 40552273
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| || ||||||||||||| |  |||||||||||||||||||||||| ||||||||||||||| |||  ||||||||||||    
T  40552445 aggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaacactataacatcaaaaatgtaatgagtaacactccaccgtttgtacaatg 40552346  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||| ||||||||| || ||||| |||||||||||||||| |||||||| |||||||||||| ||||||||||    
T  40552345 acatcaaaagttcagtcctcataatatcatcaattcatcagattaacaacactacacttaatttaattttatc 40552273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 278 - 405
Target Start/End: Complemental strand, 42506214 - 42506087
Alignment:
Q  278 taacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaac 377  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||||    
T  42506214 taacactataacatcaaaattgtaatgagtaataccccactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaac 42506115  T
Q  378 aagactacacttaatctaattttatcct 405  Q
    ||||||||||||||||||||||||||||    
T  42506114 aagactacacttaatctaattttatcct 42506087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 51213166 - 51212993
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || ||||||||||||| | ||||||||||||| |||||| |||| ||||||||| ||||||||| |||||||||||||     
T  51213166 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactgtaacataaaaaatgtaatgagcaacaccccactgtttgtacaatgg 51213067  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||| | || ||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  51213066 catcaaaagttgagtcctcatagtatcatcaactcatcagattaacaagactacacttaatataattttatcct 51212993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 48354930 - 48355105
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| || ||||||| ||||  | ||||||||||||||||| || |||| ||||||||||||||||||| ||||||||||||    
T  48354930 aaggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaacactataatattaaaaatgtaatgagtaacaccccattgtttgtacaat 48355029  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||| ||||||||| |  ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  48355030 ggcatcaaaagttcagttctcatagtatcatcaactcatcagattaacaagactacacttagtctaattttatcct 48355105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 403
Target Start/End: Complemental strand, 21009997 - 21009816
Alignment:
Q  225 aaataaaggaaaattttatggtgaagttataagaatgactttttggat---gaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 321  Q
    |||| ||||||||||||||||||||||||||||||||| |||||   |   ||| || ||||||||||||||||| ||||||||||||||||||| | ||    
T  21009997 aaattaaggaaaattttatggtgaagttataagaatgatttttttttttgtgaatttgacactataacatcaaaaatgtaatgagtaacaccccactatt 21009898  T
Q  322 tgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||| |||||||| |||||||||  | ||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  21009897 tgtagaatgacatcaaaagttcagccctcatattatcatcaattcatcaggttaacaagactacacttaatataattttatc 21009816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 400
Target Start/End: Original strand, 35844310 - 35844485
Alignment:
Q  225 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 324  Q
    ||||||||||||||| ||||||||||| || | ||||||||||  | ||||||||||||||||||| ||||| |||  ||||||||||| || |||||||    
T  35844310 aaataaaggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaacactataacaacaaaaatgttgtgagtaacacctcactgtttgt 35844409  T
Q  325 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
    ||| |||||| ||||||| | ||  ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  35844410 acagtgacatcaaaagtttagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaatttt 35844485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 52041109 - 52040934
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaa-tgtttgtacaat 329  Q
    ||||||||| |  |||||||| || ||||||||||||  | ||||||||| ||||||||||||||| |||| |||||||| |||||| |||||||| | |    
T  52041109 aggaaaattctgaggtgaagtcatgagaatgacttttctggtgaagttaatactataacatcaaaagtgtagtgagtaactccccaaatgtttgtatagt 52041010  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||| ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  52041009 ggcatcaaaagttcagtcatcatagtatcatcaattcatcagattaacaagattacacttaatctaattttatcct 52040934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 230 - 405
Target Start/End: Complemental strand, 4761838 - 4761661
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttg--gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 327  Q
    |||||||||| ||||||||| | || ||| |||||||||   | ||||||||| ||||||| ||||||| |||||||||||||||  || ||||||||||    
T  4761838 aaggaaaattctatggtgaattcatgagattgacttttttttggtgaagttaatactataatatcaaaaatgtaatgagtaacacttcactgtttgtaca 4761739  T
Q  328 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||| ||||||||| || ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  4761738 atgacatcaaaagttcagtcctcatagtatcatcaactcatctgattaacaagactacacttaatctaattttatcct 4761661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 4015451 - 4015624
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || ||||||||||||  |||||||||||||||||| |||||||| |||  |||||||||||| | |||||||| | |||    
T  4015451 ggaaaattctatggtgaagtcatgagaatgacttttctgatgaagttaacactatagcatcaaaagtgttgtgagtaacacccaactgtttgtagagtga 4015550  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| || |||||||||||||||||||||| |||||||||| || | ||| ||||||||||||||    
T  4015551 catcaaaagttcagtcctcatagtatcatcaattcatcatattaacaagaatataattagtctaattttatcct 4015624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 231 - 405
Target Start/End: Original strand, 11466814 - 11466988
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| |||||||||||  | ||||||||||||  ||||||||||| |||||||||||  || |||  |||||||||||||| |||||||||| ||    
T  11466814 aggaaaattctatggtgaagtcttgagaatgacttttctgatgaagttaagactataacatcgcaagtgttgtgagtaacaccccactgtttgtacagtg 11466913  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     ||| ||||||| | ||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  11466914 gcatcaaaagtttagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 11466988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 215 - 405
Target Start/End: Complemental strand, 54828902 - 54828713
Alignment:
Q  215 acatacaataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccc 314  Q
    ||||| ||||| || ||| |||||||||||||||||| |||| ||| | ||||| | | |||||||||||||||||| ||||| ||||||||||||||||    
T  54828902 acatataataatattaagaaaaattttatggtgaagtcataaaaataatttttttggtaaagttaacactataacataaaaat-gtaatgagtaacaccc 54828804  T
Q  315 caatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||  ||||  |||| ||||| |||| |||| || |||||| ||||||||||||||| || |||||||||||||||||||||||||||||||    
T  54828803 caccgtttaaacaacgacatcaaaaattcattcttcatagcatcatcaattcatcatatgaacaagactacacttaatctaattttatcct 54828713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 7327669 - 7327494
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaa-cactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    ||||||||| |||||||||||||| |||||||||||||   ||||||||| |||||||||||||||| |||  |||||||||| ||| | |||||||| |    
T  7327669 aggaaaattctatggtgaagttatgagaatgacttttttagtgaagttaaacactataacatcaaaagtgttgtgagtaacactccattatttgtacagt 7327570  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||| ||||||||| ||  ||||||||||||||||||||  |||||||||| |||||||||| || |||||||||    
T  7327569 gacatcaaaagttcagtccccatagtatcatcaattcatcggattaacaagaatacacttaatttatttttatcct 7327494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 247 - 405
Target Start/End: Complemental strand, 11357535 - 11357376
Alignment:
Q  247 gaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaa-tgtttgtacaatgacattaaaagttcaa 345  Q
    ||||| || ||||||||||||  | |||||||||||||||| |||||||| | || ||||||||||||| | |||||||||| |  ||| |||||||||     
T  11357535 gaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtatagtgagtaacacccccactgtttgtacagttgcatcaaaagttcag 11357436  T
Q  346 tcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  11357435 tcatcatagtatcatcaattcatcagattaacaagactacatttaatctaattttatcct 11357376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 242 - 403
Target Start/End: Original strand, 29099356 - 29099517
Alignment:
Q  242 atggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagt 341  Q
    |||||||||| || ||||||||||||  | |||||||||||||||||||| |||| |||  |||||||||||||| |||||||||| ||||||  |||||    
T  29099356 atggtgaagtcattagaatgacttttctggtgaagttaacactataacataaaaaatgtcgtgagtaacaccccactgtttgtacagtgacatctaaagt 29099455  T
Q  342 tcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||| ||  | ||||||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  29099456 tcagtccccttagtatcatcaattcatcatattaacaagaatacacttaatttaattttatc 29099517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 234 - 403
Target Start/End: Complemental strand, 43976068 - 43975902
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||||||||||||||| || |||||||||||||   |||||| ||||||||| |||||||| |||| |||||| ||| ||| | ||||||| ||||||    
T  43976068 aaaattttatggtgaagtcatgagaatgacttttt---tgaagtcaacactatagcatcaaaagtgtagtgagtagcactccactatttgtacgatgaca 43975972  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | ||||||| |||| ||||| |||||||||||||||| |||||||| | | |||||||||||||||||||    
T  43975971 tcaaaagtttaatcctcataatatcatcaattcatcagattaacaaaattgcacttaatctaattttatc 43975902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 232 - 403
Target Start/End: Original strand, 54505799 - 54505969
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    ||||||||||||| ||||||   |||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| | ||| || |||||    
T  54505799 ggaaaattttatgatgaagtcgcaagaatgacttttttgttgaagttaacactataacatcaaaaatgtaatgagtaacaccccattatttatagaatga 54505898  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||| |||| ||| | | |||||||||||| ||| ||||   |||||||||||||||||||| ||||||||||    
T  54505899 catcaaaaattc-agcctcatagtatcataaatacatcgggttaacaagactacacttaatataattttatc 54505969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 44186687 - 44186513
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| |||| ||||||    ||||||| ||||| | |||||||||||||||| |||||||| |||  |||||||||||||  ||||| |||| ||    
T  44186687 aggaaaattctatgatgaagtcgagagaatgatttttttggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccgctgtttatacagtg 44186588  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||| ||  ||||||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  44186587 acatcaaaagttcagtccccatagtatcatcaattcatcaaattaacaaaaatacacttaatctaattttatcct 44186513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 220 - 405
Target Start/End: Complemental strand, 53229350 - 53229164
Alignment:
Q  220 caataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccc-caat 318  Q
    |||| ||| |||| ||||||||| |||||||| || | ||| | ||||  | |||| ||||||||||| |||||||| |||| |||| ||||||| ||||    
T  53229350 caattaaaaaaagaaaaattttaaggtgaagtcatgaaaattatttttctggtgaaattaacactatagcatcaaaagtgtagtgagcaacaccctcaat 53229251  T
Q  319 gtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||||| |  ||| ||||||||| |||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  53229250 gtttgtacagttgcatcaaaagttcagtcatcataatatcatcaattcatcagattaacaagactacagttaatctaattttatcct 53229164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 27480564 - 27480391
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||| |||||| || |||||||  |||| | | |||| |||||||||||||||||| | ||||||||| || || | |||||||||  |||    
T  27480564 ggaaaattctatgatgaagtcatgagaatgatatttttggtaaagtcaacactataacatcaaaagtataatgagtagcatccaattgtttgtacggtga 27480465  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| ||  ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  27480464 catcaaaagttcagtccccatagtatcatcaattcatcatattaacaagactgcacttaatctaattttatcct 27480391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 230 - 401
Target Start/End: Original strand, 22450957 - 22451128
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| || ||||||| ||||  | |||||| ||||||||| |||||||| |||| |||||| |||| || ||||||||   |    
T  22450957 aaggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcacctcactgtttgtatggt 22451056  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 401  Q
    | ||| ||||||||| ||  ||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  22451057 ggcatcaaaagttcagtccccatagtatcatcaattcatcatattaacaagactgcacttaatctaatttta 22451128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 39282642 - 39282816
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| || | ||||| ||||  ||| || |||||||||||||||||||| |||  ||||||| |||||| ||||| |||| |    
T  39282642 aaggaaaattctatggtgaagtcatgaaaatgatttttctgataaaattaacactataacatcaaaactgtg-tgagtaataccccactgtttatacagt 39282740  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||| ||||||||| |  ||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  39282741 ggcatcaaaagttcagttctcatattatcatccattcatcagattaacaagactacacttaatctaattttatcct 39282816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 234 - 405
Target Start/End: Complemental strand, 46297945 - 46297774
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| ||||||||||| || | ||||||||||  | ||||||||||||||||||||||||| | || |||||||||| ||| ||||||||||||| |     
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacactataacatcaaaaatatagtgagtaacacaccactgtttgtacaatggcg 46297846  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||||||||| ||  | ||||||||||||||||| | |||||||| ||||||||||||| || ||||||||    
T  46297845 tcaaaagttcagtccccgtagtatcatcaattcattagattaacaaaactacacttaatcaaactttatcct 46297774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 405
Target Start/End: Complemental strand, 33378970 - 33378797
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| |||||  ||||||| ||||||||||||    |||||| |||||||||  ||||||| |||| ||||||  |||||||| |||||||      
T  33378970 aaaggaaaattctatggcaaagttatgagaatgacttttg---tgaagtcaacactatagtatcaaaagtgtagtgagtagtaccccaatatttgtacgg 33378874  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||| ||||||||| ||  |||||||| |||||||||||| |||||||||||| |||||||||||||||||||||    
T  33378873 tgacatcaaaagttcagtccccatagtattatcaattcatcagattaacaagactgcacttaatctaattttatcct 33378797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 405
Target Start/End: Original strand, 34132923 - 34133099
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| |||  |||||| |  | ||||||||||| | |||| |||||||||||  ||||||| |||  |||||||||||||| |||||||||||    
T  34132923 aaaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaa 34133022  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||| ||||||||| ||  |||| |||||||||||||||| | ||| |||| |||||||||| ||||||||||||    
T  34133023 tgacatcaaaagttcagtccccataatatcatcaattcatcagactaataagaatacacttaatataattttatcct 34133099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 21193595 - 21193770
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| |||||| |||| || ||||||||||||  | ||||||||||||| |   ||||||| |||  |||||||||||||| |||||||| | |    
T  21193595 aaggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaacactgttgaatcaaaagtgttgtgagtaacaccccactgtttgtagagt 21193694  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||| ||||||||| ||  ||| ||||||| ||||||||| |||||||||| |||| ||||||||||||||||||    
T  21193695 gacatcaaaagttcagtccccatggtatcattaattcatcagattaacaagaatacatttaatctaattttatcct 21193770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 245 - 404
Target Start/End: Original strand, 40935995 - 40936154
Alignment:
Q  245 gtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttca 344  Q
    ||||||| || ||||||| ||||  | |||||||||||||||| |||||||| |||   |||||||||| || ||||| |||| |||||| |||||||||    
T  40935995 gtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttgcgagtaacacctcattgtttatacagtgacatcaaaagttca 40936094  T
Q  345 atcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcc 404  Q
     || ||||||||||||| |||||||| |||||||||| |||||||||| |||||||||||    
T  40936095 gtcctcatagtatcatctattcatcagattaacaagaatacacttaatataattttatcc 40936154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 232 - 400
Target Start/End: Original strand, 45174494 - 45174664
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgt--aatgagtaacaccccaatgtttgtacaat 329  Q
    ||||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||||||||||| |||    ||||||||||  || |||||||||| |    
T  45174494 ggaaaattttatggtgaagttgtgagaataacttttttggtgaagttaacactataacatcaaaagtgttgtgtgagtaacacttcactgtttgtacagt 45174593  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
      ||| ||||||||| ||  ||||||||||||||||||||| |||||||||| |||| ||||| |||||||    
T  45174594 agcatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagaatacatttaatttaatttt 45174664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 272 - 405
Target Start/End: Original strand, 2007964 - 2008097
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 371  Q
    |||||||||||||||| | | |||| |||  |||||||||||||| |||||||||| || ||| ||||||||||||  ||||| |||||||||||||||     
T  2007964 tgaagttaacactatagcgttaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaaagttcaatccccatagcatcatcaattcatcag 2008063  T
Q  372 attaacaagactacacttaatctaattttatcct 405  Q
    |||||||||| || ||||||||||||||||||||    
T  2008064 attaacaagaatatacttaatctaattttatcct 2008097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 46994842 - 46994673
Alignment:
Q  225 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 324  Q
    |||| |||||||||| || ||||||||  ||||||||| ||||| | ||||||||| |||||||||||||||| ||||||||||||||           |    
T  46994842 aaatgaaggaaaattctacggtgaagtcgtaagaatgatttttttggtgaagttaatactataacatcaaaat-gtaatgagtaacaca----------t 46994754  T
Q  325 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||||||| ||||||||| || ||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||    
T  46994753 acaatgacatcaaaagttcagtcctcatagtatcatcaactcatatgattaacaagactacacttaatctaattttatcct 46994673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 234 - 405
Target Start/End: Complemental strand, 24708295 - 24708127
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    ||||||||||||||||||||| | |||||||||||   ||| ||||||||  ||||||||||| || | ||||||||||| || |||  ||||| |||||    
T  24708295 aaaattttatggtgaagttatcaaaatgactttttt--tgatgttaacacg-taacatcaaaactgcagtgagtaacacctcactgt--gtacagtgaca 24708201  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacac--ttaatctaattttatcct 405  Q
    | ||||||||| || |||||||||||||||||||||| ||||||||||||||||  || |||||||||||||||    
T  24708200 tcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagactacacttttgatctaattttatcct 24708127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 235 - 405
Target Start/End: Complemental strand, 22446247 - 22446076
Alignment:
Q  235 aaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    ||||| || |||||||| || | |||||||||||  | ||||||||||| |||| |||||||| | || |||||||||||||| | |||||||| || ||    
T  22446247 aaattctacggtgaagtcatgaaaatgactttttttggtgaagttaacattatatcatcaaaaatatagtgagtaacaccccact-tttgtacagtggca 22446149  T
Q  334 ttaaaagttcaatca-tcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | |||||||||| |  |||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  22446148 tcaaaagttcaaaccctcatagtatcatcaattcatcatataaataagactacacttaatctaattttatcct 22446076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 260 - 404
Target Start/End: Original strand, 53176074 - 53176217
Alignment:
Q  260 tgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatca 359  Q
    ||||||||  |||||||||||||  |||||||||||| |||  | |||||   || | |||||||||||| |||| ||||||||| || |||||||||||    
T  53176074 tgacttttctgatgaagttaacatcataacatcaaaaatgttgtaagtaatgtcc-actgtttgtacaataacatcaaaagttcagtcctcatagtatca 53176172  T
Q  360 tcaattcatcacattaacaagactacacttaatctaattttatcc 404  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  53176173 tcaattcatcagattaacaagattacacttaatctaattttatcc 53176217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 405
Target Start/End: Original strand, 32373459 - 32373634
Alignment:
Q  228 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 327  Q
    |||||| ||||| |||| |||||| || ||||||||||||   || |||||||||||||| |||||||| |||  |||||||| || |  ||||||||||    
T  32373459 taaagggaaattctatgatgaagtcatgagaatgacttttccaataaagttaacactatagcatcaaaagtgttgtgagtaactccac--tgtttgtaca 32373556  T
Q  328 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     || ||| |||||||| | |   || ||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  32373557 gtggcatcaaaagttccaccccaatggtatcatcaattcatcatattaacaagaatacacttaatctaattttatcct 32373634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 405
Target Start/End: Original strand, 3362284 - 3362419
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 371  Q
    |||||||||||||||| ||||| || | || ||||||||| |||| | |||||||| || ||| ||||||||| || |||| |||||||||||||||||     
T  3362284 tgaagttaacactatagcatcagaaatatagtgagtaacatcccactatttgtacagtggcatcaaaagttcactcctcatggtatcatcaattcatcat 3362383  T
Q  372 attaacaagactacac--ttaatctaattttatcct 405  Q
     |||||||||||||||  ||||||||||||||||||    
T  3362384 gttaacaagactacactattaatctaattttatcct 3362419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 44891498 - 44891661
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| || |||||||| || | ||||||||||||| ||||||||||||||||||||||||| |||  ||||||||| |||| |||         |     
T  44891498 ggaaaattatacggtgaagtcatgaaaatgactttttgg-tgaagttaacactataacatcaaaagtgttgtgagtaacatcccactgt---------gg 44891587  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||| | ||  |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  44891588 catcaaaagtttagtccacatagtatcatcaattaatcagattaacaagaatacacttaatctaattttatcct 44891661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 272 - 403
Target Start/End: Complemental strand, 24489107 - 24488976
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 371  Q
    ||||||||| ||||||  || |||| |||  |||||||||  ||| |||||| |||||||||| ||||||||| ||  |||| ||||||||||||||||     
T  24489107 tgaagttaagactatagtattaaaaatgttgtgagtaacattccactgtttgcacaatgacatcaaaagttcagtccccatattatcatcaattcatcag 24489008  T
Q  372 attaacaagactacacttaatctaattttatc 403  Q
    | |||||||| |||||||||||||||||||||    
T  24489007 actaacaagaatacacttaatctaattttatc 24488976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 405
Target Start/End: Original strand, 38591727 - 38591862
Alignment:
Q  274 aagttaacactataacatcaaaattgtaatgagtaacaccccaatgt----ttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 369  Q
    ||||||||||||||||||||||||| ||  |||||||| | || |||    |||||||||| ||| ||||||| | ||  |||| ||| ||||| |||||    
T  38591727 aagttaacactataacatcaaaattatagggagtaacatctcattgtattgttgtacaatggcatcaaaagttaagtccacatattattatcaactcatc 38591826  T
Q  370 acattaacaagactacacttaatctaattttatcct 405  Q
    | ||||||||||||||||||||||||||||||||||    
T  38591827 agattaacaagactacacttaatctaattttatcct 38591862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 405
Target Start/End: Original strand, 25579731 - 25579903
Alignment:
Q  233 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    |||||||||||||| ||||||| ||||||| ||||  | ||||||||| |||||| |||||||| |||  ||| |||||  | | | ||| |||| ||||    
T  25579731 gaaaattttatggttaagttatgagaatgatttttctggtgaagttaatactatagcatcaaaagtgttgtgaataacattctactatttatacagtgac 25579830  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || ||||||||| ||  |||| |||||||| || || | |||||||| | |||||||||||||||||||||||    
T  25579831 atcaaaagttcagtccccatattatcatcagtttattagattaacaaaaatacacttaatctaattttatcct 25579903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 405
Target Start/End: Original strand, 43348320 - 43348421
Alignment:
Q  303 tgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    |||| ||||||||| |||||||  | || ||| ||||||||| || |  ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  43348320 tgagcaacaccccactgtttgtttagtggcatcaaaagttcagtcttt-tagtatcatcaattcatcagattaacaagaatacacttaatctaattttat 43348418  T
Q  403 cct 405  Q
    |||    
T  43348419 cct 43348421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 336 - 405
Target Start/End: Original strand, 29163913 - 29163982
Alignment:
Q  336 aaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||||| || || ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||    
T  29163913 aaaagttcagtcctcttagtatcatcaattcatcagattaataagaatacacttaatctaattttatcct 29163982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 33698265 - 33698317
Alignment:
Q  353 agtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  33698265 agtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 33698317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 14586735 - 14586682
Alignment:
Q  352 tagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  14586735 tagtatcatcaattcatcagattaacaagaatacacttaatctaactttatcct 14586682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 403
Target Start/End: Complemental strand, 22622780 - 22622732
Alignment:
Q  355 tatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  22622780 tatcatcaattcatcagattaacaaaactacacttaatctaattttatc 22622732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 55343473 - 55343405
Alignment:
Q  228 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 296  Q
    |||||||||||| ||||||||||| |  | ||||||||||  ||||||||||||||||||| |||||||    
T  55343473 taaaggaaaattctatggtgaagtcacgaaaatgacttttctgatgaagttaacactataatatcaaaa 55343405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 53175706 - 53175749
Alignment:
Q  224 aaaataaaggaaaattttatggtgaagttataagaatgactttt 267  Q
    |||| |||||||||||||||||||||||||| ||||||||||||    
T  53175706 aaaaaaaaggaaaattttatggtgaagttatgagaatgactttt 53175749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 41585449 - 41585408
Alignment:
Q  275 agttaacactataacatcaaaattgtaatgagtaacacccca 316  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  41585449 agttaacactataacatcaaaaatataatgagtaacacccca 41585408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 11835695 - 11835639
Alignment:
Q  350 catagtatcatcaattcatcacattaacaagactacacttaatctaat-tttatcct 405  Q
    |||||||||||||||| |||| |||||||| | ||||||||||||||| ||||||||    
T  11835695 catagtatcatcaatttatcatattaacaaaaatacacttaatctaatatttatcct 11835639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 33698219 - 33698263
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacacccca 316  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||    
T  33698219 tgaagttaacactataacatcaaaaatgttgtgagtaacacccca 33698263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 2613907 - 2613962
Alignment:
Q  258 aatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacc 313  Q
    ||||||||||| | ||||||||||||||||||| ||||| |||  |||||||||||    
T  2613907 aatgacttttttgttgaagttaacactataacaccaaaagtgttgtgagtaacacc 2613962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 19606969 - 19606914
Alignment:
Q  225 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 280  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||  | |||||||||    
T  19606969 aaataaatgaaaattctatggtgaagttataaaaatgacttttctggtgaagttaa 19606914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 400
Target Start/End: Original strand, 36012245 - 36012296
Alignment:
Q  349 tcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
    ||||| |||||||||||||||| || ||||||| ||||| ||||||||||||    
T  36012245 tcataatatcatcaattcatcagatgaacaagaatacacctaatctaatttt 36012296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 47870211 - 47870262
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 280  Q
    ||||||||||| |||  ||||||||| ||||||||||||| |||||||||||    
T  47870211 aaaggaaaattctatactgaagttatgagaatgactttttcgatgaagttaa 47870262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 327
Target Start/End: Complemental strand, 11835790 - 11835701
Alignment:
Q  233 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 327  Q
    ||||||| ||||||||||| || ||||||| ||||| | |||||||||||||||     ||||| |||  ||||||||||| || ||||||||||    
T  11835790 gaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactat-----caaaagtgttgtgagtaacacctcactgtttgtaca 11835701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 384
Target Start/End: Complemental strand, 53811729 - 53811695
Alignment:
Q  350 catagtatcatcaattcatcacattaacaagacta 384  Q
    ||||||||||||||||||||| |||||||||||||    
T  53811729 catagtatcatcaattcatcagattaacaagacta 53811695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 29163839 - 29163895
Alignment:
Q  233 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataac 289  Q
    ||||||||||||||||||| || | ||||| ||||  | ||||||||||||||||||    
T  29163839 gaaaattttatggtgaagtcattaaaatgatttttctggtgaagttaacactataac 29163895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 42665593 - 42665541
Alignment:
Q  228 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 280  Q
    |||||||||||| |||||||||||||| | ||||| ||||| | |||||||||    
T  42665593 taaaggaaaattctatggtgaagttatgataatgatttttttggtgaagttaa 42665541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 2e-59; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 228 - 405
Target Start/End: Original strand, 24886098 - 24886277
Alignment:
Q  228 taaaggaaaattttatggtgaagttataagaatgactttttg--gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgta 325  Q
    |||||||||||||||||||||| | || |||||||||||||   | ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||    
T  24886098 taaaggaaaattttatggtgaaatcatgagaatgacttttttttggtgaagttaatactataacatcaaaaatgtaatgagtaacaccccactgtttgta 24886197  T
Q  326 caatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||||| ||||||||| || ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  24886198 caatgacatcaaaagttcagtcctcatagtatcatcaactcatcatattaacaagactacacttaatctaattttatcct 24886277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 234 - 403
Target Start/End: Original strand, 699152 - 699321
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||||| ||| |||| | || |||||||||||||| |||||||||| |||||    
T  699152 aaaattttatggtgaagttatgagaatgacttttctgatgaagttaacactatagcataaaaaatctagtgagtaacaccccactgtttgtacagtgaca 699251  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  699252 tcaaaagttcagtcatcataatatcatcaattcatcagattaacaagactacacttaatctaattttatc 699321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 229 - 405
Target Start/End: Complemental strand, 22974260 - 22974084
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| |||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||    
T  22974260 aaaggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaaaagtaatgagtaacatcccactgtttgtacaa 22974161  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | |||| |||||||||||  ||||| ||||||||| |||||| | ||||||||||||||||||||||||||||||||    
T  22974160 taacatcaaaagttcaattctcatattatcatcaactcatcagaataacaagactacacttaatctaattttatcct 22974084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 221 - 403
Target Start/End: Complemental strand, 31705797 - 31705616
Alignment:
Q  221 aataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgt 320  Q
    ||||||||||| ||||||| ||||||||||| |||| ||||| ||||| | ||||||||||||||||||||||||| ||||| ||||||||||| |  ||    
T  31705797 aataaaataaaagaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacaccctaccgt 31705698  T
Q  321 ttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||||||||||||| |||||| || || || ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31705697 ttgtacaatgacatcaaaagtccagtcctc-tagtatcatcaattcatcagattaacaagactacacttaatctaattttatc 31705616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 230 - 403
Target Start/End: Complemental strand, 38528413 - 38528241
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| || | ||||  ||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |    
T  38528413 aaggaaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaacactataacatcaaaattgtaatgagtaacaccccattgtttatacagt 38528314  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||||| ||||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  38528313 gacatcaaaagttcagtc-tcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatc 38528241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 228 - 405
Target Start/End: Complemental strand, 14919708 - 14919530
Alignment:
Q  228 taaaggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac 326  Q
    |||||||||||| ||||||||||| || ||||| | |||||  ||||||||||||| ||||||||||||| |||||||||||||||| || ||||| ||     
T  14919708 taaaggaaaattatatggtgaagtcatgagaattattttttttgatgaagttaacattataacatcaaaaatgtaatgagtaacacctcactgtttatat 14919609  T
Q  327 aatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||||| ||||||||| || ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  14919608 aatgacatcaaaagttcagtcctcatagtatcatcaactcatcatattaacaaaactacacttaatctaattttatcct 14919530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 223 - 405
Target Start/End: Original strand, 22980784 - 22980966
Alignment:
Q  223 taaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgttt 322  Q
    ||||||||  |||||||||||| ||||||||| ||||||||||||  | ||||||||||||||||  ||||||| |  | ||||||| |||||| |||||    
T  22980784 taaaataatagaaaattttatgatgaagttatgagaatgacttttctggtgaagttaacactatagtatcaaaaatacagtgagtaataccccactgttt 22980883  T
Q  323 gtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |  ||||||||| ||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22980884 gagcaatgacatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 22980966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 230 - 403
Target Start/End: Complemental strand, 5112490 - 5112317
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||||||||||||||| || | ||||||||||| | ||||||||| |||||||||| |||| | || |||||||||||||| |||||||||| |    
T  5112490 aaggaaaattttatggtgaagtcatgaaaatgacttttttggtgaagttaatactataacataaaaaatatagtgagtaacaccccactgtttgtacagt 5112391  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | ||| ||||||||| ||  ||||||||||||||||||| | ||||||||||||| ||||||||||||||||||    
T  5112390 ggcatcaaaagttcagtccccatagtatcatcaattcattaaattaacaagactatacttaatctaattttatc 5112317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 272 - 411
Target Start/End: Complemental strand, 30969459 - 30969320
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 371  Q
    ||||||||||||||||||||||||| |||  |||||||||||||| | ||| ||||||||||| ||||||||| || ||||||||||||||||||||||     
T  30969459 tgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttatacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcag 30969360  T
Q  372 attaacaagactacacttaatctaattttatcctcctttg 411  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  30969359 attaacaagaatacacttaatctaattttatcctactttg 30969320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 231 - 405
Target Start/End: Original strand, 9200232 - 9200406
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||||||||||||||| || | ||| ||||||  | ||||||||||||||||||||||||| |||  ||||||||||||||  ||||||||| ||    
T  9200232 aggaaaattttatggtgaagtcattaaaataacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccacagtttgtacagtg 9200331  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||| | || || ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  9200332 acatcaaaagtttagtcctcttagtatcatcaattcatcatattaacaagaatacatttaatctaattttatcct 9200406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 229 - 400
Target Start/End: Complemental strand, 8742065 - 8741893
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaat-gtttgtaca 327  Q
    ||||||||||| ||||||||||| || ||||||||||||  | |||||||||||||||| |||||||| |||  ||||||||||||| || |||||||||    
T  8742065 aaaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacccccattgtttgtaca 8741966  T
Q  328 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
    ||| ||| ||||||||| ||  ||||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  8741965 atggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacaattaatctaatttt 8741893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 230 - 401
Target Start/End: Original strand, 22255179 - 22255351
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaat-tgtaatgagtaacaccccaatgtttgtacaa 328  Q
    |||||||| | || |||||||| |||| ||| ||||||| | ||||||||||| |||||||||||||  |||||||||||||||||||  ||||||||||    
T  22255179 aaggaaaactctacggtgaagtcataaaaataacttttttggtgaagttaacattataacatcaaaaaatgtaatgagtaacaccccaccgtttgtacaa 22255278  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 401  Q
    || ||| ||||||||| |  ||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  22255279 tggcatcaaaagttcagttctcatattatcatcaattcatcagattaacaagactacacttaatctaatttta 22255351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 232 - 404
Target Start/End: Complemental strand, 35511652 - 35511480
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||  ||||||||||| || | |||||| |||  ||||||||||||| ||||||||||| | |||| |||||||||| ||| |||||||| | |||    
T  35511652 ggaaaatcctatggtgaagtcatgaaaatgacgtttctgatgaagttaacattataacatcaacactgtagtgagtaacactccactgtttgtaaagtga 35511553  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcc 404  Q
    ||| ||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  35511552 catcaaaagttcagtcatcatactatcaccaattcatcagattaacaagactacacttaatctaattttatcc 35511480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 1429321 - 1429147
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||| | ||||||||||| || | ||||||| ||| | |||||||||||||||| |||||||| | || |||||||||||||| |||||||||| ||    
T  1429321 aggaaaaatctatggtgaagtcatgaaaatgactcttttggtgaagttaacactatagcatcaaaaatatagtgagtaacaccccactgtttgtacactg 1429222  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     ||| |||| |||| ||  ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  1429221 gcatcaaaaattcagtctccatagtatcatcaattcatcaaattaacaagactacatttaatctaattttatcct 1429147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 232 - 402
Target Start/End: Original strand, 15724490 - 15724658
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| | |  |||||||||||||| ||||| ||||||||    
T  15724490 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaacactataacatcaaaagttttgtgagtaacaccccactgtttatacaatga 15724589  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    || | |||||||| ||  |||| |||||||||||||||| |||||||||| |||||||||| |||||||||    
T  15724590 ca-tcaaagttcagtc-ccataatatcatcaattcatcaaattaacaagaatacacttaatttaattttat 15724658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 244 - 405
Target Start/End: Complemental strand, 27318650 - 27318489
Alignment:
Q  244 ggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttc 343  Q
    |||||||| || ||||||| ||||  | |||||||||||||| ||||| |||| |||| |||||||||| ||| ||||||||||||||||| |||||||     
T  27318650 ggtgaagtcatgagaatgatttttctggtgaagttaacactaaaacataaaaaatgtagtgagtaacacaccactgtttgtacaatgacatcaaaagttt 27318551  T
Q  344 aatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | |  ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27318550 agttctcacagtatcatcaattcatcatattaacaagactacacttaatctaattttatcct 27318489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 31786821 - 31786648
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||| |||||||  | ||||||||||||| | |||||||||||||||| ||| |||| |||| |||| |   ||||| |||||||||| ||     
T  31786821 ggaaaattctatagtgaagtagtgagaatgacttttttggtgaagttaacactatagcatgaaaaatgtagtgagcactgccccactgtttgtacagtgg 31786722  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| |||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  31786721 catcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcct 31786648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 12910348 - 12910528
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| || | ||||||||||| | ||||||||| ||||||||||||||| | || || ||||||||||| |||||||||| |    
T  12910348 aaggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactataacatcaaaaatatagtgcgtaacaccccactgtttgtacagt 12910447  T
Q  330 -----gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
         ||||| ||||||||| || |||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  12910448 acagtgacatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacatgactacacttaatctaattttatcct 12910528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 229 - 405
Target Start/End: Original strand, 19119856 - 19120032
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| ||||||||||| || ||||||||||||  | |||||||||||||||| |||||||| |||    |||||||||||| ||||||||||     
T  19119856 aaaggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaacactatagcatcaaaagtgttgctagtaacaccccactgtttgtacag 19119955  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||| ||||||||| ||  |||||| |||||||||||||| |||||||||| || ||||| ||||||||||||||    
T  19119956 tgacatcaaaagttcagtccccatagtgtcatcaattcatcagattaacaagaataaacttactctaattttatcct 19120032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 233 - 405
Target Start/End: Original strand, 32563150 - 32563322
Alignment:
Q  233 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    ||||||| ||||||||||| || | ||||| ||||  ||||||||||||||||||||||||||| |||  |||||||||| ||| ||| |||||| ||||    
T  32563150 gaaaattctatggtgaagtcattaaaatgatttttctgatgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtctgtacagtgac 32563249  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || ||||||||| ||  | || |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  32563250 atcaaaagttcagtccccttaatatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 32563322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 232 - 403
Target Start/End: Original strand, 7693230 - 7693401
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || | ||||||||||  | ||||||||||||||||||||||||| |||  ||||||||| |||| |||||||||| ||     
T  7693230 ggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacatcccactgtttgtacagtgg 7693329  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||| |||||||||||| || ||||||||||||||||| | ||||||| || ||| |||||||||||||||||    
T  7693330 catcaaaagttcaatcctcttagtatcatcaattcattagattaacatgaatacgcttaatctaattttatc 7693401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 23116397 - 23116224
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||||||| || || | |||||||||||  |||||||||||| ||||||||||||| |||| |||||| ||||||| |||||||||| ||     
T  23116397 ggaaaattctatggtgacgtcatgaaaatgactttttttatgaagttaacattataacatcaaaactgtagtgagtagcaccccactgtttgtacagtgg 23116298  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     || ||||||||| |   ||||||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  23116297 aatcaaaagttcagtttacatagtatcatcaattcatcagattaacaatattacacttaatctaattttatcct 23116224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 230 - 402
Target Start/End: Original strand, 27330304 - 27330474
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| |||||||||||  |  |||||||||||  | ||||||||||||||||||||||||| |||  |||||||||||  | ||||||||||||    
T  27330304 aaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacaccttactgtttgtacaat 27330401  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    | ||| ||||||||| || |||||||||||||||||||||| |||||  ||| ||||||||||||||||||||    
T  27330402 ggcatcaaaagttcagtcttcatagtatcatcaattcatcagattaatgagaatacacttaatctaattttat 27330474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 234 - 405
Target Start/End: Original strand, 5837557 - 5837728
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| || |||||| | || ||||||||||||  | ||||| |||||||||| |||||||| |||  |||||||||||||| |||||||||| |||||    
T  5837557 aaaattctacggtgaattcatgagaatgacttttctggtgaaggtaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgaca 5837656  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | |||| |||| ||  ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  5837657 tcaaaatttcagtctccatagtatcatcaattcatcatattaacaagaatacacttaatctaatttaatcct 5837728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 22019632 - 22019805
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    ||||| || |||||||||||||| ||||||||||||  | ||||||||| ||||||  ||||||| |||  |||||||||||||| |||||||| | |||    
T  22019632 ggaaatttctatggtgaagttattagaatgacttttctggtgaagttaaaactatagaatcaaaagtgttgtgagtaacaccccattgtttgtatagtga 22019731  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||| | ||  | ||||||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  22019732 catcaaaagttaagtccccttagtatcatcacttcatcatattaacaagaatacacttaatctaattttatcct 22019805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 234 - 405
Target Start/End: Complemental strand, 7209037 - 7208866
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    |||||| || |||||||| |||| |||||||||||  | ||||||||||| | |||||| |||| || || ||||||||||| |  ||||||||| ||||    
T  7209037 aaaattctacggtgaagtcataaaaatgactttttttggtgaagttaacattgtaacataaaaaatgcaacgagtaacaccctaccgtttgtacattgac 7208938  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || ||||||||| || || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7208937 atcaaaagttcagtcctc-tagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 7208866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 230 - 402
Target Start/End: Complemental strand, 35826660 - 35826489
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| || | |||||||||||   ||||||||| ||||||||||||||| |||| ||||||||||  || |||||||||| |    
T  35826660 aaggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaatactataacatcaaaaatgtactgagtaacacttcattgtttgtacagt 35826561  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    ||||| ||||||||| || |||||||||||||| ||||| | |||||||| || ||| |||||||||||||||    
T  35826560 gacatcaaaagttcagtcctcatagtatcatcagttcat-agattaacaataccacatttaatctaattttat 35826489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 36860421 - 36860596
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| |  | ||||| ||||  | ||||||||||||||||  || |||| |||  |||||||||||||| ||||||||||||    
T  36860421 aaggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatagtataaaaaatgttgtgagtaacaccccactgtttgtacaat 36860520  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||| ||||||||| ||  |||||||||| |||||||||| | |||||||| |||| ||||||||||||||||||    
T  36860521 gacatcaaaagttcagtccccatagtatcaacaattcatcatactaacaagagtacatttaatctaattttatcct 36860596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 232 - 402
Target Start/End: Complemental strand, 14409501 - 14409332
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || ||||||| ||||  | |||||| |||||||||||||||||| |||| |||||| ||||||| | ||  |||  ||     
T  14409501 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactataacatcaaaaatgtagtgagtagcaccccactcttaatacggtgg 14409402  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    ||| ||||||||| || |||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  14409401 catcaaaagttcagtc-tcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttat 14409332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 226 - 403
Target Start/End: Complemental strand, 17158214 - 17158035
Alignment:
Q  226 aataaaggaaaattttatggtgaagttataagaatgactttttggat---gaagttaacactataacatcaaaattgtaatgagtaacaccccaatgttt 322  Q
    |||| ||||||||| ||||||||||| |||| ||||| |||||   |   ||||||||||||||||||| |||| ||||||||||||||| |||  ||||    
T  17158214 aatataggaaaattctatggtgaagtcataaaaatgatttttttttttgtgaagttaacactataacataaaaaatgtaatgagtaacactccaccgttt 17158115  T
Q  323 gtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||||||||||| ||||||||  |||| |||||||||| ||||||||| ||||||||||||||||||| | ||||| ||||    
T  17158114 gtacaatgacatcaaaagttc-gtcattatagtatcattaattcatcagattaacaagactacacttagtataattgtatc 17158035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 405
Target Start/End: Original strand, 39572818 - 39572992
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| || ||||||||||||    | ||||||| ||||||| || |||| |||  |||||||||| ||| ||||||| || ||    
T  39572818 aggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaatactataatataaaaaatgttgtgagtaacactccactgtttgtgcagtg 39572917  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||| |  |||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  39572918 acatcaaaagttcagttctcatagtatcataaattcatcagattaacaagaatacacttaatctaattttatcct 39572992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 240 - 403
Target Start/End: Complemental strand, 43308819 - 43308656
Alignment:
Q  240 ttatggtgaagttataagaatgactttttgga-tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaa 338  Q
    |||||||||||| || |||||||||||||  | | ||||||||| ||||||||||||| |||||||| |||||||| | |||| |||||||| ||| |||    
T  43308819 ttatggtgaagtcatgagaatgactttttttagtaaagttaacattataacatcaaaaatgtaatgaataacaccc-actgttcgtacaatggcatcaaa 43308721  T
Q  339 agttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||||| || ||||||||||||||| ||||||  ||||||| |||| ||||||||||||||||||    
T  43308720 agttcagtcctcatagtatcatcaactcatcagcttaacaaaactatacttaatctaattttatc 43308656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 298 - 405
Target Start/End: Original strand, 35504431 - 35504538
Alignment:
Q  298 tgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaat 397  Q
    |||||||||||||||| ||  |||||||  ||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  35504431 tgtaatgagtaacacctcaccgtttgtatgatgacatcaaaagttcaatcattatagtatcatcaattcatcatattaacaagactacacttaatataat 35504530  T
Q  398 tttatcct 405  Q
    ||||||||    
T  35504531 tttatcct 35504538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 245 - 403
Target Start/End: Original strand, 26268087 - 26268245
Alignment:
Q  245 gtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttca 344  Q
    ||||||| || ||||||| ||||  | |||||||||||||||| |||||||| |||  |||||||||||||| |||||||||  |||||| ||||||| |    
T  26268087 gtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttttgagtaacaccccactgtttgtacggtgacatcaaaagttta 26268186  T
Q  345 atcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
     ||  ||||||||||||||||||||| |||||||||| |||| |||||| |||||||||    
T  26268187 gtccacatagtatcatcaattcatcagattaacaagaatacaattaatcaaattttatc 26268245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 402
Target Start/End: Original strand, 8466738 - 8466914
Alignment:
Q  225 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 324  Q
    |||| |||||||||| |||| ||| || || ||||||||||||  | ||||||||||||| ||||||||||| |||  ||| |||||||||  | |||||    
T  8466738 aaattaaggaaaattctatgatgaggtcatgagaatgacttttctggtgaagttaacactgtaacatcaaaagtgttgtgaataacaccccc-tctttgt 8466836  T
Q  325 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    ||| ||  || ||||||||||||  ||||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  8466837 acagtggtatcaaaagttcaatccccatagtatcatcaattcatcaaattaacaagaatacacttaatttaattttat 8466914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 36866762 - 36866935
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| |  | ||||| ||||  | ||||||||||||||||| ||||||| | |  |||||||||||||| |||||||||||||     
T  36866762 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaatattgtgagtaacaccccactgtttgtacaatgg 36866861  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| ||   ||||||||| |||||||||| | |||||||| |||| ||||||||||||||||||    
T  36866862 catcaaaagttcagtcccgatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcct 36866935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 234 - 405
Target Start/End: Complemental strand, 25501099 - 25500928
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| ||||||||||| || ||||||||||||  | | |||||||||||||| |||||||| |||  ||| ||||||| || |||||||||| || ||    
T  25501099 aaaattctatggtgaagtcatgagaatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgaataacacctcactgtttgtacactgcca 25501000  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||||||| | ||   |||||||||||||||||||| |||||||||| || ||||||| ||||||||||||    
T  25500999 tcaaaagttaagtccctatagtatcatcaattcatcagattaacaagaataaacttaatttaattttatcct 25500928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 40133385 - 40133558
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| |  | ||||||||||  | ||||||||||| ||||  ||||||| |||  |||||||||||||| | |||||||||||     
T  40133385 ggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaacattatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatgg 40133484  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| ||  |||| ||||| |||||||||| | |||||||| |||| ||||||||||||||||||    
T  40133485 catcaaaagttcagtccccataatatcaacaattcatcagactaacaagaatacatttaatctaattttatcct 40133558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 403
Target Start/End: Original strand, 33908245 - 33908404
Alignment:
Q  244 ggtgaagttataagaatga-ctttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagtt 342  Q
    |||||||| || ||||||| |||| ||| |||||| ||||||||| |||||||| |||| |||||| ||| ||| |||||||||  || ||| |||||||    
T  33908245 ggtgaagtcatgagaatgaactttctgg-tgaagtcaacactatatcatcaaaagtgtagtgagtagcactccactgtttgtacggtggcatcaaaagtt 33908343  T
Q  343 caatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    || || |||||||||||||||||  ||| |||||||||||| |||||||||||||||||||    
T  33908344 cagtcctcatagtatcatcaattattcagattaacaagactgcacttaatctaattttatc 33908404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 402
Target Start/End: Complemental strand, 28416662 - 28416532
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 371  Q
    ||||||||||||||||| ||||||| | |  ||||||||| |||| |||||||||| ||  || ||||||||||||  | || ||||||||||||||||     
T  28416662 tgaagttaacactataatatcaaaagtattgtgagtaacatcccactgtttgtacagtggaatcaaaagttcaatctccttaatatcatcaattcatcag 28416563  T
Q  372 attaacaagactacacttaatctaattttat 402  Q
    |||||||||| ||||||||||||||||||||    
T  28416562 attaacaagaatacacttaatctaattttat 28416532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 311 - 402
Target Start/End: Complemental strand, 15992636 - 15992545
Alignment:
Q  311 accccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    |||||| |||||||||| |||||| ||||||||| || |||||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  15992636 accccactgtttgtacagtgacatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagaatacacttgatctaattttat 15992545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 6824599 - 6824483
Alignment:
Q  289 catcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagt--tcaatcatcatagtatcatcaattcatcacattaacaagactaca 386  Q
    |||||||| |||  |||||||||| ||| |||||||||| |||||| ||||||  ||| || ||||||||||||||||| |||| |||||||||| ||||    
T  6824599 catcaaaagtgttgtgagtaacactccactgtttgtacagtgacatcaaaagtgttcagtcttcatagtatcatcaatttatcagattaacaagaataca 6824500  T
Q  387 cttaatctaattttatc 403  Q
    |||||||||||||||||    
T  6824499 cttaatctaattttatc 6824483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 303 - 405
Target Start/End: Complemental strand, 23954894 - 23954791
Alignment:
Q  303 tgagtaacaccccaatgtttgtacaa-tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 401  Q
    |||||||||||||| ||||| ||| | || ||| ||||||||| |   ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23954894 tgagtaacaccccactgtttttactagtggcatcaaaagttcagtttccatagtatcatcaattcatcatattaacaagactacacttaatctaatttta 23954795  T
Q  402 tcct 405  Q
    ||||    
T  23954794 tcct 23954791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 231 - 400
Target Start/End: Original strand, 35933901 - 35934063
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| || ||||||| ||||| ||||||||||||||||||  ||||||| |||  ||||||||||| || |        | ||    
T  35933901 aggaaaattgtatggtgaagtcatgagaatgatttttttgatgaagttaacactatagaatcaaaagtgttgtgagtaacacctcact-------tagtg 35933993  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
     ||| |||||| || ||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  35933994 gcatcaaaagtccagtcaccatagtatcatcaattcatcagattaacaagaatacacttaatctagtttt 35934063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 405
Target Start/End: Complemental strand, 21088870 - 21088768
Alignment:
Q  303 tgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    ||||| |||||||| ||||||||||||||||| ||||||||| ||  |||||||||| |||||||||| | |||||||| |||| ||||||||| |||||    
T  21088870 tgagtgacaccccactgtttgtacaatgacatcaaaagttcagtccccatagtatcaacaattcatcatactaacaagaatacatttaatctaactttat 21088771  T
Q  403 cct 405  Q
    |||    
T  21088770 cct 21088768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 245 - 405
Target Start/End: Original strand, 8436979 - 8437138
Alignment:
Q  245 gtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttca 344  Q
    ||||||| || ||||||| ||||| | |||| ||||||||||| | || ||| |||| ||||||||| |||| |||||||||| |||||| |||||||||    
T  8436979 gtgaagtcatgagaatgatttttttggtgaaattaacactatagcttccaaagtgtagtgagtaacatcccattgtttgtacagtgacatcaaaagttca 8437078  T
Q  345 atcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     || ||||  |||||||||  ||||| ||| |||| ||||  |||||||||||||||||||    
T  8437079 gtcctcattatatcatcaa-ccatcagatttacaaaactatgcttaatctaattttatcct 8437138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 403
Target Start/End: Original strand, 5829897 - 5830063
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataa----catcaaaattgtaatgagtaacaccccaatgtttgtaca 327  Q
    |||||||| || ||||||||  ||| ||||| ||||| | ||||||||||| |||||    ||| |||| ||||||||||||||||| |  |||||||||    
T  5829897 ggaaaattctagggtgaagtcgtaaaaatgatttttttggtgaagttaacattataattaacataaaaaatgtaatgagtaacaccctaccgtttgtaca 5829996  T
Q  328 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||||||| ||||||| | || ||||||||||||||         ||||||||||||||||||||||| ||||||||    
T  5829997 atgacatcaaaagtttagtcctcatagtatcatca---------attaacaagactacacttaatctcattttatc 5830063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 274 - 403
Target Start/End: Original strand, 42342775 - 42342902
Alignment:
Q  274 aagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacat 373  Q
    ||||||| ||||||||||||||| |||  ||||||| |||||| ||||| |||| |||||| ||||  |   ||  | ||||||||||||||||||| ||    
T  42342775 aagttaatactataacatcaaaaatgttgtgagtaataccccactgtttatacagtgacatcaaaaaatt--tccccttagtatcatcaattcatcagat 42342872  T
Q  374 taacaagactacacttaatctaattttatc 403  Q
    |||||||| |||||||||||||||||||||    
T  42342873 taacaagaatacacttaatctaattttatc 42342902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 230 - 327
Target Start/End: Complemental strand, 13956522 - 13956425
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 327  Q
    |||||||||| || |||||||| || | ||||||||||   |||||||||||||||||||||||||| |||| ||||||||||| || ||||||||||    
T  13956522 aaggaaaattctacggtgaagtcatgaaaatgacttttctcatgaagttaacactataacatcaaaactgtagtgagtaacacctcactgtttgtaca 13956425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 25668690 - 25668804
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 371  Q
    ||||||||||||| ||||||||||| |||  |||||||||||||| |||||| ||| || ||| ||||||||| ||  | ||||||||||||||||| |     
T  25668690 tgaagttaacact-taacatcaaaagtgttgtgagtaacaccccactgtttgaacagtggcatcaaaagttcagtccccttagtatcatcaattcattag 25668788  T
Q  372 attaacaagactacac 387  Q
    |||||||||| |||||    
T  25668789 attaacaagaatacac 25668804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 26317859 - 26317775
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 316  Q
    |||||||| |||| |||||| || | ||||||||||| | ||||||||||||||||||||||||| | ||| |||||||||||||    
T  26317859 ggaaaattctatgatgaagtcatgaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacacccca 26317775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 22255608 - 22255659
Alignment:
Q  265 ttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 316  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22255608 tttttgatgaagttaacactataacatcaaaaatgtaatgagtaacacccca 22255659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 369
Target Start/End: Original strand, 11898004 - 11898139
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    ||||||||| |||||||| || | ||| ||||||  | | ||||||| | |||| |||||||| || | |||||||||||| | |  ||||||| |||||    
T  11898004 aaaattttagggtgaagtcatgataataacttttctggtaaagttaatattatagcatcaaaagtgcactgagtaacaccctactagttgtacagtgaca 11898103  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatc 369  Q
    | ||||||| | || |||||||||||||||||||||    
T  11898104 tcaaaagtttagtcctcatagtatcatcaattcatc 11898139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 13956415 - 13956367
Alignment:
Q  354 gtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  13956415 gtatcatcaattcatcagattaacaaaacttcacttaatctaattttat 13956367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 21320752 - 21320799
Alignment:
Q  233 gaaaattttatggtgaagttataagaatgactttttggatgaagttaa 280  Q
    ||||||| ||||||||||| |||| ||||||||||| |||||||||||    
T  21320752 gaaaattctatggtgaagtaataaaaatgacttttttgatgaagttaa 21320799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 309
Target Start/End: Complemental strand, 16004552 - 16004474
Alignment:
Q  232 ggaaaattttatggtgaagttataagaat-gactttttggatgaagttaacactataacatcaaaattgtaatgagtaa 309  Q
    |||||||| |||||| |||| || ||||| |||||||  | ||||||||||||||||||||||||| |||  |||||||    
T  16004552 ggaaaattctatggtaaagtcatgagaattgacttttctggtgaagttaacactataacatcaaaaatgttgtgagtaa 16004474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 5748478 - 5748519
Alignment:
Q  275 agttaacactataacatcaaaattgtaatgagtaacacccca 316  Q
    ||||||||||||||| |||||| | |||||||||||||||||    
T  5748478 agttaacactataacgtcaaaaatataatgagtaacacccca 5748519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 12081334 - 12081285
Alignment:
Q  219 acaataaaataaaggaaaattttatggtgaagttataagaatgacttttt 268  Q
    ||||| || ||||| |||||| |||||||||||||| |||||||||||||    
T  12081334 acaattaattaaagaaaaattatatggtgaagttatgagaatgacttttt 12081285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 1e-57; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 33551189 - 33551016
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| || |||||||| || |||||||||||||   ||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  33551189 ggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaacactataacatcaaaaatgtagtgagtaacaccccactgtttgtacaatga 33551090  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||  || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33551089 catcaaaagttcggtcttcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 33551016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 37905709 - 37905881
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||| ||||| |||||||||||||  |||||||||||||    
T  37905709 ggaaaattctatggtgaagttataaaaatgattttttgg-tgaagttaacactataacataaaaaatgtaacgagtaacaccccaccgtttgtacaatga 37905807  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| || |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  37905808 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 37905881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 263 - 403
Target Start/End: Complemental strand, 43648416 - 43648277
Alignment:
Q  263 ctttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatca 362  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||| || |||||||| |||||||| ||||||||| |||||||||||||||||    
T  43648416 ctttttgg-tgaagttaacactataacatcaaaaatgtaatgagtaacacctcactgtttgtataatgacatcaaaagttcagtcatcatagtatcatca 43648318  T
Q  363 attcatcacattaacaagactacacttaatctaattttatc 403  Q
    | |||||| ||||||||||||||||||||||||||||||||    
T  43648317 actcatcagattaacaagactacacttaatctaattttatc 43648277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 229 - 405
Target Start/End: Complemental strand, 19289524 - 19289353
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| ||||||||||| |     |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||    
T  19289524 aaaggaaaattctatggtgaagtca-----atgacttttttgatgaagttaacactataacatcaaaaatataatgagtaacaccccattgtttgtacaa 19289430  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||| ||||||| | |  ||| ||||||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  19289429 tgacatcaaaagttaagttctcacagtatcatcaactcatcagattaataagactacacttaatctaattttatcct 19289353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 17071941 - 17071767
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| ||  |||||||||||| | ||||||||||||||||||| ||||| |||| | ||||||| | || | |||||||||||    
T  17071941 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaacactataacaacaaaaatgtagtaagtaacatctcattatttgtacaatg 17071842  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||  |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17071841 acatcaaaagttcggtattcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 17071767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 231 - 403
Target Start/End: Complemental strand, 11366585 - 11366413
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||| | |||||||||||||||| | |||| |||||||||||||||||||| |||||||||||||| | || | |||||| ||||    
T  11366585 aggaaaattctatggtgaaatcataagaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatctcactatttgtataatg 11366486  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||| |||||||||  | ||||||||||||||||||||||  |||||||||||||| ||||| ||||||||||    
T  11366485 acatcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacatttaatataattttatc 11366413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 26357577 - 26357750
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||||||||||||||| || | ||||||||||  ||||||||||||||||||||||||||| |||| ||||||||| |||| |||||||||| |||    
T  26357577 ggaaaattttatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtgagtaacatcccactgtttgtacagtga 26357676  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| |  | ||||  | |||||||||||| ||||||||||  ||||||||||||||||||||||    
T  26357677 catcaaaagttcagttcttatagagttatcaattcatcatattaacaagatcacacttaatctaattttatcct 26357750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 231 - 403
Target Start/End: Complemental strand, 19424832 - 19424660
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||||||||||||||| || |||||| |||||  | ||||||||||||||||||||||||| |||  |||||||||||||| ||||| || | ||    
T  19424832 aggaaaattttatggtgaagtcatgagaatggcttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccattgtttatatagtg 19424733  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
     ||| ||||||| | || |||||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  19424732 gcatcaaaagtttagtcctcatagtatcatcaattcatcagattaacaagaatacgcttaatctaattttatc 19424660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 17054300 - 17054126
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| ||  |||||||||||| | ||||||||| ||||||||||||||| |||| | ||||||| | || |||||||||||||    
T  17054300 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaatactataacatcaaaaatgtagtaagtaacatctcattgtttgtacaatg 17054201  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| |||||| |  |  ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  17054200 acatcaaaagtncggtattcataatatcatcaattcatcagattaacaagaccacacttaatctaattttatcct 17054126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 234 - 403
Target Start/End: Original strand, 3176941 - 3177110
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| |||||||||||||  | ||||||||||  ||||||||||| ||||||| ||||||| |||  |||||||||| | | ||||||||||||||||    
T  3176941 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaatactataatatcaaaaatgttttgagtaacacgcaactgtttgtacaatgaca 3177040  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | ||||||||| || |||||||||||||||||||||| | ||| |||| |||||||||||||||||||||    
T  3177041 tcaaaagttcagtcctcatagtatcatcaattcatcagactaagaagaatacacttaatctaattttatc 3177110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 230 - 405
Target Start/End: Complemental strand, 29242343 - 29242168
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| || | ||||  ||||| | ||||||||| |||||||||| |||| | || || ||||||||||| |||||||||| |    
T  29242343 aaggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaactataacataaaaaatatagtgcgtaacaccccactgtttgtacagt 29242244  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |  || ||||||||| || |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  29242243 ggtatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaaaactacacttaatctaattttatcct 29242168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 4264281 - 4264107
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| || | ||||||||||  | | |||||||||||||| |||||||| |||  ||||||||| |||| |||||||||| ||    
T  4264281 aggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgagtaacatcccactgtttgtacagtg 4264182  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||| ||  |||||||| |||||||||||| ||||| |||| |||||||||||||||||||||||    
T  4264181 acatcaaaagttcagtctccatagtattatcaattcatcatattaagaagaatacacttaatctaattttatcct 4264107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 234 - 400
Target Start/End: Original strand, 36641988 - 36642154
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| ||||||||||| || ||||||||||||  | |||| |||| |||||| |||||||| |||   |||||||||| || |||||||||| |||||    
T  36641988 aaaattctatggtgaagtcatgagaatgacttttctggtgaaattaatactatagcatcaaaagtgttgcgagtaacacctcactgtttgtacagtgaca 36642087  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
    | ||||||||| || |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  36642088 tcaaaagttcagtcctcatagtatcatcaattcatcaaattaacaagaatacacttaatctaatttt 36642154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 230 - 402
Target Start/End: Complemental strand, 39167568 - 39167396
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||||||||||||||| |  ||||||| ||||| |||||||||||||  |||  ||||||| | |  ||||||||||| || ||||||||||||    
T  39167568 aaggaaaattttatggtgaagtcacgagaatgatttttttgatgaagttaacagaatagtatcaaaagtattgtgagtaacacctcactgtttgtacaat 39167469  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    ||||| ||||||||| || |||||||||||||||||||| | | |||||||| |||||||| |||||||||||    
T  39167468 gacatcaaaagttcagtcctcatagtatcatcaattcattagagtaacaagaatacacttattctaattttat 39167396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 229 - 405
Target Start/End: Complemental strand, 2325576 - 2325408
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| ||||||||||||||  |||||||||||    ||||||||||| |||||||||| || |||| |||||||||||||| ||||||||||     
T  2325576 aaaggaaaattctatggtgaagttatgtgaatgacttttctcgtgaagttaacaatataacatcataaatgtattgagtaacaccccattgtttgtacac 2325477  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    || ||| ||||||||| || |||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  2325476 tggcatcaaaagttcagtcctcatagtatcatcaa--------attaacaagactacacttaatctaattttatcct 2325408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 234 - 405
Target Start/End: Complemental strand, 43771039 - 43770869
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| ||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||| |||  |||||||||||||| ||||| |||| || ||    
T  43771039 aaaattctatggtgaagtcattagaatgattttttgg-tgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtggca 43770941  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||||||||| ||  | || |||||||||||||||| |||||||||| || ||||||| ||||||||||||    
T  43770940 tcaaaagttcagtccccttaatatcatcaattcatcagattaacaagaatatacttaatttaattttatcct 43770869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 233 - 403
Target Start/End: Original strand, 13711465 - 13711635
Alignment:
Q  233 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    ||||||| ||||||||||| || ||||||||||||  | ||||||||||| |||| |||||||| |||  ||||||||||||||  ||||||||| ||||    
T  13711465 gaaaattctatggtgaagtcatcagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacagtttgtacagtgac 13711564  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    || ||||||| | ||  ||| ||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  13711565 atcaaaagtttagtccacatggtatcatcaattcatcagattaacaagaatacatttaatctaattttatc 13711635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 231 - 404
Target Start/End: Complemental strand, 27350143 - 27349970
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgac-tttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    ||||||||||||||||||||| || | ||| |  ||||| | |||||||||||||||| |||||||| |||  ||||||||||| || |||||||||| |    
T  27350143 aggaaaattttatggtgaagtcattaaaataatattttttggtgaagttaacactatagcatcaaaaatgttgtgagtaacaccacactgtttgtacagt 27350044  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcc 404  Q
    ||||| ||||||||| ||  | ||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  27350043 gacatcaaaagttcagtcc-cttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcc 27349970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 232 - 400
Target Start/End: Original strand, 4478368 - 4478537
Alignment:
Q  232 ggaaaattttatggtgaagttata-agaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    |||||||| ||| ||||||| ||| | |||||  |||| | ||||||||||||||||||||||||| |||  |||||||||| ||| |||||||||| ||    
T  4478368 ggaaaattctatagtgaagtcatagaaaatgatatttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccattgtttgtacagtg 4478467  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
     ||| ||||||| | || |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  4478468 gcatcaaaagtttagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaatttt 4478537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 230 - 403
Target Start/End: Complemental strand, 31570939 - 31570766
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| |||||||||||||| ||||| ||||||  | |||| ||||||||||||||| |||| |||  | |||||||||||| | ||| || | |    
T  31570939 aaggaaaattctatggtgaagttatgagaataacttttctggtgaaattaacactataacattaaaagtgttgtaagtaacaccccactatttttatagt 31570840  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||||| ||||||||| ||  ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  31570839 gacatcaaaagttcagtccacatagtatcatgaattcatcagattaacaagaatacacttaatctaattttatc 31570766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 234 - 403
Target Start/End: Complemental strand, 41464051 - 41463882
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| |||||||||||  | |||||||| |||| | ||||||||| ||||||| ||||||| |||  ||||||||||| || |||||||||| || ||    
T  41464051 aaaattctatggtgaagtcgtgagaatgacatttttggtgaagttaatactataaaatcaaaagtgttgtgagtaacacctcactgtttgtacagtggca 41463952  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | |||||||||||| |||||||||||||||||||||| |||||||||| |||  ||||| ||||||||||    
T  41463951 tcaaaagttcaatcctcatagtatcatcaattcatcatattaacaagaatacttttaatataattttatc 41463882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 232 - 402
Target Start/End: Original strand, 4763628 - 4763801
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaaca---ctataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    |||||||| |||| |||||| || | ||||||||||  |||||||||||||   ||||| || ||||| |||| |||||||||||||| ||||||||||     
T  4763628 ggaaaattctatgatgaagtcatgaaaatgacttttctgatgaagttaacaacactatatcaacaaaactgtagtgagtaacaccccactgtttgtacag 4763727  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    |||||| ||||||||| |   |||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  4763728 tgacatcaaaagttcagttcccatagtataatcaattcatcagattaacaaaactacacttaatctaattttat 4763801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 234 - 405
Target Start/End: Complemental strand, 33660569 - 33660398
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| ||||||||||| || | ||||||||||    | ||||||||||||||||||||||| |||  |||||||||||| | |||||||||| || ||    
T  33660569 aaaattctatggtgaagtcattaaaatgacttttctagttaagttaacactataacatcaaaagtgttgtgagtaacacccaactgtttgtacagtggca 33660470  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||||||||| || || ||||||||||||||||| | ||||||| || |||||||||||||||||||||||    
T  33660469 tcaaaagttcagtcctcttagtatcatcaattcattagattaacaggaatacacttaatctaattttatcct 33660398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 4166920 - 4167095
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| ||||||||||| |  | ||||||||||  | ||||||||||| ||||  ||||||| | |  |||||||||||||| ||||||||||||    
T  4166920 aaggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacattatagtatcaaaaatattgtgagtaacaccccactgtttgtacaat 4167019  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    | ||| ||||||||| ||  |||||||||| |||||||||| | |||||||| |||| ||||||||||||||||||    
T  4167020 ggcatcaaaagttcagtccccatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcct 4167095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 33902068 - 33902239
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||| ||||||  | ||||||||||||  | ||||||||||||||  |||| |||| |||| ||||||| |||||| |||||||| |||||    
T  33902068 ggaaaattctatgatgaagtcgttagaatgacttttctggtgaagttaacacta--acataaaaaatgtagtgagtaataccccactgtttgtaaaatga 33902165  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| || ||| |||||||||| ||||||| ||||||||||||| | |||||| |||||||||||    
T  33902166 catcaaaagttcagtcctcaaagtatcatcagttcatcagattaacaagactatatttaatcgaattttatcct 33902239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 232 - 401
Target Start/End: Original strand, 19313852 - 19314020
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| ||||||||||| || ||||||||||||  | ||||||||||| |||| |||||||| |||  |||||||||||  | | ||| |||| |||    
T  19313852 ggaaaattctatggtgaagtcattagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccttactatttatacagtga 19313951  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 401  Q
    ||| ||||||||| || | |||||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  19313952 catcaaaagttcagtcct-atagtatcatcaattcatcagattaacaagaatacacttaatcgaatttta 19314020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 35958909 - 35959021
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||| |||||| |||| ||||||||||| | |||||||  ||||||||||| |||| ||||||||| ||||||||| ||||||||||||||    
T  35958909 ggaaaattctatgatgaagtcataaaaatgacttttttggtgaagttgccactataacataaaaaatgtaatgagcaacaccccactgtttgtacaatga 35959008  T
Q  332 cattaaaagttca 344  Q
    |||||||||||||    
T  35959009 cattaaaagttca 35959021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 405
Target Start/End: Complemental strand, 33709395 - 33709262
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 371  Q
    ||||||||||||||||||||||||| |||   ||||||||| ||| |||| ||||| |||||| ||||||||| ||  |||||||||||||| |  |||     
T  33709395 tgaagttaacactataacatcaaaagtgttgcgagtaacactccactgttagtacagtgacatcaaaagttcagtccccatagtatcatcaaatattcag 33709296  T
Q  372 attaacaagactacacttaatctaattttatcct 405  Q
    |||||||||| ||| |||||||||||||||||||    
T  33709295 attaacaagaatacgcttaatctaattttatcct 33709262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 403
Target Start/End: Original strand, 44913662 - 44913834
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaat-gtttgtacaatg 330  Q
    |||||||| ||||||||||| |  | ||||||||||  | ||||||||||||| ||  ||||||| |||  ||||||||||| || | ||||||| ||||    
T  44913662 ggaaaattctatggtgaagtcacgaaaatgacttttatg-tgaagttaacactgtagtatcaaaaatgttgtgagtaacacctcacttgtttgtaaaatg 44913760  T
Q  331 acattaaaagttcaatcatc-atagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||| ||||||||||||  | |||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  44913761 acataaaaagttcaatcccccatagtatcatcaattcatcagactaacaagaatacacttaatctaattttatc 44913834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 329 - 405
Target Start/End: Original strand, 45327817 - 45327893
Alignment:
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  45327817 tgacatcaaaagttcagtcatcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcct 45327893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 399
Target Start/End: Original strand, 5881533 - 5881706
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaat-----tgtaatgagtaacaccccaatgtttgta 325  Q
    ||||||||||||| ||||||| || | ||||||||||  | ||||||| | | |||||||||||||      |||  |||||||||||||| ||||||||    
T  5881533 aggaaaattttattgtgaagtcattaaaatgacttttctggtgaagttgatattataacatcaaaacaaaagtgttgtgagtaacaccccactgtttgta 5881632  T
Q  326 caatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattt 399  Q
    || |||||| ||||||| | ||  | ||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  5881633 cagtgacatcaaaagttgagtccccttagtatcatcaattcatcatattaacaagaatacatttaatctaattt 5881706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 331 - 405
Target Start/End: Original strand, 41960939 - 41961013
Alignment:
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41960939 acatcaaaagttcagtccacatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 41961013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 405
Target Start/End: Complemental strand, 18494474 - 18494310
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| | ||||||||| || | ||||||||||  | |||||||||||||||| |||||||| |||  ||||||||||||||                
T  18494474 aaaggaaaattctgtggtgaagtcatgaaaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccac----------- 18494386  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     ||||| ||||||||| || |||||||||||||||||||||| ||| || ||| ||||||| |||||||||||||||    
T  18494385 -gacatcaaaagttcagtcctcatagtatcatcaattcatcagattcactagaatacacttgatctaattttatcct 18494310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 336 - 401
Target Start/End: Original strand, 31861956 - 31862021
Alignment:
Q  336 aaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 401  Q
    |||| |||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31861956 aaaatttcagtcattatagtatcatcaattcatcagattaacaagactacacttaatctaatttta 31862021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 234 - 402
Target Start/End: Original strand, 44285951 - 44286119
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| || |||||||| ||  |||||| ||||  |||||||||||||||||| |||||||| |||   ||| || | | || |||||||| | || ||    
T  44285951 aaaattatacggtgaagtcatgcgaatgatttttctgatgaagttaacactatagcatcaaaagtgttgcgagcaatatctcactgtttgtatagtggca 44286050  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    | ||||||| | ||  ||||||||||| ||||||||| |||||||| | ||||||||||||||||||||    
T  44286051 tcaaaagtttagtccacatagtatcataaattcatcagattaacaataatacacttaatctaattttat 44286119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 41960881 - 41960947
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 296  Q
    |||||||||| ||||||||||| |||  ||||||||||| |||||||||||||||||||||||||||    
T  41960881 aaggaaaattctatggtgaagtcatagaaatgacttttttgatgaagttaacactataacatcaaaa 41960947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 403
Target Start/End: Complemental strand, 7007053 - 7006953
Alignment:
Q  303 tgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    ||||||||| |||| |||||||||| |  ||| ||||||| | |   |||||||||||||||| || | |||||||||| ||||||||||||||||||||    
T  7007053 tgagtaacatcccactgtttgtacagtagcatcaaaagtttagttcccatagtatcatcaatttataagattaacaagaatacacttaatctaattttat 7006954  T
Q  403 c 403  Q
    |    
T  7006953 c 7006953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 41465509 - 41465591
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccc 314  Q
    |||||||| ||||||||||| || ||||||||||||  | |||||||||||||||| |||||||  |||| |||||| |||||    
T  41465509 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaggtgtagtgagtagcaccc 41465591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 19501823 - 19501764
Alignment:
Q  351 atagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 411  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||||| || |||||    
T  19501823 atagtatcatcaattcatcagattaacaa-actacatttaatctaattttattctactttg 19501764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 298
Target Start/End: Original strand, 31861895 - 31861961
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaatt 298  Q
    |||||||| |||||||||||||| ||||||||||||| | ||||||||| | ||| | |||||||||    
T  31861895 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaatattatgatatcaaaatt 31861961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 18514819 - 18514771
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 280  Q
    |||||||||||| ||||||| || ||||||||||||| |||||||||||    
T  18514819 ggaaaattttatagtgaagtcatgagaatgacttttttgatgaagttaa 18514771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 39788626 - 39788590
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttt 267  Q
    ||||||||||||||||||||| |||||||||||||||    
T  39788626 aggaaaattttatggtgaagtcataagaatgactttt 39788590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 22963400 - 22963435
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttt 267  Q
    |||||||||||||||||||| |||||||||||||||    
T  22963400 ggaaaattttatggtgaagtcataagaatgactttt 22963435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 22998077 - 22998042
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttt 267  Q
    |||||||||||||||||||| |||||||||||||||    
T  22998077 ggaaaattttatggtgaagtcataagaatgactttt 22998042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 41051382 - 41051263
Alignment:
Q  259 atgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa-tgacattaaaagttcaatcatcatagtat 357  Q
    |||||||||  ||||||| ||| |||||| |||||||| |||  ||  ||||||  || | ||||||| | || ||| ||||||||| || |||||||||    
T  41051382 atgacttttctgatgaagctaatactatagcatcaaaagtgttgtgtataacacttcactatttgtaccagtggcatcaaaagttcagtcctcatagtat 41051283  T
Q  358 catcaattcatcacattaac 377  Q
    ||||||||||||| ||||||    
T  41051282 catcaattcatcagattaac 41051263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 19093407 - 19093461
Alignment:
Q  226 aataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 280  Q
    |||||||||||||||||||||||||| || ||||||| ||||  | |||||||||    
T  19093407 aataaaggaaaattttatggtgaagtcatgagaatgatttttctggtgaagttaa 19093461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 35959023 - 35959064
Alignment:
Q  358 catcaattcatcacattaacaagactacacttaatctaattt 399  Q
    ||||||||||||| |||||||||||| |||||||| ||||||    
T  35959023 catcaattcatcatattaacaagactgcacttaatataattt 35959064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 43446511 - 43446463
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagtta 279  Q
    ||||||||| ||||||||||| || ||||||||||||| | ||||||||    
T  43446511 aggaaaattctatggtgaagtcatgagaatgactttttcggtgaagtta 43446463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 4e-54; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 229 - 400
Target Start/End: Complemental strand, 4319010 - 4318839
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    ||||||||||| ||||||||||| || ||||||||||||| | ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||     
T  4319010 aaaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaagtgttatgagtaacaccccactgtttgtacag 4318911  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
    |||||| |||||||||| |  ||||||||||||||||||| | |||||||||| ||||||||||||||||||    
T  4318910 tgacatcaaaagttcaacccccatagtatcatcaattcattagattaacaagaatacacttaatctaatttt 4318839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 230 - 403
Target Start/End: Original strand, 1945831 - 1946005
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 328  Q
    |||||||||| || |||||||| ||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  1945831 aaggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaa 1945930  T
Q  329 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||||| |||||||||  | |||||||||||| |||||||||  |||||||||||||||||||| ||||||||||    
T  1945931 tgacatcaaaagttcagccctcatagtatcatgaattcatcaagttaacaagactacacttaatataattttatc 1946005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 230 - 403
Target Start/End: Original strand, 5627389 - 5627562
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 329  Q
    |||||||||| || |||||||| |||||||||||||||| | |||||||||||||||||||| |||| | ||||||||||||||||| | |||||| |||    
T  5627389 aaggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatataatgagtaacaccccactatttgtagaat 5627488  T
Q  330 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    ||||| |||||||||  | ||||||||| ||||||||||||  |||||||||||||||||||| ||||||||||    
T  5627489 gacatcaaaagttcagccctcatagtattatcaattcatcaggttaacaagactacacttaatataattttatc 5627562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 231 - 403
Target Start/End: Complemental strand, 7055400 - 7055228
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||||||||||||||| |||||||||| ||||| | |||||||||||||||||||| |||| | |||| ||||||||| || | |||||| ||||    
T  7055400 aggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactataacataaaaaatataattagtaacacctcactatttgtagaatg 7055301  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |||| |||||||||  | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  7055300 acatcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatc 7055228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 7235218 - 7235046
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||||||||||||| ||||||||||||  | |||||| |||||||||||||||||| |||| |||||| ||||||| |||||||||  ||     
T  7235218 ggaaaattctatggtgaagttatgagaatgacttttccggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactgtttgtacggtgc 7235119  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| ||||||||| || ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||    
T  7235118 catcaaaagttcagtc-tcatagtattatcaattcatcagattaacaagactgcacttaatctaattttatcct 7235046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 29182156 - 29182336
Alignment:
Q  225 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 324  Q
    |||| ||| |||||||||||||||||| || ||||||| ||| | ||||||||||||||||||||||||||| |||  |||||||||||||| ||||| |    
T  29182156 aaattaagaaaaattttatggtgaagtcatgagaatgattttattgatgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttat 29182255  T
Q  325 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||| || ||| ||||||||| ||  |||| |||||||||||||||| ||||| |||| |||||||||||||||||||||||    
T  29182256 acagtgtcatcaaaagttcagtctccatattatcatcaattcatcagattaataagaatacacttaatctaattttatcct 29182336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 231 - 400
Target Start/End: Original strand, 8513232 - 8513401
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| || ||||||||||||  | ||||||||||||||||| ||||||| |||  |||||||||||||| |||||||||| ||    
T  8513232 aggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactgtttgtacagtg 8513331  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
    |||| ||||||||| ||  |||| |||||||||||||||| |||||||||| ||||||| ||||||||||    
T  8513332 acatcaaaagttcagtccccataatatcatcaattcatcatattaacaagaatacacttgatctaatttt 8513401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 33893186 - 33893014
Alignment:
Q  232 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 331  Q
    |||||||| |||||| |||| || ||||| | |||||   ||||||||||||||||||||||||| |||  |||||||||||||| | ||||||||||||    
T  33893186 ggaaaattctatggtaaagtcattagaataatttttttagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttgtacaatga 33893087  T
Q  332 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     |||||||||||| ||  | ||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  33893086 tattaaaagttcagtc-ccttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 33893014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 231 - 405
Target Start/End: Complemental strand, 3880124 - 3879950
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| |  ||||||||||||  | ||||||||||| ||||  ||||||| |||  |||||||||||| | |||||||||||||    
T  3880124 aggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaacattatagtatcaaaagtgttgtgagtaacaccctactgtttgtacaatg 3880025  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    |||| ||||||||||||  ||||||||||||||||||||| | |||||||| || ||||| ||||||||||||||    
T  3880024 acatcaaaagttcaatccccatagtatcatcaattcatcagactaacaagaatatacttattctaattttatcct 3879950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 248 - 405
Target Start/End: Original strand, 15491631 - 15491788
Alignment:
Q  248 aagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatc 347  Q
    ||||||| ||||||||||||    ||||||||||| | ||||||||||| |||  |||||||||||||| | |||||||| || ||| |||||||||  |    
T  15491631 aagttatgagaatgacttttctcgtgaagttaacattgtaacatcaaaagtgttgtgagtaacaccccactatttgtacagtggcatcaaaagttcagcc 15491730  T
Q  348 atcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     |||||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  15491731 ctcatagtatcatcaattcatcagattaacaagaatgcacttaatctaattttatcct 15491788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 234 - 400
Target Start/End: Original strand, 6088910 - 6089076
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| ||||||||||| || ||||||| ||||  | ||||||||||||||||  ||||||| |||  |||||||| ||||| |||||||| | || ||    
T  6088910 aaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactatagtatcaaaagtgttgtgagtaacgccccactgtttgtaaagtggca 6089009  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 400  Q
    | ||||||||| ||| ||||||||||||||||||||| |||||||||| ||  ||| ||||||||||    
T  6089010 tcaaaagttcagtcaccatagtatcatcaattcatcagattaacaagaatatccttgatctaatttt 6089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 234 - 403
Target Start/End: Complemental strand, 30353540 - 30353371
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| ||||||||||| || ||||||||||||  | ||||||||||| ||||||||||||| |||   |||||| | | || |||||||||| || ||    
T  30353540 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattataacatcaaaagtgttgcgagtaatatctcactgtttgtacagtggca 30353441  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    |  | |||||| ||  ||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  30353440 tcgatagttcagtctccatagtatcatcaattcatcatataaacaagaatacacttaatctaattttatc 30353371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 258 - 405
Target Start/End: Complemental strand, 21017270 - 21017123
Alignment:
Q  258 aatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtat 357  Q
    ||||||||||| | ||||||||||| | ||  || |||| |||  |||||||||||||| | ||||||||||| ||| ||||||||| ||  ||||||||    
T  21017270 aatgacttttttggtgaagttaacattgtagtataaaaaatgttgtgagtaacaccccattatttgtacaatggcatcaaaagttcagtccccatagtat 21017171  T
Q  358 catcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
    ||||||||||||| | |||||||| || ||||||||||||||||||||    
T  21017170 catcaattcatcagactaacaagaataaacttaatctaattttatcct 21017123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 403
Target Start/End: Complemental strand, 6091313 - 6091196
Alignment:
Q  286 taacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactac 385  Q
    |||||| |||| |||| |||||||||| ||| ||||||||||||| ||| ||||||||| |  || ||||||||||||||||| | |||||||| |||||    
T  6091313 taacataaaaaatgtagtgagtaacacaccattgtttgtacaatgccatcaaaagttcagtactcgtagtatcatcaattcattagattaacaaaactac 6091214  T
Q  386 acttaatctaattttatc 403  Q
    ||||||||||||||||||    
T  6091213 acttaatctaattttatc 6091196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 405
Target Start/End: Original strand, 33618874 - 33619007
Alignment:
Q  272 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 371  Q
    |||||| ||||||||  |||||||| |||| |||||| || |||| | |||||||  || ||| ||||||||| |  ||||||||||||||||||||||     
T  33618874 tgaagtcaacactatcgcatcaaaagtgtagtgagtagcaacccattatttgtacggtggcatcaaaagttcagttctcatagtatcatcaattcatcag 33618973  T
Q  372 attaacaagactacacttaatctaattttatcct 405  Q
    |||||||||||| |||||||||||||||||||||    
T  33618974 attaacaagactgcacttaatctaattttatcct 33619007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 233 - 411
Target Start/End: Original strand, 20768087 - 20768261
Alignment:
Q  233 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 332  Q
    ||||||| ||||||||||| || ||||||||||||  | |||||| ||||||||| |||||||| |||| |||||| || || | |||||||  | || |    
T  20768087 gaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcatcc-attgtttgtt-agtggc 20768184  T
Q  333 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 411  Q
    || ||||||||| || |||||||||||| ||||||||| |||||||||| |  |||||||||||||||||||| |||||    
T  20768185 atcaaaagttcagtcctcatagtatcattaattcatcagattaacaagatt--acttaatctaattttatcctactttg 20768261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 229 - 363
Target Start/End: Original strand, 18498430 - 18498565
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaaca-ccccaatgtttgtaca 327  Q
    ||||||||| | ||| ||||||| || |||||||||||   | ||||||||||| |||| |||||||| |||| |||| |||| |||||  |||||||||    
T  18498430 aaaggaaaaatctatagtgaagtcatgagaatgactttcctggtgaagttaacattatagcatcaaaagtgtagtgagcaacacccccacagtttgtaca 18498529  T
Q  328 atgacattaaaagttcaatcatcatagtatcatcaa 363  Q
     || ||| ||||||||| || |||||||||||||||    
T  18498530 gtggcatcaaaagttcagtcctcatagtatcatcaa 18498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 19631747 - 19631797
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 280  Q
    |||||||||| ||||||||||| |||||||||||||||  | |||||||||    
T  19631747 aaggaaaattctatggtgaagtcataagaatgacttttctggtgaagttaa 19631797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 234 - 403
Target Start/End: Original strand, 43959 - 44128
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| |||||||||||  |||||| |||||||| | |||||||||| |||||| ||||||| ||||||||||||||||||  ||||||||||||| ||    
T  43959 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 44058  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | ||||||||| || |||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||    
T  44059 taaaaagttcagtcctcatagtatcatcaattcatcagattaataagactacatttaatataattttatc 44128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 234 - 403
Target Start/End: Complemental strand, 154828 - 154659
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| |||||||||||  |||||| |||||||| | |||||||||| |||||| ||||||| ||||||||||||||||||  ||||||||||||| ||    
T  154828 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 154729  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | ||||||||| || |||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||    
T  154728 taaaaagttcagtcctcatagtatcatcaattcatcagattaataagactacatttaatataattttatc 154659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 234 - 403
Target Start/End: Complemental strand, 146199 - 146030
Alignment:
Q  234 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 333  Q
    |||||| || |||||||| |||||||||| ||||| | | ||||||||| |||||||| |||| ||||||||||||||||||| | |||||| |||||||    
T  146199 aaaattctacggtgaagtcataagaatgatttttttggttaagttaacattataacataaaaaatgtaatgagtaacaccccattatttgtagaatgaca 146100  T
Q  334 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 403  Q
    | |||||||||  | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  146099 tcaaaagttcagccttcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatc 146030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 77; Significance: 1e-35; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 258 - 402
Target Start/End: Complemental strand, 94542 - 94398
Alignment:
Q  258 aatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtat 357  Q
    ||||||||||  ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||| || ||| |||||||   ||  |||| |||    
T  94542 aatgacttttctgatgaagttaacattataacatcaaaattgtagtgagtaacaccccactgtttgtacagtggcatcaaaagtttggtccccatactat 94443  T
Q  358 catcaattcatcacattaacaagactacacttaatctaattttat 402  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||    
T  94442 catcaattcatgagattaacaagactacacttaatttaattttat 94398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 405
Target Start/End: Original strand, 133 - 307
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 330  Q
    ||||||||| ||||||||||| |  | ||||||||||  | ||||||||||||| ||  || |||| |||  |||||||||| ||| |||||||||||||    
T  133 aggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactgtagtataaaaaatgttgtgagtaacactccactgtttgtacaatg 232  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
     ||| ||||||||| || |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||    
T  233 gcatcaaaagttcagtcctcatagtatcatcaattcatcagactaacaagaatacatttaatctaattttatcct 307  T

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Target: scaffold0002; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 286 - 405
Target Start/End: Complemental strand, 408559 - 408441
Alignment:
Q  286 taacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactac 385  Q
    ||||||||||| ||||||||||||||||  |  ||||||| ||||| || ||||||||| || || ||||||||||||||||||| ||||||||||||||    
T  408559 taacatcaaaaatgtaatgagtaacaccttaccgtttgtaaaatgaaatcaaaagttcagtcctc-tagtatcatcaattcatcagattaacaagactac 408461  T
Q  386 acttaatctaattttatcct 405  Q
    ||||||||||||||||||||    
T  408460 acttaatctaattttatcct 408441  T

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Target: scaffold0002; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 284
Target Start/End: Complemental strand, 408756 - 408702
Alignment:
Q  230 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacact 284  Q
    |||||||||| ||||||||||| |||| ||||| ||||| | |||||||||||||    
T  408756 aaggaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacact 408702  T

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Target: scaffold0318 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 234 - 405
Target Start/End: Original strand, 11908 - 12082
Alignment:
Q  234 aaaattttatggtgaagttataagaa-tgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaat-gtttgta-caatg 330  Q
    |||||| ||||||||||| || |||| ||||||||  | |||| ||||||| ||||||| |||| |||  ||||||||||||| || ||||||| || ||    
T  11908 aaaattctatggtgaagtcatgagaaatgacttttctggtgaaattaacaccataacattaaaagtgttgtgagtaacacccccattgtttgtatcagtg 12007  T
Q  331 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 405  Q
      || ||||||||| || ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  12008 gtatcaaaagttcagtcctcataatatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 12082  T

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Target: scaffold0008 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 405
Target Start/End: Original strand, 267331 - 267457
Alignment:
Q  280 acactataacatcaaaattgtaatgagtaacaccccaatgttt-gtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaaca 378  Q
    |||||||| |||||||| | || ||||||||| || | ||||| ||||| || ||| ||||||||| ||   ||| |||||||||||||| | |||| ||    
T  267331 acactatagcatcaaaaatatagtgagtaacatccaactgttttgtacagtgtcatcaaaagttcagtctctataatatcatcaattcattagattagca 267430  T
Q  379 agactacacttaatctaattttatcct 405  Q
    |||||||||||||||||||||||||||    
T  267431 agactacacttaatctaattttatcct 267457  T

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Target: scaffold0009 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 42347 - 42432
Alignment:
Q  231 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 316  Q
    ||||||||||||||||||||| || ||||| | ||||  | ||||||||||||||||||||||||| |||  ||||||||||||||    
T  42347 aggaaaattttatggtgaagtcatgagaataatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacccca 42432  T

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Target: scaffold0009; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 100818 - 100885
Alignment:
Q  229 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 296  Q
    ||||||||||| ||||||||||| || ||||||| ||||| | |||||||||| ||||||||||||||    
T  100818 aaaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacgctataacatcaaaa 100885  T

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