View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2619_low_5 (Length: 249)
Name: NF2619_low_5
Description: NF2619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2619_low_5 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 8 - 249
Target Start/End: Complemental strand, 40012351 - 40012113
Alignment:
| Q |
8 |
tgaaatgaaaacctaacgaggatgatgatcagtttgaaaatctcatttcttttaacagcaagttcaactctgagaacaacaaattaggcgaatctcctag |
107 |
Q |
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| T |
40012351 |
tgaaaagaaaatctaacgaggatgatgatcagtttgaaaatctcatttcttttaacagcaagttcaactctgagaacaa---attatgcgaatctcctag |
40012255 |
T |
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| Q |
108 |
catcgattttcaaaagctaaacgagtttacctttacagaaagatatcagcaatgatgaaggcaaggcaccgacaatagaatagtcgacaatcctttattt |
207 |
Q |
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|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40012254 |
catcgattttcaaaagctaaacaaatttacctttacagaaagatatcagcaatgatgaaggcaaggcaccgacaatagaatagtcgacaatcctttattt |
40012155 |
T |
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| Q |
208 |
tacagtcagactttcatggattattaatacagcttattatga |
249 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||| |
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| T |
40012154 |
tacattcagactttcatggattattaatacagcttattatga |
40012113 |
T |
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