View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2620_low_15 (Length: 263)
Name: NF2620_low_15
Description: NF2620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2620_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 32463050 - 32463298
Alignment:
| Q |
1 |
cacacttgtacacaacaacacatgtattctattactgagggaaaattagtgttgatgtggatgattaaattgtgattggaaattagaaagtggcattata |
100 |
Q |
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| T |
32463050 |
cacacttgtacacaacaacacatgtattctattactgagggaaaattagtgttgatgtggatggttaaattgtgattagaaattagaaagtggcattata |
32463149 |
T |
|
| Q |
101 |
tcacttgaataagttagttcaagcatcaattctttcaacttaattggcaattttggctttaaattcggtactaaaattgtgct-aaaacaaattcaatcc |
199 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| ||||||||||| |
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| T |
32463150 |
tcacttgaataagttagttcaagcatcaattcattcaacttaattgggaattttggctttaaattcggtcctaaaattgtgctaaaaaaaaattcaatcc |
32463249 |
T |
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| Q |
200 |
ttaaatacaattaccgttaaaactcttgaggccttattgtttatgtgat |
248 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
32463250 |
ttaaatacaattattgttaaaactcttgaggccttattgtttatgtgat |
32463298 |
T |
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