View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2620_low_4 (Length: 371)

Name: NF2620_low_4
Description: NF2620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2620_low_4
NF2620_low_4
[»] chr1 (22 HSPs)
chr1 (1-209)||(4045496-4045704)
chr1 (309-371)||(43847735-43847797)
chr1 (309-371)||(44299075-44299138)
chr1 (311-371)||(52407376-52407436)
chr1 (311-371)||(23264136-23264197)
chr1 (311-371)||(5328850-5328911)
chr1 (311-371)||(43846216-43846277)
chr1 (219-301)||(4045014-4045089)
chr1 (312-371)||(30303086-30303146)
chr1 (317-371)||(4640377-4640432)
chr1 (311-371)||(35956300-35956361)
chr1 (312-371)||(36307665-36307726)
chr1 (331-371)||(11757148-11757188)
chr1 (312-371)||(29522053-29522113)
chr1 (315-371)||(46118124-46118180)
chr1 (309-371)||(44110209-44110272)
chr1 (311-371)||(31032059-31032121)
chr1 (311-364)||(46464550-46464604)
chr1 (312-371)||(7556108-7556168)
chr1 (312-371)||(25655678-25655738)
chr1 (312-371)||(35954238-35954298)
chr1 (311-370)||(36732471-36732531)
[»] chr7 (33 HSPs)
chr7 (309-371)||(41405948-41406011)
chr7 (309-368)||(47251976-47252036)
chr7 (311-371)||(1598906-1598966)
chr7 (309-371)||(586165-586228)
chr7 (309-371)||(33982598-33982661)
chr7 (314-371)||(37624150-37624208)
chr7 (311-371)||(38229772-38229833)
chr7 (311-371)||(47505675-47505736)
chr7 (311-370)||(8391451-8391511)
chr7 (309-368)||(38224347-38224407)
chr7 (313-371)||(41408171-41408230)
chr7 (309-371)||(43545172-43545235)
chr7 (311-371)||(584711-584772)
chr7 (311-371)||(23592550-23592611)
chr7 (311-371)||(21737442-21737502)
chr7 (311-371)||(46160726-46160786)
chr7 (309-371)||(1602402-1602465)
chr7 (314-371)||(37708368-37708426)
chr7 (312-366)||(42834002-42834056)
chr7 (311-371)||(17286337-17286398)
chr7 (309-367)||(19063914-19063974)
chr7 (309-371)||(33246747-33246810)
chr7 (311-371)||(16273920-16273982)
chr7 (314-371)||(41287568-41287626)
chr7 (311-371)||(44456907-44456969)
chr7 (311-369)||(46934241-46934299)
chr7 (311-371)||(9659021-9659082)
chr7 (311-371)||(9663697-9663758)
chr7 (312-371)||(20119885-20119946)
chr7 (311-371)||(21817357-21817417)
chr7 (312-371)||(41336130-41336191)
chr7 (311-371)||(48684574-48684635)
chr7 (343-371)||(33979407-33979435)
[»] chr3 (45 HSPs)
chr3 (311-371)||(55136627-55136687)
chr3 (309-371)||(7041579-7041641)
chr3 (312-371)||(42167543-42167603)
chr3 (309-371)||(50935470-50935533)
chr3 (312-369)||(43860481-43860539)
chr3 (311-371)||(22977839-22977900)
chr3 (311-371)||(39132432-39132493)
chr3 (309-371)||(22981393-22981456)
chr3 (309-371)||(31999825-31999888)
chr3 (309-371)||(39129068-39129130)
chr3 (309-371)||(48071732-48071795)
chr3 (311-371)||(3890783-3890844)
chr3 (311-371)||(32001221-32001282)
chr3 (311-371)||(37178254-37178315)
chr3 (311-371)||(54410692-54410753)
chr3 (309-371)||(6488930-6488993)
chr3 (309-371)||(42876998-42877061)
chr3 (309-371)||(41889698-41889763)
chr3 (311-371)||(30361654-30361715)
chr3 (311-367)||(36465597-36465654)
chr3 (311-371)||(38698796-38698857)
chr3 (311-371)||(50535967-50536028)
chr3 (311-371)||(50938513-50938574)
chr3 (311-371)||(54409371-54409432)
chr3 (311-371)||(55413161-55413222)
chr3 (311-370)||(2229437-2229497)
chr3 (309-371)||(30043630-30043694)
chr3 (311-367)||(43863171-43863227)
chr3 (309-367)||(42163302-42163361)
chr3 (312-371)||(53778447-53778506)
chr3 (309-371)||(55135205-55135268)
chr3 (311-371)||(11123632-11123694)
chr3 (311-371)||(13243560-13243622)
chr3 (311-371)||(23022012-23022074)
chr3 (311-371)||(27330125-27330187)
chr3 (311-371)||(37218179-37218241)
chr3 (311-371)||(40908476-40908538)
chr3 (311-371)||(53583691-53583753)
chr3 (312-371)||(11121085-11121146)
chr3 (312-371)||(13213299-13213360)
chr3 (311-371)||(18763901-18763962)
chr3 (311-371)||(31311678-31311739)
chr3 (312-371)||(37785292-37785353)
chr3 (312-371)||(44843337-44843398)
chr3 (343-371)||(43357894-43357922)
[»] chr4 (48 HSPs)
chr4 (310-371)||(7113857-7113919)
chr4 (309-371)||(47649409-47649472)
chr4 (312-371)||(6504268-6504328)
chr4 (312-371)||(14270101-14270160)
chr4 (309-371)||(10659162-10659224)
chr4 (309-371)||(10873307-10873369)
chr4 (309-371)||(26923816-26923879)
chr4 (311-371)||(26917644-26917705)
chr4 (311-371)||(38623615-38623676)
chr4 (311-371)||(43304847-43304908)
chr4 (311-371)||(48952788-48952849)
chr4 (311-368)||(51940858-51940915)
chr4 (313-371)||(7111062-7111121)
chr4 (309-371)||(19869717-19869780)
chr4 (309-371)||(24577916-24577979)
chr4 (311-371)||(8081203-8081264)
chr4 (311-371)||(19871237-19871297)
chr4 (330-371)||(42180217-42180258)
chr4 (311-371)||(50792702-50792763)
chr4 (316-371)||(8840236-8840292)
chr4 (316-371)||(35046217-35046272)
chr4 (309-371)||(43940382-43940446)
chr4 (309-371)||(31309423-31309486)
chr4 (311-367)||(30112170-30112227)
chr4 (311-371)||(34074963-34075024)
chr4 (311-371)||(46719690-46719751)
chr4 (311-371)||(49645787-49645848)
chr4 (309-371)||(4652796-4652860)
chr4 (312-371)||(17520087-17520147)
chr4 (312-371)||(20787198-20787258)
chr4 (312-371)||(31292758-31292818)
chr4 (312-371)||(31624678-31624738)
chr4 (312-371)||(34072866-34072926)
chr4 (312-371)||(35044897-35044957)
chr4 (309-371)||(41041599-41041663)
chr4 (311-371)||(8941229-8941291)
chr4 (311-371)||(23417210-23417272)
chr4 (311-371)||(49875720-49875782)
chr4 (312-371)||(7487074-7487135)
chr4 (311-370)||(7489261-7489322)
chr4 (311-371)||(13530045-13530106)
chr4 (311-371)||(13534721-13534782)
chr4 (311-371)||(13861925-13861986)
chr4 (311-371)||(16666661-16666722)
chr4 (311-371)||(47805607-47805668)
chr4 (311-371)||(51943688-51943749)
chr4 (312-371)||(20354232-20354292)
chr4 (312-371)||(50496287-50496347)
[»] chr5 (28 HSPs)
chr5 (309-368)||(5102987-5103047)
chr5 (309-371)||(3033076-3033139)
chr5 (309-371)||(6720884-6720947)
chr5 (311-371)||(5099860-5099921)
chr5 (311-371)||(7179671-7179732)
chr5 (311-371)||(37256386-37256447)
chr5 (309-371)||(34857953-34858016)
chr5 (311-371)||(3036408-3036469)
chr5 (311-371)||(27552665-27552726)
chr5 (309-371)||(15527275-15527338)
chr5 (318-371)||(6719494-6719548)
chr5 (311-371)||(15524123-15524184)
chr5 (311-369)||(8526292-8526351)
chr5 (311-371)||(31547476-31547538)
chr5 (311-371)||(9985371-9985432)
chr5 (311-371)||(15527416-15527477)
chr5 (309-371)||(9591615-9591679)
chr5 (309-371)||(27020215-27020279)
chr5 (311-367)||(29390984-29391042)
chr5 (311-371)||(37938504-37938566)
chr5 (311-371)||(39590712-39590774)
chr5 (312-371)||(745735-745796)
chr5 (311-371)||(19505044-19505105)
chr5 (326-367)||(37249684-37249725)
chr5 (312-371)||(39588266-39588327)
chr5 (335-371)||(8520282-8520318)
chr5 (312-371)||(34401523-34401583)
chr5 (312-371)||(37270252-37270312)
[»] scaffold0014 (2 HSPs)
scaffold0014 (311-370)||(69472-69531)
scaffold0014 (309-371)||(71829-71892)
[»] chr6 (14 HSPs)
chr6 (309-371)||(5090363-5090426)
chr6 (311-371)||(13866026-13866085)
chr6 (309-371)||(24158997-24159060)
chr6 (309-371)||(12782985-12783049)
chr6 (311-371)||(28580955-28581016)
chr6 (313-369)||(34574872-34574929)
chr6 (317-371)||(15287474-15287529)
chr6 (311-371)||(16922244-16922306)
chr6 (311-371)||(17557584-17557646)
chr6 (312-371)||(11837785-11837846)
chr6 (312-371)||(14103797-14103858)
chr6 (312-371)||(23580091-23580152)
chr6 (312-371)||(27438218-27438279)
chr6 (312-371)||(27782272-27782333)
[»] chr2 (35 HSPs)
chr2 (309-371)||(38932514-38932577)
chr2 (309-370)||(10455678-10455740)
chr2 (309-371)||(6319295-6319358)
chr2 (309-371)||(21178548-21178611)
chr2 (309-371)||(24457853-24457916)
chr2 (311-371)||(24460792-24460853)
chr2 (309-371)||(7575624-7575686)
chr2 (311-371)||(10454381-10454443)
chr2 (309-371)||(14452061-14452124)
chr2 (311-371)||(518051-518112)
chr2 (311-371)||(7296632-7296693)
chr2 (311-371)||(14454638-14454699)
chr2 (311-371)||(20919943-20920004)
chr2 (311-371)||(27479137-27479198)
chr2 (311-371)||(39159856-39159917)
chr2 (311-371)||(39209277-39209338)
chr2 (311-370)||(2290396-2290456)
chr2 (311-371)||(3753016-3753076)
chr2 (309-367)||(21191852-21191912)
chr2 (312-366)||(24520479-24520534)
chr2 (309-371)||(36603008-36603071)
chr2 (311-371)||(3849804-3849865)
chr2 (311-371)||(6322417-6322478)
chr2 (311-371)||(18248660-18248721)
chr2 (316-371)||(20919109-20919165)
chr2 (309-371)||(519690-519753)
chr2 (309-371)||(33182845-33182908)
chr2 (311-371)||(1053146-1053207)
chr2 (311-371)||(15400920-15400981)
chr2 (312-371)||(38282402-38282463)
chr2 (309-371)||(3907044-3907108)
chr2 (311-350)||(7294905-7294945)
chr2 (309-371)||(14006189-14006253)
chr2 (312-371)||(27551737-27551797)
chr2 (343-371)||(33178752-33178780)
[»] chr8 (32 HSPs)
chr8 (313-371)||(31643025-31643083)
chr8 (309-369)||(35019245-35019306)
chr8 (309-371)||(29725498-29725561)
chr8 (311-371)||(45407255-45407316)
chr8 (311-371)||(26951290-26951350)
chr8 (318-366)||(17779464-17779513)
chr8 (311-371)||(38576598-38576659)
chr8 (311-371)||(39859943-39860004)
chr8 (311-371)||(42647300-42647361)
chr8 (309-371)||(15825077-15825140)
chr8 (309-371)||(39070303-39070366)
chr8 (318-371)||(15825915-15825969)
chr8 (311-371)||(39068843-39068902)
chr8 (311-371)||(40618491-40618552)
chr8 (311-371)||(41671481-41671542)
chr8 (309-371)||(17948643-17948707)
chr8 (317-371)||(40302432-40302487)
chr8 (311-371)||(16097608-16097670)
chr8 (311-371)||(23345183-23345245)
chr8 (311-371)||(26965376-26965438)
chr8 (314-371)||(30112176-30112234)
chr8 (309-371)||(276587-276651)
chr8 (309-371)||(639198-639262)
chr8 (309-371)||(825004-825068)
chr8 (311-371)||(19143201-19143262)
chr8 (311-371)||(23627516-23627577)
chr8 (312-371)||(25583751-25583812)
chr8 (312-371)||(27911894-27911955)
chr8 (312-371)||(27958313-27958374)
chr8 (311-371)||(38362426-38362487)
chr8 (311-371)||(26920560-26920619)
chr8 (312-371)||(41544849-41544909)
[»] scaffold0208 (1 HSPs)
scaffold0208 (311-371)||(3872-3933)
[»] scaffold0009 (1 HSPs)
scaffold0009 (311-371)||(94683-94744)
[»] scaffold0779 (1 HSPs)
scaffold0779 (311-371)||(143-205)
[»] scaffold0003 (1 HSPs)
scaffold0003 (312-371)||(49083-49144)


Alignment Details
Target: chr1 (Bit Score: 175; Significance: 4e-94; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 4045704 - 4045496
Alignment:
Q  1 gcaacaactcgatcgatctcaagtatattatgatttatgtgaaatgagtagtaaaacaccatggatattccttcaagatgaacaacaataatgttgcact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4045704 gcaacaactcgatcgatctcaagtatattatgatttatgtgaaatgagtagtaaaacaccatggatattccttcaagatgaacaacaataatgttgcact 4045605  T
Q  101 tagttcttggcatgatcattcagagcaagaaacnnnnnnnnnncattgacttcctgatcattattttatgtataagtgttgttgaagatattgagtttca 200  Q
    |||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4045604 tagttcttggcatgatcattcagagcaagaaacttttttttttcattgacttcctgatcattattttatgtataagtgttgttgaagaaattgagtttca 4045505  T
Q  201 atagagaat 209  Q
    |||||||||    
T  4045504 atagagaat 4045496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 43847797 - 43847735
Alignment:
Q  309 acattaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  43847797 acattaccctctcttgtttaggggtatttacctcttcaagatatcaaccaatcaaaatgtaat 43847735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 44299075 - 44299138
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  44299075 acattaccctctcttgtttagagggtatttaccccttcaagataccaaccaatcaaaatgtaat 44299138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 52407436 - 52407376
Alignment:
Q  311 attaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  52407436 attaccctctcttggttaggggtatttaccccctcatgatatcaaccaatcaaaatgtaat 52407376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 23264197 - 23264136
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| ||||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  23264197 attaccctatcttgtttagggggtatttaccctttcaagatatcaaccaatcaaaatgtaat 23264136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 5328911 - 5328850
Alignment:
Q  311 attaccctctcttgtttaggggt-atttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||||  ||||| ||||||| |||||||| |||||||||||||||    
T  5328911 attaccctctcttgtttagggggcatttaccccttcatgatatcaatcaatcaaaatgtaat 5328850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 43846216 - 43846277
Alignment:
Q  311 attaccctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| |||| |||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  43846216 attaccctatcttatttaaggggtatttatcctttcaagatatcaactaatcaaaatgtaat 43846277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 219 - 301
Target Start/End: Complemental strand, 4045089 - 4045014
Alignment:
Q  219 gatggttaggattttcaataatattacaatgatattgaatattaaaatagagttataaaagattatatagcaaaactaaatgg 301  Q
    |||||||||| ||||||| ||||||||||||| || ||||||||||||| ||||       ||||||||||||||||||||||    
T  4045089 gatggttagggttttcaagaatattacaatgacatagaatattaaaataaagtt-------attatatagcaaaactaaatgg 4045014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 30303146 - 30303086
Alignment:
Q  312 ttaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| || ||||||  ||| ||||||||||||||||||||||||    
T  30303146 ttaccctctcttgtttaggggataattatcctctcatgatatcaaccaatcaaaatgtaat 30303086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 4640432 - 4640377
Alignment:
Q  317 ctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| || |||||| || |||||||||||||||||||||||||||||    
T  4640432 ctctcttgtttagaggatatttaccctttcaagatatcaaccaatcaaaatgtaat 4640377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 35956361 - 35956300
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||||||| ||  ||| ||||||||||||||||||| ||||    
T  35956361 attaccctctcttgtttagagggtatttaccctctcatgatatcaaccaatcaaaatataat 35956300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 36307665 - 36307726
Alignment:
Q  312 ttaccctctcttgtttag-gggta-tttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| |||||||  ||| ||||||||||||||||||||||||    
T  36307665 ttaccctctcttgtttagagggtaatttatcctctcatgatatcaaccaatcaaaatgtaat 36307726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 371
Target Start/End: Complemental strand, 11757188 - 11757148
Alignment:
Q  331 ggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  11757188 ggtatttacaccttcaagatatcaaccaatcaaaatgtaat 11757148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 29522113 - 29522053
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||| ||  ||| ||||||||||||||||||||||||    
T  29522113 ttaccctctcttgtttagagggtaattaccctgtcatgatatcaaccaatcaaaatgtaat 29522053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 46118124 - 46118180
Alignment:
Q  315 ccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||| ||||||||||||| ||| ||  ||| ||||||||||||||||||||||||    
T  46118124 ccctcttttgtttaggggtaattaccctctcatgatatcaaccaatcaaaatgtaat 46118180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 44110272 - 44110209
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||| | || ||||| || ||||||||||||||||| |||||||||||||||| ||||    
T  44110272 acattaccctattttatttagaggatatttatcccttcaagacatcaaccaatcaaaatataat 44110209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 31032121 - 31032059
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  31032121 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 31032059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 46464604 - 46464550
Alignment:
Q  311 attaccctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaa 364  Q
    |||||||||||||||||| ||||| |||||||  ||| |||||||||||||||||    
T  46464604 attaccctctcttgtttagggggtgtttatcctctcatgatatcaaccaatcaaa 46464550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 7556108 - 7556168
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||| ||  ||| |||||||| |||||||||||||||    
T  7556108 ttaccctctcttgtttagagggtaattaccctctcatgatatcaatcaatcaaaatgtaat 7556168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 25655678 - 25655738
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||| |||||||||| ||||| ||| || |||| |||||||| |||||||||||||||    
T  25655678 ttaccctttcttgtttagagggtaattaccctttcatgatatcaatcaatcaaaatgtaat 25655738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 35954238 - 35954298
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||| ||  ||| |||||||||||||| |||||||||    
T  35954238 ttaccctctcttgtttagagggtaattaccctatcatgatatcaaccaatcgaaatgtaat 35954298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 36732531 - 36732471
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaa 370  Q
    ||||||||| ||| ||||| ||||||||| || |||| ||||||||||||| |||||||||    
T  36732531 attaccctcgcttatttagagggtatttaccctttcatgatatcaaccaattaaaatgtaa 36732471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 41405948 - 41406011
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41405948 acattaccctctcttgtttagggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 41406011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 47251976 - 47252036
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgt 368  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  47251976 acattaccctctcttgtttagggggtatttaccccttcaagatatcaaccaatcaaaatgt 47252036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 1598906 - 1598966
Alignment:
Q  311 attaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||| ||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  1598906 attaccctcttttgtttaagggtatttaccctttcaagatatcaaccaatcaaaatgtaat 1598966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 586228 - 586165
Alignment:
Q  309 acattaccctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  586228 acattactctctcttatttatggggtatttaccccttcaagatatcaaccaatcaaaatgtaat 586165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 33982661 - 33982598
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||| ||||    
T  33982661 acattaccctctcttgtttagagggtatttaccccttcaagataccaaccaatcaaaatataat 33982598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 37624208 - 37624150
Alignment:
Q  314 accctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  37624208 accctctcttgtttagggggtatttaccctttcaagatatcaaccaatcaaaatgtaat 37624150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 38229833 - 38229772
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||| |||||||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  38229833 attaccatctcttgtttagagggtatttaccctttcaagatatcaaccaatcaaaatgtaat 38229772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 47505736 - 47505675
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| || |||||| ||||||| ||||||||||||||||||||||||    
T  47505736 attaccctctcttgtttagaggatatttaccccttcatgatatcaaccaatcaaaatgtaat 47505675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 8391451 - 8391511
Alignment:
Q  311 attaccctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaatgtaa 370  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| ||||||||||||||    
T  8391451 attaccctctcttgtttatggggtatttatcccctcatgatatcaaacaatcaaaatgtaa 8391511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 38224347 - 38224407
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgt 368  Q
    ||||||| || |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  38224347 acattactctatcttgtttagaggatatttatcccttcaagatatcaaccaatcaaaatgt 38224407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 41408230 - 41408171
Alignment:
Q  313 taccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||| |||| ||||||| ||||| |||||||||||||||||||||||    
T  41408230 taccctctcttgtttagagggtgtttatcctttcaatatatcaaccaatcaaaatgtaat 41408171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 43545235 - 43545172
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||| | | |||||| |||||||| |||||||||||||||||||||||    
T  43545235 acattaccctctcttgtttatgagatatttaccccttcaaaatatcaaccaatcaaaatgtaat 43545172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 584711 - 584772
Alignment:
Q  311 attaccctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| |||||||||| || |||||||||| ||||||||||||| ||||    
T  584711 attaccctctcttgtttatggggtatttaccctttcaagatataaaccaatcaaaatataat 584772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 23592550 - 23592611
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||||    
T  23592550 attaccctctcttatttagagggtatttatcctttcatgatatcaatcaatcaaaatgtaat 23592611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 21737502 - 21737442
Alignment:
Q  311 attaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| |||||| ||||||| ||  ||| ||||||||||||||||||||||||    
T  21737502 attaccctctcttatttaggtgtatttaccctctcatgatatcaaccaatcaaaatgtaat 21737442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 46160786 - 46160726
Alignment:
Q  311 attaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||| ||||||||||||||||||||||| |  || ||||||||||||||| ||||||||||    
T  46160786 attaacctctcttgtttaggggtatttacctttttaagatatcaaccaattaaaatgtaat 46160726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 1602465 - 1602402
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||| |||||||  |||||||||| |||| |||||||||| |||||||||||||||    
T  1602465 acattaccctcttttgtttatagggtatttattcctttaagatatcaatcaatcaaaatgtaat 1602402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 37708426 - 37708368
Alignment:
Q  314 accctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||| |||||||||  | || ||||||||||||||||||||||||||    
T  37708426 accctctcttgtttagagggtatttactcttttaagatatcaaccaatcaaaatgtaat 37708368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 366
Target Start/End: Complemental strand, 42834056 - 42834002
Alignment:
Q  312 ttaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaat 366  Q
    ||||||| ||||||||||||||| ||| |||||||| ||||||| ||||||||||    
T  42834056 ttaccctatcttgtttaggggtacttaccccttcaaaatatcaatcaatcaaaat 42834002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 17286337 - 17286398
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||||||| ||  ||| |||||||| |||||||||||||||    
T  17286337 attaccctctcttgtttagagggtatttaccctctcatgatatcaatcaatcaaaatgtaat 17286398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 367
Target Start/End: Original strand, 19063914 - 19063974
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatccctt-caagatatcaaccaatcaaaatg 367  Q
    ||||||||||||||||||||| || |||||  ||||| |||||||||||||||||||||||    
T  19063914 acattaccctctcttgtttagaggatattttaccctttcaagatatcaaccaatcaaaatg 19063974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 33246810 - 33246747
Alignment:
Q  309 acattaccctctcttgtttaggggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| |||| ||  | || ||| ||||||||||||||||||||||||    
T  33246810 acattaccctctcttgtttagaggtaatttactctctcatgatatcaaccaatcaaaatgtaat 33246747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 16273920 - 16273982
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  16273920 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 16273982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 41287568 - 41287626
Alignment:
Q  314 accctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||| ||||||||| ||  ||| ||||||||| ||||||||||||||    
T  41287568 accctctcttgtttagagggtatttaccctctcatgatatcaactaatcaaaatgtaat 41287626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 44456907 - 44456969
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  44456907 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 44456969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 369
Target Start/End: Original strand, 46934241 - 46934299
Alignment:
Q  311 attaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgta 369  Q
    ||||| |||| || |||||||||||||| || || | ||||||||||||||||||||||    
T  46934241 attactctcttttctttaggggtatttacccatttatgatatcaaccaatcaaaatgta 46934299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 9659021 - 9659082
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| |||||||||| ||||||||| ||  ||| ||||| ||||||||||||||||||    
T  9659021 attaccctatcttgtttagagggtatttaccctctcatgatataaaccaatcaaaatgtaat 9659082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 9663758 - 9663697
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||| |||  |  ||| ||||||||||||||||||||||||    
T  9663758 attaccctctcttgtttagagggtaattactctctcatgatatcaaccaatcaaaatgtaat 9663697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 20119885 - 20119946
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  20119885 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 20119946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 21817417 - 21817357
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| || ||||||||||||||||||||||||    
T  21817417 attaccctctcttatttagagggtattttaccct-catgatatcaaccaatcaaaatgtaat 21817357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 41336130 - 41336191
Alignment:
Q  312 ttaccctctcttgtttag-gggta-tttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| |||||||  ||| |||||||| |||||||||||||||    
T  41336130 ttaccctctcttgtttagagggtaatttatcctctcatgatatcaatcaatcaaaatgtaat 41336191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 48684635 - 48684574
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| || |||||| || || | ||||||||||||||||||||||||    
T  48684635 attaccctctcttatttagaggatatttacccttttatgatatcaaccaatcaaaatgtaat 48684574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 371
Target Start/End: Original strand, 33979407 - 33979435
Alignment:
Q  343 ttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||||||||||||    
T  33979407 ttcaagatatcaaccaatcaaaatgtaat 33979435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 55136687 - 55136627
Alignment:
Q  311 attaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  55136687 attaccctctcttgtttaggggtatttatccttttaagatatcaaccaatcaaaatgtaat 55136627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 7041579 - 7041641
Alignment:
Q  309 acattaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  7041579 acattatcctctcttgtttagaggtatttatcctttcaagatatcaaccaatcaaaatgtaat 7041641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 42167603 - 42167543
Alignment:
Q  312 ttaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||    
T  42167603 ttaccctctcttgtttatgaggtatttaccccttcaagatatcaaccaatcaaaatgtaat 42167543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 50935470 - 50935533
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||| ||||    
T  50935470 acattaccctctcttgtttagagggtatttaccctttcaagatatcaaccaatcaaaatataat 50935533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 43860481 - 43860539
Alignment:
Q  312 ttaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgta 369  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||    
T  43860481 ttaccctctcttgtttaggaggtatttacccctttaagatatcaaccaatcaaaatgta 43860539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 22977839 - 22977900
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||||| |||||| || || ||||||||||||||||||||||||||    
T  22977839 attaccctctcttgtttagggggtatttacccttttaagatatcaaccaatcaaaatgtaat 22977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 39132493 - 39132432
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||| |||||| |||||||| |||||||||||||||||||||||    
T  39132493 attaccctctcttgtttaagggatatttaccccttcaaaatatcaaccaatcaaaatgtaat 39132432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 22981456 - 22981393
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||| |||||||||| || |||||| |||||||||||||||||||||||||| |||||    
T  22981456 acattaccctgtcttgtttagaggatatttaccccttcaagatatcaaccaatcaaaacgtaat 22981393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 31999825 - 31999888
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| ||||||||||||  | |||||| ||||||||||||||||||||||||||||||||    
T  31999825 acattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 31999888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 39129068 - 39129130
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||| |||||||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  39129068 acattaccctatcttgtttagagggtattta-ccctttaagatatcaaccaatcaaaatgtaat 39129130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 48071732 - 48071795
Alignment:
Q  309 acattaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||||| |||||||| || || ||||||||||||||||||||| ||||    
T  48071732 acattaccctctcttgtttaggaggtatttacccttttaagatatcaaccaatcaaaatataat 48071795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 3890783 - 3890844
Alignment:
Q  311 attaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| |||||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  3890783 attaccctatcttgtttagagagtatttaccccttcatgatatcaaccaatcaaaatgtaat 3890844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 32001282 - 32001221
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| |||||||| |||||| || ||||| |||||||||||||||||||||||    
T  32001282 attaccctctcttatttagggggtatttaccctttcaaaatatcaaccaatcaaaatgtaat 32001221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 37178254 - 37178315
Alignment:
Q  311 attaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| | ||||| | ||||||| ||||||||||||||||||||||||    
T  37178254 attaccctctcttgtttagagcgtattaaccccttcatgatatcaaccaatcaaaatgtaat 37178315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 54410753 - 54410692
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||||||    
T  54410753 attaccctatcttgtttagagggtatttacccctaaaagatatcaaccaatcaaaatgtaat 54410692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 6488930 - 6488993
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||| | ||||||||||| |||||| ||||||||||||||||||| ||||||| ||||    
T  6488930 acattaccctattttgtttagggggtatttaccccttcaagatatcaaccagtcaaaatataat 6488993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 42876998 - 42877061
Alignment:
Q  309 acattaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||| |||| |||||||||||| ||||||| | |||||||||||||| |||||||||||||||    
T  42876998 acattcccctatcttgtttagggagtatttacctcttcaagatatcaatcaatcaaaatgtaat 42877061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 41889763 - 41889698
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttat--cccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| |||||||| |  |||||||| |||| ||||||||||||||||||    
T  41889763 acattaccctctcttgtttagagggtatttttaccccttcaaaatattaaccaatcaaaatgtaat 41889698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 30361654 - 30361715
Alignment:
Q  311 attaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| ||||||||||  |||||||||||||| | ||||||||||||| ||||||||||    
T  30361654 attaccctatcttgtttagaaggtatttatcccttaatgatatcaaccaattaaaatgtaat 30361715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 36465597 - 36465654
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatg 367  Q
    ||||||||||||||||||| ||||||||| |  ||||| |||||||||||||||||||    
T  36465597 attaccctctcttgtttagagggtatttaccttttcaacatatcaaccaatcaaaatg 36465654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 38698857 - 38698796
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| || |||||| ||  ||| ||||||||||||||||||||||||    
T  38698857 attaccctctcttgtttagaggatatttaccctctcatgatatcaaccaatcaaaatgtaat 38698796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 50535967 - 50536028
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||  ||||||||| ||  ||| ||||||||||||||||||||||||    
T  50535967 attaccctctcttgtttatagggtatttaccctctcatgatatcaaccaatcaaaatgtaat 50536028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 50938574 - 50938513
Alignment:
Q  311 attaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||| ||||||||||||||  |||||||| || |||||||||||||||||| ||||||||||    
T  50938574 attatcctctcttgtttagaaggtatttaccctttcaagatatcaaccaattaaaatgtaat 50938513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 54409371 - 54409432
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| ||||||||||||| |||||| |  |||||||||| ||||||||||||||||||    
T  54409371 attaccctatcttgtttagggggtatttaccttttcaagatataaaccaatcaaaatgtaat 54409432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 55413222 - 55413161
Alignment:
Q  311 attaccctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| ||||||||| |||||||||||||  | | ||||||||||||||||||||||||    
T  55413222 attaccctttcttgtttaaggggtatttatcctcttatgatatcaaccaatcaaaatgtaat 55413161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 2229497 - 2229437
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaa 370  Q
    |||| ||| |||||||||| || ||||||||| || |||||||||||||||||||||||||    
T  2229497 attatcctatcttgtttagaggatatttatccttttaagatatcaaccaatcaaaatgtaa 2229437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 30043694 - 30043630
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  30043694 acattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 30043630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 43863227 - 43863171
Alignment:
Q  311 attaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatg 367  Q
    ||||||||||||| |  ||||||||||| || || ||||||||||||||||||||||    
T  43863227 attaccctctcttatacaggggtatttacccttttaagatatcaaccaatcaaaatg 43863171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 367
Target Start/End: Original strand, 42163302 - 42163361
Alignment:
Q  309 acattaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatg 367  Q
    |||||| ||||||||||| |||| ||||||| |  |||||||||||||||||||||||||    
T  42163302 acattatcctctcttgttcagggagtatttaccatttcaagatatcaaccaatcaaaatg 42163361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 53778506 - 53778447
Alignment:
Q  312 ttaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||| || || ||||||  |||  |||||||||||||||||||||||    
T  53778506 ttaccctctcttgtttatggatacttatcctctcataatatcaaccaatcaaaatgtaat 53778447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 55135205 - 55135268
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||| |||||||||||||| || |||||| ||||  ||||||||||||||||| ||||||||    
T  55135205 acattatcctctcttgtttagaggatatttacccctaaaagatatcaaccaatcataatgtaat 55135268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 11123694 - 11123632
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  11123694 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 11123632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 13243622 - 13243560
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  13243622 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 13243560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 23022074 - 23022012
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  23022074 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 23022012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 27330125 - 27330187
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  27330125 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 27330187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 37218179 - 37218241
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  37218179 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 37218241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 40908538 - 40908476
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  40908538 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 40908476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 53583753 - 53583691
Alignment:
Q  311 attaccctctcttgtttag-gggtattt-atcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| |||||||| ||||  ||| ||||||||||||||||||||||||    
T  53583753 attaccctctcttatttagagggtattttatcctctcatgatatcaaccaatcaaaatgtaat 53583691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 11121085 - 11121146
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  11121085 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 11121146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 13213299 - 13213360
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  13213299 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 13213360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 18763962 - 18763901
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||| |||||| ||||| ||||||||||||  ||| |||||||||||||||| |||||||    
T  18763962 attaccttctcttatttagagggtatttatcctctcatgatatcaaccaatcaagatgtaat 18763901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 31311678 - 31311739
Alignment:
Q  311 attaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| | ||||||| ||  ||| ||||| ||||||||||||||||||    
T  31311678 attaccctctcttgtttagagcgtatttaccctctcatgatataaaccaatcaaaatgtaat 31311739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 37785292 - 37785353
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  37785292 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 37785353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 44843398 - 44843337
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  44843398 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 44843337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 371
Target Start/End: Original strand, 43357894 - 43357922
Alignment:
Q  343 ttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||||||||||||    
T  43357894 ttcaagatatcaaccaatcaaaatgtaat 43357922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 310 - 371
Target Start/End: Complemental strand, 7113919 - 7113857
Alignment:
Q  310 cattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  7113919 cattaccctctcttgtttagagggtatttaccccttcaagatatcaaccaatcaaaatgtaat 7113857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 47649409 - 47649472
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  47649409 acattaccctatcttgtttagagggtatttaccccttcaagatatcaaccaatcaaaatgtaat 47649472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 6504268 - 6504328
Alignment:
Q  312 ttaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||    
T  6504268 ttaccctctcttgtttagggggtatttacctcttcaagatatcaaccaatcaaaatgtaat 6504328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 14270160 - 14270101
Alignment:
Q  312 ttaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  14270160 ttaccctctcttgtttagggggtattta-cccttcaagatatcaaccaatcaaaatgtaat 14270101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 10659224 - 10659162
Alignment:
Q  309 acattaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  10659224 acattaccctctcttgtttagagagtattta-cccttcaagatatcaaccaatcaaaatgtaat 10659162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 10873369 - 10873307
Alignment:
Q  309 acattaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  10873369 acattaccctctcttgtttagagagtattta-cccttcaagatatcaaccaatcaaaatgtaat 10873307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 26923879 - 26923816
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||||||    
T  26923879 acattaccctctcttgtttagaggatatttaccacttcaagatatcaaccaatcaaaatgtaat 26923816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 26917644 - 26917705
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||| |||||| || |||||||||||||||||||||||||||||    
T  26917644 attaccctctcttgtttaagggatatttaccctttcaagatatcaaccaatcaaaatgtaat 26917705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 38623676 - 38623615
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||||||| || ||||||||||||| |||||||||||||||    
T  38623676 attaccctctcttgtttagagggtatttaccctttcaagatatcaatcaatcaaaatgtaat 38623615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 43304908 - 43304847
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||||||| || |||| ||||||||||||||||||||||||    
T  43304908 attaccctctcttgtttagagggtatttaccctttcatgatatcaaccaatcaaaatgtaat 43304847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 48952788 - 48952849
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||| ||||||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  48952788 attaccttctcttgtttagggggtatttaccctttcaagatatcaaccaatcaaaatgtaat 48952849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 51940858 - 51940915
Alignment:
Q  311 attaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgt 368  Q
    ||||| || |||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  51940858 attactctttcttgtttagggatatttatcccttcaagatatcaatcaatcaaaatgt 51940915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 371
Target Start/End: Original strand, 7111062 - 7111121
Alignment:
Q  313 taccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||| ||||||||| || |||||||||||||| ||||||||||||||    
T  7111062 taccctctcttgtttagagggtatttaccctttcaagatatcaactaatcaaaatgtaat 7111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 19869717 - 19869780
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||| |||||||||||||  ||||||||| || |||||||||||||||||||||||||||||    
T  19869717 acattatcctctcttgtttatagggtatttaccctttcaagatatcaaccaatcaaaatgtaat 19869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 24577979 - 24577916
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||  ||||||||| || ||||||||||||||||||||||| |||||    
T  24577979 acattaccctctcttgtttatagggtatttaccctttcaagatatcaaccaatcaaaaggtaat 24577916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 8081264 - 8081203
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||||| |||||| |  |||||||||||||||||| ||||||||||    
T  8081264 attaccctctcttgtttagggggtatttaccatttcaagatatcaaccaattaaaatgtaat 8081203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 19871297 - 19871237
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||||||| || ||||| |||||||||||||||||||||||    
T  19871297 attaccctctcttgtttagagggtatttaccctttcaa-atatcaaccaatcaaaatgtaat 19871237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 371
Target Start/End: Complemental strand, 42180258 - 42180217
Alignment:
Q  330 gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  42180258 gggtatttatcccttcatgatatcaaccaatcaaaatgtaat 42180217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 50792763 - 50792702
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||| |||||||||||  ||||||||| || |||||||||||||||||||||||||||||    
T  50792763 attaccttctcttgtttaaagggtatttaccctttcaagatatcaaccaatcaaaatgtaat 50792702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 316 - 371
Target Start/End: Original strand, 8840236 - 8840292
Alignment:
Q  316 cctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| |||||||||| || ||||||||||||| |||||||||||||||    
T  8840236 cctctcttgtttaaggggtatttaccctttcaagatatcaatcaatcaaaatgtaat 8840292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 316 - 371
Target Start/End: Complemental strand, 35046272 - 35046217
Alignment:
Q  316 cctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  35046272 cctctcttgtttagagggtatttatccct-catgatatcaaccaatcaaaatgtaat 35046217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 43940446 - 43940382
Alignment:
Q  309 acattaccctctcttgtttag-gggta-tttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| ||||| |||| ||||| |||||||||| |||||||||||||||    
T  43940446 acattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaat 43940382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 31309423 - 31309486
Alignment:
Q  309 acattaccctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||| |||||| ||| ||  ||| ||||||||||||||||||||||||    
T  31309423 acattaccctctcttgtttagggggtaattaccctctcatgatatcaaccaatcaaaatgtaat 31309486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 30112170 - 30112227
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatg 367  Q
    ||||||||||||||||||  ||||||||| || ||||| |||||||||||||||||||    
T  30112170 attaccctctcttgtttatagggtatttaccctttcaaaatatcaaccaatcaaaatg 30112227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 34075024 - 34074963
Alignment:
Q  311 attaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||| ||||||||||||  | ||||||| ||||||| ||||||||||||||||||||||||    
T  34075024 attactctctcttgtttaaagtgtatttaccccttcatgatatcaaccaatcaaaatgtaat 34074963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 46719751 - 46719690
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||| ||  ||| ||||||||||||||||||||||||    
T  46719751 attaccctctcttatttagagggtatttaccctctcatgatatcaaccaatcaaaatgtaat 46719690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 49645787 - 49645848
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||| ||||||||||  |||||||||||| || ||||||||||||||| ||||||||||    
T  49645787 attacccactcttgtttaaagggtatttatccttttaagatatcaaccaattaaaatgtaat 49645848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 4652796 - 4652860
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  4652796 acattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 4652860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 17520147 - 17520087
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||||||  ||| |||||||| |||||||||||||||    
T  17520147 ttaccctctcttgtttagagggtaattatcctctcatgatatcaatcaatcaaaatgtaat 17520087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 20787258 - 20787198
Alignment:
Q  312 ttaccctctcttgtttaggggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| |||| ||  |||| ||| ||||||||||||||||||||||||    
T  20787258 ttaccctctcttgtttagaggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 20787198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 31292818 - 31292758
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||| ||  ||| ||||||||||||||||||||||||    
T  31292818 ttaccctctcttgtttagagggtaattaccctctcatgatatcaaccaatcaaaatgtaat 31292758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 31624738 - 31624678
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||| ||||| ||||||||| || || ||||||| ||||||||||||||||||    
T  31624738 ttaccctctcttatttagagggtatttacccttttaagatattaaccaatcaaaatgtaat 31624678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 34072866 - 34072926
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||| ||  ||| ||||||||||||||||||||||||    
T  34072866 ttaccctctcttgtttagagggtaattaccctctcatgatatcaaccaatcaaaatgtaat 34072926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 35044897 - 35044957
Alignment:
Q  312 ttaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| ||||||||| || || |||||  |||||||||||||||||||||||||||||    
T  35044897 ttaccctcacttgtttagaggataattatcatttcaagatatcaaccaatcaaaatgtaat 35044957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 41041663 - 41041599
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  41041663 acattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 41041599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 8941291 - 8941229
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  8941291 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 8941229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 23417210 - 23417272
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  23417210 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 23417272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 49875782 - 49875720
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||||||  || | ||| ||||||||||||||||||||||||    
T  49875782 attaccctctcttgtttagagggtattttaccttctcatgatatcaaccaatcaaaatgtaat 49875720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 7487074 - 7487135
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  7487074 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 7487135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 7489322 - 7489261
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccctt-caagatatcaaccaatcaaaatgtaa 370  Q
    ||||||||||||| ||||| ||||||||  ||||| || |||||||||||||||||||||||    
T  7489322 attaccctctcttatttagagggtattttaccctttcatgatatcaaccaatcaaaatgtaa 7489261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 13530045 - 13530106
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| |||||||||| ||||||||| ||  ||| ||||| ||||||||||||||||||    
T  13530045 attaccctatcttgtttagagggtatttaccctctcatgatataaaccaatcaaaatgtaat 13530106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 13534782 - 13534721
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||| |||  |  ||| ||||||||||||||||||||||||    
T  13534782 attaccctctcttgtttagagggtaattactctctcatgatatcaaccaatcaaaatgtaat 13534721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 13861986 - 13861925
Alignment:
Q  311 attaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||| |||||||||||||| ||||||||   | ||| ||||||||||||||||||||||||    
T  13861986 attacactctcttgtttaggaggtatttacttcctcatgatatcaaccaatcaaaatgtaat 13861925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 16666722 - 16666661
Alignment:
Q  311 attaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| |||||  |||||||| ||  ||| ||||||||||||||||||||||||    
T  16666722 attaccctctcttatttagaaggtatttaccctctcatgatatcaaccaatcaaaatgtaat 16666661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 47805607 - 47805668
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| |||||||||| || |||||| ||  ||| ||||||||||||||||||||||||    
T  47805607 attaccctatcttgtttagaggatatttaccctctcatgatatcaaccaatcaaaatgtaat 47805668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 51943749 - 51943688
Alignment:
Q  311 attaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||| |||||||||||| | |||||||| || || ||||||| ||||||||||||||||||    
T  51943749 attactctctcttgtttacgaggtatttacccttttaagatattaaccaatcaaaatgtaat 51943688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 20354292 - 20354232
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  ||  ||| ||||||||||||||||||||||||    
T  20354292 ttaccctctcttgtttagagggtaatttacctctcatgatatcaaccaatcaaaatgtaat 20354232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 50496347 - 50496287
Alignment:
Q  312 ttaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| || ||| ||  | | ||||||||||||||||||||||||    
T  50496347 ttaccctctcttgtttagggggtaattaccctctaatgatatcaaccaatcaaaatgtaat 50496287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 309 - 368
Target Start/End: Complemental strand, 5103047 - 5102987
Alignment:
Q  309 acattaccctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaatgt 368  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  5103047 acattaccctctcttgtttatggggtatttaccccttcaagatatcaaccaatcaaaatgt 5102987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 3033076 - 3033139
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  3033076 acattaccctctcttgtttagagggtatttaccccttcaaaatatcaaccaatcaaaatgtaat 3033139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 6720947 - 6720884
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  6720947 acattaccctatcttgtttagagggtatttatcccttcaagatatcaatcaatcaaaatgtaat 6720884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 5099860 - 5099921
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  5099860 attaccctctcttgtttagggggtatttaccctttcaagatatcaaccaatcaaaatgtaat 5099921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 7179671 - 7179732
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  7179671 attaccctctcttgtttagagggtatttaccccttcatgatatcaaccaatcaaaatgtaat 7179732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 37256447 - 37256386
Alignment:
Q  311 attaccctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  37256447 attactctctcttgtttaaggggtatttatcccttcaaaatatcaaccaatcaaaatgtaat 37256386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 34857953 - 34858016
Alignment:
Q  309 acattaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||| |||||||||| ||||||| || |||||||||||||||||||||||||||||    
T  34857953 acattaccctcttttgtttagggagtatttaccctttcaagatatcaaccaatcaaaatgtaat 34858016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 3036469 - 3036408
Alignment:
Q  311 attaccctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||| |||| || ||||||||||||| |||||||||||||||||||||||||||||    
T  3036469 attaccctcttttgtataaggggtatttatcctttcaagatatcaaccaatcaaaatgtaat 3036408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 27552726 - 27552665
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  27552726 attactctcttttgtttagagggtatttatcccttcatgatatcaaccaatcaaaatgtaat 27552665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 15527338 - 15527275
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||| ||||||||| ||| ||||||||| || |||||||||||||||||||||||||||||    
T  15527338 acattactctctcttgtctagagggtatttaccctttcaagatatcaaccaatcaaaatgtaat 15527275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 371
Target Start/End: Original strand, 6719494 - 6719548
Alignment:
Q  318 tctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  6719494 tctcttgtttaggggatatttaccctttcaagatatcaaccaatcaaaatgtaat 6719548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 15524123 - 15524184
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||| |||||||||||| || |||||| || |||||||||||||||||||||||||||||    
T  15524123 attaccttctcttgtttagaggatatttaccctttcaagatatcaaccaatcaaaatgtaat 15524184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 311 - 369
Target Start/End: Complemental strand, 8526351 - 8526292
Alignment:
Q  311 attaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgta 369  Q
    |||||||||||||||||| | |||||||| || |||||||||||| ||||||||||||||    
T  8526351 attaccctctcttgtttaagaggtatttaccctttcaagatatcagccaatcaaaatgta 8526292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 31547476 - 31547538
Alignment:
Q  311 attaccctctcttgtttag-gggtattt-atcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| |||||||||| |||||||| | ||||||| ||||||||||||||||||||||||    
T  31547476 attaccctttcttgtttagagggtattttaccccttcatgatatcaaccaatcaaaatgtaat 31547538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 9985371 - 9985432
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| |||||||||  | |||| ||||||||| ||||||||||||||    
T  9985371 attaccctctcttgtttagagggtatttactcattcatgatatcaactaatcaaaatgtaat 9985432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 15527477 - 15527416
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||||||| ||  | | ||||||||||||||||||||||||    
T  15527477 attaccctctcttgtttagagggtatttaccctcttatgatatcaaccaatcaaaatgtaat 15527416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 9591615 - 9591679
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  9591615 acattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 9591679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 27020279 - 27020215
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  27020279 acattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 27020215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 29391042 - 29390984
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccctt-caagatatcaaccaatcaaaatg 367  Q
    ||||||||||||||||||| ||||||||  ||||| |||||| ||||||||||||||||    
T  29391042 attaccctctcttgtttagagggtattttaccctttcaagatttcaaccaatcaaaatg 29390984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 37938504 - 37938566
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  37938504 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 37938566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 39590774 - 39590712
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  39590774 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 39590712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 745796 - 745735
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  745796 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 745735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 19505105 - 19505044
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||||||| ||  ||| ||||||||  ||||||||||||||    
T  19505105 attaccctctcttgtttagagggtatttaccctctcatgatatcaattaatcaaaatgtaat 19505044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 367
Target Start/End: Original strand, 37249684 - 37249725
Alignment:
Q  326 ttaggggtatttatcccttcaagatatcaaccaatcaaaatg 367  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  37249684 ttaggggtatttaccctttcaatatatcaaccaatcaaaatg 37249725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 39588266 - 39588327
Alignment:
Q  312 ttaccctctcttgtttag-gggta-tttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| |||||||  |||  |||||||||||||||||||||||    
T  39588266 ttaccctctcttgtttagagggtaatttatcctctcataatatcaaccaatcaaaatgtaat 39588327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 8520282 - 8520318
Alignment:
Q  335 tttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  8520282 tttaccccttcaagttatcaaccaatcaaaatgtaat 8520318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 34401523 - 34401583
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| |||  |  ||| ||||||||||||||||||||||||    
T  34401523 ttaccctctcttgtttagagggtaattactctctcatgatatcaaccaatcaaaatgtaat 34401583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 37270252 - 37270312
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||| ||  | | ||||||||||||||||||||||||    
T  37270252 ttaccctctcttgtttagagggtaattaccctattatgatatcaaccaatcaaaatgtaat 37270312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 69472 - 69531
Alignment:
Q  311 attaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaa 370  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  69472 attaccctatcttgtttaggggtatttattctttcaagatatcaaccaatcaaaatgtaa 69531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 71892 - 71829
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||| ||||||||||||||||| |||||| || ||||||||||||| |||||||||||||||    
T  71892 acattatcctctcttgtttaggggatatttaccctttcaagatatcaatcaatcaaaatgtaat 71829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 5090426 - 5090363
Alignment:
Q  309 acattaccctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||    
T  5090426 acattaccctctcttgttcaaggggtatttaccccttcaagatatcaaccaatcaaaatgtaat 5090363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 13866026 - 13866085
Alignment:
Q  311 attaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| |||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  13866026 attaccctatcttgtttaggg-tatttacccgttcaagatatcaaccaatcaaaatgtaat 13866085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 24158997 - 24159060
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||| ||||||||||| |||||| |||||| |||||||||||||||||||| ||||    
T  24158997 acattaccctcttttgtttagggggtatttaccccttctagatatcaaccaatcaaaatataat 24159060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 12782985 - 12783049
Alignment:
Q  309 acattaccctctcttgtttagggg--tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||| ||||||||  ||||||||||||||| ||||||| ||| |||||||||||    
T  12782985 acattaccctctcttatttaggggggtatttatcccttcaatatatcaatcaaccaaaatgtaat 12783049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 28581016 - 28580955
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||||||||||  ||| ||||| ||||||||||||||||||    
T  28581016 attaccctctcttgtttagagggtatttatcctctcatgatataaaccaatcaaaatgtaat 28580955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 34574929 - 34574872
Alignment:
Q  313 taccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgta 369  Q
    ||||||||||||||| |  |||||||| ||||||||||||||||||||| ||||||||    
T  34574929 taccctctcttgtttggaaggtatttaccccttcaagatatcaaccaattaaaatgta 34574872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 15287474 - 15287529
Alignment:
Q  317 ctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||| |||||||  || ||| ||||||||||||||||||||||||    
T  15287474 ctctcttgtttagggagtatttactccctcatgatatcaaccaatcaaaatgtaat 15287529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 16922306 - 16922244
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  16922306 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 16922244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 17557584 - 17557646
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  17557584 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 17557646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 11837846 - 11837785
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  11837846 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 11837785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 14103797 - 14103858
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  14103797 ttaccctctcttgtttagagggtaatttaccctctcacgatatcaaccaatcaaaatgtaat 14103858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 23580091 - 23580152
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  23580091 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 23580152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 27438218 - 27438279
Alignment:
Q  312 ttaccctctcttgtttag-gggta-tttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||||||   ||| ||||||||||||||||||||||||    
T  27438218 ttaccctctcttgtttagagggtaatttatcttctcatgatatcaaccaatcaaaatgtaat 27438279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 27782272 - 27782333
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  27782272 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 27782333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 38932577 - 38932514
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  38932577 acattaccctctcttgtttagagggtatttactccttcaagatatcaaccaatcaaaatgtaat 38932514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 10455740 - 10455678
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaa 370  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  10455740 acattatcctctcttgtttagagggtatttatcccttcaagatatcaaccaattaaaatgtaa 10455678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 6319295 - 6319358
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||    
T  6319295 acattaccctctcttgtttagcggggatttaccccttcaaaatatcaaccaatcaaaatgtaat 6319358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 21178611 - 21178548
Alignment:
Q  309 acattaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||||||| ||||||||||||||    
T  21178611 acattaccctctcttgtttagagagtatttaccccttcaagatatcaactaatcaaaatgtaat 21178548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 24457853 - 24457916
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||| |||||||    
T  24457853 acattaccctctcttgtttagagggtatttaccccttcaagatattaaccaatcaagatgtaat 24457916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 24460853 - 24460792
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||||| |||||| |  |||||||||||||||||||||||||||||    
T  24460853 attaccctctcttgtttagggggtatttaccttttcaagatatcaaccaatcaaaatgtaat 24460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 7575686 - 7575624
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||||||| |||||| || |||| ||||||||||||||||||||||||    
T  7575686 acattaccctctcttgtttagggggtattta-cctttcatgatatcaaccaatcaaaatgtaat 7575624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 10454381 - 10454443
Alignment:
Q  311 attaccctctcttgtttagggg--tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||| ||||||||||||||||  ||||||||| |||||||||||||||||| ||||||||||    
T  10454381 attacactctcttgtttaggggggtatttatcctttcaagatatcaaccaattaaaatgtaat 10454443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 14452061 - 14452124
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||  |||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  14452061 acattaccctcatttgtttagagggtatttacccattcaagatatcaaccaatcaaaatgtaat 14452124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 518051 - 518112
Alignment:
Q  311 attaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| |||||||||||| ||||||| || ||||||||||||| |||||||||||||||    
T  518051 attaccctatcttgtttagggtgtatttaccctttcaagatatcaatcaatcaaaatgtaat 518112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 7296693 - 7296632
Alignment:
Q  311 attaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||| ||||||||||||||| ||||||||  ||||||||||||||| |||||||||||||||    
T  7296693 attatcctctcttgtttaggaggtatttactccttcaagatatcaatcaatcaaaatgtaat 7296632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 14454699 - 14454638
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||| ||||| ||||| |||||| || |||||||||||||||||||||||||||||    
T  14454699 attaccctcttttgttcagggggtatttaccctttcaagatatcaaccaatcaaaatgtaat 14454638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 20920004 - 20919943
Alignment:
Q  311 attaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||| ||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||    
T  20920004 attatcctctcttgtttaggaggtatttaccctttcaagatatcaactaatcaaaatgtaat 20919943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 27479198 - 27479137
Alignment:
Q  311 attaccctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||| | ||||||||| |||||||||| || |||||||||||||||||||||||||||||    
T  27479198 attaccttttcttgtttaaggggtatttaccctttcaagatatcaaccaatcaaaatgtaat 27479137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 39159856 - 39159917
Alignment:
Q  311 attaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| | ||||||| || || ||||||||||||||||||||||||||    
T  39159856 attaccctctcttgtttagagagtatttacccttttaagatatcaaccaatcaaaatgtaat 39159917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 39209338 - 39209277
Alignment:
Q  311 attaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| | ||||||| || || ||||||||||||||||||||||||||    
T  39209338 attaccctctcttgtttagagagtatttacccttttaagatatcaaccaatcaaaatgtaat 39209277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 2290396 - 2290456
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaa 370  Q
    ||||||||||||||||||| ||||||||| ||  ||| |||||||||||||||||||||||    
T  2290396 attaccctctcttgtttagagggtatttaccctctcatgatatcaaccaatcaaaatgtaa 2290456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 3753016 - 3753076
Alignment:
Q  311 attaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||| |||||||||||||||| ||  ||| ||||||||||||||| ||||||||    
T  3753016 attaccctctcctgtttaggggtatttaccctctcatgatatcaaccaatcataatgtaat 3753076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 21191912 - 21191852
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatccctt-caagatatcaaccaatcaaaatg 367  Q
    ||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||    
T  21191912 acattaccctctcttgtttagagggtattttaccctttcaagatatcaaccaatcaaaatg 21191852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 312 - 366
Target Start/End: Complemental strand, 24520534 - 24520479
Alignment:
Q  312 ttaccctctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaat 366  Q
    ||||||||||||||||| |||||||||| || |||||||||||||| |||||||||    
T  24520534 ttaccctctcttgtttatggggtatttacccgttcaagatatcaactaatcaaaat 24520479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 36603071 - 36603008
Alignment:
Q  309 acattaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||| ||||   ||||||||  |||||||||||||||||||||||||||||||    
T  36603071 acattaccctctcttatttaaaaggtatttactccttcaagatatcaaccaatcaaaatgtaat 36603008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 3849804 - 3849865
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||  |||||||||| |  ||| ||||||||||||||||||||||||    
T  3849804 attaccctctcttgtttaaagggtatttatactctcatgatatcaaccaatcaaaatgtaat 3849865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 6322478 - 6322417
Alignment:
Q  311 attaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| | ||||||| || || ||||||||||||||||||||| ||||    
T  6322478 attaccctctcttgtttagagagtatttacccttttaagatatcaaccaatcaaaatataat 6322417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 18248721 - 18248660
Alignment:
Q  311 attaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| |||||||||| | ||||||| |  |||||||||||||||||||||||||||||    
T  18248721 attaccctatcttgtttagagagtatttaccaattcaagatatcaaccaatcaaaatgtaat 18248660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 371
Target Start/End: Original strand, 20919109 - 20919165
Alignment:
Q  316 cctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||| ||||||||| | ||| |||||||||| |||||||||||||||    
T  20919109 cctctcttgtttagagggtatttacctctttaagatatcaatcaatcaaaatgtaat 20919165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 519753 - 519690
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||| ||||||||  | |||||| | ||| ||||||||||||||||||||||||||    
T  519753 acattaccctctattgtttagatgatatttacctctttaagatatcaaccaatcaaaatgtaat 519690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 33182908 - 33182845
Alignment:
Q  309 acattaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||| || |||||  |||||||| ||||| ||||||||||||||||||||| ||||    
T  33182908 acattaccctcttttatttagatggtatttacccctttaagatatcaaccaatcaaaatttaat 33182845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 1053146 - 1053207
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||| ||||||||||||| ||||||||| ||  ||| ||||||||| ||||||||||||||    
T  1053146 attactctctcttgtttagagggtatttaccctctcatgatatcaacaaatcaaaatgtaat 1053207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 15400981 - 15400920
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||| || |||||||||| ||||||||| ||  ||| ||||||||||||||||||||||||    
T  15400981 attactctatcttgtttagagggtatttaccctatcatgatatcaaccaatcaaaatgtaat 15400920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 38282463 - 38282402
Alignment:
Q  312 ttaccctctcttgtttag-gggta-tttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| |||||||  ||| |||||||| |||||||||||||||    
T  38282463 ttaccctctcttgtttagagggtaatttatcctctcatgatatcaatcaatcaaaatgtaat 38282402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 3907108 - 3907044
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||| ||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  3907108 acattacactctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 3907044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 350
Target Start/End: Original strand, 7294905 - 7294945
Alignment:
Q  311 attaccctctcttgtttaggg-gtatttatcccttcaagat 350  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  7294905 attaccctatcttgtttagggtgtatttatcccttcaagat 7294945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 14006253 - 14006189
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| || ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  14006253 acattaccctctcttgttaagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 14006189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 27551797 - 27551737
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||| ||  ||  ||||||||||||||||||||||||    
T  27551797 ttaccctctcttgtttagagggtaattaccctctcctgatatcaaccaatcaaaatgtaat 27551737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 371
Target Start/End: Original strand, 33178752 - 33178780
Alignment:
Q  343 ttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||||||||||||||    
T  33178752 ttcaagatatcaaccaatcaaaatgtaat 33178780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 31643083 - 31643025
Alignment:
Q  313 taccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||    
T  31643083 taccctctcttgcttaggggtatttaccctttcaagatatcaaccaatcaaaatgtaat 31643025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 35019245 - 35019306
Alignment:
Q  309 acattaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgta 369  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  35019245 acattaccctatcttatttagagggtatttatcccttcaagatatcaaccaatcaaaatgta 35019306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 29725498 - 29725561
Alignment:
Q  309 acattaccctctcttgt-ttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||| || ||||||||||||| || ||||||||||||||||||||||||||    
T  29725498 acattaccctctcttgtattgggggtatttatccttttaagatatcaaccaatcaaaatgtaat 29725561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 45407255 - 45407316
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||| |||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  45407255 attatcctctcttgtttagagggtatttaccccttcatgatatcaaccaatcaaaatgtaat 45407316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 26951350 - 26951290
Alignment:
Q  311 attaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| || |||||||||||||||| || || ||||||||||||||||||||||||||    
T  26951350 attaccctatcgtgtttaggggtatttacccttttaagatatcaaccaatcaaaatgtaat 26951290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 366
Target Start/End: Complemental strand, 17779513 - 17779464
Alignment:
Q  318 tctcttgttta-ggggtatttatcccttcaagatatcaaccaatcaaaat 366  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  17779513 tctcttgtttacggggtatttatcctttcaagatatcaaccaatcaaaat 17779464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 38576598 - 38576659
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||||||| ||  ||| ||||||||||||||||||||||||    
T  38576598 attaccctctcttgtttagagggtatttaccctctcatgatatcaaccaatcaaaatgtaat 38576659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 39860004 - 39859943
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||||||| ||  ||| ||||||||||||||||||||||||    
T  39860004 attaccctctcttgtttagagggtatttaccctctcatgatatcaaccaatcaaaatgtaat 39859943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 42647361 - 42647300
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||| |||||||| ||||||||| ||||||| ||||||||||||||||||| ||||    
T  42647361 attaccctctattgtttagagggtatttaccccttcatgatatcaaccaatcaaaatataat 42647300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 15825077 - 15825140
Alignment:
Q  309 acattaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||| ||||  || |||||| || |||||||||||||||||||||||||||||    
T  15825077 acattaccctctcttatttataggatatttaccctttcaagatatcaaccaatcaaaatgtaat 15825140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 39070366 - 39070303
Alignment:
Q  309 acattaccctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||| ||| |||||||||| | ||||||| || |||||||||||||||||||||||||||||    
T  39070366 acattatcctatcttgtttagagtgtatttaccctttcaagatatcaaccaatcaaaatgtaat 39070303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 15825969 - 15825915
Alignment:
Q  318 tctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||| || |||||| || |||||||||||||||||||||||||||||    
T  15825969 tctcttgtttagaggatatttaccctttcaagatatcaaccaatcaaaatgtaat 15825915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 39068843 - 39068902
Alignment:
Q  311 attaccctctcttgtttaggggta--tttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||||||  ||||||| |||   |||||||||||||||||||||||    
T  39068843 attaccctctcttgtttaggggtatttttatcctttc---atatcaaccaatcaaaatgtaat 39068902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 40618552 - 40618491
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| ||||||||||||| |||||| ||| ||| |||||||||||||||| |||||||    
T  40618552 attaccctatcttgtttagggggtatttaccccctcatgatatcaaccaatcaacatgtaat 40618491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 41671542 - 41671481
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| |||||||||  ||||||||| || ||||||||||||||||||||| |||||||    
T  41671542 attaccctatcttgtttatagggtatttaccctttcaagatatcaaccaatcaacatgtaat 41671481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 17948707 - 17948643
Alignment:
Q  309 acattaccctctcttgtttag-gggta-tttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||| ||||| |||||||  ||| ||||||||||||| ||||||||||    
T  17948707 acattaccctctcttgtttagagggtaatttatcctctcatgatatcaaccaattaaaatgtaat 17948643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 40302432 - 40302487
Alignment:
Q  317 ctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||||||| ||  ||| ||||||||||||||||||||||||    
T  40302432 ctctcttgtttagagggtatttaccctctcatgatatcaaccaatcaaaatgtaat 40302487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 16097670 - 16097608
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  16097670 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 16097608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 23345183 - 23345245
Alignment:
Q  311 attaccctctcttgtttag-gggtattt-atcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| |||||||| ||||  ||| ||||||||||||||||||||||||    
T  23345183 attaccctctcttatttagagggtattttatcctctcatgatatcaaccaatcaaaatgtaat 23345245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 26965376 - 26965438
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  26965376 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 26965438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 30112234 - 30112176
Alignment:
Q  314 accctctcttgtttaggg-gtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||||| ||  ||| |||||||| |||||||||||||||    
T  30112234 accctctcttgtttagggagtatttaccctctcatgatatcaatcaatcaaaatgtaat 30112176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 276587 - 276651
Alignment:
Q  309 acattaccctctcttgttta--ggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||  |||  ||||| ||  ||| ||||||||||||||||||||||||    
T  276587 acattaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 276651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 639262 - 639198
Alignment:
Q  309 acattaccctctcttgttta--ggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||  |||  ||||| ||  ||| ||||||||||||||||||||||||    
T  639262 acattaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 639198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 825068 - 825004
Alignment:
Q  309 acattaccctctcttgttta--ggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||||  |||  ||||| ||  ||| ||||||||||||||||||||||||    
T  825068 acattaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 825004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 19143262 - 19143201
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||| |||||||||||||||| |||||| || || ||||||| ||||||||||||| ||||    
T  19143262 attacgctctcttgtttagggggtatttacccttttaagatattaaccaatcaaaatataat 19143201  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 23627577 - 23627516
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||| ||||| ||||| || ||||||||| || ||||||||||| ||||||||||||||    
T  23627577 attaccccctcttatttagaggatatttatccttttaagatatcaacaaatcaaaatgtaat 23627516  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 25583812 - 25583751
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  25583812 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 25583751  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 27911894 - 27911955
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  27911894 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 27911955  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 27958313 - 27958374
Alignment:
Q  312 ttaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||  |||| ||| ||||||||||||||||||||||||    
T  27958313 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 27958374  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 38362426 - 38362487
Alignment:
Q  311 attaccctctcttgtttagggg-tatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| |  |||||| || ||||||||||||| |||||||||| ||||    
T  38362426 attaccctctcttgtttagagaatatttaccctttcaagatatcaatcaatcaaaatataat 38362487  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 26920619 - 26920560
Alignment:
Q  311 attaccctctcttgtttaggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||| || |||||||||||||||| || || ||||||| ||||||| ||||||||||    
T  26920619 attaccctatcgtgtttaggggtattta-ccttttaagatattaaccaattaaaatgtaat 26920560  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 41544849 - 41544909
Alignment:
Q  312 ttaccctctcttgtttagg-ggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||| ||||||||||  |||| ||||||  ||| ||||||||||||||||||||||||    
T  41544849 ttaccctatcttgtttagatggtaattatcctctcatgatatcaaccaatcaaaatgtaat 41544909  T

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Target: scaffold0208 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 3872 - 3933
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||||    
T  3872 attaccctctcttgtttagagggtatttaccccttcatgatatcaatcaatcaaaatgtaat 3933  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 94744 - 94683
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||| ||||||||||||| ||||||||| |  ||||||||||||| |||||||||||||||    
T  94744 attactctctcttgtttagagggtatttaccatttcaagatatcaatcaatcaaaatgtaat 94683  T

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Target: scaffold0779 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0779
Description:

Target: scaffold0779; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 205 - 143
Alignment:
Q  311 attaccctctcttgtttag-gggtatttatccct-tcaagatatcaaccaatcaaaatgtaat 371  Q
    ||||||||||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||||||    
T  205 attaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 143  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 49144 - 49083
Alignment:
Q  312 ttaccctctcttgtttag-gggta-tttatcccttcaagatatcaaccaatcaaaatgtaat 371  Q
    |||||||||||||||||| ||||| ||||||   ||| ||||||||||||||||||||||||    
T  49144 ttaccctctcttgtttagagggtaatttatcttctcatgatatcaaccaatcaaaatgtaat 49083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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