View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2621_high_13 (Length: 390)
Name: NF2621_high_13
Description: NF2621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2621_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 10 - 374
Target Start/End: Complemental strand, 10016186 - 10015821
Alignment:
| Q |
10 |
attattctaatttttagactttattggatgttttannnnnnnggtttaagtgatgaattatatttgtatctacacttgtttaatatgcaacaatgtggtt |
109 |
Q |
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| T |
10016186 |
attattctaatttttagactttattggatgttttatttttttggtttaagtgatgaattatatttgtatctacacttgtttaatatgcaacaatgtggtt |
10016087 |
T |
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| Q |
110 |
aattcagttgagtagttgaatgtcaatgaattaaacataattacaatgtggtgtaccaaaagtggatgttcatgaacttcatgtattattgaaatcatat |
209 |
Q |
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| T |
10016086 |
aattcagttgagtagttgaatgtcaatgaattaaacataattataatgtggtgtaccaaaagtggatgttcatgaacttcatgtattattgaaatcatat |
10015987 |
T |
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| Q |
210 |
gatacattctatgttgaaccaacacttcaaagtgggtgcttatatttaataac-nnnnnnnnngggtgtatgtgtcaatgttttgtctagtgttagcggt |
308 |
Q |
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| T |
10015986 |
gatacattctatgttgaaccaacacttcaaagtgggtgcttatatttaataacttttttttttgggtgtatgtgttaatgttttgtctagtgttagcggt |
10015887 |
T |
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| Q |
309 |
agtactatttgtacactcctgtgtaataggatggacaagttaatttcttcttacttaggtaataat |
374 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10015886 |
agtactatttgtacactcctgtgtaataggatggacaagttaatttcttcttacttaggtaataat |
10015821 |
T |
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