View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2621_high_25 (Length: 289)
Name: NF2621_high_25
Description: NF2621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2621_high_25 |
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Alignment Details
Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 708430 - 708700
Alignment:
| Q |
1 |
ataacatcagtggaaaagtcgtggaagttccttttctttttcattagcaccctagctaggacacttgatatgaaaccaacatttcattcttttggcgtga |
100 |
Q |
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| T |
708430 |
ataacatcagtggaaaagtcgtggaagttccttttctttttcattagcaccctag----gacacttgatatgaaaccaacatttcattctttggacgtga |
708525 |
T |
|
| Q |
101 |
tcaatgtgcttcagttagttgtagcttgttattggtggtgttgaat---agaagtacaaaggttgtaagaagtcatcagaatctttttataactgatagt |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| |
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| T |
708526 |
tcaatgtgcttcagttagttgtagcttgttattggtggtgttgaatagaagaagtac-aaggttgtaagaagtcatcagaatctttttagaactgatagt |
708624 |
T |
|
| Q |
198 |
ttaatannnnnnngtcctctatcatgttaatttttgtagcaacaatcttgtagaatactaacaacttcttccctttg |
274 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
708625 |
ttaata-ttttttgtcctctatcatgttaatttttgtagcaacaatcttgtagaatagtaacaacttcttccctttg |
708700 |
T |
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