View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2621_low_19 (Length: 333)
Name: NF2621_low_19
Description: NF2621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2621_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 153 - 316
Target Start/End: Original strand, 29574145 - 29574308
Alignment:
| Q |
153 |
tgaagaaagtatagaaatgcatagagatgtgagctcactgacctgaaaacgagagaagggtcttaagaaattccaccaagccatagttataagaagtttg |
252 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
29574145 |
tgaagaaagtatagaaatgcatagagatgtgagctcactgacctgaaaacgagagaagggtcttaagaaattccaccaagccatagttagaagaagtttg |
29574244 |
T |
|
| Q |
253 |
aagcagcaaagaaaaccattcaaagagattgaaaatgagacctgaaaaaggaaagaggtaaaat |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
29574245 |
aagcagcaaagaaaaccattcaaagagattgaaaatgagacctgaaaatggaaagaggtaaaat |
29574308 |
T |
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Target: chr7 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 153 - 316
Target Start/End: Complemental strand, 31696311 - 31696148
Alignment:
| Q |
153 |
tgaagaaagtatagaaatgcatagagatgtgagctcactgacctgaaaacgagagaagggtcttaagaaattccaccaagccatagttataagaagtttg |
252 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
31696311 |
tgaagaaagtatagaaatgcatagagatgtgagctcactgacctgaaaacgagagaagggtcttaagaaattccaccaagccatagttagaagaagtttg |
31696212 |
T |
|
| Q |
253 |
aagcagcaaagaaaaccattcaaagagattgaaaatgagacctgaaaaaggaaagaggtaaaat |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
31696211 |
aagcagcaaagaaaaccattcaaagagattgaaaatgagacctgaaaatggaaagaggtaaaat |
31696148 |
T |
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