View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2621_low_28 (Length: 271)
Name: NF2621_low_28
Description: NF2621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2621_low_28 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 14 - 255
Target Start/End: Complemental strand, 53701275 - 53701034
Alignment:
| Q |
14 |
gatcagaaaccttatgaagaaaaaatattggtgattatggctggacaagataaaccaacattcttagccacaccaagcatgtcttcaagcacaagtacta |
113 |
Q |
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| T |
53701275 |
gatcagaaaccgtatgaagaaaaaatattggtgattatggctggacaagataaaccaacattcttagccacaccaagcatgtcttcaagcacaagtacaa |
53701176 |
T |
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| Q |
114 |
gtactagtagatcctcttcttttggtgacaacactagtacttgtacttgtgaccatgacaaggaccagaaatcgatggaaaatatgaatgatgaagaatc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
53701175 |
gtactagtagatcctcttcttttggtgacaacactagtacttgtacttgtgaacatgacaaggaccagaaatcgatagaaaatatgaatgatgaagaatc |
53701076 |
T |
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| Q |
214 |
aaccgtgaaacaaggaagcggtggtggtgaaaatcatgtaag |
255 |
Q |
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|||||||||||||||| | ||||||||||||||||||||||| |
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| T |
53701075 |
aaccgtgaaacaaggagggggtggtggtgaaaatcatgtaag |
53701034 |
T |
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