View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2622_high_117 (Length: 222)
Name: NF2622_high_117
Description: NF2622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2622_high_117 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 14551277 - 14551057
Alignment:
| Q |
1 |
tgtaaagaaaaagaaaacatcagtgtcagtgcctggttccatccattgtcactactatgtcccaatccagaatcactccaagtccaagttcacattcaat |
100 |
Q |
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| T |
14551277 |
tgtaaagaaaaagaaaacatcagtgtcagtgcctggttccatccattgtcactactatgtcccaatccagaatcactccaagtccaagttcacattcaat |
14551178 |
T |
|
| Q |
101 |
caaattgtacgtaccaatttaccataccatcaatttctgaattcaaatttaccattacattttacttatttaaactatgtttacatttaatttgtgaaat |
200 |
Q |
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| T |
14551177 |
caaattgtacgtaccaatttaccataccatcaatttctgaattcaaatttaccattaca-tttacttatttaaactatgtttacatttaatttgtgaaat |
14551079 |
T |
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| Q |
201 |
gaagaccttgtaacatgccagt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
14551078 |
gaagaccttgtaacatgccagt |
14551057 |
T |
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