View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2622_high_50 (Length: 334)
Name: NF2622_high_50
Description: NF2622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2622_high_50 |
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Alignment Details
Target: chr3 (Bit Score: 119; Significance: 9e-61; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 25040320 - 25040173
Alignment:
| Q |
1 |
caaatctatataccaagattccgttccttaatatttagtttatctaaannnnnnngtatgcgatcaggagtattgacgtggatcctttgcattttattgt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25040320 |
caaatctatataccaagattccgttccttaatatttagtttatctagatttttttgtatgcgatcaggagtattgacgtggatcctttgcattttattgt |
25040221 |
T |
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| Q |
101 |
ttattcacgctaataaagtcagcacaggtatatagaaatgctagatgg |
148 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
25040220 |
ttattcacgctaataaagtcagcataggtatatagaaatgctagatgg |
25040173 |
T |
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