View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2622_high_56 (Length: 312)
Name: NF2622_high_56
Description: NF2622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2622_high_56 |
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Alignment Details
Target: chr8 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 36885627 - 36885699
Alignment:
| Q |
135 |
tactattatctcaaatcaccatccagagtacaatctacttattttatatgaatcttcaggataatcaactagc |
207 |
Q |
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| T |
36885627 |
tactattatctcaaatcaccatccaaagtacaatctacttattttatatgaatcttcaggataatcaactagc |
36885699 |
T |
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Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 36885738 - 36885790
Alignment:
| Q |
245 |
tgagaagtgttggaaattaccaggaagtcatggtcgatgggtggaggagaaag |
297 |
Q |
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| T |
36885738 |
tgagaagtgttggaaattaccaggaagtcatggtcgatgggtggaggagaaag |
36885790 |
T |
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